Miyakogusa Predicted Gene
- Lj1g3v4727880.2
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj1g3v4727880.2 Non Characterized Hit- tr|I1NAS0|I1NAS0_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.7035
PE=,85.99,0,TLD,TLDc; SUBFAMILY NOT NAMED,NULL; NUCLEOLAR PROTEIN
7/ESTROGEN RECEPTOR COACTIVATOR-RELATED,NULL; ,CUFF.33046.2
(223 letters)
Database: Medicago_aa4.0v1
62,319 sequences; 21,947,249 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Medtr7g105640.1 | TLD-domain nucleolar protein | HC | chr7:42847... 390 e-109
Medtr7g105640.2 | TLD-domain nucleolar protein | HC | chr7:42847... 389 e-109
Medtr8g090235.1 | TLD-domain nucleolar protein | HC | chr8:37877... 67 2e-11
Medtr1g073340.1 | oxidation resistance-like protein | HC | chr1:... 67 2e-11
Medtr3g087230.2 | TLD-domain nucleolar protein | HC | chr3:39550... 64 1e-10
Medtr3g087230.1 | TLD-domain nucleolar protein | HC | chr3:39550... 64 1e-10
Medtr8g090235.2 | TLD-domain nucleolar protein | HC | chr8:37877... 60 1e-09
Medtr1g044690.1 | oxidation resistance-like protein | LC | chr1:... 54 1e-07
>Medtr7g105640.1 | TLD-domain nucleolar protein | HC |
chr7:42847555-42843000 | 20130731
Length = 421
Score = 390 bits (1002), Expect = e-109, Method: Compositional matrix adjust.
Identities = 179/207 (86%), Positives = 193/207 (93%)
Query: 17 GRPGSQIPKLLTSKGVDSNITLLREEYAWHIGGALSQQELEDWKILYHSAVNGLSFNTFL 76
GRPG+QIP LLT K +DSNI LLR+EYAWHIGGALSQ ELEDW +LYHS+VNGLSFNTFL
Sbjct: 197 GRPGTQIPNLLTPKDIDSNIVLLRKEYAWHIGGALSQHELEDWMLLYHSSVNGLSFNTFL 256
Query: 77 GNISSHEGPTVLIIKDTEGYIYGGYASQPWERHAEFYGDMKSYLFQLYPKASIFRPTGAN 136
GNIS+HEGPTVLI+KD +GYIYGGYASQ WERHAEFYGDMK Y+FQL PKASIFRPTGAN
Sbjct: 257 GNISNHEGPTVLILKDKDGYIYGGYASQQWERHAEFYGDMKCYIFQLNPKASIFRPTGAN 316
Query: 137 NNLQWCAANFSSEDIPNGIGFGGRVHHFGLFISANFDQGHTFSCSTFGSPCLTKTNRILP 196
NLQWCA NFSSE+IPNGIGFGGR +HFGLFISANFDQGHTFSCSTFGSPCL+KTNRI+P
Sbjct: 317 TNLQWCAVNFSSEEIPNGIGFGGRENHFGLFISANFDQGHTFSCSTFGSPCLSKTNRIVP 376
Query: 197 EVIECWGVTQGAVQGKNDAVKGTILER 223
EVIECWGVTQG VQGKNDAVKGT+LER
Sbjct: 377 EVIECWGVTQGVVQGKNDAVKGTVLER 403
>Medtr7g105640.2 | TLD-domain nucleolar protein | HC |
chr7:42847488-42843003 | 20130731
Length = 357
Score = 389 bits (1000), Expect = e-109, Method: Compositional matrix adjust.
Identities = 179/207 (86%), Positives = 193/207 (93%)
Query: 17 GRPGSQIPKLLTSKGVDSNITLLREEYAWHIGGALSQQELEDWKILYHSAVNGLSFNTFL 76
GRPG+QIP LLT K +DSNI LLR+EYAWHIGGALSQ ELEDW +LYHS+VNGLSFNTFL
Sbjct: 133 GRPGTQIPNLLTPKDIDSNIVLLRKEYAWHIGGALSQHELEDWMLLYHSSVNGLSFNTFL 192
Query: 77 GNISSHEGPTVLIIKDTEGYIYGGYASQPWERHAEFYGDMKSYLFQLYPKASIFRPTGAN 136
GNIS+HEGPTVLI+KD +GYIYGGYASQ WERHAEFYGDMK Y+FQL PKASIFRPTGAN
Sbjct: 193 GNISNHEGPTVLILKDKDGYIYGGYASQQWERHAEFYGDMKCYIFQLNPKASIFRPTGAN 252
Query: 137 NNLQWCAANFSSEDIPNGIGFGGRVHHFGLFISANFDQGHTFSCSTFGSPCLTKTNRILP 196
NLQWCA NFSSE+IPNGIGFGGR +HFGLFISANFDQGHTFSCSTFGSPCL+KTNRI+P
Sbjct: 253 TNLQWCAVNFSSEEIPNGIGFGGRENHFGLFISANFDQGHTFSCSTFGSPCLSKTNRIVP 312
Query: 197 EVIECWGVTQGAVQGKNDAVKGTILER 223
EVIECWGVTQG VQGKNDAVKGT+LER
Sbjct: 313 EVIECWGVTQGVVQGKNDAVKGTVLER 339
>Medtr8g090235.1 | TLD-domain nucleolar protein | HC |
chr8:37877746-37873858 | 20130731
Length = 356
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 38/150 (25%), Positives = 71/150 (47%), Gaps = 12/150 (8%)
Query: 57 EDWKILYHSAVNGLSFNTFLGNISSHEGPTVLIIKDTEGYIYGGYASQPWE--RHAEFYG 114
+ W ++Y + +G+S +T GP++L++ D +G ++GG P ++ G
Sbjct: 192 KKWLMMYSTWKHGISLSTLYRRSMLWPGPSLLVVGDRKGAVFGGLVEAPLRPSNKRKYQG 251
Query: 115 DMKSYLF-QLYPKASIFRPTGANNNLQWCAANFSSEDIPNGIGFGGRVHHFGLFISANFD 173
+++F + ++RPTG N C +F + IG GG HF L++ +
Sbjct: 252 TNSTFVFTNISGHPVVYRPTGVNRYFTLCTTDFLA------IGGGG---HFALYLEGDLL 302
Query: 174 QGHTFSCSTFGSPCLTKTNRILPEVIECWG 203
G + T+G+PCL + + +E WG
Sbjct: 303 NGSSSVSETYGNPCLAHSPEFQVKEVELWG 332
>Medtr1g073340.1 | oxidation resistance-like protein | HC |
chr1:32545325-32549403 | 20130731
Length = 313
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 42/152 (27%), Positives = 71/152 (46%), Gaps = 12/152 (7%)
Query: 59 WKILYHSAVNGLSFNTFLGNISSHEGPTVLIIKDTEGYIYGGYASQPWE--RHAEFYGDM 116
W +LY + +G+S T + + GP +LI+ D +G ++GG P + ++ G
Sbjct: 168 WVLLYSTLKHGISLRTLIRKSAELSGPALLIVGDRQGAVFGGLLDCPLKPTPKRKYQGTN 227
Query: 117 KSYLF-QLYPKASIFRPTGANNNLQWCAANFSSEDIPNGIGFGGRVHHFGLFISANFDQG 175
++++F +Y + +FRPTGAN C N + G +F L + + G
Sbjct: 228 QTFVFTTVYGQPRLFRPTGANRYYYMCL---------NDLLGLGGGGNFALCLDGDLLTG 278
Query: 176 HTFSCSTFGSPCLTKTNRILPEVIECWGVTQG 207
+ C TFG+ CL + + IE WG T
Sbjct: 279 TSGPCDTFGNQCLAHSPEFELKNIELWGFTHA 310
>Medtr3g087230.2 | TLD-domain nucleolar protein | HC |
chr3:39550456-39547457 | 20130731
Length = 371
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 39/148 (26%), Positives = 70/148 (47%), Gaps = 12/148 (8%)
Query: 59 WKILYHSAVNGLSFNTFLGNISSHEGPTVLIIKDTEGYIYGGYASQPWERHAE--FYGDM 116
W +LY + NG+S +T G ++L++ D +G ++G P + ++ + G
Sbjct: 209 WLLLYSTWRNGISLSTLYRRSMLWPGLSLLVVGDKKGAVFGSLVETPLKPSSKRKYQGTN 268
Query: 117 KSYLF-QLYPKASIFRPTGANNNLQWCAANFSSEDIPNGIGFGGRVHHFGLFISANFDQG 175
+Y+F + + I+ PTG N C ++ + IG GG HF L++ + G
Sbjct: 269 STYVFSNISGRPIIYHPTGVNRYFTLCNTDYIA------IGGGG---HFALYLDGDLLNG 319
Query: 176 HTFSCSTFGSPCLTKTNRILPEVIECWG 203
+ TFG+PCL + + +E WG
Sbjct: 320 SSSVSETFGNPCLANSQDFEVKEVELWG 347
>Medtr3g087230.1 | TLD-domain nucleolar protein | HC |
chr3:39550451-39547457 | 20130731
Length = 372
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 39/148 (26%), Positives = 70/148 (47%), Gaps = 12/148 (8%)
Query: 59 WKILYHSAVNGLSFNTFLGNISSHEGPTVLIIKDTEGYIYGGYASQPWERHAE--FYGDM 116
W +LY + NG+S +T G ++L++ D +G ++G P + ++ + G
Sbjct: 210 WLLLYSTWRNGISLSTLYRRSMLWPGLSLLVVGDKKGAVFGSLVETPLKPSSKRKYQGTN 269
Query: 117 KSYLF-QLYPKASIFRPTGANNNLQWCAANFSSEDIPNGIGFGGRVHHFGLFISANFDQG 175
+Y+F + + I+ PTG N C ++ + IG GG HF L++ + G
Sbjct: 270 STYVFSNISGRPIIYHPTGVNRYFTLCNTDYIA------IGGGG---HFALYLDGDLLNG 320
Query: 176 HTFSCSTFGSPCLTKTNRILPEVIECWG 203
+ TFG+PCL + + +E WG
Sbjct: 321 SSSVSETFGNPCLANSQDFEVKEVELWG 348
>Medtr8g090235.2 | TLD-domain nucleolar protein | HC |
chr8:37877746-37873858 | 20130731
Length = 360
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 35/135 (25%), Positives = 65/135 (48%), Gaps = 12/135 (8%)
Query: 57 EDWKILYHSAVNGLSFNTFLGNISSHEGPTVLIIKDTEGYIYGGYASQPWE--RHAEFYG 114
+ W ++Y + +G+S +T GP++L++ D +G ++GG P ++ G
Sbjct: 192 KKWLMMYSTWKHGISLSTLYRRSMLWPGPSLLVVGDRKGAVFGGLVEAPLRPSNKRKYQG 251
Query: 115 DMKSYLF-QLYPKASIFRPTGANNNLQWCAANFSSEDIPNGIGFGGRVHHFGLFISANFD 173
+++F + ++RPTG N C +F + IG GG HF L++ +
Sbjct: 252 TNSTFVFTNISGHPVVYRPTGVNRYFTLCTTDFLA------IGGGG---HFALYLEGDLL 302
Query: 174 QGHTFSCSTFGSPCL 188
G + T+G+PCL
Sbjct: 303 NGSSSVSETYGNPCL 317
>Medtr1g044690.1 | oxidation resistance-like protein | LC |
chr1:16875077-16879347 | 20130731
Length = 295
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 40/151 (26%), Positives = 65/151 (43%), Gaps = 12/151 (7%)
Query: 61 ILYHSAVNGLSFNTFLGNISSHEGPTVLIIKDTEGYIYGGYASQPW--ERHAEFYGDMKS 118
+LY + +G+S T + N S P +LI+ D +G ++G P ++ G ++
Sbjct: 153 LLYSTLKHGISLRTLIRNSSQLTTPGLLIVGDMKGAVFGALLDCPLIPTTRPKYQGTHQT 212
Query: 119 YLF-QLYPKASIFRPTGANNNLQWCAANFSSEDIPNGIGFGGRVHHFGLFISANFDQGHT 177
++F L IFRPTG N C+ N G F L++ + G +
Sbjct: 213 FVFTNLDSHPRIFRPTGVNRYYYLCS---------NDSFAFGGGGGFALYLDGDLLTGTS 263
Query: 178 FSCSTFGSPCLTKTNRILPEVIECWGVTQGA 208
C TF + CL T + +E WG T +
Sbjct: 264 GPCDTFENHCLAHTPEFEIKNVELWGFTHTS 294