Miyakogusa Predicted Gene
- Lj1g3v4752830.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj1g3v4752830.1 tr|G7KD19|G7KD19_MEDTR Anaphase-promoting complex
subunit OS=Medicago truncatula GN=MTR_5g091030
PE=,81.03,1e-18,SUBFAMILY NOT NAMED,NULL; FAMILY NOT
NAMED,NULL,BP035449.path1.1
(105 letters)
Database: Medicago_aa4.0v1
62,319 sequences; 21,947,249 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Medtr5g091020.1 | anaphase-promoting complex subunit 5 | HC | ch... 184 1e-47
>Medtr5g091020.1 | anaphase-promoting complex subunit 5 | HC |
chr5:39660837-39673775 | 20130731
Length = 922
Score = 184 bits (468), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 88/105 (83%), Positives = 95/105 (90%)
Query: 1 MILGHGGLELRSRAYIVEAKCYLCNTNFNIFEDYNIVIDPLRQASEELQLLEFHELAAEA 60
+ILGHGGLELRSRAYIVEAKCYLC+TNFN+ EDYN VID L+QASEELQ LEFHELAAEA
Sbjct: 818 IILGHGGLELRSRAYIVEAKCYLCDTNFNVGEDYNFVIDSLKQASEELQPLEFHELAAEA 877
Query: 61 FYLMAMVYDKLGQYEEREEAAASFQKHTLALDNPQDQDDPLISTF 105
FYLMAMVYDKLGQ EEREEAA SFQKH LAL+N QD DDPL+S +
Sbjct: 878 FYLMAMVYDKLGQLEEREEAATSFQKHILALNNLQDHDDPLVSIY 922