Miyakogusa Predicted Gene

Lj1g3v4752830.1
Show Alignment: 
BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v4752830.1 tr|G7KD19|G7KD19_MEDTR Anaphase-promoting complex
subunit OS=Medicago truncatula GN=MTR_5g091030
PE=,81.03,1e-18,SUBFAMILY NOT NAMED,NULL; FAMILY NOT
NAMED,NULL,BP035449.path1.1
         (105 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr5g091020.1 | anaphase-promoting complex subunit 5 | HC | ch...   184   1e-47

>Medtr5g091020.1 | anaphase-promoting complex subunit 5 | HC |
           chr5:39660837-39673775 | 20130731
          Length = 922

 Score =  184 bits (468), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 88/105 (83%), Positives = 95/105 (90%)

Query: 1   MILGHGGLELRSRAYIVEAKCYLCNTNFNIFEDYNIVIDPLRQASEELQLLEFHELAAEA 60
           +ILGHGGLELRSRAYIVEAKCYLC+TNFN+ EDYN VID L+QASEELQ LEFHELAAEA
Sbjct: 818 IILGHGGLELRSRAYIVEAKCYLCDTNFNVGEDYNFVIDSLKQASEELQPLEFHELAAEA 877

Query: 61  FYLMAMVYDKLGQYEEREEAAASFQKHTLALDNPQDQDDPLISTF 105
           FYLMAMVYDKLGQ EEREEAA SFQKH LAL+N QD DDPL+S +
Sbjct: 878 FYLMAMVYDKLGQLEEREEAATSFQKHILALNNLQDHDDPLVSIY 922