Miyakogusa Predicted Gene

Lj1g3v4727880.2
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v4727880.2 Non Characterized Hit- tr|I1NAS0|I1NAS0_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.7035
PE=,85.99,0,TLD,TLDc; SUBFAMILY NOT NAMED,NULL; NUCLEOLAR PROTEIN
7/ESTROGEN RECEPTOR COACTIVATOR-RELATED,NULL; ,CUFF.33046.2
         (223 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr7g105640.1 | TLD-domain nucleolar protein | HC | chr7:42847...   390   e-109
Medtr7g105640.2 | TLD-domain nucleolar protein | HC | chr7:42847...   389   e-109
Medtr8g090235.1 | TLD-domain nucleolar protein | HC | chr8:37877...    67   2e-11
Medtr1g073340.1 | oxidation resistance-like protein | HC | chr1:...    67   2e-11
Medtr3g087230.2 | TLD-domain nucleolar protein | HC | chr3:39550...    64   1e-10
Medtr3g087230.1 | TLD-domain nucleolar protein | HC | chr3:39550...    64   1e-10
Medtr8g090235.2 | TLD-domain nucleolar protein | HC | chr8:37877...    60   1e-09
Medtr1g044690.1 | oxidation resistance-like protein | LC | chr1:...    54   1e-07

>Medtr7g105640.1 | TLD-domain nucleolar protein | HC |
           chr7:42847555-42843000 | 20130731
          Length = 421

 Score =  390 bits (1002), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 179/207 (86%), Positives = 193/207 (93%)

Query: 17  GRPGSQIPKLLTSKGVDSNITLLREEYAWHIGGALSQQELEDWKILYHSAVNGLSFNTFL 76
           GRPG+QIP LLT K +DSNI LLR+EYAWHIGGALSQ ELEDW +LYHS+VNGLSFNTFL
Sbjct: 197 GRPGTQIPNLLTPKDIDSNIVLLRKEYAWHIGGALSQHELEDWMLLYHSSVNGLSFNTFL 256

Query: 77  GNISSHEGPTVLIIKDTEGYIYGGYASQPWERHAEFYGDMKSYLFQLYPKASIFRPTGAN 136
           GNIS+HEGPTVLI+KD +GYIYGGYASQ WERHAEFYGDMK Y+FQL PKASIFRPTGAN
Sbjct: 257 GNISNHEGPTVLILKDKDGYIYGGYASQQWERHAEFYGDMKCYIFQLNPKASIFRPTGAN 316

Query: 137 NNLQWCAANFSSEDIPNGIGFGGRVHHFGLFISANFDQGHTFSCSTFGSPCLTKTNRILP 196
            NLQWCA NFSSE+IPNGIGFGGR +HFGLFISANFDQGHTFSCSTFGSPCL+KTNRI+P
Sbjct: 317 TNLQWCAVNFSSEEIPNGIGFGGRENHFGLFISANFDQGHTFSCSTFGSPCLSKTNRIVP 376

Query: 197 EVIECWGVTQGAVQGKNDAVKGTILER 223
           EVIECWGVTQG VQGKNDAVKGT+LER
Sbjct: 377 EVIECWGVTQGVVQGKNDAVKGTVLER 403


>Medtr7g105640.2 | TLD-domain nucleolar protein | HC |
           chr7:42847488-42843003 | 20130731
          Length = 357

 Score =  389 bits (1000), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 179/207 (86%), Positives = 193/207 (93%)

Query: 17  GRPGSQIPKLLTSKGVDSNITLLREEYAWHIGGALSQQELEDWKILYHSAVNGLSFNTFL 76
           GRPG+QIP LLT K +DSNI LLR+EYAWHIGGALSQ ELEDW +LYHS+VNGLSFNTFL
Sbjct: 133 GRPGTQIPNLLTPKDIDSNIVLLRKEYAWHIGGALSQHELEDWMLLYHSSVNGLSFNTFL 192

Query: 77  GNISSHEGPTVLIIKDTEGYIYGGYASQPWERHAEFYGDMKSYLFQLYPKASIFRPTGAN 136
           GNIS+HEGPTVLI+KD +GYIYGGYASQ WERHAEFYGDMK Y+FQL PKASIFRPTGAN
Sbjct: 193 GNISNHEGPTVLILKDKDGYIYGGYASQQWERHAEFYGDMKCYIFQLNPKASIFRPTGAN 252

Query: 137 NNLQWCAANFSSEDIPNGIGFGGRVHHFGLFISANFDQGHTFSCSTFGSPCLTKTNRILP 196
            NLQWCA NFSSE+IPNGIGFGGR +HFGLFISANFDQGHTFSCSTFGSPCL+KTNRI+P
Sbjct: 253 TNLQWCAVNFSSEEIPNGIGFGGRENHFGLFISANFDQGHTFSCSTFGSPCLSKTNRIVP 312

Query: 197 EVIECWGVTQGAVQGKNDAVKGTILER 223
           EVIECWGVTQG VQGKNDAVKGT+LER
Sbjct: 313 EVIECWGVTQGVVQGKNDAVKGTVLER 339


>Medtr8g090235.1 | TLD-domain nucleolar protein | HC |
           chr8:37877746-37873858 | 20130731
          Length = 356

 Score = 66.6 bits (161), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 38/150 (25%), Positives = 71/150 (47%), Gaps = 12/150 (8%)

Query: 57  EDWKILYHSAVNGLSFNTFLGNISSHEGPTVLIIKDTEGYIYGGYASQPWE--RHAEFYG 114
           + W ++Y +  +G+S +T         GP++L++ D +G ++GG    P       ++ G
Sbjct: 192 KKWLMMYSTWKHGISLSTLYRRSMLWPGPSLLVVGDRKGAVFGGLVEAPLRPSNKRKYQG 251

Query: 115 DMKSYLF-QLYPKASIFRPTGANNNLQWCAANFSSEDIPNGIGFGGRVHHFGLFISANFD 173
              +++F  +     ++RPTG N     C  +F +      IG GG   HF L++  +  
Sbjct: 252 TNSTFVFTNISGHPVVYRPTGVNRYFTLCTTDFLA------IGGGG---HFALYLEGDLL 302

Query: 174 QGHTFSCSTFGSPCLTKTNRILPEVIECWG 203
            G +    T+G+PCL  +     + +E WG
Sbjct: 303 NGSSSVSETYGNPCLAHSPEFQVKEVELWG 332


>Medtr1g073340.1 | oxidation resistance-like protein | HC |
           chr1:32545325-32549403 | 20130731
          Length = 313

 Score = 66.6 bits (161), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 42/152 (27%), Positives = 71/152 (46%), Gaps = 12/152 (7%)

Query: 59  WKILYHSAVNGLSFNTFLGNISSHEGPTVLIIKDTEGYIYGGYASQPWE--RHAEFYGDM 116
           W +LY +  +G+S  T +   +   GP +LI+ D +G ++GG    P +     ++ G  
Sbjct: 168 WVLLYSTLKHGISLRTLIRKSAELSGPALLIVGDRQGAVFGGLLDCPLKPTPKRKYQGTN 227

Query: 117 KSYLF-QLYPKASIFRPTGANNNLQWCAANFSSEDIPNGIGFGGRVHHFGLFISANFDQG 175
           ++++F  +Y +  +FRPTGAN     C          N +   G   +F L +  +   G
Sbjct: 228 QTFVFTTVYGQPRLFRPTGANRYYYMCL---------NDLLGLGGGGNFALCLDGDLLTG 278

Query: 176 HTFSCSTFGSPCLTKTNRILPEVIECWGVTQG 207
            +  C TFG+ CL  +     + IE WG T  
Sbjct: 279 TSGPCDTFGNQCLAHSPEFELKNIELWGFTHA 310


>Medtr3g087230.2 | TLD-domain nucleolar protein | HC |
           chr3:39550456-39547457 | 20130731
          Length = 371

 Score = 63.5 bits (153), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 39/148 (26%), Positives = 70/148 (47%), Gaps = 12/148 (8%)

Query: 59  WKILYHSAVNGLSFNTFLGNISSHEGPTVLIIKDTEGYIYGGYASQPWERHAE--FYGDM 116
           W +LY +  NG+S +T         G ++L++ D +G ++G     P +  ++  + G  
Sbjct: 209 WLLLYSTWRNGISLSTLYRRSMLWPGLSLLVVGDKKGAVFGSLVETPLKPSSKRKYQGTN 268

Query: 117 KSYLF-QLYPKASIFRPTGANNNLQWCAANFSSEDIPNGIGFGGRVHHFGLFISANFDQG 175
            +Y+F  +  +  I+ PTG N     C  ++ +      IG GG   HF L++  +   G
Sbjct: 269 STYVFSNISGRPIIYHPTGVNRYFTLCNTDYIA------IGGGG---HFALYLDGDLLNG 319

Query: 176 HTFSCSTFGSPCLTKTNRILPEVIECWG 203
            +    TFG+PCL  +     + +E WG
Sbjct: 320 SSSVSETFGNPCLANSQDFEVKEVELWG 347


>Medtr3g087230.1 | TLD-domain nucleolar protein | HC |
           chr3:39550451-39547457 | 20130731
          Length = 372

 Score = 63.5 bits (153), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 39/148 (26%), Positives = 70/148 (47%), Gaps = 12/148 (8%)

Query: 59  WKILYHSAVNGLSFNTFLGNISSHEGPTVLIIKDTEGYIYGGYASQPWERHAE--FYGDM 116
           W +LY +  NG+S +T         G ++L++ D +G ++G     P +  ++  + G  
Sbjct: 210 WLLLYSTWRNGISLSTLYRRSMLWPGLSLLVVGDKKGAVFGSLVETPLKPSSKRKYQGTN 269

Query: 117 KSYLF-QLYPKASIFRPTGANNNLQWCAANFSSEDIPNGIGFGGRVHHFGLFISANFDQG 175
            +Y+F  +  +  I+ PTG N     C  ++ +      IG GG   HF L++  +   G
Sbjct: 270 STYVFSNISGRPIIYHPTGVNRYFTLCNTDYIA------IGGGG---HFALYLDGDLLNG 320

Query: 176 HTFSCSTFGSPCLTKTNRILPEVIECWG 203
            +    TFG+PCL  +     + +E WG
Sbjct: 321 SSSVSETFGNPCLANSQDFEVKEVELWG 348


>Medtr8g090235.2 | TLD-domain nucleolar protein | HC |
           chr8:37877746-37873858 | 20130731
          Length = 360

 Score = 60.5 bits (145), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 35/135 (25%), Positives = 65/135 (48%), Gaps = 12/135 (8%)

Query: 57  EDWKILYHSAVNGLSFNTFLGNISSHEGPTVLIIKDTEGYIYGGYASQPWE--RHAEFYG 114
           + W ++Y +  +G+S +T         GP++L++ D +G ++GG    P       ++ G
Sbjct: 192 KKWLMMYSTWKHGISLSTLYRRSMLWPGPSLLVVGDRKGAVFGGLVEAPLRPSNKRKYQG 251

Query: 115 DMKSYLF-QLYPKASIFRPTGANNNLQWCAANFSSEDIPNGIGFGGRVHHFGLFISANFD 173
              +++F  +     ++RPTG N     C  +F +      IG GG   HF L++  +  
Sbjct: 252 TNSTFVFTNISGHPVVYRPTGVNRYFTLCTTDFLA------IGGGG---HFALYLEGDLL 302

Query: 174 QGHTFSCSTFGSPCL 188
            G +    T+G+PCL
Sbjct: 303 NGSSSVSETYGNPCL 317


>Medtr1g044690.1 | oxidation resistance-like protein | LC |
           chr1:16875077-16879347 | 20130731
          Length = 295

 Score = 53.9 bits (128), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 40/151 (26%), Positives = 65/151 (43%), Gaps = 12/151 (7%)

Query: 61  ILYHSAVNGLSFNTFLGNISSHEGPTVLIIKDTEGYIYGGYASQPW--ERHAEFYGDMKS 118
           +LY +  +G+S  T + N S    P +LI+ D +G ++G     P       ++ G  ++
Sbjct: 153 LLYSTLKHGISLRTLIRNSSQLTTPGLLIVGDMKGAVFGALLDCPLIPTTRPKYQGTHQT 212

Query: 119 YLF-QLYPKASIFRPTGANNNLQWCAANFSSEDIPNGIGFGGRVHHFGLFISANFDQGHT 177
           ++F  L     IFRPTG N     C+         N     G    F L++  +   G +
Sbjct: 213 FVFTNLDSHPRIFRPTGVNRYYYLCS---------NDSFAFGGGGGFALYLDGDLLTGTS 263

Query: 178 FSCSTFGSPCLTKTNRILPEVIECWGVTQGA 208
             C TF + CL  T     + +E WG T  +
Sbjct: 264 GPCDTFENHCLAHTPEFEIKNVELWGFTHTS 294