Miyakogusa Predicted Gene
- Lj1g3v4753100.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj1g3v4753100.1 Non Characterized Hit- tr|A9NZD4|A9NZD4_PICSI
Putative uncharacterized protein OS=Picea sitchensis
P,79.25,0.000000000000001,FAS1,FAS1 domain; FAS1 domain,FAS1 domain;
SUBFAMILY NOT NAMED,NULL; FAMILY NOT NAMED,NULL;
seg,NULL,NODE_28953_length_752_cov_381.132965.path1.1
(219 letters)
Database: Medicago_aa4.0v1
62,319 sequences; 21,947,249 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Medtr7g106760.2 | fasciclin-like arabinogalactan protein 16 prec... 301 3e-82
Medtr7g106760.1 | fasciclin-like arabinogalactan protein 16 prec... 301 3e-82
Medtr7g106760.3 | fasciclin-like arabinogalactan protein 16 prec... 301 3e-82
Medtr4g050170.1 | fasciclin-like arabinogalactan protein 16 prec... 257 5e-69
Medtr2g087810.1 | fasciclin-like arabinogalactan protein 16 prec... 224 4e-59
>Medtr7g106760.2 | fasciclin-like arabinogalactan protein 16
precursor | HC | chr7:43481765-43478342 | 20130731
Length = 448
Score = 301 bits (771), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 155/219 (70%), Positives = 170/219 (77%), Gaps = 2/219 (0%)
Query: 1 MSHILPARISDHNFPATDRRHRTLSPDHHLNLATNPTSGKKTVDSAEILRPNDVLRPDGV 60
MSHILP+RI+ H++P T H TLS +H L+L TNPT G KTVDSAEIL+P+DV+RPDGV
Sbjct: 107 MSHILPSRIASHHWPPTHLHHHTLS-NHRLHLTTNPT-GAKTVDSAEILKPDDVIRPDGV 164
Query: 61 IHGIDSLIVPRSVQEDFNRRRSLRAISAVLPEGAPQVDPRTNRXXXXXXXXXXXXXXXXI 120
IHGI LI+PRSVQEDFNRRR+LR ISA+LPEGAP+VDPRTNR I
Sbjct: 165 IHGIQRLIIPRSVQEDFNRRRNLRDISAILPEGAPEVDPRTNRLKKPAPVPAGAPPVLPI 224
Query: 121 YDXXXXXXXXXXXXXXXXXXXRHHFNGEKQVKDFIQTLVHYGGYNEMADILVNLTSLATE 180
YD RHHFNGE+QVKDFIQTL+HYGGYNEMADILVNLTSLATE
Sbjct: 225 YDALAPGPSLAPAPAPGPGGPRHHFNGERQVKDFIQTLLHYGGYNEMADILVNLTSLATE 284
Query: 181 MGRLVSEGYVLTVLAPNDEAMAKLTTDQLSEPGAPEQII 219
MGRLVSEGYVLTVLAPNDEAMAKLTTDQLSEPGAPEQII
Sbjct: 285 MGRLVSEGYVLTVLAPNDEAMAKLTTDQLSEPGAPEQII 323
>Medtr7g106760.1 | fasciclin-like arabinogalactan protein 16
precursor | HC | chr7:43481515-43477779 | 20130731
Length = 448
Score = 301 bits (771), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 155/219 (70%), Positives = 170/219 (77%), Gaps = 2/219 (0%)
Query: 1 MSHILPARISDHNFPATDRRHRTLSPDHHLNLATNPTSGKKTVDSAEILRPNDVLRPDGV 60
MSHILP+RI+ H++P T H TLS +H L+L TNPT G KTVDSAEIL+P+DV+RPDGV
Sbjct: 107 MSHILPSRIASHHWPPTHLHHHTLS-NHRLHLTTNPT-GAKTVDSAEILKPDDVIRPDGV 164
Query: 61 IHGIDSLIVPRSVQEDFNRRRSLRAISAVLPEGAPQVDPRTNRXXXXXXXXXXXXXXXXI 120
IHGI LI+PRSVQEDFNRRR+LR ISA+LPEGAP+VDPRTNR I
Sbjct: 165 IHGIQRLIIPRSVQEDFNRRRNLRDISAILPEGAPEVDPRTNRLKKPAPVPAGAPPVLPI 224
Query: 121 YDXXXXXXXXXXXXXXXXXXXRHHFNGEKQVKDFIQTLVHYGGYNEMADILVNLTSLATE 180
YD RHHFNGE+QVKDFIQTL+HYGGYNEMADILVNLTSLATE
Sbjct: 225 YDALAPGPSLAPAPAPGPGGPRHHFNGERQVKDFIQTLLHYGGYNEMADILVNLTSLATE 284
Query: 181 MGRLVSEGYVLTVLAPNDEAMAKLTTDQLSEPGAPEQII 219
MGRLVSEGYVLTVLAPNDEAMAKLTTDQLSEPGAPEQII
Sbjct: 285 MGRLVSEGYVLTVLAPNDEAMAKLTTDQLSEPGAPEQII 323
>Medtr7g106760.3 | fasciclin-like arabinogalactan protein 16
precursor | HC | chr7:43481765-43477708 | 20130731
Length = 448
Score = 301 bits (771), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 155/219 (70%), Positives = 170/219 (77%), Gaps = 2/219 (0%)
Query: 1 MSHILPARISDHNFPATDRRHRTLSPDHHLNLATNPTSGKKTVDSAEILRPNDVLRPDGV 60
MSHILP+RI+ H++P T H TLS +H L+L TNPT G KTVDSAEIL+P+DV+RPDGV
Sbjct: 107 MSHILPSRIASHHWPPTHLHHHTLS-NHRLHLTTNPT-GAKTVDSAEILKPDDVIRPDGV 164
Query: 61 IHGIDSLIVPRSVQEDFNRRRSLRAISAVLPEGAPQVDPRTNRXXXXXXXXXXXXXXXXI 120
IHGI LI+PRSVQEDFNRRR+LR ISA+LPEGAP+VDPRTNR I
Sbjct: 165 IHGIQRLIIPRSVQEDFNRRRNLRDISAILPEGAPEVDPRTNRLKKPAPVPAGAPPVLPI 224
Query: 121 YDXXXXXXXXXXXXXXXXXXXRHHFNGEKQVKDFIQTLVHYGGYNEMADILVNLTSLATE 180
YD RHHFNGE+QVKDFIQTL+HYGGYNEMADILVNLTSLATE
Sbjct: 225 YDALAPGPSLAPAPAPGPGGPRHHFNGERQVKDFIQTLLHYGGYNEMADILVNLTSLATE 284
Query: 181 MGRLVSEGYVLTVLAPNDEAMAKLTTDQLSEPGAPEQII 219
MGRLVSEGYVLTVLAPNDEAMAKLTTDQLSEPGAPEQII
Sbjct: 285 MGRLVSEGYVLTVLAPNDEAMAKLTTDQLSEPGAPEQII 323
>Medtr4g050170.1 | fasciclin-like arabinogalactan protein 16
precursor | HC | chr4:17747502-17752074 | 20130731
Length = 466
Score = 257 bits (657), Expect = 5e-69, Method: Compositional matrix adjust.
Identities = 134/221 (60%), Positives = 157/221 (71%), Gaps = 2/221 (0%)
Query: 1 MSHILPARISDHNFPAT-DRRHRTLSPDHHLNLATNPTSGKKTVDSAEILRPNDVLRPDG 59
MSHI+P RI+ T RHRTLS +H + + +N TS + V+ A+I+ NDV RPDG
Sbjct: 117 MSHIIPTRINGSVSSKTGSTRHRTLSLEHKIVIQSNETSQQWLVNGAKIVHLNDVTRPDG 176
Query: 60 VIHGIDSLIVPRSVQEDFNRRRSLRAISAVLPEGAPQVDPRTNRXXXXXXXXXXXXXXXX 119
VIHGI+ L++PRSVQ+DFNRRRSL +I+A+ PEGAP+VDPRT+R
Sbjct: 177 VIHGIERLLIPRSVQDDFNRRRSLVSIAAIKPEGAPEVDPRTHRLKKPPPPQNPGSPPAL 236
Query: 120 -IYDXXXXXXXXXXXXXXXXXXXRHHFNGEKQVKDFIQTLVHYGGYNEMADILVNLTSLA 178
I+D HHFNGE QVKDFIQTL+HYGGYNEMADILVNLTSLA
Sbjct: 237 PIFDALAPGPSLAPAPAPGPGGPHHHFNGEAQVKDFIQTLIHYGGYNEMADILVNLTSLA 296
Query: 179 TEMGRLVSEGYVLTVLAPNDEAMAKLTTDQLSEPGAPEQII 219
TEM RLVSEGYVLTVLAPNDEAMAKLTTDQLSEPG+PEQI+
Sbjct: 297 TEMSRLVSEGYVLTVLAPNDEAMAKLTTDQLSEPGSPEQIM 337
>Medtr2g087810.1 | fasciclin-like arabinogalactan protein 16
precursor | HC | chr2:36956273-36953488 | 20130731
Length = 446
Score = 224 bits (571), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 116/219 (52%), Positives = 148/219 (67%), Gaps = 8/219 (3%)
Query: 1 MSHILPARISDHNFPATDRRHRTLSPDHHLNLATNPTSGKKTVDSAEILRPNDVLRPDGV 60
+SH++P RI + R +++S D+HL+L TN T+G+ V+ + PND+ RPDGV
Sbjct: 104 LSHVIPTRIQ-----SGSTRFKSIS-DYHLHLETNTTTGEFMVNQENVTHPNDITRPDGV 157
Query: 61 IHGIDSLIVPRSVQEDFNRRRSLRAISAVLPEGAPQVDPRTNRXXXXXXXXXXXXXXXXI 120
IHGI +++PR+V +DFN RRSL +I+AV PEGAP+ D R + I
Sbjct: 158 IHGIQKILIPRAVVDDFNNRRSLSSITAVKPEGAPEADTR--KLKKSSPEKPGSPPEIPI 215
Query: 121 YDXXXXXXXXXXXXXXXXXXXRHHFNGEKQVKDFIQTLVHYGGYNEMADILVNLTSLATE 180
Y+ HHFNG+ QVKDFI+TL+HYGGY EMADILVNLTSLATE
Sbjct: 216 YEALAPGPSLAPAPAPGPGGPHHHFNGDLQVKDFIKTLLHYGGYKEMADILVNLTSLATE 275
Query: 181 MGRLVSEGYVLTVLAPNDEAMAKLTTDQLSEPGAPEQII 219
M RLVSEGYVLTVLAPNDEAMAKLTT++LSEPG+PE+I+
Sbjct: 276 MSRLVSEGYVLTVLAPNDEAMAKLTTEELSEPGSPEEIM 314