Miyakogusa Predicted Gene

Lj1g3v4752960.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v4752960.1 Non Characterized Hit- tr|I1NAW2|I1NAW2_SOYBN
Uncharacterized protein OS=Glycine max PE=4
SV=1,38.85,2e-18,seg,NULL,CUFF.33115.1
         (200 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr7g106660.1 | Mal D 1-associated protein | HC | chr7:4342825...   199   2e-51

>Medtr7g106660.1 | Mal D 1-associated protein | HC |
           chr7:43428257-43431689 | 20130731
          Length = 187

 Score =  199 bits (505), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 102/203 (50%), Positives = 124/203 (61%), Gaps = 19/203 (9%)

Query: 1   MGWVWSXXXXXXXXXXXQIIXXXXXXXXXXXXXXXXXXKRIVRSQCRTEQVESGKFIRKC 60
           MGWVWS           +                    +++V+SQC+TE+VE GKF+RKC
Sbjct: 1   MGWVWSDDDNNSSSGSDE----------------RCSTRKVVKSQCKTEEVEPGKFVRKC 44

Query: 61  EKTEELIRICVGRPVEVLQSNNEYXXXXXXXXXXKXXXXXXXXXXXXXXXHVFDFPGLRS 120
           EKTEEL++ C G+PVEVLQSN EY          +                VF+FPGLRS
Sbjct: 45  EKTEELLKTCAGKPVEVLQSNKEYTEEDITSEVLRGGSTTFGSSNSSSDHGVFNFPGLRS 104

Query: 121 DIEVMERSLFGGVSRFFDAAEEMKNGFFDVFG---NVLDAESPSSSSMRRGIPIEEYNRQ 177
           DIEVMERSLFGG+ RFF+AAEEMKNG FDV     ++ DAE PSSS MR+GIPIE+  RQ
Sbjct: 105 DIEVMERSLFGGLGRFFEAAEEMKNGLFDVIAKSPSIFDAEMPSSSRMRQGIPIEDNGRQ 164

Query: 178 EASPKPQEKEPVDTDFAALAKDV 200
           E  PK ++ E  DTDF+ALAKDV
Sbjct: 165 ETRPKSKDMESADTDFSALAKDV 187