Miyakogusa Predicted Gene
- Lj1g3v4725830.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj1g3v4725830.1 Non Characterized Hit- tr|K3Y5Z6|K3Y5Z6_SETIT
Uncharacterized protein OS=Setaria italica
GN=Si009635,26.71,1e-18,PPR: pentatricopeptide repeat
domain,Pentatricopeptide repeat; no
description,Tetratricopeptide-like,CUFF.33039.1
(346 letters)
Database: Medicago_aa4.0v1
62,319 sequences; 21,947,249 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Medtr7g105440.1 | PPR containing plant-like protein | HC | chr7:... 575 e-164
Medtr7g105540.1 | PPR containing plant-like protein | HC | chr7:... 568 e-162
Medtr8g086040.1 | pentatricopeptide (PPR) repeat protein | HC | ... 313 2e-85
Medtr4g119120.1 | PPR containing plant-like protein | HC | chr4:... 310 1e-84
Medtr7g093900.2 | PPR containing plant-like protein | HC | chr7:... 304 6e-83
Medtr7g093900.1 | PPR containing plant-like protein | HC | chr7:... 304 7e-83
Medtr4g024860.1 | SLOW growth protein | HC | chr4:8430392-842602... 301 8e-82
Medtr7g011840.1 | PPR containing plant-like protein | HC | chr7:... 299 3e-81
Medtr8g106950.1 | pentatricopeptide (PPR) repeat protein | HC | ... 295 3e-80
Medtr2g018870.1 | PPR containing plant-like protein | HC | chr2:... 295 4e-80
Medtr4g095065.1 | pentatricopeptide (PPR) repeat protein | HC | ... 290 1e-78
Medtr7g076707.1 | PPR containing plant-like protein | HC | chr7:... 287 9e-78
Medtr4g099480.1 | pentatricopeptide (PPR) repeat protein | HC | ... 287 1e-77
Medtr8g106910.1 | pentatricopeptide (PPR) repeat protein | HC | ... 286 2e-77
Medtr5g006420.1 | organelle transcript processing protein, putat... 285 4e-77
Medtr4g086490.1 | PPR containing plant protein | HC | chr4:33903... 285 4e-77
Medtr4g113830.1 | organelle transcript processing protein, putat... 285 5e-77
Medtr7g011100.1 | pentatricopeptide (PPR) repeat protein | HC | ... 285 6e-77
Medtr5g023040.1 | pentatricopeptide (PPR) repeat protein | HC | ... 283 1e-76
Medtr8g086560.1 | PPR containing plant protein | HC | chr8:35911... 283 2e-76
Medtr3g096420.1 | PPR containing plant-like protein | HC | chr3:... 282 3e-76
Medtr7g056073.1 | basic helix loop helix protein, putative | HC ... 280 1e-75
Medtr7g078420.1 | PPR containing plant-like protein | HC | chr7:... 280 1e-75
Medtr8g066250.1 | PPR containing plant-like protein | HC | chr8:... 280 1e-75
Medtr8g027150.1 | PPR containing plant-like protein | HC | chr8:... 280 2e-75
Medtr4g098940.1 | PPR containing plant-like protein | HC | chr4:... 279 3e-75
Medtr6g093170.1 | PPR containing protein | HC | chr6:35177726-35... 278 5e-75
Medtr3g109380.2 | PPR containing plant-like protein | HC | chr3:... 278 6e-75
Medtr3g109380.1 | PPR containing plant-like protein | HC | chr3:... 278 6e-75
Medtr1g040000.1 | PPR containing plant-like protein | HC | chr1:... 278 6e-75
Medtr2g094430.1 | pentatricopeptide (PPR) repeat protein | HC | ... 278 7e-75
Medtr7g078360.1 | PPR containing plant-like protein | HC | chr7:... 276 2e-74
Medtr7g076020.1 | pentatricopeptide (PPR) repeat protein | HC | ... 275 3e-74
Medtr5g020650.1 | PPR containing plant-like protein | HC | chr5:... 275 6e-74
Medtr7g074040.1 | pentatricopeptide (PPR) repeat protein | HC | ... 271 5e-73
Medtr1g012380.1 | PPR containing plant-like protein | HC | chr1:... 271 5e-73
Medtr7g005870.1 | PPR containing plant-like protein | HC | chr7:... 270 2e-72
Medtr2g071810.1 | PPR containing plant-like protein | HC | chr2:... 269 3e-72
Medtr2g007570.1 | PPR containing plant-like protein | HC | chr2:... 268 4e-72
Medtr4g133610.1 | PPR containing plant-like protein | HC | chr4:... 268 7e-72
Medtr1g083890.1 | PPR containing plant-like protein | HC | chr1:... 265 5e-71
Medtr5g043780.1 | PPR containing plant-like protein | HC | chr5:... 265 7e-71
Medtr6g060510.1 | pentatricopeptide (PPR) repeat protein | HC | ... 264 1e-70
Medtr1g037590.1 | pentatricopeptide (PPR) repeat protein | HC | ... 263 3e-70
Medtr3g052720.1 | organelle transcript processing protein, putat... 261 7e-70
Medtr3g098230.1 | PPR containing plant-like protein | HC | chr3:... 261 7e-70
Medtr7g089260.1 | pentatricopeptide (PPR) repeat protein | HC | ... 261 9e-70
Medtr7g032360.1 | PPR containing plant-like protein | HC | chr7:... 260 2e-69
Medtr3g011940.1 | pentatricopeptide (PPR) repeat protein | HC | ... 259 2e-69
Medtr1g114220.1 | PPR containing plant-like protein | HC | chr1:... 259 3e-69
Medtr1g073300.1 | pentatricopeptide (PPR) repeat protein | HC | ... 259 3e-69
Medtr4g130500.1 | pentatricopeptide (PPR) repeat protein | HC | ... 259 3e-69
Medtr4g108890.1 | PPR containing plant-like protein | HC | chr4:... 259 4e-69
Medtr5g018690.1 | PPR containing protein | HC | chr5:6968759-697... 258 8e-69
Medtr1g071240.1 | pentatricopeptide (PPR) repeat protein | HC | ... 257 1e-68
Medtr6g059820.1 | PPR containing plant-like protein | HC | chr6:... 256 2e-68
Medtr7g023780.1 | editing factor 22 | HC | chr7:7790817-7787040 ... 256 2e-68
Medtr3g011950.1 | pentatricopeptide (PPR) repeat protein | HC | ... 256 3e-68
Medtr1g038860.1 | PPR containing plant-like protein | LC | chr1:... 254 7e-68
Medtr2g087120.1 | PPR containing plant-like protein | HC | chr2:... 254 9e-68
Medtr1g059280.1 | pentatricopeptide (PPR) repeat protein | HC | ... 253 1e-67
Medtr8g105720.1 | PPR containing plant-like protein | HC | chr8:... 253 3e-67
Medtr6g075280.1 | pentatricopeptide (PPR) repeat protein | HC | ... 252 4e-67
Medtr3g105370.3 | pentatricopeptide (PPR) repeat protein | HC | ... 251 8e-67
Medtr3g105370.2 | pentatricopeptide (PPR) repeat protein | HC | ... 251 8e-67
Medtr3g105370.1 | pentatricopeptide (PPR) repeat protein | HC | ... 251 8e-67
Medtr3g084440.1 | pentatricopeptide (PPR) repeat protein | HC | ... 250 1e-66
Medtr7g109860.1 | pentatricopeptide (PPR) repeat protein | HC | ... 250 2e-66
Medtr5g040920.1 | pentatricopeptide (PPR) repeat protein | HC | ... 249 2e-66
Medtr7g016960.1 | pentatricopeptide (PPR) repeat protein | HC | ... 249 3e-66
Medtr5g008600.1 | pentatricopeptide (PPR) repeat protein | HC | ... 249 4e-66
Medtr1g111020.2 | pentatricopeptide (PPR) repeat protein | HC | ... 247 1e-65
Medtr1g059810.1 | pentatricopeptide (PPR) repeat protein | HC | ... 247 1e-65
Medtr1g111020.1 | pentatricopeptide (PPR) repeat protein | HC | ... 247 1e-65
Medtr8g089960.1 | pentatricopeptide (PPR) repeat protein | HC | ... 247 1e-65
Medtr4g094402.5 | pentatricopeptide (PPR) repeat protein | HC | ... 246 2e-65
Medtr4g094402.4 | pentatricopeptide (PPR) repeat protein | HC | ... 246 2e-65
Medtr4g094402.3 | pentatricopeptide (PPR) repeat protein | HC | ... 246 2e-65
Medtr4g094402.2 | pentatricopeptide (PPR) repeat protein | HC | ... 246 2e-65
Medtr3g027990.1 | pentatricopeptide (PPR) repeat protein | HC | ... 245 4e-65
Medtr1g112500.1 | pentatricopeptide (PPR) repeat protein | HC | ... 245 5e-65
Medtr6g032915.1 | pentatricopeptide (PPR) repeat protein | HC | ... 245 5e-65
Medtr4g094402.1 | pentatricopeptide (PPR) repeat protein | HC | ... 244 7e-65
Medtr8g063290.1 | pentatricopeptide (PPR) repeat protein | HC | ... 244 1e-64
Medtr6g018720.1 | PPR containing plant-like protein | HC | chr6:... 244 1e-64
Medtr3g080230.1 | PPR containing plant-like protein | HC | chr3:... 243 2e-64
Medtr3g080230.2 | PPR containing plant-like protein | HC | chr3:... 243 2e-64
Medtr4g032895.1 | pentatricopeptide (PPR) repeat protein | HC | ... 243 2e-64
Medtr2g036960.1 | PPR containing plant-like protein | HC | chr2:... 243 2e-64
Medtr5g091640.1 | PPR containing plant-like protein | HC | chr5:... 243 2e-64
Medtr4g131300.1 | PPR containing plant-like protein | HC | chr4:... 243 3e-64
Medtr1g040635.1 | pentatricopeptide (PPR) repeat protein | HC | ... 242 3e-64
Medtr3g434800.1 | pentatricopeptide (PPR) repeat protein | HC | ... 242 3e-64
Medtr1g007600.1 | pentatricopeptide (PPR) repeat protein | HC | ... 242 4e-64
Medtr5g088310.1 | pentatricopeptide (PPR) repeat protein | HC | ... 242 5e-64
Medtr7g083820.1 | pentatricopeptide (PPR) repeat protein | HC | ... 241 6e-64
Medtr7g083820.2 | pentatricopeptide (PPR) repeat protein | HC | ... 241 6e-64
Medtr8g087980.1 | PPR containing plant-like protein | HC | chr8:... 241 8e-64
Medtr2g042550.1 | pentatricopeptide (PPR) repeat protein | HC | ... 241 8e-64
Medtr2g024080.1 | PPR containing plant-like protein | HC | chr2:... 241 8e-64
Medtr3g096440.1 | PPR containing plant-like protein | HC | chr3:... 241 1e-63
Medtr7g417770.1 | PPR containing plant-like protein | HC | chr7:... 240 1e-63
Medtr7g017700.1 | PPR containing plant-like protein | HC | chr7:... 240 1e-63
Medtr8g089940.1 | pentatricopeptide (PPR) repeat protein | HC | ... 240 1e-63
Medtr1g014340.1 | PPR containing plant-like protein | HC | chr1:... 240 2e-63
Medtr1g014340.2 | PPR containing plant-like protein | HC | chr1:... 240 2e-63
Medtr1g040565.1 | pentatricopeptide (PPR) repeat protein | HC | ... 239 2e-63
Medtr7g076350.1 | pentatricopeptide (PPR) repeat protein | HC | ... 239 2e-63
Medtr1g040585.1 | pentatricopeptide (PPR) repeat protein | HC | ... 239 2e-63
Medtr4g088840.1 | pentatricopeptide (PPR) repeat protein | HC | ... 239 4e-63
Medtr5g006570.1 | pentatricopeptide (PPR) repeat protein | HC | ... 238 5e-63
Medtr2g016780.1 | editing factor, putative | HC | chr2:5197710-5... 238 6e-63
Medtr1g059280.2 | pentatricopeptide (PPR) repeat protein | HC | ... 238 6e-63
Medtr3g466010.1 | PPR containing plant-like protein | HC | chr3:... 238 6e-63
Medtr4g094502.1 | pentatricopeptide (PPR) repeat protein | HC | ... 238 7e-63
Medtr8g068150.1 | SLOW growth protein, putative | HC | chr8:2840... 238 7e-63
Medtr5g013950.1 | pentatricopeptide (PPR) repeat protein | HC | ... 238 8e-63
Medtr2g013500.1 | PPR containing plant-like protein | HC | chr2:... 238 8e-63
Medtr4g023510.1 | PPR containing plant-like protein | HC | chr4:... 237 1e-62
Medtr2g015530.1 | pentatricopeptide (PPR) repeat protein | HC | ... 237 1e-62
Medtr8g105210.1 | PPR containing plant-like protein | HC | chr8:... 237 1e-62
Medtr1g059720.1 | organelle transcript processing protein, putat... 237 1e-62
Medtr1g103660.1 | PPR containing plant-like protein | HC | chr1:... 237 2e-62
Medtr2g058990.1 | pentatricopeptide (PPR) repeat protein | HC | ... 237 2e-62
Medtr0011s0300.1 | PPR containing plant-like protein | HC | scaf... 236 2e-62
Medtr2g026210.1 | PPR containing plant-like protein | HC | chr2:... 236 3e-62
Medtr2g035620.1 | PPR containing plant protein | HC | chr2:15068... 236 3e-62
Medtr4g085110.1 | pentatricopeptide (PPR) repeat protein | HC | ... 235 4e-62
Medtr1g007610.1 | pentatricopeptide (PPR) repeat protein | HC | ... 235 4e-62
Medtr1g039030.1 | pentatricopeptide (PPR) repeat protein | HC | ... 235 5e-62
Medtr1g103840.1 | pentatricopeptide (PPR) repeat protein | HC | ... 234 7e-62
Medtr8g027810.1 | pentatricopeptide (PPR) repeat protein | HC | ... 234 8e-62
Medtr8g065730.2 | PPR containing plant-like protein | HC | chr8:... 234 8e-62
Medtr8g065730.1 | PPR containing plant-like protein | HC | chr8:... 234 8e-62
Medtr4g094592.1 | pentatricopeptide (PPR) repeat protein | HC | ... 234 1e-61
Medtr3g089880.1 | pentatricopeptide (PPR) repeat protein | HC | ... 234 1e-61
Medtr6g012850.1 | pentatricopeptide (PPR) repeat protein | HC | ... 233 2e-61
Medtr3g098280.1 | pentatricopeptide (PPR) repeat protein | HC | ... 233 2e-61
Medtr3g037470.1 | TPR superfamily protein | HC | chr3:13772234-1... 233 2e-61
Medtr7g037430.1 | pentatricopeptide (PPR) repeat protein | LC | ... 233 2e-61
Medtr4g074150.2 | PPR containing plant-like protein | HC | chr4:... 233 2e-61
Medtr4g074150.1 | PPR containing plant-like protein | HC | chr4:... 233 2e-61
Medtr8g069550.1 | PPR containing plant-like protein | HC | chr8:... 233 2e-61
Medtr8g069550.2 | PPR containing plant-like protein | HC | chr8:... 233 2e-61
Medtr3g026690.1 | PPR containing plant-like protein | HC | chr3:... 232 5e-61
Medtr4g064770.1 | pentatricopeptide (PPR) repeat protein | HC | ... 231 6e-61
Medtr4g007160.1 | PPR containing plant-like protein | HC | chr4:... 231 9e-61
Medtr2g072010.1 | PPR containing plant-like protein | HC | chr2:... 231 9e-61
Medtr7g108530.1 | PPR containing plant-like protein | HC | chr7:... 231 1e-60
Medtr5g027980.1 | pentatricopeptide (PPR) repeat protein | HC | ... 231 1e-60
Medtr6g066360.1 | PPR containing plant-like protein | HC | chr6:... 230 1e-60
Medtr2g086150.1 | PPR containing plant-like protein | HC | chr2:... 230 1e-60
Medtr8g479320.2 | PPR containing plant-like protein | HC | chr8:... 230 1e-60
Medtr8g479320.1 | PPR containing plant-like protein | HC | chr8:... 230 1e-60
Medtr8g107740.1 | pentatricopeptide (PPR) repeat protein | HC | ... 230 2e-60
Medtr4g082470.1 | PPR containing plant-like protein | HC | chr4:... 230 2e-60
Medtr8g102760.1 | PPR containing plant-like protein | HC | chr8:... 229 2e-60
Medtr5g043450.1 | PPR containing plant-like protein | HC | chr5:... 229 3e-60
Medtr3g005330.1 | PPR containing plant-like protein | HC | chr3:... 229 3e-60
Medtr4g113240.1 | pentatricopeptide (PPR) repeat protein | HC | ... 229 4e-60
Medtr1g085700.1 | pentatricopeptide (PPR) repeat protein, putati... 229 4e-60
Medtr3g011920.1 | PPR containing plant-like protein | HC | chr3:... 229 4e-60
Medtr1g067280.1 | PPR containing plant-like protein | HC | chr1:... 228 5e-60
Medtr3g045450.1 | pentatricopeptide (PPR) repeat protein | HC | ... 228 6e-60
Medtr4g015760.2 | PPR containing plant-like protein | HC | chr4:... 227 1e-59
Medtr4g015760.3 | PPR containing plant-like protein | HC | chr4:... 227 1e-59
Medtr4g118700.1 | PPR containing plant-like protein | HC | chr4:... 227 1e-59
Medtr4g015760.4 | PPR containing plant-like protein | HC | chr4:... 226 2e-59
Medtr4g015760.1 | PPR containing plant-like protein | HC | chr4:... 226 2e-59
Medtr1g041310.1 | pentatricopeptide (PPR) repeat protein | HC | ... 226 2e-59
Medtr2g101710.1 | PPR containing plant protein | HC | chr2:43758... 226 3e-59
Medtr5g098860.1 | PPR containing plant-like protein | HC | chr5:... 225 4e-59
Medtr8g096030.1 | PPR containing plant-like protein | HC | chr8:... 224 7e-59
Medtr3g111500.1 | PPR containing plant-like protein | HC | chr3:... 224 1e-58
Medtr7g053240.1 | pentatricopeptide (PPR) repeat protein | HC | ... 223 2e-58
Medtr1g073160.1 | PPR containing plant-like protein | HC | chr1:... 223 2e-58
Medtr4g074470.1 | PPR containing plant-like protein | HC | chr4:... 223 2e-58
Medtr5g024360.1 | PPR containing plant-like protein | HC | chr5:... 223 2e-58
Medtr4g108030.1 | PPR containing plant-like protein | HC | chr4:... 223 3e-58
Medtr4g011730.1 | PPR containing plant-like protein | HC | chr4:... 223 3e-58
Medtr2g049310.1 | PPR containing plant-like protein | HC | chr2:... 223 3e-58
Medtr5g095690.1 | pentatricopeptide (PPR) repeat protein | HC | ... 223 3e-58
Medtr4g087150.1 | PPR containing plant-like protein | HC | chr4:... 223 3e-58
Medtr8g028890.1 | PPR containing plant-like protein | HC | chr8:... 222 5e-58
Medtr8g031210.2 | PPR containing plant-like protein | HC | chr8:... 221 7e-58
Medtr8g031210.1 | PPR containing plant-like protein | HC | chr8:... 221 8e-58
Medtr8g031210.3 | PPR containing plant-like protein | HC | chr8:... 221 8e-58
Medtr2g019350.1 | PPR containing plant-like protein | HC | chr2:... 221 8e-58
Medtr8g075460.1 | PPR containing plant-like protein | HC | chr8:... 221 1e-57
Medtr2g021710.1 | PPR containing plant-like protein | HC | chr2:... 221 1e-57
Medtr2g009760.1 | PPR containing plant-like protein | HC | chr2:... 221 1e-57
Medtr8g098250.1 | PPR containing plant-like protein | HC | chr8:... 219 4e-57
Medtr0013s0120.1 | pentatricopeptide (PPR) repeat protein | HC |... 219 4e-57
Medtr8g066670.1 | chlororespiratory reduction protein, putative ... 218 5e-57
Medtr6g060470.1 | pentatricopeptide (PPR) repeat protein | HC | ... 218 6e-57
Medtr1g111670.1 | pentatricopeptide (PPR) repeat protein | HC | ... 217 1e-56
Medtr1g084570.1 | PPR containing plant-like protein | HC | chr1:... 217 1e-56
Medtr5g022740.1 | PPR containing plant-like protein | HC | chr5:... 216 2e-56
Medtr4g094645.1 | pentatricopeptide (PPR) repeat protein | HC | ... 216 2e-56
Medtr4g014050.1 | PPR containing plant-like protein | HC | chr4:... 215 6e-56
Medtr3g101700.1 | PPR containing plant-like protein | HC | chr3:... 214 7e-56
Medtr8g074780.1 | PPR containing plant-like protein | HC | chr8:... 214 9e-56
Medtr2g436470.1 | pentatricopeptide (PPR) repeat protein | HC | ... 213 2e-55
Medtr4g108660.1 | PPR containing plant-like protein | HC | chr4:... 213 2e-55
Medtr3g006800.1 | pentatricopeptide (PPR) repeat protein | HC | ... 213 3e-55
Medtr7g106930.1 | pentatricopeptide (PPR) repeat protein | HC | ... 212 4e-55
Medtr4g031160.1 | pentatricopeptide (PPR) repeat protein | HC | ... 212 5e-55
Medtr3g072900.1 | PPR containing plant-like protein | HC | chr3:... 212 5e-55
Medtr0493s0010.1 | pentatricopeptide (PPR) repeat protein | HC |... 212 5e-55
Medtr3g029530.1 | pentatricopeptide (PPR) repeat protein | HC | ... 211 7e-55
Medtr7g011030.1 | pentatricopeptide (PPR) repeat protein | HC | ... 211 1e-54
Medtr4g094692.1 | pentatricopeptide (PPR) repeat protein | HC | ... 209 2e-54
Medtr5g025580.1 | PPR containing plant-like protein | HC | chr5:... 209 3e-54
Medtr4g078750.1 | PPR containing plant-like protein | HC | chr4:... 209 3e-54
Medtr5g044260.1 | PPR containing plant-like protein | HC | chr5:... 209 4e-54
Medtr6g022140.2 | pentatricopeptide (PPR) repeat protein | HC | ... 208 8e-54
Medtr6g022140.1 | pentatricopeptide (PPR) repeat protein | HC | ... 207 9e-54
Medtr4g011570.1 | pentatricopeptide (PPR) repeat protein | HC | ... 207 1e-53
Medtr5g008840.1 | pentatricopeptide (PPR) repeat protein | HC | ... 207 1e-53
Medtr5g038580.1 | PPR containing plant-like protein | HC | chr5:... 207 2e-53
Medtr7g100810.1 | pentatricopeptide (PPR) repeat protein | HC | ... 206 3e-53
Medtr7g033400.1 | PPR containing protein | HC | chr7:12012362-12... 205 4e-53
Medtr1g052100.1 | PPR containing plant-like protein | HC | chr1:... 205 6e-53
Medtr4g094658.1 | pentatricopeptide (PPR) repeat protein | HC | ... 205 7e-53
Medtr3g012530.1 | pentatricopeptide (PPR) repeat protein | HC | ... 204 8e-53
Medtr5g008690.1 | PPR containing plant-like protein | HC | chr5:... 204 9e-53
Medtr7g082690.1 | PPR containing plant-like protein | HC | chr7:... 204 9e-53
Medtr4g073930.1 | PPR containing plant-like protein | HC | chr4:... 204 1e-52
Medtr7g079860.1 | pentatricopeptide (PPR) repeat protein | HC | ... 202 3e-52
Medtr7g113540.1 | PPR containing plant-like protein | HC | chr7:... 202 4e-52
Medtr5g094220.1 | PPR containing plant-like protein | HC | chr5:... 202 4e-52
Medtr3g063220.1 | PPR containing plant-like protein | HC | chr3:... 202 5e-52
Medtr4g068900.1 | PPR containing plant-like protein | HC | chr4:... 201 8e-52
Medtr3g408390.1 | PPR containing plant-like protein | HC | chr3:... 201 1e-51
Medtr2g028240.1 | PPR containing plant-like protein | HC | chr2:... 200 2e-51
Medtr3g077200.1 | PPR containing plant-like protein | HC | chr3:... 199 3e-51
Medtr7g092100.1 | RNAediting factor 1 | HC | chr7:36467361-36465... 198 8e-51
Medtr5g043920.1 | PPR containing plant-like protein | HC | chr5:... 198 8e-51
Medtr8g088300.1 | pentatricopeptide (PPR) repeat protein | HC | ... 197 1e-50
Medtr3g117620.1 | PPR containing plant-like protein | HC | chr3:... 197 2e-50
Medtr2g061460.1 | pentatricopeptide (PPR) repeat protein | HC | ... 194 1e-49
Medtr3g117150.1 | organelle transcript processing protein, putat... 193 2e-49
Medtr5g008260.1 | pentatricopeptide (PPR) repeat protein | HC | ... 192 3e-49
Medtr5g049780.1 | pentatricopeptide (PPR) repeat protein | HC | ... 192 6e-49
Medtr1g040535.1 | pentatricopeptide (PPR) repeat protein | LC | ... 191 7e-49
Medtr8g035960.1 | PPR containing plant-like protein | HC | chr8:... 191 1e-48
Medtr2g048855.1 | pentatricopeptide (PPR) repeat protein | HC | ... 190 2e-48
Medtr5g071190.1 | PPR containing plant-like protein | HC | chr5:... 190 2e-48
Medtr5g031490.1 | pentatricopeptide (PPR) repeat protein | HC | ... 190 2e-48
Medtr5g018370.1 | PPR containing plant-like protein | HC | chr5:... 187 1e-47
Medtr5g067140.1 | pentatricopeptide (PPR) repeat protein | HC | ... 186 2e-47
Medtr4g119420.1 | pentatricopeptide (PPR) repeat protein | HC | ... 186 4e-47
Medtr7g084830.1 | PPR containing plant-like protein | HC | chr7:... 185 5e-47
Medtr5g012660.1 | PPR containing plant-like protein | HC | chr5:... 184 1e-46
Medtr1g099590.1 | pentatricopeptide (PPR) repeat protein | HC | ... 183 2e-46
Medtr7g103230.1 | PPR containing plant-like protein | HC | chr7:... 181 1e-45
Medtr2g082550.1 | PPR containing plant-like protein, putative | ... 180 2e-45
Medtr7g082550.1 | PPR containing plant-like protein | HC | chr7:... 179 4e-45
Medtr7g111120.1 | PPR containing plant-like protein | HC | chr7:... 178 6e-45
Medtr5g024100.1 | PPR containing plant-like protein | HC | chr5:... 176 4e-44
Medtr4g084790.1 | PPR domain protein | HC | chr4:33048235-330493... 175 6e-44
Medtr3g088835.1 | PPR containing plant-like protein | HC | chr3:... 174 8e-44
Medtr8g063450.1 | PPR containing plant-like protein | HC | chr8:... 173 2e-43
Medtr2g099400.1 | PPR superfamily protein | HC | chr2:42618637-4... 171 7e-43
Medtr5g031630.1 | PPR containing plant-like protein, putative | ... 159 4e-39
Medtr2g087110.1 | pentatricopeptide (PPR) repeat protein | HC | ... 156 2e-38
Medtr8g065040.1 | PPR containing plant-like protein | HC | chr8:... 155 5e-38
Medtr8g009490.1 | pentatricopeptide (PPR) repeat protein | HC | ... 154 9e-38
Medtr2g087200.1 | pentatricopeptide (PPR) repeat protein | HC | ... 153 2e-37
Medtr3g088820.1 | PPR containing plant-like protein | HC | chr3:... 149 4e-36
Medtr6g016020.1 | PPR containing plant-like protein | HC | chr6:... 148 6e-36
Medtr3g088825.1 | PPR containing plant-like protein | HC | chr3:... 146 3e-35
Medtr4g084680.1 | PPR containing plant-like protein | HC | chr4:... 145 5e-35
Medtr6g460480.1 | organelle transcript processing protein, putat... 132 5e-31
Medtr5g042450.1 | PPR containing plant-like protein | HC | chr5:... 130 2e-30
Medtr5g042450.2 | PPR containing plant-like protein | HC | chr5:... 130 2e-30
Medtr1g040705.2 | PPR containing plant-like protein | HC | chr1:... 127 2e-29
Medtr2g021850.1 | PPR containing plant-like protein | HC | chr2:... 124 1e-28
Medtr1g040705.1 | PPR containing plant-like protein | HC | chr1:... 124 2e-28
Medtr1g040705.3 | PPR containing plant-like protein | HC | chr1:... 124 2e-28
Medtr2g022040.1 | PPR containing plant-like protein | HC | chr2:... 119 5e-27
Medtr5g068510.1 | PPR containing plant-like protein | HC | chr5:... 119 5e-27
Medtr4g006900.1 | PPR containing plant-like protein | HC | chr4:... 113 3e-25
Medtr6g091880.1 | PPR containing plant-like protein | HC | chr6:... 111 1e-24
Medtr1g031720.1 | PPR containing plant-like protein | LC | chr1:... 109 4e-24
Medtr4g087150.2 | PPR containing plant-like protein | HC | chr4:... 107 1e-23
Medtr6g072030.1 | pentatricopeptide (PPR) repeat protein | HC | ... 106 3e-23
Medtr6g079220.1 | pentatricopeptide (PPR) repeat protein | LC | ... 105 7e-23
Medtr5g077930.1 | PPR containing plant-like protein | HC | chr5:... 103 2e-22
Medtr8g098755.1 | PPR containing plant-like protein | HC | chr8:... 102 4e-22
Medtr4g083630.1 | PPR containing plant-like protein | HC | chr4:... 102 5e-22
Medtr8g105170.1 | PPR containing plant-like protein | LC | chr8:... 102 6e-22
Medtr6g034150.1 | PPR containing plant-like protein | HC | chr6:... 101 8e-22
Medtr4g086270.1 | PPR containing plant-like protein | HC | chr4:... 101 1e-21
Medtr6g092170.1 | PPR containing plant-like protein | HC | chr6:... 100 1e-21
Medtr6g061120.1 | pentatricopeptide (PPR) repeat protein | HC | ... 97 2e-20
Medtr2g035630.1 | pentatricopeptide (PPR) repeat protein | HC | ... 97 3e-20
Medtr5g090210.1 | PPR containing plant-like protein | HC | chr5:... 96 4e-20
Medtr1g033960.1 | PPR containing plant-like protein | HC | chr1:... 96 4e-20
Medtr3g034990.2 | pentatricopeptide (PPR) repeat protein | LC | ... 96 5e-20
Medtr3g034990.1 | pentatricopeptide (PPR) repeat protein | LC | ... 96 5e-20
Medtr7g067460.1 | TCP-1/cpn60 chaperonin family protein | HC | c... 95 9e-20
Medtr5g031740.1 | PPR containing plant-like protein | HC | chr5:... 95 1e-19
Medtr7g011500.1 | pentatricopeptide (PPR) repeat protein | LC | ... 95 1e-19
Medtr6g069840.1 | pentatricopeptide (PPR) repeat protein | HC | ... 94 1e-19
Medtr6g069840.3 | pentatricopeptide (PPR) repeat protein | HC | ... 94 2e-19
Medtr6g069840.2 | pentatricopeptide (PPR) repeat protein | HC | ... 94 2e-19
Medtr0237s0070.1 | pentatricopeptide (PPR) repeat protein | LC |... 94 2e-19
Medtr6g079210.1 | pentatricopeptide (PPR) repeat protein | HC | ... 94 2e-19
Medtr2g006810.1 | PPR containing plant-like protein | HC | chr2:... 94 2e-19
Medtr2g041700.1 | PPR containing plant-like protein | HC | chr2:... 94 2e-19
Medtr6g079920.1 | pentatricopeptide (PPR) repeat protein | LC | ... 94 3e-19
Medtr1g068960.1 | PPR containing plant-like protein | HC | chr1:... 93 3e-19
Medtr6g080210.1 | pentatricopeptide (PPR) repeat protein | HC | ... 93 4e-19
Medtr6g079830.1 | pentatricopeptide (PPR) repeat protein | LC | ... 93 4e-19
Medtr4g108060.2 | PPR containing plant-like protein | HC | chr4:... 93 5e-19
Medtr6g079310.1 | pentatricopeptide (PPR) repeat protein | HC | ... 93 5e-19
Medtr8g054410.2 | PPR containing plant-like protein | HC | chr8:... 92 5e-19
Medtr8g054410.1 | PPR containing plant-like protein | HC | chr8:... 92 5e-19
Medtr6g079240.1 | pentatricopeptide (PPR) repeat protein | HC | ... 92 5e-19
Medtr3g037490.1 | PPR containing plant-like protein | HC | chr3:... 92 6e-19
Medtr4g068360.1 | PPR containing plant-like protein | HC | chr4:... 92 7e-19
Medtr0308s0020.1 | pentatricopeptide (PPR) repeat protein | LC |... 92 7e-19
Medtr6g077540.1 | pentatricopeptide (PPR) repeat protein | HC | ... 92 8e-19
Medtr4g108060.1 | PPR containing plant-like protein | HC | chr4:... 92 9e-19
Medtr6g079180.1 | pentatricopeptide (PPR) repeat protein | HC | ... 91 1e-18
Medtr7g091470.1 | PPR containing plant-like protein | HC | chr7:... 91 1e-18
Medtr1g045880.1 | PPR containing plant-like protein | HC | chr1:... 91 2e-18
Medtr6g079590.1 | pentatricopeptide (PPR) repeat protein | LC | ... 91 2e-18
Medtr3g045420.1 | PPR containing plant-like protein | HC | chr3:... 91 2e-18
Medtr6g478210.1 | pentatricopeptide (PPR) repeat protein | HC | ... 90 3e-18
Medtr0054s0140.1 | pentatricopeptide (PPR) repeat protein | LC |... 90 3e-18
Medtr6g079890.1 | pentatricopeptide (PPR) repeat protein | LC | ... 90 4e-18
Medtr2g049740.1 | PPR containing plant-like protein | HC | chr2:... 90 4e-18
Medtr1g029490.1 | pentatricopeptide (PPR) repeat protein | LC | ... 89 4e-18
Medtr6g068820.1 | pentatricopeptide (PPR) repeat protein | HC | ... 89 4e-18
Medtr6g078160.1 | pentatricopeptide (PPR) repeat protein | HC | ... 89 5e-18
Medtr6g081920.1 | pentatricopeptide (PPR) repeat protein | LC | ... 89 6e-18
Medtr6g079440.1 | RNA processing factor 2, putative | HC | chr6:... 89 7e-18
Medtr3g054110.1 | pentatricopeptide (PPR) repeat protein | HC | ... 89 7e-18
Medtr4g089005.1 | pentatricopeptide (PPR) repeat protein | HC | ... 88 1e-17
Medtr4g108650.1 | PPR containing plant-like protein | HC | chr4:... 88 1e-17
Medtr0573s0020.1 | pentatricopeptide (PPR) repeat protein | HC |... 88 1e-17
Medtr6g069300.1 | pentatricopeptide (PPR) repeat protein | HC | ... 88 1e-17
Medtr5g007250.1 | PPR containing plant-like protein | HC | chr5:... 88 1e-17
Medtr4g074390.1 | PPR containing plant-like protein | HC | chr4:... 87 2e-17
Medtr3g061000.1 | pentatricopeptide (PPR) repeat protein | LC | ... 87 2e-17
Medtr0014s0210.1 | pentatricopeptide (PPR) repeat protein | LC |... 87 2e-17
Medtr8g107050.2 | pentatricopeptide (PPR) repeat protein | LC | ... 87 2e-17
Medtr6g077800.1 | pentatricopeptide (PPR) repeat protein | LC | ... 87 2e-17
Medtr6g478130.1 | pentatricopeptide (PPR) repeat protein | HC | ... 87 2e-17
Medtr0110s0060.1 | pentatricopeptide (PPR) repeat protein | HC |... 87 2e-17
Medtr8g107050.1 | pentatricopeptide (PPR) repeat protein | LC | ... 87 2e-17
Medtr6g078210.1 | pentatricopeptide (PPR) repeat protein | LC | ... 87 2e-17
Medtr8g015530.1 | PPR repeat protein | LC | chr8:5078258-5077407... 87 3e-17
Medtr6g079380.1 | pentatricopeptide (PPR) repeat protein | LC | ... 87 3e-17
Medtr1g080110.1 | pentatricopeptide (PPR) repeat protein | HC | ... 86 4e-17
Medtr2g094420.1 | PPR containing plant-like protein | HC | chr2:... 86 5e-17
Medtr6g471100.1 | pentatricopeptide (PPR) repeat protein | LC | ... 86 5e-17
Medtr2g035450.1 | PPR containing plant-like protein | HC | chr2:... 86 6e-17
Medtr4g076540.1 | PPR containing plant-like protein | HC | chr4:... 86 6e-17
Medtr1g050495.1 | pentatricopeptide (PPR) repeat protein | LC | ... 86 7e-17
Medtr6g079250.1 | pentatricopeptide (PPR) repeat protein | HC | ... 86 7e-17
Medtr8g064830.1 | pentatricopeptide (PPR) repeat protein | HC | ... 86 8e-17
Medtr7g012890.1 | pentatricopeptide (PPR) repeat protein | LC | ... 84 2e-16
Medtr7g405940.1 | PPR containing plant-like protein | HC | chr7:... 84 2e-16
Medtr2g103520.1 | PPR containing plant-like protein | HC | chr2:... 84 3e-16
Medtr6g080200.1 | pentatricopeptide (PPR) repeat protein | HC | ... 83 3e-16
Medtr6g080200.2 | pentatricopeptide (PPR) repeat protein | HC | ... 83 3e-16
Medtr7g007400.1 | PPR containing plant-like protein | HC | chr7:... 83 4e-16
Medtr5g090170.4 | PPR containing plant-like protein | HC | chr5:... 83 5e-16
Medtr5g090170.2 | PPR containing plant-like protein | HC | chr5:... 83 5e-16
Medtr5g090170.3 | PPR containing plant-like protein | HC | chr5:... 83 5e-16
Medtr5g090170.5 | PPR containing plant-like protein | HC | chr5:... 83 5e-16
Medtr5g090170.6 | PPR containing plant-like protein | HC | chr5:... 83 5e-16
Medtr3g105900.1 | proton gradient regulation protein | HC | chr3... 83 5e-16
Medtr1g045850.1 | pentatricopeptide (PPR) repeat protein | LC | ... 83 5e-16
Medtr5g090170.1 | PPR containing plant-like protein | HC | chr5:... 83 5e-16
Medtr5g095130.1 | PPR containing plant-like protein | HC | chr5:... 82 6e-16
Medtr7g091410.2 | PPR containing plant-like protein | HC | chr7:... 82 6e-16
Medtr7g091410.1 | PPR containing plant-like protein | HC | chr7:... 82 6e-16
Medtr1g095880.1 | PPR containing plant-like protein | HC | chr1:... 82 7e-16
Medtr7g091410.3 | PPR containing plant-like protein | HC | chr7:... 82 8e-16
Medtr6g022260.1 | PPR containing plant-like protein | HC | chr6:... 82 8e-16
Medtr7g091410.4 | PPR containing plant-like protein | HC | chr7:... 82 8e-16
Medtr4g040410.1 | PPR containing plant-like protein | HC | chr4:... 82 9e-16
Medtr6g069180.1 | pentatricopeptide (PPR) repeat protein | LC | ... 82 1e-15
Medtr6g069180.2 | pentatricopeptide (PPR) repeat protein | LC | ... 82 1e-15
Medtr6g092220.1 | PPR containing plant-like protein | HC | chr6:... 81 1e-15
Medtr4g062480.2 | PPR containing plant-like protein | HC | chr4:... 81 1e-15
Medtr4g062480.3 | PPR containing plant-like protein | HC | chr4:... 81 1e-15
Medtr4g062480.1 | PPR containing plant-like protein | HC | chr4:... 81 1e-15
Medtr0019s0210.3 | pentatricopeptide (PPR) repeat protein | LC |... 81 1e-15
Medtr0019s0210.2 | pentatricopeptide (PPR) repeat protein | LC |... 81 1e-15
Medtr0019s0210.1 | pentatricopeptide (PPR) repeat protein | LC |... 81 1e-15
Medtr6g069170.1 | pentatricopeptide (PPR) repeat protein | HC | ... 81 2e-15
Medtr7g024140.1 | PPR containing plant-like protein, putative | ... 80 2e-15
Medtr2g023220.1 | PPR containing plant-like protein | HC | chr2:... 80 2e-15
Medtr0014s0260.1 | pentatricopeptide (PPR) repeat protein | LC |... 80 3e-15
Medtr6g079960.1 | pentatricopeptide (PPR) repeat protein, putati... 80 3e-15
Medtr4g023520.1 | PPR repeat protein | LC | chr4:7956288-7959311... 80 3e-15
Medtr3g061020.1 | pentatricopeptide (PPR) repeat protein | HC | ... 80 3e-15
Medtr3g115270.1 | PPR containing plant-like protein | HC | chr3:... 80 4e-15
Medtr3g115270.2 | PPR containing plant-like protein | HC | chr3:... 80 4e-15
Medtr7g103600.1 | pentatricopeptide (PPR) repeat protein | HC | ... 80 4e-15
Medtr5g008300.1 | PPR containing plant-like protein | HC | chr5:... 80 4e-15
Medtr6g068790.1 | pentatricopeptide (PPR) repeat protein | LC | ... 79 4e-15
Medtr7g090340.1 | PPR containing plant-like protein | HC | chr7:... 79 5e-15
Medtr0014s0250.1 | pentatricopeptide (PPR) repeat protein | LC |... 79 5e-15
Medtr3g088810.1 | PPR containing plant-like protein | LC | chr3:... 79 6e-15
Medtr5g039750.1 | PPR containing plant-like protein | LC | chr5:... 79 7e-15
Medtr1g048080.1 | pentatricopeptide (PPR) repeat protein | HC | ... 79 8e-15
Medtr3g100600.1 | PPR containing plant-like protein | HC | chr3:... 79 9e-15
Medtr5g029690.1 | PPR containing plant-like protein | HC | chr5:... 78 1e-14
Medtr7g066990.2 | pentatricopeptide (PPR) repeat protein | HC | ... 78 1e-14
Medtr7g066990.1 | pentatricopeptide (PPR) repeat protein | HC | ... 78 1e-14
Medtr3g448620.1 | pentatricopeptide (PPR) repeat protein | LC | ... 78 1e-14
Medtr0177s0060.1 | pentatricopeptide (PPR) repeat protein | LC |... 78 1e-14
Medtr4g075270.1 | PPR containing plant-like protein | HC | chr4:... 78 2e-14
Medtr1g035250.1 | PPR containing plant-like protein | HC | chr1:... 77 2e-14
Medtr7g451470.1 | PPR containing plant-like protein | LC | chr7:... 77 2e-14
Medtr7g076550.1 | pentatricopeptide (PPR) repeat protein | HC | ... 77 3e-14
Medtr3g114700.1 | PPR containing plant-like protein | HC | chr3:... 77 3e-14
Medtr7g017570.1 | PPR containing plant protein | HC | chr7:56046... 77 3e-14
Medtr8g083130.1 | pentatricopeptide (PPR) repeat protein | HC | ... 77 3e-14
Medtr6g065540.1 | pentatricopeptide (PPR) repeat protein | HC | ... 77 3e-14
Medtr0429s0020.1 | pentatricopeptide (PPR) repeat protein | LC |... 77 4e-14
Medtr4g094688.1 | PPR containing plant protein | HC | chr4:38731... 76 4e-14
Medtr6g078190.1 | pentatricopeptide (PPR) repeat protein | LC | ... 76 4e-14
Medtr8g070060.1 | pentatricopeptide (PPR) repeat protein | HC | ... 76 4e-14
Medtr4g107180.1 | pentatricopeptide (PPR) repeat protein | LC | ... 76 5e-14
Medtr6g065560.1 | PPR containing plant-like protein | LC | chr6:... 76 6e-14
Medtr0654s0010.1 | pentatricopeptide (PPR) repeat protein | HC |... 75 7e-14
Medtr2g437460.1 | pentatricopeptide (PPR) repeat protein | HC | ... 75 1e-13
Medtr2g102210.1 | PPR containing plant-like protein | HC | chr2:... 75 1e-13
Medtr1g100593.1 | PPR containing plant-like protein | HC | chr1:... 75 1e-13
Medtr1g100593.2 | PPR containing plant-like protein | HC | chr1:... 75 1e-13
Medtr8g071970.1 | PPR containing plant-like protein | HC | chr8:... 74 2e-13
Medtr8g071300.1 | PPR containing plant-like protein | HC | chr8:... 74 2e-13
Medtr5g094770.1 | PPR containing plant-like protein | HC | chr5:... 74 2e-13
Medtr6g445320.1 | pentatricopeptide (PPR) repeat protein | LC | ... 74 3e-13
Medtr2g036080.1 | PPR containing plant-like protein | HC | chr2:... 74 3e-13
Medtr1g010020.2 | PPR containing plant-like protein | HC | chr1:... 74 3e-13
Medtr1g010020.1 | PPR containing plant-like protein | HC | chr1:... 73 3e-13
Medtr3g088950.1 | pentatricopeptide (PPR) repeat protein, putati... 73 3e-13
Medtr2g094423.1 | PPR containing plant-like protein | LC | chr2:... 73 4e-13
Medtr2g026635.1 | pentatricopeptide (PPR) repeat protein | HC | ... 73 5e-13
Medtr2g036560.1 | PPR containing plant-like protein | HC | chr2:... 73 5e-13
Medtr0051s0090.1 | pentatricopeptide (PPR) repeat protein | LC |... 73 5e-13
Medtr0014s0180.1 | pentatricopeptide (PPR) repeat protein | LC |... 72 7e-13
Medtr3g091500.1 | pentatricopeptide (PPR) repeat protein | LC | ... 72 8e-13
Medtr2g030540.1 | PPR containing plant-like protein | HC | chr2:... 71 1e-12
Medtr4g107210.1 | PPR containing plant-like protein | HC | chr4:... 71 2e-12
Medtr3g083680.1 | PPR containing plant-like protein | HC | chr3:... 71 2e-12
Medtr6g445300.1 | pentatricopeptide (PPR) repeat protein | HC | ... 70 2e-12
Medtr7g017530.1 | PPR containing plant protein | HC | chr7:55963... 70 2e-12
Medtr3g053350.1 | PPR containing plant-like protein | HC | chr3:... 70 2e-12
Medtr3g053350.2 | PPR containing plant-like protein | HC | chr3:... 70 2e-12
Medtr2g069700.1 | PPR containing plant-like protein | LC | chr2:... 70 3e-12
Medtr6g079430.1 | pentatricopeptide (PPR) repeat protein | HC | ... 70 3e-12
Medtr8g089700.1 | PPR containing plant-like protein | HC | chr8:... 70 4e-12
Medtr6g082970.1 | pentatricopeptide (PPR) repeat protein | LC | ... 70 4e-12
Medtr4g072990.1 | PPR containing plant-like protein | HC | chr4:... 69 5e-12
Medtr0572s0010.1 | pentatricopeptide (PPR) repeat protein | LC |... 69 5e-12
Medtr4g133740.1 | pentatricopeptide (PPR) repeat protein | HC | ... 69 5e-12
Medtr5g043790.1 | PPR repeat protein | LC | chr5:19242401-192435... 69 6e-12
Medtr4g072990.2 | PPR containing plant-like protein | HC | chr4:... 69 6e-12
Medtr7g044790.1 | PPR containing plant-like protein | HC | chr7:... 69 6e-12
Medtr3g078580.1 | PPR containing plant-like protein | HC | chr3:... 69 7e-12
Medtr1g112240.1 | PPR containing plant-like protein | HC | chr1:... 69 7e-12
Medtr7g118240.1 | PPR containing plant-like protein | HC | chr7:... 69 9e-12
Medtr7g011520.1 | pentatricopeptide (PPR) repeat protein | LC | ... 68 1e-11
Medtr3g088505.3 | PPR containing plant-like protein | HC | chr3:... 68 1e-11
Medtr3g088505.1 | PPR containing plant-like protein | HC | chr3:... 68 1e-11
Medtr3g088505.2 | PPR containing plant-like protein | HC | chr3:... 68 1e-11
Medtr3g088505.4 | PPR containing plant-like protein | HC | chr3:... 68 1e-11
Medtr7g025610.1 | PPR containing plant-like protein, putative | ... 68 1e-11
Medtr8g070050.1 | pentatricopeptide (PPR) repeat protein | HC | ... 68 1e-11
Medtr1g016220.1 | PPR containing plant-like protein | LC | chr1:... 68 1e-11
Medtr6g079290.1 | pentatricopeptide (PPR) repeat protein | HC | ... 68 2e-11
Medtr1g016213.1 | pentatricopeptide (PPR) repeat protein | LC | ... 68 2e-11
Medtr5g045490.1 | PPR containing plant-like protein | HC | chr5:... 67 2e-11
Medtr5g039700.1 | PPR containing plant-like protein | HC | chr5:... 67 2e-11
Medtr8g080940.1 | PPR containing plant-like protein | HC | chr8:... 67 2e-11
Medtr7g095300.1 | pentatricopeptide (PPR) repeat protein | LC | ... 67 2e-11
Medtr7g095380.1 | PPR repeat protein | HC | chr7:38183678-381831... 67 3e-11
Medtr8g080940.2 | PPR containing plant-like protein | HC | chr8:... 67 3e-11
Medtr5g018230.2 | PPR containing plant-like protein | HC | chr5:... 67 4e-11
Medtr5g018230.1 | PPR containing plant-like protein | HC | chr5:... 67 4e-11
Medtr1g114300.1 | PPR containing plant-like protein | HC | chr1:... 66 4e-11
Medtr2g037740.1 | PPR containing plant-like protein | HC | chr2:... 65 8e-11
Medtr2g018550.1 | pentatricopeptide (PPR) repeat protein | HC | ... 65 9e-11
Medtr8g005870.1 | PPR containing plant-like protein | HC | chr8:... 65 9e-11
Medtr2g026645.1 | pentatricopeptide (PPR) repeat protein | HC | ... 65 9e-11
Medtr6g079270.1 | pentatricopeptide (PPR) repeat protein | HC | ... 65 1e-10
Medtr6g079460.1 | pentatricopeptide (PPR) repeat protein | LC | ... 65 1e-10
Medtr1g114190.1 | pentatricopeptide (PPR) repeat protein, putati... 65 1e-10
Medtr1g064390.1 | pentatricopeptide (PPR) repeat protein | LC | ... 65 1e-10
Medtr7g070420.1 | PPR containing plant-like protein | HC | chr7:... 65 1e-10
Medtr6g005000.1 | PPR containing plant-like protein | HC | chr6:... 65 1e-10
>Medtr7g105440.1 | PPR containing plant-like protein | HC |
chr7:42760641-42762768 | 20130731
Length = 589
Score = 575 bits (1482), Expect = e-164, Method: Compositional matrix adjust.
Identities = 275/330 (83%), Positives = 301/330 (91%), Gaps = 1/330 (0%)
Query: 1 MPQRNVASWNAMLCGFVKDGDLSSARGVFDAMPEKNVVSFTTMIDGYAKAGDMAAARFLF 60
MP RNVASWNAM+ GFVK GDLSSARGVFD+MPEKNVVSFTTMIDGYAKAGDM ++RFLF
Sbjct: 207 MPLRNVASWNAMIRGFVKVGDLSSARGVFDSMPEKNVVSFTTMIDGYAKAGDMESSRFLF 266
Query: 61 EQATEKDVVAWSALISGYVQNGQPNQALKVFLEMESKNVKPDEFILVSLMSATSQLGHLE 120
EQA EKDVVAWSALISGYVQNG+ N+ALKVFLEMES V PDEF+LVSLMSA SQLG L+
Sbjct: 267 EQAAEKDVVAWSALISGYVQNGEANEALKVFLEMESMKVIPDEFVLVSLMSAASQLGDLK 326
Query: 121 LAQWVDSYVSKSSIDLQQDHVIAALLDMNAKCGNMDRALKLFKEMPKRDLVSYCSMIQGL 180
LAQ VDSYV SSIDLQQD+VI+AL+DMNAKCGNM+RALKLF+EMPKRDLVSYCSMI G
Sbjct: 327 LAQRVDSYVDNSSIDLQQDYVISALVDMNAKCGNMERALKLFREMPKRDLVSYCSMIHGF 386
Query: 181 SIHGCGEDAVRLFNSMLMEGLVPDEVAFTIILTACSHSGLVDEGWNYFQSMKQKYGISPS 240
SIHG GEDAV LFN MLMEG+VPDE AFTI+LTACSHSGLVD+GW YF SM++ YGISP+
Sbjct: 387 SIHGHGEDAVNLFNRMLMEGIVPDEAAFTIVLTACSHSGLVDKGWKYFNSMEENYGISPT 446
Query: 241 PDHFACMVDLLSRSGHLGDAYELMKSMH-EPHAGAWGALLGACKLHGDSDLGEIVANQLF 299
PDHFACMVDLL RSG L DAYEL+KSMH EP+AGAWGAL+GACKLHGD++LGEIVAN+LF
Sbjct: 447 PDHFACMVDLLGRSGQLRDAYELIKSMHIEPNAGAWGALIGACKLHGDTELGEIVANRLF 506
Query: 300 ELEPQNAANYILLSNIYAAAERWIDVSLVR 329
ELEPQNAANY+LLSNIYAAA RW DVSLVR
Sbjct: 507 ELEPQNAANYVLLSNIYAAAGRWKDVSLVR 536
Score = 98.2 bits (243), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 75/296 (25%), Positives = 154/296 (52%), Gaps = 27/296 (9%)
Query: 28 VFDAMPEKNVVSFTTMIDGYAKAGDMAAARFLFEQATEKDVVAWSALISGYVQNGQPNQA 87
VF ++++ TT++D Y K G++ AR +F++ ++++VV+W+A++ GYV G +A
Sbjct: 141 VFRCGLDQDLFVGTTLVDMYGKCGEIGDARKVFDELSDRNVVSWTAMVVGYVTAGDVVEA 200
Query: 88 LKVFLEMESKNVKPDEFILVSLMSATSQLGHLELAQWV-DSYVSKSSIDLQQDHVIAALL 146
KVF EM +NV +++ ++G L A+ V DS K+ + ++
Sbjct: 201 KKVFDEMPLRNVASWN----AMIRGFVKVGDLSSARGVFDSMPEKNVVSF------TTMI 250
Query: 147 DMNAKCGNMDRALKLFKEMPKRDLVSYCSMIQGLSIHGCGEDAVRLFNSMLMEGLVPDEV 206
D AK G+M+ + LF++ ++D+V++ ++I G +G +A+++F M ++PDE
Sbjct: 251 DGYAKAGDMESSRFLFEQAAEKDVVAWSALISGYVQNGEANEALKVFLEMESMKVIPDEF 310
Query: 207 AFTIILTACSHSG---LVDEGWNYFQS----MKQKYGISPSPDHFACMVDLLSRSGHLGD 259
+++A S G L +Y + ++Q Y IS +VD+ ++ G++
Sbjct: 311 VLVSLMSAASQLGDLKLAQRVDSYVDNSSIDLQQDYVISA-------LVDMNAKCGNMER 363
Query: 260 AYELMKSMHEPHAGAWGALLGACKLHGDSDLGEIVANQLF--ELEPQNAANYILLS 313
A +L + M + ++ +++ +HG + + N++ + P AA I+L+
Sbjct: 364 ALKLFREMPKRDLVSYCSMIHGFSIHGHGEDAVNLFNRMLMEGIVPDEAAFTIVLT 419
Score = 72.8 bits (177), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 52/231 (22%), Positives = 105/231 (45%), Gaps = 10/231 (4%)
Query: 59 LFEQATEKDVVAWSALISGYVQNGQPNQALKVFLEMESKNVKPDEFILVSLMSATSQLGH 118
+F + W+ I + Q+ + + F+ M+++ PD + S++ A S
Sbjct: 71 VFNRVLNPSTFLWNTFIRTHCQSSFFSDTISAFIRMKAEGAVPDSYTYPSVIKACSGTCK 130
Query: 119 LELAQWVDSYVSKSSIDLQQDHVIAALLDMNAKCGNMDRALKLFKEMPKRDLVSYCSMIQ 178
+ + + V V + +D Q V L+DM KCG + A K+F E+ R++VS+ +M+
Sbjct: 131 VLVGKSVHGSVFRCGLD-QDLFVGTTLVDMYGKCGEIGDARKVFDELSDRNVVSWTAMVV 189
Query: 179 GLSIHGCGEDAVRLFNSMLMEGLVPDEVAFTIILTACSHSGLVDEGWNYFQSMKQKYGIS 238
G G +A ++F+ M + + ++ ++ G + F SM +K +S
Sbjct: 190 GYVTAGDVVEAKKVFDEMPLRNV----ASWNAMIRGFVKVGDLSSARGVFDSMPEKNVVS 245
Query: 239 PSPDHFACMVDLLSRSGHLGDAYELMKSMHEPHAGAWGALLGACKLHGDSD 289
F M+D +++G + + L + E AW AL+ +G+++
Sbjct: 246 -----FTTMIDGYAKAGDMESSRFLFEQAAEKDVVAWSALISGYVQNGEAN 291
>Medtr7g105540.1 | PPR containing plant-like protein | HC |
chr7:42802997-42805935 | 20130731
Length = 596
Score = 568 bits (1465), Expect = e-162, Method: Compositional matrix adjust.
Identities = 269/330 (81%), Positives = 299/330 (90%), Gaps = 1/330 (0%)
Query: 1 MPQRNVASWNAMLCGFVKDGDLSSARGVFDAMPEKNVVSFTTMIDGYAKAGDMAAARFLF 60
MP RNVASWNAM+ GFVK GDLSSARGVFD+MPEKNVVSFTTM+DGYAKAGDM ++RFLF
Sbjct: 207 MPLRNVASWNAMIRGFVKVGDLSSARGVFDSMPEKNVVSFTTMVDGYAKAGDMESSRFLF 266
Query: 61 EQATEKDVVAWSALISGYVQNGQPNQALKVFLEMESKNVKPDEFILVSLMSATSQLGHLE 120
EQA EKDVV WSALISGYVQNG+ N+ALKVFLEMES NV PDEF+LV LMSA SQLG L+
Sbjct: 267 EQAAEKDVVTWSALISGYVQNGEANEALKVFLEMESMNVIPDEFVLVGLMSAASQLGDLK 326
Query: 121 LAQWVDSYVSKSSIDLQQDHVIAALLDMNAKCGNMDRALKLFKEMPKRDLVSYCSMIQGL 180
LAQ VDSYV +SIDLQ+DHVI+AL+DMNAKCGNM+RALKLF+EMP+RDLVSYCSMI G
Sbjct: 327 LAQRVDSYVGNNSIDLQKDHVISALVDMNAKCGNMERALKLFQEMPERDLVSYCSMIHGF 386
Query: 181 SIHGCGEDAVRLFNSMLMEGLVPDEVAFTIILTACSHSGLVDEGWNYFQSMKQKYGISPS 240
SIHG GEDAV LFN MLMEG+VPDE AFTI+LTACSHSGL+D+GW YF SM++ YGISP+
Sbjct: 387 SIHGHGEDAVNLFNRMLMEGIVPDEAAFTIVLTACSHSGLIDKGWKYFNSMEENYGISPT 446
Query: 241 PDHFACMVDLLSRSGHLGDAYELMKSMH-EPHAGAWGALLGACKLHGDSDLGEIVANQLF 299
PDHFACMVDLL RSG L DAYEL+KSMH EP+AGAWGAL+GACKL GD++LGEIVAN+LF
Sbjct: 447 PDHFACMVDLLGRSGQLRDAYELIKSMHIEPNAGAWGALIGACKLQGDTELGEIVANRLF 506
Query: 300 ELEPQNAANYILLSNIYAAAERWIDVSLVR 329
ELEPQNAANY+LLSNIYAAA RW DVSLVR
Sbjct: 507 ELEPQNAANYVLLSNIYAAAGRWKDVSLVR 536
Score = 99.4 bits (246), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 76/290 (26%), Positives = 148/290 (51%), Gaps = 15/290 (5%)
Query: 28 VFDAMPEKNVVSFTTMIDGYAKAGDMAAARFLFEQATEKDVVAWSALISGYVQNGQPNQA 87
VF ++++ TT+ID Y K G ++ AR +F + TE++VV+W+A++ GYV G +A
Sbjct: 141 VFRCGLDQDLFMGTTLIDMYGKCGQISDARKVFNELTERNVVSWTAMVVGYVTAGDVVKA 200
Query: 88 LKVFLEMESKNVKPDEFILVSLMSATSQLGHLELAQWV-DSYVSKSSIDLQQDHVIAALL 146
KVF M +NV +++ ++G L A+ V DS K+ + ++
Sbjct: 201 KKVFDGMPLRNVASWN----AMIRGFVKVGDLSSARGVFDSMPEKNVVSF------TTMV 250
Query: 147 DMNAKCGNMDRALKLFKEMPKRDLVSYCSMIQGLSIHGCGEDAVRLFNSMLMEGLVPDEV 206
D AK G+M+ + LF++ ++D+V++ ++I G +G +A+++F M ++PDE
Sbjct: 251 DGYAKAGDMESSRFLFEQAAEKDVVTWSALISGYVQNGEANEALKVFLEMESMNVIPDEF 310
Query: 207 AFTIILTACSHSGLVDEGWNYFQSMKQKYGISPSPDH-FACMVDLLSRSGHLGDAYELMK 265
+++A S G + S I DH + +VD+ ++ G++ A +L +
Sbjct: 311 VLVGLMSAASQLGDLKLA-QRVDSYVGNNSIDLQKDHVISALVDMNAKCGNMERALKLFQ 369
Query: 266 SMHEPHAGAWGALLGACKLHGDSDLGEIVANQLF--ELEPQNAANYILLS 313
M E ++ +++ +HG + + N++ + P AA I+L+
Sbjct: 370 EMPERDLVSYCSMIHGFSIHGHGEDAVNLFNRMLMEGIVPDEAAFTIVLT 419
Score = 72.8 bits (177), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 60/272 (22%), Positives = 121/272 (44%), Gaps = 14/272 (5%)
Query: 59 LFEQATEKDVVAWSALISGYVQNGQPNQALKVFLEMESKNVKPDEFILVSLMSATSQLGH 118
+F + W+ I + Q+ + + F+ M+++ PD + S++ A S
Sbjct: 71 VFNRVLNPSTFLWNTFIRTHCQSSFFSDTISAFIRMKAEGAVPDSYTYPSVIKACSGTCK 130
Query: 119 LELAQWVDSYVSKSSIDLQQDHVIAALLDMNAKCGNMDRALKLFKEMPKRDLVSYCSMIQ 178
+ + + V V + +D Q + L+DM KCG + A K+F E+ +R++VS+ +M+
Sbjct: 131 VLVGKSVHGSVFRCGLD-QDLFMGTTLIDMYGKCGQISDARKVFNELTERNVVSWTAMVV 189
Query: 179 GLSIHGCGEDAVRLFNSMLMEGLVPDEVAFTIILTACSHSGLVDEGWNYFQSMKQKYGIS 238
G G A ++F+ M + + ++ ++ G + F SM +K +S
Sbjct: 190 GYVTAGDVVKAKKVFDGMPLRNV----ASWNAMIRGFVKVGDLSSARGVFDSMPEKNVVS 245
Query: 239 PSPDHFACMVDLLSRSGHLGDAYELMKSMHEPHAGAWGALLGACKLHGDSDLGEIVANQL 298
F MVD +++G + + L + E W AL+ +G+++ V
Sbjct: 246 -----FTTMVDGYAKAGDMESSRFLFEQAAEKDVVTWSALISGYVQNGEANEALKV---F 297
Query: 299 FELEPQNA-ANYILLSNIYAAAERWIDVSLVR 329
E+E N + +L + +AA + D+ L +
Sbjct: 298 LEMESMNVIPDEFVLVGLMSAASQLGDLKLAQ 329
>Medtr8g086040.1 | pentatricopeptide (PPR) repeat protein | HC |
chr8:35708903-35705786 | 20130731
Length = 616
Score = 313 bits (802), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 155/337 (45%), Positives = 219/337 (64%), Gaps = 2/337 (0%)
Query: 10 NAMLCGFVKDGDLSSARGVFDAMPEKNVVSFTTMIDGYAKAGDMAAARFLFEQATEKDVV 69
N ++ +VK G L AR VFD MP ++VV++T +I YA++GDM +A LF KD+V
Sbjct: 148 NTIIHMYVKFGVLDCARKVFDEMPHRDVVTWTELIVAYARSGDMDSACELFVGLPVKDMV 207
Query: 70 AWSALISGYVQNGQPNQALKVFLEMESKNVKPDEFILVSLMSATSQLGHLELAQWVDSYV 129
AW+++++GY QN P +AL+ F +M V DE LV +SA +QLG A W+
Sbjct: 208 AWTSMVTGYSQNAMPKKALQFFRKMREAGVVTDEITLVGAISACAQLGVSGYADWIREIA 267
Query: 130 SKSSIDLQQD-HVIAALLDMNAKCGNMDRALKLFKEMPKRDLVSYCSMIQGLSIHGCGED 188
S + V +AL+DM +KCGN++ A +FK M + ++ SY SMI G ++HG
Sbjct: 268 ESSRFGSGSNVFVGSALIDMYSKCGNVEEAYNVFKGMKEMNVFSYSSMIVGFAVHGRARS 327
Query: 189 AVRLFNSMLMEGLVPDEVAFTIILTACSHSGLVDEGWNYFQSMKQKYGISPSPDHFACMV 248
A++LF ML G+ P+ V F + TACSH+G+V++G F +MK+ YG+SP+ DH+ACM
Sbjct: 328 AIKLFYEMLENGIKPNHVTFVGLFTACSHAGMVEQGQQLFGAMKECYGVSPTADHYACMA 387
Query: 249 DLLSRSGHLGDAYELMKSM-HEPHAGAWGALLGACKLHGDSDLGEIVANQLFELEPQNAA 307
DLL R+GHL A +L+++M EP+ G WGALLGA +HG+ D+ EI + LFELEP N
Sbjct: 388 DLLGRAGHLEKALQLVQTMPMEPNGGVWGALLGASHIHGNPDVAEIASRSLFELEPDNLG 447
Query: 308 NYILLSNIYAAAERWIDVSLVRSRMRERSVQKIPGCS 344
NY+LLS YA A +W DVS VR MRE+ ++K PGCS
Sbjct: 448 NYLLLSKTYALAAKWDDVSRVRKLMREKQLRKNPGCS 484
Score = 86.3 bits (212), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 66/260 (25%), Positives = 121/260 (46%), Gaps = 32/260 (12%)
Query: 57 RFLFEQATEKDVVAWSALISGYVQNGQPNQALKVFLEMESKNVKPDEFI---LVSLMSAT 113
LF Q + +SALI Y +NG + +++++ M + NV P F L SL+
Sbjct: 66 HLLFSQVHSPNPFLYSALIRAYARNGPFHHSIRLYTSMLNNNVSPVSFTFSALFSLLKNP 125
Query: 114 SQLGHLELAQWV-----DSYVSKSSIDL------------------QQDHVI-AALLDMN 149
S L L ++ D YV + I + +D V L+
Sbjct: 126 SLGSQLHLHAFLFGFVNDLYVGNTIIHMYVKFGVLDCARKVFDEMPHRDVVTWTELIVAY 185
Query: 150 AKCGNMDRALKLFKEMPKRDLVSYCSMIQGLSIHGCGEDAVRLFNSMLMEGLVPDEVAFT 209
A+ G+MD A +LF +P +D+V++ SM+ G S + + A++ F M G+V DE+
Sbjct: 186 ARSGDMDSACELFVGLPVKDMVAWTSMVTGYSQNAMPKKALQFFRKMREAGVVTDEITLV 245
Query: 210 IILTACSH---SGLVDEGWNYFQSMKQKYGISPSPDHFACMVDLLSRSGHLGDAYELMKS 266
++AC+ SG D W + ++G + + ++D+ S+ G++ +AY + K
Sbjct: 246 GAISACAQLGVSGYAD--WIREIAESSRFGSGSNVFVGSALIDMYSKCGNVEEAYNVFKG 303
Query: 267 MHEPHAGAWGALLGACKLHG 286
M E + ++ +++ +HG
Sbjct: 304 MKEMNVFSYSSMIVGFAVHG 323
>Medtr4g119120.1 | PPR containing plant-like protein | HC |
chr4:49335688-49337418 | 20130731
Length = 576
Score = 310 bits (794), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 160/347 (46%), Positives = 230/347 (66%), Gaps = 5/347 (1%)
Query: 1 MPQRNVASWNAMLCGFVKDGDLSSARGVFDAMPEKNVVSFTTMIDGYAKAGDMAAARFLF 60
MP+RN ASWN M+ G+V G + AR +FDAMP +N VS TMI GY+K+GD+ +AR LF
Sbjct: 227 MPERNFASWNTMITGYVDCGSIVEARELFDAMPRRNSVSLITMIAGYSKSGDVHSARELF 286
Query: 61 EQATEKDVVAWSALISGYVQNGQPNQALKVFLEM--ESKNVKPDEFILVSLMSATSQLGH 118
+Q +KD+++++A+I+ Y Q+ +P +AL +F M ++ PD+ L S++SA SQLG+
Sbjct: 287 DQMDDKDLLSYNAMIACYAQSSKPKEALDLFNVMLKPDSSLHPDKMTLASVISACSQLGN 346
Query: 119 LELAQWVDSYVSKSSIDLQQDHVIAALLDMNAKCGNMDRALKLFKEMPKRDLVSYCSMIQ 178
LE +W++S ++ I L DH+ AL+D+ AKCG++D+A +LF + KRD+V+Y +MI
Sbjct: 347 LEHWRWIESQINNFGIVL-DDHLATALIDLYAKCGSIDKAYELFHGLRKRDVVAYSAMIY 405
Query: 179 GLSIHGCGEDAVRLFNSMLMEGLVPDEVAFTIILTACSHSGLVDEGWNYFQSMKQKYGIS 238
G I+G DAV LF M E ++P+ V +T ILTA +H+GL +EG+ F SMK GI
Sbjct: 406 GCGINGRASDAVELFERMAGECIIPNLVTYTGILTAYNHAGLAEEGYRCFISMKDN-GIV 464
Query: 239 PSPDHFACMVDLLSRSGHLGDAYEL-MKSMHEPHAGAWGALLGACKLHGDSDLGEIVANQ 297
PS DH+ MVDLL R+G L +AY+L MK +P+ G WGALL AC+LH + LGEI
Sbjct: 465 PSVDHYGIMVDLLGRAGWLDEAYKLIMKMPMQPNVGVWGALLLACRLHDNLKLGEIAVQH 524
Query: 298 LFELEPQNAANYILLSNIYAAAERWIDVSLVRSRMRERSVQKIPGCS 344
+LE + A Y LLS IYA +W D + + + + + KIPGCS
Sbjct: 525 CIKLESETAGYYSLLSGIYATVGKWNDAKKLTTGVEGKKIIKIPGCS 571
Score = 142 bits (357), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 95/323 (29%), Positives = 158/323 (48%), Gaps = 46/323 (14%)
Query: 1 MPQRNVASWNAMLCGFVKDGDLSSARGVFDAMPEKNVVSFTTMIDGYAKAGDMAAARFLF 60
MP +NV SWN++L G++K G+L + FD +P K+V+S+ M+ GYAKAG M A +LF
Sbjct: 165 MPDKNVVSWNSLLSGYIKGGNLDEGQRFFDEIPLKDVISWNCMVSGYAKAGKMDRACYLF 224
Query: 61 EQATEKDVVAWSALISGYVQNGQPNQALKVFLEMESKNVKPDEFILVSLMSATSQLGHLE 120
+Q E++ +W+ +I+GYV G +A ++F M +N L+++++ S
Sbjct: 225 QQMPERNFASWNTMITGYVDCGSIVEARELFDAMPRRN----SVSLITMIAGYS------ 274
Query: 121 LAQWVDSYVSKSSIDLQQDHVIAALLDMNAKCGNMDRALKLFKEMPKRDLVSYCSMIQGL 180
K G++ A +LF +M +DL+SY +MI
Sbjct: 275 ------------------------------KSGDVHSARELFDQMDDKDLLSYNAMIACY 304
Query: 181 SIHGCGEDAVRLFNSMLM--EGLVPDEVAFTIILTACSHSGLVDEGWNYFQSMKQKYGIS 238
+ ++A+ LFN ML L PD++ +++ACS G + E W + +S +GI
Sbjct: 305 AQSSKPKEALDLFNVMLKPDSSLHPDKMTLASVISACSQLGNL-EHWRWIESQINNFGIV 363
Query: 239 PSPDHFAC-MVDLLSRSGHLGDAYELMKSMHEPHAGAWGALLGACKLHGD-SDLGEIVAN 296
DH A ++DL ++ G + AYEL + + A+ A++ C ++G SD E+
Sbjct: 364 LD-DHLATALIDLYAKCGSIDKAYELFHGLRKRDVVAYSAMIYGCGINGRASDAVELFER 422
Query: 297 QLFELEPQNAANYILLSNIYAAA 319
E N Y + Y A
Sbjct: 423 MAGECIIPNLVTYTGILTAYNHA 445
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 64/272 (23%), Positives = 114/272 (41%), Gaps = 49/272 (18%)
Query: 59 LFEQATEKDVVAWSALISGYVQNGQPNQALKVFLEMESKNVKPDEFILVSLMSATSQLGH 118
+ D +W +I + Q GQ +A+ ++++M + P + S++ + +++
Sbjct: 60 ILHHLRNPDSFSWGCVIRFFSQKGQFVEAVSLYVQMRRIGLCPSSHAVSSILKSCARVED 119
Query: 119 LELAQWVDSYVSKSSIDLQQDHVIAALLDMNAKCGNMDRALKLFKEMPKRDLVSYCSMIQ 178
+ +V K D +V ALLD+ K G++ A K+F EMP +++VS+ S++
Sbjct: 120 DLCGLLIHGHVHKFGFDACV-YVQTALLDLYCKIGDVVTARKVFDEMPDKNVVSWNSLLS 178
Query: 179 GLSIHGCGEDAVRLFNSMLMEGLVPDEVAFTIILTACSHSGLVDEGWNYFQSMKQKYGIS 238
G I G G +DEG +F + K IS
Sbjct: 179 GY-IKG----------------------------------GNLDEGQRFFDEIPLKDVIS 203
Query: 239 PSPDHFACMVDLLSRSGHLGDAYELMKSMHEPHAGAWGALLGACKLHGDSDLGEIV-ANQ 297
+ CMV +++G + A L + M E + +W ++ G D G IV A +
Sbjct: 204 -----WNCMVSGYAKAGKMDRACYLFQQMPERNFASWNTMIT-----GYVDCGSIVEARE 253
Query: 298 LFELEPQNAANYILLSNIYAAAERWIDVSLVR 329
LF+ P+ N + L + A + DV R
Sbjct: 254 LFDAMPRR--NSVSLITMIAGYSKSGDVHSAR 283
>Medtr7g093900.2 | PPR containing plant-like protein | HC |
chr7:37366165-37359102 | 20130731
Length = 663
Score = 304 bits (779), Expect = 6e-83, Method: Compositional matrix adjust.
Identities = 149/336 (44%), Positives = 220/336 (65%), Gaps = 1/336 (0%)
Query: 10 NAMLCGFVKDGDLSSARGVFDAMPEKNVVSFTTMIDGYAKAGDMAAARFLFEQATEKDVV 69
NA+L +VK L AR +FD M K+V S+T+M++GYAK GD+ +AR F+Q K+ V
Sbjct: 284 NALLDMYVKCDCLVDARELFDRMATKDVYSWTSMVNGYAKCGDLESARRFFDQTPRKNAV 343
Query: 70 AWSALISGYVQNGQPNQALKVFLEMESKNVKPDEFILVSLMSATSQLGHLELAQWVDSYV 129
WSA+I+GY QN +P ++LK+F EM + V P E LVS++SA QL L L W+ Y
Sbjct: 344 CWSAMIAGYSQNNKPKESLKLFHEMMERGVVPIEHTLVSVLSACGQLTCLNLGDWIHQYF 403
Query: 130 SKSSIDLQQDHVIAALLDMNAKCGNMDRALKLFKEMPKRDLVSYCSMIQGLSIHGCGEDA 189
I + A++DM AKCG++D A ++F MP+R+L+S+ +MI G + +G + A
Sbjct: 404 VVGKIIPLSVTLENAIVDMYAKCGSIDAATEVFSTMPERNLISWNTMIAGYAANGRAKQA 463
Query: 190 VRLFNSMLMEGLVPDEVAFTIILTACSHSGLVDEGWNYFQSMKQKYGISPSPDHFACMVD 249
+ +F+ M G P+ + F +LTACSH GL+ EG YF +M++KYGI P H+ACMVD
Sbjct: 464 INVFDQMRNMGFEPNNITFVSLLTACSHGGLISEGREYFDNMERKYGIKPERGHYACMVD 523
Query: 250 LLSRSGHLGDAYELMKSM-HEPHAGAWGALLGACKLHGDSDLGEIVANQLFELEPQNAAN 308
LL R+G L +AY+L+ +M +P AWGALL AC++HG+ +L + A+ L L+P+++
Sbjct: 524 LLGRTGLLEEAYKLIANMPMQPCEAAWGALLNACRMHGNVELARLSAHNLLRLDPEDSGI 583
Query: 309 YILLSNIYAAAERWIDVSLVRSRMRERSVQKIPGCS 344
Y+LL+N A +W DV VRS M+++ V+KIPG S
Sbjct: 584 YVLLANTCANDRKWSDVRRVRSLMKDKGVKKIPGYS 619
Score = 98.2 bits (243), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 84/337 (24%), Positives = 152/337 (45%), Gaps = 65/337 (19%)
Query: 10 NAMLCGFVKDGDLSSARGVFDAMPEKNVVSFTTMIDGYAKAGDMAAARFLFEQATEKDVV 69
N ++ + + G L +AR VFD +K+VV++TTMIDGYA A D +
Sbjct: 183 NGLIHFYAERGLLKNARQVFDESSDKDVVTWTTMIDGYA-AHDCS--------------- 226
Query: 70 AWSALISGYVQNGQPNQALKVFLEMESKNVKPDEFILVSLMSATSQLGHLELAQWVDSYV 129
+A++VF M +V+P+E L++++SA S +G+LE+ + V V
Sbjct: 227 ---------------EEAMEVFELMLLSHVEPNEVTLIAVVSACSDMGNLEMGKRVHEKV 271
Query: 130 SKSSIDLQQDHVIAALLDM-------------------------------NAKCGNMDRA 158
+ ++ + ALLDM AKCG+++ A
Sbjct: 272 EEKNMRCSLS-LHNALLDMYVKCDCLVDARELFDRMATKDVYSWTSMVNGYAKCGDLESA 330
Query: 159 LKLFKEMPKRDLVSYCSMIQGLSIHGCGEDAVRLFNSMLMEGLVPDEVAFTIILTACSHS 218
+ F + P+++ V + +MI G S + +++++LF+ M+ G+VP E +L+AC
Sbjct: 331 RRFFDQTPRKNAVCWSAMIAGYSQNNKPKESLKLFHEMMERGVVPIEHTLVSVLSACGQL 390
Query: 219 GLVDEGWNYFQSMKQKYGISPSPDHFACMVDLLSRSGHLGDAYELMKSMHEPHAGAWGAL 278
++ G Q I S +VD+ ++ G + A E+ +M E + +W +
Sbjct: 391 TCLNLGDWIHQYFVVGKIIPLSVTLENAIVDMYAKCGSIDAATEVFSTMPERNLISWNTM 450
Query: 279 LGACKLHGDSDLGEIVANQLFEL--EPQNAANYILLS 313
+ +G + V +Q+ + EP N LL+
Sbjct: 451 IAGYAANGRAKQAINVFDQMRNMGFEPNNITFVSLLT 487
Score = 93.2 bits (230), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 70/280 (25%), Positives = 127/280 (45%), Gaps = 10/280 (3%)
Query: 28 VFDAMPEKNVVSFTTMIDGYAKAGDMAAARFLFEQATEKDVVAWSALISGYVQNGQPNQA 87
+ A P V++F + A +GD+ A +F + + + W+ +I GY +P A
Sbjct: 73 ITHAFPVSRVIAFCAL----AHSGDLHYAHTIFNRVEQPNTFMWNTMIRGYQNARKPIFA 128
Query: 88 LKVFLEMESKNVKPDEFILVSLMSATSQLGHLELAQWVDSYVSKSSIDLQQDHVIAALLD 147
F+ M V+ D V + A Q + + V V K D + V L+
Sbjct: 129 FSFFVYMFQLRVEMDSRSFVFALKACQQFETVFEGESVYCVVWKMGFDCEL-LVRNGLIH 187
Query: 148 MNAKCGNMDRALKLFKEMPKRDLVSYCSMIQGLSIHGCGEDAVRLFNSMLMEGLVPDEVA 207
A+ G + A ++F E +D+V++ +MI G + H C E+A+ +F ML+ + P+EV
Sbjct: 188 FYAERGLLKNARQVFDESSDKDVVTWTTMIDGYAAHDCSEEAMEVFELMLLSHVEPNEVT 247
Query: 208 FTIILTACSHSGLVDEGWNYFQSMKQKYGISPSPDHFACMVDLLSRSGHLGDAYELMKSM 267
+++ACS G ++ G + +++K H A ++D+ + L DA EL M
Sbjct: 248 LIAVVSACSDMGNLEMGKRVHEKVEEKNMRCSLSLHNA-LLDMYVKCDCLVDARELFDRM 306
Query: 268 HEPHAGAWGALLGACKLHGDSDLGEIVANQLFELEPQNAA 307
+W +++ GD + A + F+ P+ A
Sbjct: 307 ATKDVYSWTSMVNGYAKCGDLE----SARRFFDQTPRKNA 342
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/132 (25%), Positives = 64/132 (48%), Gaps = 12/132 (9%)
Query: 1 MPQRNVASWNAMLCGFVKDGDLSSARGVFDAMP----EKNVVSFTTMIDGYAKAGDMAAA 56
MP+RN+ SWN M+ G+ +G A VFD M E N ++F +++ + G ++
Sbjct: 439 MPERNLISWNTMIAGYAANGRAKQAINVFDQMRNMGFEPNNITFVSLLTACSHGGLISEG 498
Query: 57 RFLFEQATEKDVVA-----WSALISGYVQNGQPNQALKVFLEMESKNVKPDEFILVSLMS 111
R F+ K + ++ ++ + G +A K+ M ++P E +L++
Sbjct: 499 REYFDNMERKYGIKPERGHYACMVDLLGRTGLLEEAYKLIANMP---MQPCEAAWGALLN 555
Query: 112 ATSQLGHLELAQ 123
A G++ELA+
Sbjct: 556 ACRMHGNVELAR 567
>Medtr7g093900.1 | PPR containing plant-like protein | HC |
chr7:37365900-37360699 | 20130731
Length = 854
Score = 304 bits (779), Expect = 7e-83, Method: Compositional matrix adjust.
Identities = 149/336 (44%), Positives = 220/336 (65%), Gaps = 1/336 (0%)
Query: 10 NAMLCGFVKDGDLSSARGVFDAMPEKNVVSFTTMIDGYAKAGDMAAARFLFEQATEKDVV 69
NA+L +VK L AR +FD M K+V S+T+M++GYAK GD+ +AR F+Q K+ V
Sbjct: 234 NALLDMYVKCDCLVDARELFDRMATKDVYSWTSMVNGYAKCGDLESARRFFDQTPRKNAV 293
Query: 70 AWSALISGYVQNGQPNQALKVFLEMESKNVKPDEFILVSLMSATSQLGHLELAQWVDSYV 129
WSA+I+GY QN +P ++LK+F EM + V P E LVS++SA QL L L W+ Y
Sbjct: 294 CWSAMIAGYSQNNKPKESLKLFHEMMERGVVPIEHTLVSVLSACGQLTCLNLGDWIHQYF 353
Query: 130 SKSSIDLQQDHVIAALLDMNAKCGNMDRALKLFKEMPKRDLVSYCSMIQGLSIHGCGEDA 189
I + A++DM AKCG++D A ++F MP+R+L+S+ +MI G + +G + A
Sbjct: 354 VVGKIIPLSVTLENAIVDMYAKCGSIDAATEVFSTMPERNLISWNTMIAGYAANGRAKQA 413
Query: 190 VRLFNSMLMEGLVPDEVAFTIILTACSHSGLVDEGWNYFQSMKQKYGISPSPDHFACMVD 249
+ +F+ M G P+ + F +LTACSH GL+ EG YF +M++KYGI P H+ACMVD
Sbjct: 414 INVFDQMRNMGFEPNNITFVSLLTACSHGGLISEGREYFDNMERKYGIKPERGHYACMVD 473
Query: 250 LLSRSGHLGDAYELMKSM-HEPHAGAWGALLGACKLHGDSDLGEIVANQLFELEPQNAAN 308
LL R+G L +AY+L+ +M +P AWGALL AC++HG+ +L + A+ L L+P+++
Sbjct: 474 LLGRTGLLEEAYKLIANMPMQPCEAAWGALLNACRMHGNVELARLSAHNLLRLDPEDSGI 533
Query: 309 YILLSNIYAAAERWIDVSLVRSRMRERSVQKIPGCS 344
Y+LL+N A +W DV VRS M+++ V+KIPG S
Sbjct: 534 YVLLANTCANDRKWSDVRRVRSLMKDKGVKKIPGYS 569
Score = 98.2 bits (243), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 84/337 (24%), Positives = 152/337 (45%), Gaps = 65/337 (19%)
Query: 10 NAMLCGFVKDGDLSSARGVFDAMPEKNVVSFTTMIDGYAKAGDMAAARFLFEQATEKDVV 69
N ++ + + G L +AR VFD +K+VV++TTMIDGYA A D +
Sbjct: 133 NGLIHFYAERGLLKNARQVFDESSDKDVVTWTTMIDGYA-AHDCS--------------- 176
Query: 70 AWSALISGYVQNGQPNQALKVFLEMESKNVKPDEFILVSLMSATSQLGHLELAQWVDSYV 129
+A++VF M +V+P+E L++++SA S +G+LE+ + V V
Sbjct: 177 ---------------EEAMEVFELMLLSHVEPNEVTLIAVVSACSDMGNLEMGKRVHEKV 221
Query: 130 SKSSIDLQQDHVIAALLDM-------------------------------NAKCGNMDRA 158
+ ++ + ALLDM AKCG+++ A
Sbjct: 222 EEKNMRCSLS-LHNALLDMYVKCDCLVDARELFDRMATKDVYSWTSMVNGYAKCGDLESA 280
Query: 159 LKLFKEMPKRDLVSYCSMIQGLSIHGCGEDAVRLFNSMLMEGLVPDEVAFTIILTACSHS 218
+ F + P+++ V + +MI G S + +++++LF+ M+ G+VP E +L+AC
Sbjct: 281 RRFFDQTPRKNAVCWSAMIAGYSQNNKPKESLKLFHEMMERGVVPIEHTLVSVLSACGQL 340
Query: 219 GLVDEGWNYFQSMKQKYGISPSPDHFACMVDLLSRSGHLGDAYELMKSMHEPHAGAWGAL 278
++ G Q I S +VD+ ++ G + A E+ +M E + +W +
Sbjct: 341 TCLNLGDWIHQYFVVGKIIPLSVTLENAIVDMYAKCGSIDAATEVFSTMPERNLISWNTM 400
Query: 279 LGACKLHGDSDLGEIVANQLFEL--EPQNAANYILLS 313
+ +G + V +Q+ + EP N LL+
Sbjct: 401 IAGYAANGRAKQAINVFDQMRNMGFEPNNITFVSLLT 437
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 70/280 (25%), Positives = 127/280 (45%), Gaps = 10/280 (3%)
Query: 28 VFDAMPEKNVVSFTTMIDGYAKAGDMAAARFLFEQATEKDVVAWSALISGYVQNGQPNQA 87
+ A P V++F + A +GD+ A +F + + + W+ +I GY +P A
Sbjct: 23 ITHAFPVSRVIAFCAL----AHSGDLHYAHTIFNRVEQPNTFMWNTMIRGYQNARKPIFA 78
Query: 88 LKVFLEMESKNVKPDEFILVSLMSATSQLGHLELAQWVDSYVSKSSIDLQQDHVIAALLD 147
F+ M V+ D V + A Q + + V V K D + V L+
Sbjct: 79 FSFFVYMFQLRVEMDSRSFVFALKACQQFETVFEGESVYCVVWKMGFDCEL-LVRNGLIH 137
Query: 148 MNAKCGNMDRALKLFKEMPKRDLVSYCSMIQGLSIHGCGEDAVRLFNSMLMEGLVPDEVA 207
A+ G + A ++F E +D+V++ +MI G + H C E+A+ +F ML+ + P+EV
Sbjct: 138 FYAERGLLKNARQVFDESSDKDVVTWTTMIDGYAAHDCSEEAMEVFELMLLSHVEPNEVT 197
Query: 208 FTIILTACSHSGLVDEGWNYFQSMKQKYGISPSPDHFACMVDLLSRSGHLGDAYELMKSM 267
+++ACS G ++ G + +++K H A ++D+ + L DA EL M
Sbjct: 198 LIAVVSACSDMGNLEMGKRVHEKVEEKNMRCSLSLHNA-LLDMYVKCDCLVDARELFDRM 256
Query: 268 HEPHAGAWGALLGACKLHGDSDLGEIVANQLFELEPQNAA 307
+W +++ GD + A + F+ P+ A
Sbjct: 257 ATKDVYSWTSMVNGYAKCGDLE----SARRFFDQTPRKNA 292
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 34/132 (25%), Positives = 64/132 (48%), Gaps = 12/132 (9%)
Query: 1 MPQRNVASWNAMLCGFVKDGDLSSARGVFDAMP----EKNVVSFTTMIDGYAKAGDMAAA 56
MP+RN+ SWN M+ G+ +G A VFD M E N ++F +++ + G ++
Sbjct: 389 MPERNLISWNTMIAGYAANGRAKQAINVFDQMRNMGFEPNNITFVSLLTACSHGGLISEG 448
Query: 57 RFLFEQATEKDVVA-----WSALISGYVQNGQPNQALKVFLEMESKNVKPDEFILVSLMS 111
R F+ K + ++ ++ + G +A K+ M ++P E +L++
Sbjct: 449 REYFDNMERKYGIKPERGHYACMVDLLGRTGLLEEAYKLIANMP---MQPCEAAWGALLN 505
Query: 112 ATSQLGHLELAQ 123
A G++ELA+
Sbjct: 506 ACRMHGNVELAR 517
>Medtr4g024860.1 | SLOW growth protein | HC | chr4:8430392-8426025 |
20130731
Length = 1026
Score = 301 bits (770), Expect = 8e-82, Method: Compositional matrix adjust.
Identities = 147/338 (43%), Positives = 230/338 (68%), Gaps = 6/338 (1%)
Query: 10 NAMLCGFVKDGDLSSARGVFDAMPEKNVVSFTTMIDGYAKAGDMAAARFLFEQATEKDVV 69
NA++ +VK G+L +AR +FD M +K +VS+TTM+ GYA+ G + AR + + EK VV
Sbjct: 298 NALMDMYVKCGELLTARVLFDNMAQKTLVSWTTMVLGYARFGFLDVAREILYKIPEKSVV 357
Query: 70 AWSALISGYVQNGQPNQALKVFLEMESKNVKPDEFILVSLMSATSQLGHLELAQWVDSYV 129
W+A+ISG VQ Q +AL +F EM+ + ++PD+ +V+ +SA SQLG L++ W+ Y+
Sbjct: 358 PWNAIISGCVQAKQGKEALALFHEMQIRTIEPDKVTMVNCLSACSQLGALDVGIWIHHYI 417
Query: 130 S--KSSIDLQQDHVIAALLDMNAKCGNMDRALKLFKEMPKRDLVSYCSMIQGLSIHGCGE 187
K SID+ AL+DM AKCGN+ RAL++F+E+P+R+ +++ ++I GL++HG +
Sbjct: 418 ERHKLSIDVALG---TALVDMYAKCGNIARALQVFEEIPQRNCLTWTAVICGLALHGNAQ 474
Query: 188 DAVRLFNSMLMEGLVPDEVAFTIILTACSHSGLVDEGWNYFQSMKQKYGISPSPDHFACM 247
DA+ F+ M+ G+VPDE+ F +L+AC H GLV+EG YF M K+ +SP H++CM
Sbjct: 475 DALSYFSKMIHIGIVPDEITFLGVLSACCHGGLVEEGRKYFSEMSSKFNVSPKLKHYSCM 534
Query: 248 VDLLSRSGHLGDAYELMKSM-HEPHAGAWGALLGACKLHGDSDLGEIVANQLFELEPQNA 306
VDLL R+GHL +A EL+K+M A GAL AC+++G+ +GE A +L E++PQ++
Sbjct: 535 VDLLGRAGHLEEAEELVKNMPMAADAAVLGALFFACRVYGNVQIGERTAFKLLEIDPQDS 594
Query: 307 ANYILLSNIYAAAERWIDVSLVRSRMRERSVQKIPGCS 344
NY+LL+++Y+ A+ W + R M ++ V+K PGCS
Sbjct: 595 GNYVLLASMYSEAKMWKEARSARKLMNDKGVEKTPGCS 632
Score = 119 bits (298), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 85/360 (23%), Positives = 166/360 (46%), Gaps = 75/360 (20%)
Query: 1 MPQRNVASWNAMLCGFVKDGDLSSARGVFDAM-------PEKN----------------- 36
+ + NV SWNA + G+V+ GD+ ++ M P+ +
Sbjct: 117 IKELNVFSWNAAIRGYVESGDIEGGFMLYKRMLLGGTLKPDNHTYPLLLKGCCGQYSSCL 176
Query: 37 -------VVSFTTMIDGYA---------KAGDMAAARFLFEQATEKDVVAWSALISGYVQ 80
V+ F D + G+++ A +F ++ +D+V W+++I+G V+
Sbjct: 177 GLGVLGHVLKFGFECDIFVHNASITMLLSCGELSVAYDVFNKSRVRDLVTWNSMITGCVK 236
Query: 81 NGQPNQALKVFLEMESKNVKPDEFILVSLMSATSQLGHLELAQWVDSYVSKSSIDLQQDH 140
G +A+K++ EME++ V+P+E ++ ++S+ SQ+ L L + Y+ + ++
Sbjct: 237 RGLAIEAIKIYKEMEAEKVRPNEITMIGMISSCSQVQDLNLGKEFHCYIKEHGLEFTIP- 295
Query: 141 VIAALLDMNAKCGNMDRALKLFKEMPKRDLVSYCSMIQGLS------------------- 181
+ AL+DM KCG + A LF M ++ LVS+ +M+ G +
Sbjct: 296 LTNALMDMYVKCGELLTARVLFDNMAQKTLVSWTTMVLGYARFGFLDVAREILYKIPEKS 355
Query: 182 -------IHGC-----GEDAVRLFNSMLMEGLVPDEVAFTIILTACSHSGLVDEG-WNYF 228
I GC G++A+ LF+ M + + PD+V L+ACS G +D G W +
Sbjct: 356 VVPWNAIISGCVQAKQGKEALALFHEMQIRTIEPDKVTMVNCLSACSQLGALDVGIWIHH 415
Query: 229 QSMKQKYGISPSPDHFACMVDLLSRSGHLGDAYELMKSMHEPHAGAWGALLGACKLHGDS 288
+ K I + +VD+ ++ G++ A ++ + + + + W A++ LHG++
Sbjct: 416 YIERHKLSIDVALG--TALVDMYAKCGNIARALQVFEEIPQRNCLTWTAVICGLALHGNA 473
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 62/277 (22%), Positives = 116/277 (41%), Gaps = 40/277 (14%)
Query: 15 GFVKDGDLSSARGVFDAMPEKNVVSFTTMIDGYAKAGDMAAARFLFEQATEKDVVAWSAL 74
G +++G +S F A+ E + + T R L+ + E +V +W+A
Sbjct: 84 GLIENGFAASRLVAFCALSESKELDYCT--------------RILY-RIKELNVFSWNAA 128
Query: 75 ISGYVQNGQPNQALKVFLEME-SKNVKPDEFILVSLMSAT----------SQLGH-LELA 122
I GYV++G ++ M +KPD L+ LGH L+
Sbjct: 129 IRGYVESGDIEGGFMLYKRMLLGGTLKPDNHTYPLLLKGCCGQYSSCLGLGVLGHVLKFG 188
Query: 123 QWVDSYVSKSSIDLQQDHVIAALLDMNAKCGNMDRALKLFKEMPKRDLVSYCSMIQGLSI 182
D +V +SI M CG + A +F + RDLV++ SMI G
Sbjct: 189 FECDIFVHNASIT------------MLLSCGELSVAYDVFNKSRVRDLVTWNSMITGCVK 236
Query: 183 HGCGEDAVRLFNSMLMEGLVPDEVAFTIILTACSHSGLVDEGWNYFQSMKQKYGISPSPD 242
G +A++++ M E + P+E+ ++++CS ++ G F +++G+ +
Sbjct: 237 RGLAIEAIKIYKEMEAEKVRPNEITMIGMISSCSQVQDLNLG-KEFHCYIKEHGLEFTIP 295
Query: 243 HFACMVDLLSRSGHLGDAYELMKSMHEPHAGAWGALL 279
++D+ + G L A L +M + +W ++
Sbjct: 296 LTNALMDMYVKCGELLTARVLFDNMAQKTLVSWTTMV 332
>Medtr7g011840.1 | PPR containing plant-like protein | HC |
chr7:3275571-3278623 | 20130731
Length = 605
Score = 299 bits (765), Expect = 3e-81, Method: Compositional matrix adjust.
Identities = 150/348 (43%), Positives = 223/348 (64%), Gaps = 3/348 (0%)
Query: 1 MPQRNVASWNAMLCGFVKDGDLSSARGVFDAMPEKNVVSFTTMIDGYAKAGDMAAARFLF 60
MP+R+ SWN ML GF K G++ A +F+ M E+++VS++TM+ GY+K GDM AR LF
Sbjct: 216 MPERDRVSWNTMLDGFTKAGEMDKAFKLFERMAERDIVSWSTMVCGYSKNGDMDMARMLF 275
Query: 61 EQATEKDVVAWSALISGYVQNGQPNQALKVFLEMESKNVKPDEFILVSLMSATSQLGHLE 120
++ K++V W+ +ISGY + GQ +A+ + EME ++ D+ +S+++A ++ G L
Sbjct: 276 DRCPVKNLVLWTTIISGYAEKGQVKEAMNLCDEMEKSGLRLDDGFFISILAACAESGMLG 335
Query: 121 LAQWVDSYVSKSSIDLQQDHVIAALLDMNAKCGNMDRALKLFKEM-PKRDLVSYCSMIQG 179
L + + +S V+ + +DM AKCG +D A ++F M ++DLVS+ SMI G
Sbjct: 336 LGKKMHDSFLRSRFRCSTK-VLNSFIDMYAKCGCVDDAFRVFNGMKTEKDLVSWNSMIHG 394
Query: 180 LSIHGCGEDAVRLFNSMLMEGLVPDEVAFTIILTACSHSGLVDEGWNYFQSMKQKYGISP 239
IHG GE ++ LFN+M+ EG PD F +L AC+H+GLV+EG YF SM++ YGI P
Sbjct: 395 FGIHGHGEKSIELFNTMVREGFKPDRYTFIGLLCACTHAGLVNEGRGYFYSMQRVYGIVP 454
Query: 240 SPDHFACMVDLLSRSGHLGDAYELMKSM-HEPHAGAWGALLGACKLHGDSDLGEIVANQL 298
+H+ CMVDLL R GHL +A+ L++SM EP+A G LLGAC++H D L V+ L
Sbjct: 455 QIEHYGCMVDLLGRGGHLKEAFWLVRSMPFEPNAIILGTLLGACRMHNDVKLATSVSKYL 514
Query: 299 FELEPQNAANYILLSNIYAAAERWIDVSLVRSRMRERSVQKIPGCSKL 346
F+L P + N+ LLSNIYA + WI+V+ VR +M + QK G S +
Sbjct: 515 FKLVPSDPGNFSLLSNIYAQSGDWINVAKVRKQMNDEGGQKPSGVSSI 562
Score = 65.5 bits (158), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 77/293 (26%), Positives = 124/293 (42%), Gaps = 63/293 (21%)
Query: 21 DLSSARGVFDAMPEKNVVSFTTMIDGYAKAGD------------------MAAARFLF-- 60
+LSSA VF+ +P+ NV + +I Y+ +G+ + A F +
Sbjct: 69 NLSSAVNVFNQVPDPNVHLYNYLIRAYSLSGNESNSLCAFGVLLKMHVDGVLADNFTYPF 128
Query: 61 ------------------EQATEK-----DVVAWSALISGYVQNGQPNQALKVFLEMESK 97
EK D+ ++LI Y + G A+KVF ME +
Sbjct: 129 LLKGCNGSSSWLSLVKMVHAHVEKLGFYWDIFVPNSLIDCYCRCGDVEMAMKVFSGMEER 188
Query: 98 NVKPDEFILVSLMSATSQLGHLELAQWVDSYVSKSSIDLQQDHV-IAALLDMNAKCGNMD 156
+V +S S +G L +D + ++D V +LD K G MD
Sbjct: 189 DV----------VSWNSMVGGLVKNGDLDGALKVFDEMPERDRVSWNTMLDGFTKAGEMD 238
Query: 157 RALKLFKEMPKRDLVSYCSMIQGLSIHGCGEDAVRLFNSMLMEGLVPDEVAFTIILTACS 216
+A KLF+ M +RD+VS+ +M+ G S +G + A LF+ ++ L V +T I++ +
Sbjct: 239 KAFKLFERMAERDIVSWSTMVCGYSKNGDMDMARMLFDRCPVKNL----VLWTTIISGYA 294
Query: 217 HSGLVDEGWNYFQSMKQKYGISPSPDHFACMVDLLSRSGHLGDAYELMKSMHE 269
G V E N M +K G+ F ++ + SG LG L K MH+
Sbjct: 295 EKGQVKEAMNLCDEM-EKSGLRLDDGFFISILAACAESGMLG----LGKKMHD 342
>Medtr8g106950.1 | pentatricopeptide (PPR) repeat protein | HC |
chr8:45164389-45168068 | 20130731
Length = 766
Score = 295 bits (756), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 141/345 (40%), Positives = 224/345 (64%), Gaps = 2/345 (0%)
Query: 1 MPQRNVASWNAMLCGFVKDGDLSSARGVFDAMPEKNVVSFTTMIDGYAKAGDMAAARFLF 60
MP++N S+NAM+ G+V+ + AR +F++MP +N+ S+ TMI GY + GD+A AR F
Sbjct: 292 MPEKNEVSYNAMIAGYVQTKKMDIARELFESMPCRNISSWNTMITGYGQIGDIAQARKFF 351
Query: 61 EQATEKDVVAWSALISGYVQNGQPNQALKVFLEMESKNVKPDEFILVSLMSATSQLGHLE 120
+ ++D V+W+A+I+GY Q+G +AL +F+E++ + +S + + LE
Sbjct: 352 DMMPQRDCVSWAAIIAGYAQSGHYEEALNMFVEIKQDGESLNRATFGCALSTCADIAALE 411
Query: 121 LAQWVDSYVSKSSIDLQQDHVIAALLDMNAKCGNMDRALKLFKEMPKRDLVSYCSMIQGL 180
L + + K V ALL M KCG++D A F+ + ++D+VS+ +M+ G
Sbjct: 412 LGKQIHGQAVKMGYGTGC-FVGNALLAMYFKCGSIDEANDTFEGIEEKDVVSWNTMLAGY 470
Query: 181 SIHGCGEDAVRLFNSMLMEGLVPDEVAFTIILTACSHSGLVDEGWNYFQSMKQKYGISPS 240
+ HG G A+ +F SM G+ PDE+ +L+ACSH+GL+D G YF SM + YG+ P+
Sbjct: 471 ARHGFGRQALTVFESMKTAGVKPDEITMVGVLSACSHTGLLDRGTEYFYSMTKDYGVIPT 530
Query: 241 PDHFACMVDLLSRSGHLGDAYELMKSM-HEPHAGAWGALLGACKLHGDSDLGEIVANQLF 299
H+ CM+DLL R+G L +A +L+++M +P A +WGALLGA ++HG+++LGE A +F
Sbjct: 531 SKHYTCMIDLLGRAGRLEEAQDLIRNMPFQPGAASWGALLGASRIHGNTELGEKAAEMVF 590
Query: 300 ELEPQNAANYILLSNIYAAAERWIDVSLVRSRMRERSVQKIPGCS 344
++EPQN+ Y+LLSN+YAA+ RW+D +RS+MR+ VQK+PG S
Sbjct: 591 KMEPQNSGMYVLLSNLYAASGRWVDADKMRSKMRDIGVQKVPGYS 635
Score = 136 bits (343), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 94/305 (30%), Positives = 158/305 (51%), Gaps = 24/305 (7%)
Query: 1 MPQRNVASWNAMLCGFVKDGDLSSARGVFDAMPEKNVVSFTTMIDGYAKAGDMAAARFLF 60
MP+R+ S+NAM+ G++++ + AR +FD MPE+++ S+ M+ GY + + AR LF
Sbjct: 75 MPRRSSVSYNAMISGYLRNSKFNLARNLFDQMPERDLFSWNVMLTGYVRNCRLGDARRLF 134
Query: 61 EQATEKDVVAWSALISGYVQNGQPNQALKVFLEMESKNVKPDEFILVSLMSATSQLGHLE 120
+ EKDVV+W++L+SGY QNG ++A +VF M KN L++A G +E
Sbjct: 135 DLMPEKDVVSWNSLLSGYAQNGYVDEAREVFDNMPEKN----SISWNGLLAAYVHNGRIE 190
Query: 121 LAQWVDSYVSKSSIDLQQDHVIAALLDMNAKCGNMDRALKLFKEMPKRDLVSYCSMIQGL 180
A + + SKS DL + + K G+ A LF +MP RD +S+ +MI G
Sbjct: 191 EACLL--FESKSDWDLISWNCLMGGFVRKKKLGD---ARWLFDKMPVRDAISWNTMISGY 245
Query: 181 SIHGCGEDAVRLFNSMLMEGLVPDEVAFTIILTACSHSGLVDEGWNYFQSMKQKYGISPS 240
+ G A RLF+ E D +T +++ +G++DE +F M +K +S
Sbjct: 246 AQGGGLSQARRLFD----ESPTRDVFTWTAMVSGYVQNGMLDEAKTFFDEMPEKNEVS-- 299
Query: 241 PDHFACMVDLLSRSGHLGDAYELMKSMHEPHAGAWGALLGACKLHGDSDLGEIV-ANQLF 299
+ M+ ++ + A EL +SM + +W ++ G +G+I A + F
Sbjct: 300 ---YNAMIAGYVQTKKMDIARELFESMPCRNISSWNTMIT-----GYGQIGDIAQARKFF 351
Query: 300 ELEPQ 304
++ PQ
Sbjct: 352 DMMPQ 356
Score = 129 bits (325), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 78/283 (27%), Positives = 146/283 (51%), Gaps = 12/283 (4%)
Query: 5 NVASWNAMLCGFVKDGDLSSARGVFDAMPEKNVVSFTTMIDGYAKAGDMAAARFLFEQAT 64
++ SWN ++ GFV+ L AR +FD MP ++ +S+ TMI GYA+ G ++ AR LF+++
Sbjct: 203 DLISWNCLMGGFVRKKKLGDARWLFDKMPVRDAISWNTMISGYAQGGGLSQARRLFDESP 262
Query: 65 EKDVVAWSALISGYVQNGQPNQALKVFLEMESKNVKPDEFILVSLMSATSQLGHLELAQW 124
+DV W+A++SGYVQNG ++A F EM KN E ++++ Q +++A+
Sbjct: 263 TRDVFTWTAMVSGYVQNGMLDEAKTFFDEMPEKN----EVSYNAMIAGYVQTKKMDIARE 318
Query: 125 VDSYVSKSSIDLQQDHVIAALLDMNAKCGNMDRALKLFKEMPKRDLVSYCSMIQGLSIHG 184
+ + +I + + G++ +A K F MP+RD VS+ ++I G + G
Sbjct: 319 LFESMPCRNISSWNTMITGY-----GQIGDIAQARKFFDMMPQRDCVSWAAIIAGYAQSG 373
Query: 185 CGEDAVRLFNSMLMEGLVPDEVAFTIILTACSHSGLVDEGWN-YFQSMKQKYGISPSPDH 243
E+A+ +F + +G + F L+ C+ ++ G + Q++K YG +
Sbjct: 374 HYEEALNMFVEIKQDGESLNRATFGCALSTCADIAALELGKQIHGQAVKMGYGTGCFVGN 433
Query: 244 FACMVDLLSRSGHLGDAYELMKSMHEPHAGAWGALLGACKLHG 286
++ + + G + +A + + + E +W +L HG
Sbjct: 434 --ALLAMYFKCGSIDEANDTFEGIEEKDVVSWNTMLAGYARHG 474
Score = 58.9 bits (141), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 60/243 (24%), Positives = 111/243 (45%), Gaps = 24/243 (9%)
Query: 62 QATEKDVVAWSALISGYVQNGQPNQALKVFLEMESK-NVKPDEFILVSLMSATSQLGHLE 120
+ + D++ W+ IS +++NG + AL VF M + +V + I L ++ L
Sbjct: 43 RVKDPDILKWNKAISTHMRNGHCDSALHVFNTMPRRSSVSYNAMISGYLRNSKFNLARNL 102
Query: 121 LAQWVDSYVSKSSIDLQQDHVIAALLDMNAKCGNMDRALKLFKEMPKRDLVSYCSMIQGL 180
Q + DL +V+ N + G+ A +LF MP++D+VS+ S++ G
Sbjct: 103 FDQMPER-------DLFSWNVMLTGYVRNCRLGD---ARRLFDLMPEKDVVSWNSLLSGY 152
Query: 181 SIHGCGEDAVRLFNSMLMEGLVPDEVAFTIILTACSHSGLVDEGWNYFQSMKQKYGISPS 240
+ +G ++A +F++M + + +++ +L A H+G ++E F+S IS
Sbjct: 153 AQNGYVDEAREVFDNMPEK----NSISWNGLLAAYVHNGRIEEACLLFESKSDWDLIS-- 206
Query: 241 PDHFACMVDLLSRSGHLGDAYELMKSMHEPHAGAWGALLGACKLHGDSDLGEIVANQLFE 300
+ C++ R LGDA L M A +W ++ G G A +LF+
Sbjct: 207 ---WNCLMGGFVRKKKLGDARWLFDKMPVRDAISWNTMISGYAQGG----GLSQARRLFD 259
Query: 301 LEP 303
P
Sbjct: 260 ESP 262
>Medtr2g018870.1 | PPR containing plant-like protein | HC |
chr2:6013889-6015841 | 20130731
Length = 613
Score = 295 bits (755), Expect = 4e-80, Method: Compositional matrix adjust.
Identities = 154/380 (40%), Positives = 230/380 (60%), Gaps = 41/380 (10%)
Query: 5 NVASWNAMLCGFVKDGDLSSARGVFDAM------PEKNVVSF------------------ 40
NV +WN M+ G+ + + + A G++ M P+ + F
Sbjct: 104 NVFTWNTMIRGYAESDNSTPALGLYRKMLGSCVEPDTHTYPFLLKAISKSLNVRDGEMIH 163
Query: 41 ---------------TTMIDGYAKAGDMAAARFLFEQATEKDVVAWSALISGYVQNGQPN 85
+++ YA GD +A +FE E+D+VAW+++I+G+ NG+PN
Sbjct: 164 SVTVRNGFESLIFVRNSLLHIYAACGDTESAYKVFELMGERDLVAWNSVINGFALNGKPN 223
Query: 86 QALKVFLEMESKNVKPDEFILVSLMSATSQLGHLELAQWVDSYVSKSSIDLQQDHVIAAL 145
+AL +F EM K V+PD F +VSL SA ++LG LEL + V Y+ K + HV +L
Sbjct: 224 EALSLFREMSLKGVEPDGFTVVSLFSACAELGALELGRRVHVYLLKVGLT-GNLHVNNSL 282
Query: 146 LDMNAKCGNMDRALKLFKEMPKRDLVSYCSMIQGLSIHGCGEDAVRLFNSMLMEGLVPDE 205
LD AKCG++ A ++F EM +R++VS+ S++ GL+++G GE+A+ LF M + +VP E
Sbjct: 283 LDFYAKCGSIREAQQVFSEMSERNVVSWTSLVVGLAVNGFGEEALGLFKEMERQKIVPRE 342
Query: 206 VAFTIILTACSHSGLVDEGWNYFQSMKQKYGISPSPDHFACMVDLLSRSGHLGDAYELMK 265
+ F +L ACSH G++DEG+NYF+ MK++YGI P +H+ CMVDLLSR+G + AYE ++
Sbjct: 343 ITFVGVLYACSHCGMLDEGFNYFRRMKEEYGIRPRIEHYGCMVDLLSRAGLVKRAYEYIQ 402
Query: 266 SM-HEPHAGAWGALLGACKLHGDSDLGEIVANQLFELEPQNAANYILLSNIYAAAERWID 324
SM +P+A W LLGAC +HGD LGEI + L +LEP+++ +Y+LLSN+YA+ RW D
Sbjct: 403 SMPMQPNAVIWRTLLGACTVHGDLSLGEIARSHLLKLEPKHSGDYVLLSNLYASERRWSD 462
Query: 325 VSLVRSRMRERSVQKIPGCS 344
V VR M E V K PG S
Sbjct: 463 VQTVRRSMIEDGVWKTPGYS 482
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 62/255 (24%), Positives = 125/255 (49%), Gaps = 5/255 (1%)
Query: 50 AGDMAAARFLFEQATEKDVVAWSALISGYVQNGQPNQALKVFLEMESKNVKPDEFILVSL 109
+ M+ A +F +V W+ +I GY ++ AL ++ +M V+PD L
Sbjct: 87 SAPMSYAHNVFTLLYNPNVFTWNTMIRGYAESDNSTPALGLYRKMLGSCVEPDTHTYPFL 146
Query: 110 MSATSQLGHLELAQWVDSYVSKSSIDLQQDHVIAALLDMNAKCGNMDRALKLFKEMPKRD 169
+ A S+ ++ + + S ++ + V +LL + A CG+ + A K+F+ M +RD
Sbjct: 147 LKAISKSLNVRDGEMIHSVTVRNGFE-SLIFVRNSLLHIYAACGDTESAYKVFELMGERD 205
Query: 170 LVSYCSMIQGLSIHGCGEDAVRLFNSMLMEGLVPDEVAFTIILTACSHSGLVDEGWNYFQ 229
LV++ S+I G +++G +A+ LF M ++G+ PD + +AC+ G ++ G
Sbjct: 206 LVAWNSVINGFALNGKPNEALSLFREMSLKGVEPDGFTVVSLFSACAELGALELGRRVHV 265
Query: 230 SMKQKYGISPSPDHFACMVDLLSRSGHLGDAYELMKSMHEPHAGAWGALLGACKLHGDSD 289
+ K G++ + ++D ++ G + +A ++ M E + +W +L+ ++G
Sbjct: 266 YL-LKVGLTGNLHVNNSLLDFYAKCGSIREAQQVFSEMSERNVVSWTSLVVGLAVNG--- 321
Query: 290 LGEIVANQLFELEPQ 304
GE E+E Q
Sbjct: 322 FGEEALGLFKEMERQ 336
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 54/225 (24%), Positives = 104/225 (46%), Gaps = 42/225 (18%)
Query: 1 MPQRNVASWNAMLCGFVKDGDLSSARGVFDAMPEKNV----------------------- 37
M +R++ +WN+++ GF +G + A +F M K V
Sbjct: 201 MGERDLVAWNSVINGFALNGKPNEALSLFREMSLKGVEPDGFTVVSLFSACAELGALELG 260
Query: 38 ---------VSFT-------TMIDGYAKAGDMAAARFLFEQATEKDVVAWSALISGYVQN 81
V T +++D YAK G + A+ +F + +E++VV+W++L+ G N
Sbjct: 261 RRVHVYLLKVGLTGNLHVNNSLLDFYAKCGSIREAQQVFSEMSERNVVSWTSLVVGLAVN 320
Query: 82 GQPNQALKVFLEMESKNVKPDEFILVSLMSATSQLGHL-ELAQWVDSYVSKSSIDLQQDH 140
G +AL +F EME + + P E V ++ A S G L E + + I + +H
Sbjct: 321 GFGEEALGLFKEMERQKIVPREITFVGVLYACSHCGMLDEGFNYFRRMKEEYGIRPRIEH 380
Query: 141 VIAALLDMNAKCGNMDRALKLFKEMP-KRDLVSYCSMIQGLSIHG 184
++D+ ++ G + RA + + MP + + V + +++ ++HG
Sbjct: 381 Y-GCMVDLLSRAGLVKRAYEYIQSMPMQPNAVIWRTLLGACTVHG 424
>Medtr4g095065.1 | pentatricopeptide (PPR) repeat protein | HC |
chr4:39629093-39627012 | 20130731
Length = 626
Score = 290 bits (742), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 147/334 (44%), Positives = 214/334 (64%), Gaps = 4/334 (1%)
Query: 15 GFVKDGDLSSARGVFDAMPEKNVVSFTTMIDGYAKAGDMAAARFLFE-QATEKDVVAWSA 73
G+ + GD SA +FD MPEK+++SFTTM+ YAK G + AR LF+ +DVV W+
Sbjct: 162 GYARGGDFISAEKLFDKMPEKSLISFTTMLMCYAKHGKLLEARLLFDGMEGNRDVVVWNV 221
Query: 74 LISGYVQNGQPNQALKVFLEMESKNVKPDEFILVSLMSATSQLGHLELAQWVDSYVS--K 131
+I GY QNG PN+ L +F M + VKP+ L+ ++S+ Q+G LE +WV SY+ K
Sbjct: 222 MIDGYAQNGFPNECLLLFRRMLVEKVKPNVITLLPVLSSCGQVGALESGRWVHSYIKNGK 281
Query: 132 SSIDLQQDHVIAALLDMNAKCGNMDRALKLFKEMPKRDLVSYCSMIQGLSIHGCGEDAVR 191
+ + V AL+DM KCG+++ A K+F ++ +D+V++ SMI G +++G E+A++
Sbjct: 282 DGVVGVEVRVGTALVDMYCKCGSLEDARKVFDKIDGKDVVAWNSMIMGYAVNGLSEEALK 341
Query: 192 LFNSMLMEGLVPDEVAFTIILTACSHSGLVDEGWNYFQSMKQKYGISPSPDHFACMVDLL 251
LF+ M EG+ P V F +LTAC HSGLV +GW F MK +Y + P +HF CMV+LL
Sbjct: 342 LFHEMHGEGVRPSYVTFIALLTACGHSGLVTKGWEMFNLMKNEYKMEPRVEHFGCMVNLL 401
Query: 252 SRSGHLGDAYELMKSMH-EPHAGAWGALLGACKLHGDSDLGEIVANQLFELEPQNAANYI 310
R+G L +AY+L++SM +P WG LL AC+LH + LGE +A L + ++ Y+
Sbjct: 402 GRAGRLQEAYDLVRSMKIDPDPVIWGTLLWACRLHNNISLGEEIAEFLLSNDLASSGTYV 461
Query: 311 LLSNIYAAAERWIDVSLVRSRMRERSVQKIPGCS 344
LLSNIYAAA W + VRS M++ V+K PGCS
Sbjct: 462 LLSNIYAAAGNWDGAAKVRSLMKDSGVEKEPGCS 495
Score = 79.0 bits (193), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 60/278 (21%), Positives = 125/278 (44%), Gaps = 41/278 (14%)
Query: 47 YAKAGDMAAARFLFEQATEKDVVAWSALISGYVQNGQPNQALKVFLEMESKNVKPDEFIL 106
Y+ G + + LF + +DV W+++I + Q+ +QAL + +M + ++P+ F
Sbjct: 66 YSSLGHLNYSVTLFNRTRNRDVYTWTSIIHAHTQSKLNDQALSYYAQMLTHRIQPNAFTF 125
Query: 107 VSLMSATSQLGHLELAQWVDSYVSKSSIDLQQDHVIAALLDMNAKCGNMDRALKLFKEMP 166
SL++ ++ ++ + + +V K + +V L+D A+ G+ A KLF +MP
Sbjct: 126 SSLLNGST----IQPIKSIHCHVIKFGL-CSDTYVATGLVDGYARGGDFISAEKLFDKMP 180
Query: 167 KRDLVSYCS--------------------------------MIQGLSIHGCGEDAVRLFN 194
++ L+S+ + MI G + +G + + LF
Sbjct: 181 EKSLISFTTMLMCYAKHGKLLEARLLFDGMEGNRDVVVWNVMIDGYAQNGFPNECLLLFR 240
Query: 195 SMLMEGLVPDEVAFTIILTACSHSGLVDEG-W--NYFQSMKQKYGISPSPDHFACMVDLL 251
ML+E + P+ + +L++C G ++ G W +Y ++ K A +VD+
Sbjct: 241 RMLVEKVKPNVITLLPVLSSCGQVGALESGRWVHSYIKNGKDGVVGVEVRVGTA-LVDMY 299
Query: 252 SRSGHLGDAYELMKSMHEPHAGAWGALLGACKLHGDSD 289
+ G L DA ++ + AW +++ ++G S+
Sbjct: 300 CKCGSLEDARKVFDKIDGKDVVAWNSMIMGYAVNGLSE 337
>Medtr7g076707.1 | PPR containing plant-like protein | HC |
chr7:28928185-28925455 | 20130731
Length = 569
Score = 287 bits (735), Expect = 9e-78, Method: Compositional matrix adjust.
Identities = 144/324 (44%), Positives = 212/324 (65%), Gaps = 4/324 (1%)
Query: 25 ARGVFDAMPEKNVVSFTTMIDGYAKAGDMAAARFLFEQATEKDVVAWSALISGYVQNGQP 84
AR VFD M ++N+VS+ MI GY KAG++ AAR LF+ +DV++W+++IS Y Q GQ
Sbjct: 231 ARRVFDRMRDRNMVSWNAMIMGYGKAGNLVAARKLFDDMPHRDVISWTSMISSYSQAGQF 290
Query: 85 NQALKVFLEMESKNVKPDEFILVSLMSATSQLGHLELAQWVDSYVSKSSIDLQQD-HVIA 143
+A+++F EM VKPDE + S++SA + +G L++ + V Y+ K D+ D +V
Sbjct: 291 GKAVRLFQEMMVTKVKPDEITVASVLSACAHIGALDVGEAVHEYIRK--YDVNADIYVGN 348
Query: 144 ALLDMNAKCGNMDRALKLFKEMPKRDLVSYCSMIQGLSIHGCGEDAVRLFNSMLMEGLVP 203
AL+DM KCG +++ L +F+EM KRD VS+ S+I GL+++G + A+ LF+ ML EG+ P
Sbjct: 349 ALIDMYCKCGAVEKGLSVFEEMGKRDSVSWTSVIAGLAVNGSADSALNLFSLMLREGVRP 408
Query: 204 DEVAFTIILTACSHSGLVDEGWNYFQSMKQKYGISPSPDHFACMVDLLSRSGHLGDAYEL 263
F +L AC+H+G+VD+G YF+SM++ YG++P H+ C+VDLLSRSG+LG AYE
Sbjct: 409 THGTFVGVLLACAHAGVVDKGLEYFESMERVYGLTPEMKHYGCVVDLLSRSGNLGRAYEF 468
Query: 264 MKSM-HEPHAGAWGALLGACKLHGDSDLGEIVANQLFELEPQNAANYILLSNIYAAAERW 322
+K M +P W LL A ++HG+ L EI +L E +P N+ NYIL SN YA + RW
Sbjct: 469 IKRMPMDPDVVVWRILLSASQVHGNLHLAEIATKKLLETDPSNSGNYILSSNTYAGSNRW 528
Query: 323 IDVSLVRSRMRERSVQKIPGCSKL 346
DV +R M E +V K S +
Sbjct: 529 EDVIKMRRLMEESNVHKPSASSSV 552
Score = 102 bits (254), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 73/287 (25%), Positives = 139/287 (48%), Gaps = 16/287 (5%)
Query: 10 NAMLCGFVKDGDLSSARGVFDAMPEKNVVSFTTMIDGYAKAGDMAAARFLFEQATEKDV- 68
NA++ G+ +L AR VFD M E+++VS+ ++I GY + + +FE+ DV
Sbjct: 115 NALIHGYAGFCELGFARKVFDEMSERDLVSWNSLICGYGRCRRYSEVLVVFEEMRMADVK 174
Query: 69 ---VAWSALISGYVQNGQPNQALKVFLEMESKNVKPDEFILVSLMSATSQLGHLELAQWV 125
V ++ G+ + +E V+ D ++ +L+ + ++LA+ V
Sbjct: 175 GDAVTMVKVVLACTVLGEWGVVDAMIEYIEENKVEVDVYLGNTLIDMYGRRSMVDLARRV 234
Query: 126 DSYVSKSSIDLQQDHVIA---ALLDMNAKCGNMDRALKLFKEMPKRDLVSYCSMIQGLSI 182
D +D + A++ K GN+ A KLF +MP RD++S+ SMI S
Sbjct: 235 --------FDRMRDRNMVSWNAMIMGYGKAGNLVAARKLFDDMPHRDVISWTSMISSYSQ 286
Query: 183 HGCGEDAVRLFNSMLMEGLVPDEVAFTIILTACSHSGLVDEGWNYFQSMKQKYGISPSPD 242
G AVRLF M++ + PDE+ +L+AC+H G +D G + ++ KY ++
Sbjct: 287 AGQFGKAVRLFQEMMVTKVKPDEITVASVLSACAHIGALDVGEAVHEYIR-KYDVNADIY 345
Query: 243 HFACMVDLLSRSGHLGDAYELMKSMHEPHAGAWGALLGACKLHGDSD 289
++D+ + G + + + M + + +W +++ ++G +D
Sbjct: 346 VGNALIDMYCKCGAVEKGLSVFEEMGKRDSVSWTSVIAGLAVNGSAD 392
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 64/272 (23%), Positives = 117/272 (43%), Gaps = 16/272 (5%)
Query: 38 VSFTTMIDGYA-KAGDMAAARFLFEQATEKDVVAWSALISGYVQNGQPNQALKVFLEMES 96
+S ++ YA ++ A LF Q + W+ +I G+ Q QP +A++ + M S
Sbjct: 11 ISIFNLLKSYALSPTNILKANELFRQIPRPTLSHWNIMIRGWSQTNQPIEAIRNYNLMYS 70
Query: 97 KNVKPDEFILVSLMSATSQLGHLELAQWVDSYVSKSSIDLQQDHVIAALLDMNAKCGNMD 156
+ + + L+ A +++ ++ V + V K D V AL+ A +
Sbjct: 71 QALFGNNLTYPFLLKACARISNVSCTT-VHARVLKLGFD-SDLFVSNALIHGYAGFCELG 128
Query: 157 RALKLFKEMPKRDLVSYCSMIQGLSIHGCGEDAVRLFNSMLMEGLVPDEVAFTIILTACS 216
A K+F EM +RDLVS+ S+I G + + +F M M + D V ++ AC+
Sbjct: 129 FARKVFDEMSERDLVSWNSLICGYGRCRRYSEVLVVFEEMRMADVKGDAVTMVKVVLACT 188
Query: 217 ---HSGLVDEGWNYFQSMKQKYGISPSPDHFACMVDLLSRSGHLGDAYELMKSMHEPHAG 273
G+VD Y + K + + ++D+ R + A + M + +
Sbjct: 189 VLGEWGVVDAMIEYIEENKVEVDVYLG----NTLIDMYGRRSMVDLARRVFDRMRDRNMV 244
Query: 274 AWGALLGACKLHGDSDLGEIV-ANQLFELEPQ 304
+W A+ + G G +V A +LF+ P
Sbjct: 245 SWNAM-----IMGYGKAGNLVAARKLFDDMPH 271
>Medtr4g099480.1 | pentatricopeptide (PPR) repeat protein | HC |
chr4:41303481-41301142 | 20130731
Length = 634
Score = 287 bits (735), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 139/345 (40%), Positives = 214/345 (62%), Gaps = 2/345 (0%)
Query: 1 MPQRNVASWNAMLCGFVKDGDLSSARGVFDAMPEKNVVSFTTMIDGYAKAGDMAAARFLF 60
MP++N +W+AM+ G+V GDL +A F A P K+V+++T MI GY K G + A LF
Sbjct: 160 MPEKNCVTWSAMVSGYVACGDLDAAVECFYAAPMKSVITWTAMITGYMKFGRVGLAEMLF 219
Query: 61 EQATEKDVVAWSALISGYVQNGQPNQALKVFLEMESKNVKPDEFILVSLMSATSQLGHLE 120
+ + K +V W+A+I+GYV NG+ LK+F M VKP+ L S++ S L L+
Sbjct: 220 WKLSLKTLVTWNAMIAGYVDNGRAENGLKLFKTMLETGVKPNALSLTSVLLGCSDLSALQ 279
Query: 121 LAQWVDSYVSKSSIDLQQDHVIAALLDMNAKCGNMDRALKLFKEMPKRDLVSYCSMIQGL 180
+ V V KS + + + +L+ M +KCG++ + LF ++P++D+V++ +MI G
Sbjct: 280 TGKQVHQLVCKSPLS-RDTTAVTSLISMYSKCGDLKDSWDLFVQIPRKDVVTWNAMISGY 338
Query: 181 SIHGCGEDAVRLFNSMLMEGLVPDEVAFTIILTACSHSGLVDEGWNYFQSMKQKYGISPS 240
+ HG GE A+ LF+ M + PD + F +L AC+H+G+VD G YF SM +++GI
Sbjct: 339 AQHGAGEKALHLFDEMKKSEIKPDWITFVAVLLACNHAGMVDLGTKYFNSMVKEFGIKTR 398
Query: 241 PDHFACMVDLLSRSGHLGDAYELMKSM-HEPHAGAWGALLGACKLHGDSDLGEIVANQLF 299
P+H+ CMVDLL R+G L +A +++KSM +PH +G LLGAC++H + E A L
Sbjct: 399 PEHYGCMVDLLGRAGRLSEAVDMVKSMPFKPHPAIFGTLLGACRIHKSMHMAEFAAKNLL 458
Query: 300 ELEPQNAANYILLSNIYAAAERWIDVSLVRSRMRERSVQKIPGCS 344
EL+P +A Y+ L+N+YAA +W V+ VR M+E +V K PG S
Sbjct: 459 ELDPTSATGYVQLANVYAAQSKWEHVARVRKSMKENNVVKPPGYS 503
Score = 104 bits (260), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 72/286 (25%), Positives = 127/286 (44%), Gaps = 41/286 (14%)
Query: 1 MPQRNVASWNAMLCGFVKDGDLSSARGVFDAMPEKNVVSFTTMIDGYAKAGDMAAARFLF 60
+P+ N S+N ML ++ + +AR FD MP ++ S+ TM+ GYA+ M AR L
Sbjct: 98 IPEPNTVSYNTMLACYLHHFGIHNARDFFDWMPVRDTASWNTMLSGYAQVRMMDEARRLL 157
Query: 61 EQATEKDVVAWSALISGYVQNGQPNQALKVFLEMESKNVKPDEFILVSLMSATSQLGHLE 120
EK+ V WSA++SGYV G + A++ F K+V ++++ + G +
Sbjct: 158 VAMPEKNCVTWSAMVSGYVACGDLDAAVECFYAAPMKSV----ITWTAMITGYMKFGRVG 213
Query: 121 LAQWVDSYVSKSSIDLQQDHVIAALLDMNAKCGNMDRALKLFKEMPKRDLVSYCSMIQGL 180
LA+ LF ++ + LV++ +MI G
Sbjct: 214 LAE------------------------------------MLFWKLSLKTLVTWNAMIAGY 237
Query: 181 SIHGCGEDAVRLFNSMLMEGLVPDEVAFTIILTACSHSGLVDEGWNYFQSMKQKYGISPS 240
+G E+ ++LF +ML G+ P+ ++ T +L CS + G Q + K +S
Sbjct: 238 VDNGRAENGLKLFKTMLETGVKPNALSLTSVLLGCSDLSALQTGKQVHQ-LVCKSPLSRD 296
Query: 241 PDHFACMVDLLSRSGHLGDAYELMKSMHEPHAGAWGALLGACKLHG 286
++ + S+ G L D+++L + W A++ HG
Sbjct: 297 TTAVTSLISMYSKCGDLKDSWDLFVQIPRKDVVTWNAMISGYAQHG 342
>Medtr8g106910.1 | pentatricopeptide (PPR) repeat protein | HC |
chr8:45147837-45154874 | 20130731
Length = 787
Score = 286 bits (732), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 139/345 (40%), Positives = 215/345 (62%), Gaps = 2/345 (0%)
Query: 1 MPQRNVASWNAMLCGFVKDGDLSSARGVFDAMPEKNVVSFTTMIDGYAKAGDMAAARFLF 60
MP + ++N M+ G+V+ + AR +F+AMP +NV S+ T+I GY + GD+A AR LF
Sbjct: 260 MPGKREMAYNVMIAGYVQYKKMDMARELFEAMPCRNVGSWNTIISGYGQNGDIAQARELF 319
Query: 61 EQATEKDVVAWSALISGYVQNGQPNQALKVFLEMESKNVKPDEFILVSLMSATSQLGHLE 120
+ T++D V+W+A+I+GY Q G + + + ++M+ + +S + + L
Sbjct: 320 DMMTQRDCVSWAAIIAGYAQTGHYEKVMHMLVKMKRDGKSLNRSTFCCALSTCAGMAALV 379
Query: 121 LAQWVDSYVSKSSIDLQQDHVIAALLDMNAKCGNMDRALKLFKEMPKRDLVSYCSMIQGL 180
L + V K+ D V ALL+M KCG++ A +F+ M +D++S+ +M+ G
Sbjct: 380 LGKQVHGQAVKTGYD-NGCLVGNALLEMYCKCGSIGEAYDVFERMQLKDIISWNTMLAGY 438
Query: 181 SIHGCGEDAVRLFNSMLMEGLVPDEVAFTIILTACSHSGLVDEGWNYFQSMKQKYGISPS 240
+ HG G A+ +F+SM G PDE+ +L ACSH+GL D G YF SM + YGI+P+
Sbjct: 439 ARHGFGRQALLVFDSMKTAGFKPDEITMVGVLLACSHTGLTDRGTEYFYSMSKDYGITPN 498
Query: 241 PDHFACMVDLLSRSGHLGDAYELMKSM-HEPHAGAWGALLGACKLHGDSDLGEIVANQLF 299
H+ CM+DLL R+G L +A+ LM++M EP A WGALLGA ++HG+++LGE A +F
Sbjct: 499 SKHYNCMIDLLGRAGLLEEAHNLMRNMPFEPDAATWGALLGASRIHGNAELGEKAAEMVF 558
Query: 300 ELEPQNAANYILLSNIYAAAERWIDVSLVRSRMRERSVQKIPGCS 344
+EP NA Y+LLSN+YA +W+DV +R +MR+ +QKIPG S
Sbjct: 559 NMEPNNAGMYVLLSNLYATLGKWVDVGKLRLKMRQLGIQKIPGYS 603
Score = 119 bits (298), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 82/285 (28%), Positives = 146/285 (51%), Gaps = 22/285 (7%)
Query: 8 SWNAMLCGFVKDGDLSSARGVFDAMPEKNVVSFTTMIDGYAKAGDMAAARFLFEQATEKD 67
SWN ++ G+VK L AR +FD MP +N +S+ TMI GYA+ GD+ AR LFE++ +D
Sbjct: 174 SWNCLMGGYVKRKMLGDARRLFDHMPVRNAISWNTMISGYARDGDLLQARRLFEESPVRD 233
Query: 68 VVAWSALISGYVQNGQPNQALKVFLEMESKNVKPDEFILVSLMSATSQLGHLELAQWVDS 127
V W+A++ YVQ+G ++A +VF EM K E +++ Q +++A+ +
Sbjct: 234 VFTWTAMVFAYVQSGMLDEARRVFDEMPGKR----EMAYNVMIAGYVQYKKMDMAR--EL 287
Query: 128 YVSKSSIDLQQDHVIAALLDMNAKCGNMDRALKLFKEMPKRDLVSYCSMIQGLSIHGCGE 187
+ + ++ + I + N G++ +A +LF M +RD VS+ ++I G + G E
Sbjct: 288 FEAMPCRNVGSWNTIISGYGQN---GDIAQARELFDMMTQRDCVSWAAIIAGYAQTGHYE 344
Query: 188 DAVRLFNSMLMEGLVPDEVAFTIILTACS-HSGLVDEGWNYFQSMKQKYGISPSPDHFAC 246
+ + M +G + F L+ C+ + LV + Q++K Y D+ C
Sbjct: 345 KVMHMLVKMKRDGKSLNRSTFCCALSTCAGMAALVLGKQVHGQAVKTGY------DN-GC 397
Query: 247 MV-----DLLSRSGHLGDAYELMKSMHEPHAGAWGALLGACKLHG 286
+V ++ + G +G+AY++ + M +W +L HG
Sbjct: 398 LVGNALLEMYCKCGSIGEAYDVFERMQLKDIISWNTMLAGYARHG 442
Score = 112 bits (279), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 86/304 (28%), Positives = 142/304 (46%), Gaps = 53/304 (17%)
Query: 1 MPQRNVASWNAMLCGFVKDGDLSSARGVFDAMPEKNVVSFTTMIDGYAKAGDMAAARFLF 60
MP +N+ SWN ML G+VK+ L AR +FD MP+K+ VS+ M+ GY ++G + A+ +F
Sbjct: 74 MPYKNLFSWNLMLTGYVKNRRLVDARNLFDLMPQKDAVSWNVMLSGYVRSGCVDEAKLVF 133
Query: 61 EQATEKDVVAWSALISGYVQNGQPNQALKVFLEMESKNVKPDEFILVSLMSATSQLGHLE 120
+ KD ++W+ L++ YVQNG+ +A ++F ESK + L+S +G
Sbjct: 134 DNMPYKDSISWNGLLAVYVQNGRLEEARRLF---ESK-------VDWELISWNCLMG--- 180
Query: 121 LAQWVDSYVSKSSIDLQQDHVIAALLDMNAKCGNMDRALKLFKEMPKRDLVSYCSMIQGL 180
YV + + A +LF MP R+ +S+ +MI G
Sbjct: 181 ------GYVKRKM---------------------LGDARRLFDHMPVRNAISWNTMISGY 213
Query: 181 SIHGCGEDAVRLFNSMLMEGLVPDEVAFTIILTACSHSGLVDEGWNYFQSMKQKYGISPS 240
+ G A RLF E V D +T ++ A SG++DE F M K ++
Sbjct: 214 ARDGDLLQARRLFE----ESPVRDVFTWTAMVFAYVQSGMLDEARRVFDEMPGKREMA-- 267
Query: 241 PDHFACMVDLLSRSGHLGDAYELMKSMHEPHAGAWGALLGACKLHGDSDLGEIVANQLFE 300
+ M+ + + A EL ++M + G+W ++ +GD A +LF+
Sbjct: 268 ---YNVMIAGYVQYKKMDMARELFEAMPCRNVGSWNTIISGYGQNGDI----AQARELFD 320
Query: 301 LEPQ 304
+ Q
Sbjct: 321 MMTQ 324
>Medtr5g006420.1 | organelle transcript processing protein, putative
| HC | chr5:911890-915336 | 20130731
Length = 726
Score = 285 bits (730), Expect = 4e-77, Method: Compositional matrix adjust.
Identities = 137/338 (40%), Positives = 217/338 (64%), Gaps = 2/338 (0%)
Query: 10 NAMLCGFVKDGDLSSARGVFDAMPEKNVVSFTTMIDGYAKAGDMAAARFLFEQATEKDVV 69
A++ + G + AR ++D + K+++ T M+ GYAK G + ARF+F+Q E+D+V
Sbjct: 261 TALINMYANCGAMDLARKIYDGLSSKHLIVSTAMLSGYAKLGMVKDARFIFDQMIERDLV 320
Query: 70 AWSALISGYVQNGQPNQALKVFLEMESKNVKPDEFILVSLMSATSQLGHLELAQWVDSYV 129
WSA+ISGY ++ QP +ALK+F EM K PD+ ++S++SA S +G L A W+ +YV
Sbjct: 321 CWSAMISGYAESDQPQEALKLFDEMLQKRSVPDQITMLSVISACSHVGALAQANWIHTYV 380
Query: 130 SKSSIDLQQDHVIAALLDMNAKCGNMDRALKLFKEMPKRDLVSYCSMIQGLSIHGCGEDA 189
+S + V AL+DM AKCGN+ +A ++F+ MP+++++S+ SMI ++HG + A
Sbjct: 381 DRSGFG-RALSVNNALIDMYAKCGNLVKAREVFENMPRKNVISWSSMINAFAMHGNADSA 439
Query: 190 VRLFNSMLMEGLVPDEVAFTIILTACSHSGLVDEGWNYFQSMKQKYGISPSPDHFACMVD 249
++LF M + P+ V F +L AC H+GLV+EG F SM ++GISP+ +H+ CMVD
Sbjct: 440 IKLFRRMKEVNIEPNGVTFIGVLYACGHAGLVEEGEKLFSSMINEHGISPTREHYGCMVD 499
Query: 250 LLSRSGHLGDAYELMKSM-HEPHAGAWGALLGACKLHGDSDLGEIVANQLFELEPQNAAN 308
L R+ L A EL+++M P+ WG+L+ AC++HG+++LGE A +L ELEP +
Sbjct: 500 LYCRANFLRKAIELIETMPFAPNVIIWGSLMSACQVHGEAELGEFAAKRLLELEPDHDGA 559
Query: 309 YILLSNIYAAAERWIDVSLVRSRMRERSVQKIPGCSKL 346
++LSNIYA +RW DV L+R M + + K S++
Sbjct: 560 LVVLSNIYAKEKRWNDVGLIRKSMSYKGISKEKASSRI 597
Score = 137 bits (345), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 79/280 (28%), Positives = 143/280 (51%), Gaps = 33/280 (11%)
Query: 41 TTMIDGYAKAGDMAAARFLFEQATEKDVVAWSALISGYVQNGQPNQALKVFLEMESKNVK 100
T +I YA + AR LF++ D VAW+ +I GY QNG + AL++F +M S ++K
Sbjct: 160 TGLIAMYASCRRIMDARLLFDKMCHPDAVAWNMIIDGYCQNGHYDDALRLFEDMRSSDMK 219
Query: 101 PDEFILVSLMSATSQLGHLELAQWVDSYVSKSSIDLQQDHVIAALLDMNAKCGNMDRALK 160
PD IL +++SA G+L + + +V + + H+ AL++M A CG MD A K
Sbjct: 220 PDSVILCTVLSACGHAGNLSYGRTIHEFVKDNGYAIDS-HLQTALINMYANCGAMDLARK 278
Query: 161 -------------------------------LFKEMPKRDLVSYCSMIQGLSIHGCGEDA 189
+F +M +RDLV + +MI G + ++A
Sbjct: 279 IYDGLSSKHLIVSTAMLSGYAKLGMVKDARFIFDQMIERDLVCWSAMISGYAESDQPQEA 338
Query: 190 VRLFNSMLMEGLVPDEVAFTIILTACSHSGLVDEGWNYFQSMKQKYGISPSPDHFACMVD 249
++LF+ ML + VPD++ +++ACSH G + + N+ + + G + ++D
Sbjct: 339 LKLFDEMLQKRSVPDQITMLSVISACSHVGALAQA-NWIHTYVDRSGFGRALSVNNALID 397
Query: 250 LLSRSGHLGDAYELMKSMHEPHAGAWGALLGACKLHGDSD 289
+ ++ G+L A E+ ++M + +W +++ A +HG++D
Sbjct: 398 MYAKCGNLVKAREVFENMPRKNVISWSSMINAFAMHGNAD 437
>Medtr4g086490.1 | PPR containing plant protein | HC |
chr4:33903624-33910415 | 20130731
Length = 1183
Score = 285 bits (729), Expect = 4e-77, Method: Compositional matrix adjust.
Identities = 143/384 (37%), Positives = 219/384 (57%), Gaps = 42/384 (10%)
Query: 1 MPQRNVASWNAMLCGFVKDGDLSSARGVFDAMPEK------------------------- 35
M + SW + + +V++G S A G+FD M K
Sbjct: 632 MGDTTIVSWTSTIAAYVREGLYSDAIGLFDEMQSKGVRPDIYTVTSIVHACACSSSLDKG 691
Query: 36 --------------NVVSFTTMIDGYAKAGDMAAARFLFEQATEKDVVAWSALISGYVQN 81
N+ +I+ YAK G + AR +F + KD+V+W+ +I GY QN
Sbjct: 692 RDVHSYVIKNGMGSNLPVTNALINMYAKCGSVEEARLVFSKIPVKDIVSWNTMIGGYSQN 751
Query: 82 GQPNQALKVFLEMESKNVKPDEFILVSLMSATSQLGHLELAQWVDSYVSKSSIDLQQDHV 141
PN+AL++FL+M+ K KPD+ + ++ A + L L+ + + ++ + HV
Sbjct: 752 SLPNEALELFLDMQ-KQFKPDDITMACVLPACAGLAALDKGREIHGHILRRGY-FSDLHV 809
Query: 142 IAALLDMNAKCGNMDRALKLFKEMPKRDLVSYCSMIQGLSIHGCGEDAVRLFNSMLMEGL 201
AL+DM AKCG + A LF +PK+DL+S+ MI G +HG G +A+ FN M + G+
Sbjct: 810 ACALVDMYAKCGLLVLAQLLFDMIPKKDLISWTVMIAGYGMHGFGNEAISTFNEMRIAGI 869
Query: 202 VPDEVAFTIILTACSHSGLVDEGWNYFQSMKQKYGISPSPDHFACMVDLLSRSGHLGDAY 261
PDE +F++IL ACSHSGL++EGW +F SM+ + G+ P +H+AC+VDLL+R G+L AY
Sbjct: 870 EPDESSFSVILNACSHSGLLNEGWKFFNSMRNECGVEPKLEHYACVVDLLARMGNLSKAY 929
Query: 262 ELMKSMH-EPHAGAWGALLGACKLHGDSDLGEIVANQLFELEPQNAANYILLSNIYAAAE 320
+ ++SM +P WG LL C++H D L E VA +FELEP N Y++L+N+YA AE
Sbjct: 930 KFIESMPIKPDTTIWGVLLSGCRIHHDVKLAEKVAEHIFELEPDNTRYYVVLANVYAEAE 989
Query: 321 RWIDVSLVRSRMRERSVQKIPGCS 344
+W +V +R RM++R ++ PGCS
Sbjct: 990 KWEEVKKLRKRMQKRGFKQNPGCS 1013
Score = 116 bits (290), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 85/311 (27%), Positives = 164/311 (52%), Gaps = 13/311 (4%)
Query: 11 AMLCGFVKDGDLSSARGV----FDAMPEKNVVSFTTMIDGYAKAGDMAAARFLFEQATEK 66
++L + G+LS R + A + VV T++D Y+K G++ A +F + +
Sbjct: 576 SVLVAWANIGNLSLGRALHGFGVKACFSEEVVFSNTLLDMYSKCGNLNGATEVFVKMGDT 635
Query: 67 DVVAWSALISGYVQNGQPNQALKVFLEMESKNVKPDEFILVSLMSATSQLGHLELAQWVD 126
+V+W++ I+ YV+ G + A+ +F EM+SK V+PD + + S++ A + L+ + V
Sbjct: 636 TIVSWTSTIAAYVREGLYSDAIGLFDEMQSKGVRPDIYTVTSIVHACACSSSLDKGRDVH 695
Query: 127 SYVSKSSIDLQQDHVIAALLDMNAKCGNMDRALKLFKEMPKRDLVSYCSMIQGLSIHGCG 186
SYV K+ + V AL++M AKCG+++ A +F ++P +D+VS+ +MI G S +
Sbjct: 696 SYVIKNGMG-SNLPVTNALINMYAKCGSVEEARLVFSKIPVKDIVSWNTMIGGYSQNSLP 754
Query: 187 EDAVRLFNSMLMEGLVPDEVAFTIILTACSHSGLVDEGWN-YFQSMKQKYGISPSPDHFA 245
+A+ LF M + PD++ +L AC+ +D+G + +++ Y S H A
Sbjct: 755 NEALELFLDM-QKQFKPDDITMACVLPACAGLAALDKGREIHGHILRRGYF---SDLHVA 810
Query: 246 C-MVDLLSRSGHLGDAYELMKSMHEPHAGAWGALLGACKLHGDSDLGEIVANQ--LFELE 302
C +VD+ ++ G L A L + + +W ++ +HG + N+ + +E
Sbjct: 811 CALVDMYAKCGLLVLAQLLFDMIPKKDLISWTVMIAGYGMHGFGNEAISTFNEMRIAGIE 870
Query: 303 PQNAANYILLS 313
P ++ ++L+
Sbjct: 871 PDESSFSVILN 881
Score = 108 bits (270), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 70/247 (28%), Positives = 131/247 (53%), Gaps = 4/247 (1%)
Query: 36 NVVSFTTMIDGYAKAGDMAAARFLFEQATEKDVVAWSALISGYVQNGQPNQALKVFLEME 95
N ++I Y K G + +A LF++ +E DVV+W+++I+G V NG L++F++M
Sbjct: 504 NTAVVNSLIAAYFKFGGVESAHNLFDELSEPDVVSWNSMINGCVVNGFSGNGLEIFIQML 563
Query: 96 SKNVKPDEFILVSLMSATSQLGHLELAQWVDSYVSKSSIDLQQDHVIA-ALLDMNAKCGN 154
V+ D LVS++ A + +G+L L + + + K+ ++ V + LLDM +KCGN
Sbjct: 564 ILGVEVDLTTLVSVLVAWANIGNLSLGRALHGFGVKAC--FSEEVVFSNTLLDMYSKCGN 621
Query: 155 MDRALKLFKEMPKRDLVSYCSMIQGLSIHGCGEDAVRLFNSMLMEGLVPDEVAFTIILTA 214
++ A ++F +M +VS+ S I G DA+ LF+ M +G+ PD T I+ A
Sbjct: 622 LNGATEVFVKMGDTTIVSWTSTIAAYVREGLYSDAIGLFDEMQSKGVRPDIYTVTSIVHA 681
Query: 215 CSHSGLVDEGWNYFQSMKQKYGISPSPDHFACMVDLLSRSGHLGDAYELMKSMHEPHAGA 274
C+ S +D+G + S K G+ + ++++ ++ G + +A + + +
Sbjct: 682 CACSSSLDKGRD-VHSYVIKNGMGSNLPVTNALINMYAKCGSVEEARLVFSKIPVKDIVS 740
Query: 275 WGALLGA 281
W ++G
Sbjct: 741 WNTMIGG 747
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 56/235 (23%), Positives = 107/235 (45%), Gaps = 2/235 (0%)
Query: 47 YAKAGDMAAARFLFEQATEKDVVAWSALISGYVQNGQPNQALKVFLEMESKNVKPDEFIL 106
Y GD+ R +F++ V W+ L+S Y + G +++ +F +M+ V + +
Sbjct: 414 YVNCGDLVQGRKIFDKIMNDKVFLWNLLMSEYAKIGNFRESVSLFKKMQKLGVVGNCYTF 473
Query: 107 VSLMSATSQLGHLELAQWVDSYVSKSSIDLQQDHVIAALLDMNAKCGNMDRALKLFKEMP 166
++ + LG ++ + V YV K V+ +L+ K G ++ A LF E+
Sbjct: 474 TCVLKCFAALGKVKECKRVHGYVLKLGFG-SNTAVVNSLIAAYFKFGGVESAHNLFDELS 532
Query: 167 KRDLVSYCSMIQGLSIHGCGEDAVRLFNSMLMEGLVPDEVAFTIILTACSHSGLVDEGWN 226
+ D+VS+ SMI G ++G + + +F ML+ G+ D +L A ++ G + G
Sbjct: 533 EPDVVSWNSMINGCVVNGFSGNGLEIFIQMLILGVEVDLTTLVSVLVAWANIGNLSLG-R 591
Query: 227 YFQSMKQKYGISPSPDHFACMVDLLSRSGHLGDAYELMKSMHEPHAGAWGALLGA 281
K S ++D+ S+ G+L A E+ M + +W + + A
Sbjct: 592 ALHGFGVKACFSEEVVFSNTLLDMYSKCGNLNGATEVFVKMGDTTIVSWTSTIAA 646
>Medtr4g113830.1 | organelle transcript processing protein, putative
| HC | chr4:46849211-46846995 | 20130731
Length = 738
Score = 285 bits (729), Expect = 5e-77, Method: Compositional matrix adjust.
Identities = 147/387 (37%), Positives = 224/387 (57%), Gaps = 41/387 (10%)
Query: 1 MPQRNVASWNAMLCGFVKDGDLSSARGVFDAMPEKNVVS--------------------- 39
+P ++V SWNAM+ G+V+ G A F M E NV+
Sbjct: 223 IPVKDVVSWNAMISGYVQSGRFEEAIVCFYEMQEANVLPNKSTMVVVLSACGHTRSGELG 282
Query: 40 ------------------FTTMIDGYAKAGDMAAARFLFEQATEKDVVAWSALISGYVQN 81
+ID Y K G+ AR LF+ EKDV++W+ +I GY
Sbjct: 283 KWIGSWVRDNGFGSNLQLTNALIDMYCKCGETDIARELFDGIEEKDVISWNTMIGGYSYL 342
Query: 82 GQPNQALKVFLEMESKNVKPDEFILVSLMSATSQLGHLELAQWVDSYVSKSSIDLQQDHV 141
+AL +F M NVKP++ + ++ A + LG L+L +WV +Y+ K+ + +
Sbjct: 343 SLYEEALALFEVMLRSNVKPNDVTFLGILHACACLGALDLGKWVHAYIDKNLRNSSNASL 402
Query: 142 IAALLDMNAKCGNMDRALKLFKEMPKRDLVSYCSMIQGLSIHGCGEDAVRLFNSMLMEGL 201
+L+DM AKCG ++ A ++F+ M R+L S+ +M+ G ++HG E A+ LF+ M+ +GL
Sbjct: 403 WTSLIDMYAKCGCIEAAERVFRSMHSRNLASWNAMLSGFAMHGHAERALALFSEMVNKGL 462
Query: 202 V-PDEVAFTIILTACSHSGLVDEGWNYFQSMKQKYGISPSPDHFACMVDLLSRSGHLGDA 260
PD++ F +L+AC+ +GLVD G YF+SM Q YGISP H+ CM+DLL+R+ +A
Sbjct: 463 FRPDDITFVGVLSACTQAGLVDLGHQYFRSMIQDYGISPKLQHYGCMIDLLARAEKFEEA 522
Query: 261 YELMKSMH-EPHAGAWGALLGACKLHGDSDLGEIVANQLFELEPQNAANYILLSNIYAAA 319
LMK+M EP WG+LL ACK HG + GE VA +LF+LEP+NA ++LLSNIYA A
Sbjct: 523 EILMKNMEMEPDGAIWGSLLSACKAHGRVEFGEYVAERLFQLEPENAGAFVLLSNIYAGA 582
Query: 320 ERWIDVSLVRSRMRERSVQKIPGCSKL 346
RW DV+ +R+R+ ++ ++K+PGC+ +
Sbjct: 583 GRWDDVARIRTRLNDKGMKKVPGCTSI 609
Score = 163 bits (413), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 97/288 (33%), Positives = 159/288 (55%), Gaps = 10/288 (3%)
Query: 20 GDLSSARGVFDAMPEKNVVSFTTMIDGYAKAGDMAAARFLFEQATEKDVVAWSALISGYV 79
G++ AR VFD ++ VSFT +I GY G + AR LF++ KDVV+W+A+ISGYV
Sbjct: 180 GEMDFARLVFDKSSLRDAVSFTALITGYVSQGCLDDARRLFDEIPVKDVVSWNAMISGYV 239
Query: 80 QNGQPNQALKVFLEMESKNVKPDEFILVSLMSATSQLGHLELAQWVDSYVSKSSI--DLQ 137
Q+G+ +A+ F EM+ NV P++ +V ++SA EL +W+ S+V + +LQ
Sbjct: 240 QSGRFEEAIVCFYEMQEANVLPNKSTMVVVLSACGHTRSGELGKWIGSWVRDNGFGSNLQ 299
Query: 138 QDHVIAALLDMNAKCGNMDRALKLFKEMPKRDLVSYCSMIQGLSIHGCGEDAVRLFNSML 197
+ AL+DM KCG D A +LF + ++D++S+ +MI G S E+A+ LF ML
Sbjct: 300 ---LTNALIDMYCKCGETDIARELFDGIEEKDVISWNTMIGGYSYLSLYEEALALFEVML 356
Query: 198 MEGLVPDEVAFTIILTACSHSGLVDEGWNYFQSMKQKYGISPSPDHFACMVDLLSRSGHL 257
+ P++V F IL AC+ G +D G + + S + + ++D+ ++ G +
Sbjct: 357 RSNVKPNDVTFLGILHACACLGALDLGKWVHAYIDKNLRNSSNASLWTSLIDMYAKCGCI 416
Query: 258 GDAYELMKSMHEPHAGAWGALLGACKLHGDSD-----LGEIVANQLFE 300
A + +SMH + +W A+L +HG ++ E+V LF
Sbjct: 417 EAAERVFRSMHSRNLASWNAMLSGFAMHGHAERALALFSEMVNKGLFR 464
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 60/268 (22%), Positives = 114/268 (42%), Gaps = 36/268 (13%)
Query: 48 AKAGDMAAARFLFE---QATEKDVVAWSALISGYVQNGQPNQALKVFLEMESKNVKPDEF 104
+ +GD++ A LFE Q + +V W++LI GY + P +L +F M V+P+
Sbjct: 73 SPSGDLSYALSLFEENQQHHKHNVFIWNSLIRGYSLSSSPLSSLHLFSRMLYYGVQPNSH 132
Query: 105 ILVSLMSATSQLGHLELAQWVDSYVSKSSIDLQQDHVIAALLDMNAKCGNMDRALKLFKE 164
L + ++ + + ++ K ++ HV +++ M A G MD A +F +
Sbjct: 133 TFPFLFKSCTKAKATHEGKQLHAHALKLALHFNP-HVHTSVIHMYASVGEMDFARLVFDK 191
Query: 165 MPKRDLVSYCSMIQGLSIHGCGEDAVRLFNSMLMEGLV---------------------- 202
RD VS+ ++I G GC +DA RLF+ + ++ +V
Sbjct: 192 SSLRDAVSFTALITGYVSQGCLDDARRLFDEIPVKDVVSWNAMISGYVQSGRFEEAIVCF 251
Query: 203 ---------PDEVAFTIILTACSHSGLVDEGWNYFQSMKQKYGISPSPDHFACMVDLLSR 253
P++ ++L+AC H+ + G + S + G + ++D+ +
Sbjct: 252 YEMQEANVLPNKSTMVVVLSACGHTRSGELG-KWIGSWVRDNGFGSNLQLTNALIDMYCK 310
Query: 254 SGHLGDAYELMKSMHEPHAGAWGALLGA 281
G A EL + E +W ++G
Sbjct: 311 CGETDIARELFDGIEEKDVISWNTMIGG 338
>Medtr7g011100.1 | pentatricopeptide (PPR) repeat protein | HC |
chr7:2910760-2909010 | 20130731
Length = 519
Score = 285 bits (728), Expect = 6e-77, Method: Compositional matrix adjust.
Identities = 141/341 (41%), Positives = 219/341 (64%), Gaps = 1/341 (0%)
Query: 5 NVASWNAMLCGFVKDGDLSSARGVFDAMPEKNVVSFTTMIDGYAKAGDMAAARFLFEQAT 64
+V +W++++ G+ + GDL AR +F+ MPE+++VS+ MI GY K G+M +AR LF++A
Sbjct: 173 DVVAWSSLIAGYARRGDLKVARKLFNEMPERDLVSWNVMITGYVKQGEMESARMLFDEAP 232
Query: 65 EKDVVAWSALISGYVQNGQPNQALKVFLEMESKNVKPDEFILVSLMSATSQLGHLELAQW 124
KDVV+W+A+I+GYV G QAL++F EM V PDE L+SL+SA + LG LE +
Sbjct: 233 VKDVVSWNAMIAGYVVCGLSKQALELFNEMCRAGVFPDEVTLLSLLSACADLGDLENGKK 292
Query: 125 VDSYVSKSSIDLQQDHVIAALLDMNAKCGNMDRALKLFKEMPKRDLVSYCSMIQGLSIHG 184
V + V + S+ + AL+DM AKCGN+ +L +F + +D++S+ S+I G+++HG
Sbjct: 293 VHAKVMEISMGKLSTLLGNALIDMYAKCGNIKESLDVFWSITDKDVISWNSVIVGMALHG 352
Query: 185 CGEDAVRLFNSMLMEGLVPDEVAFTIILTACSHSGLVDEGWNYFQSMKQKYGISPSPDHF 244
G++++ LF M + P+E+ F +L ACSH+G +DEG+ YF M +Y I P+ H
Sbjct: 353 HGKESLSLFKMMQRTKICPNEITFVGVLVACSHAGEIDEGYKYFDLMSSEYKIEPNIRHC 412
Query: 245 ACMVDLLSRSGHLGDAYELMKSMH-EPHAGAWGALLGACKLHGDSDLGEIVANQLFELEP 303
CMVD+L R+G L +A + + SM EP+A W LL ACK+HGD +L ++ +LF +
Sbjct: 413 GCMVDMLGRAGLLKEAAKFIDSMKIEPNAIIWRTLLAACKVHGDVELAKVANEKLFSMRK 472
Query: 304 QNAANYILLSNIYAAAERWIDVSLVRSRMRERSVQKIPGCS 344
++ +Y+L+SN+YA+ W VR M + V KI G S
Sbjct: 473 DHSGDYVLMSNLYASRGEWDGAEKVRKLMDDSGVTKIRGSS 513
Score = 95.5 bits (236), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 68/254 (26%), Positives = 115/254 (45%), Gaps = 46/254 (18%)
Query: 36 NVVSFTTMIDGYAKAGDMAAARFLFEQATEKDVVAWSALISGYVQNGQPNQALKVFLEME 95
N V T++ +AK GD+ A LF+ + + DVVAWS+LI+GY + G A K+F EM
Sbjct: 142 NAVVRNTLLVFHAKCGDLNVATSLFDDSCKGDVVAWSSLIAGYARRGDLKVARKLFNEMP 201
Query: 96 SKNVKPDEFILVSLMSATSQLGHLELAQW---VDSYVSKSSIDLQQDHVIAALLDMNAKC 152
+ +L W + YV K
Sbjct: 202 ER----------------------DLVSWNVMITGYV---------------------KQ 218
Query: 153 GNMDRALKLFKEMPKRDLVSYCSMIQGLSIHGCGEDAVRLFNSMLMEGLVPDEVAFTIIL 212
G M+ A LF E P +D+VS+ +MI G + G + A+ LFN M G+ PDEV +L
Sbjct: 219 GEMESARMLFDEAPVKDVVSWNAMIAGYVVCGLSKQALELFNEMCRAGVFPDEVTLLSLL 278
Query: 213 TACSHSGLVDEGWNYFQSMKQKYGISPSPDHFACMVDLLSRSGHLGDAYELMKSMHEPHA 272
+AC+ G ++ G + + S ++D+ ++ G++ ++ ++ S+ +
Sbjct: 279 SACADLGDLENGKKVHAKVMEISMGKLSTLLGNALIDMYAKCGNIKESLDVFWSITDKDV 338
Query: 273 GAWGALLGACKLHG 286
+W +++ LHG
Sbjct: 339 ISWNSVIVGMALHG 352
>Medtr5g023040.1 | pentatricopeptide (PPR) repeat protein | HC |
chr5:9142979-9147043 | 20130731
Length = 878
Score = 283 bits (725), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 142/345 (41%), Positives = 220/345 (63%), Gaps = 2/345 (0%)
Query: 1 MPQRNVASWNAMLCGFVKDGDLSSARGVFDAMPEKNVVSFTTMIDGYAKAGDMAAARFLF 60
+ +R+ WN+M+ G+ + G +S A +F MP KN VS+ TMI GYA+AG+M A +F
Sbjct: 354 LNKRDAICWNSMIAGYCQSGRMSEALNLFRQMPVKNAVSWNTMISGYAQAGEMDRATEIF 413
Query: 61 EQATEKDVVAWSALISGYVQNGQPNQALKVFLEMESKNVKPDEFILVSLMSATSQLGHLE 120
E ++V++W++LI+G++QNG ALK + M + KPD+ +S+ + L L+
Sbjct: 414 EAMGVRNVISWNSLITGFLQNGLYLDALKSLVLMGQEGKKPDQSTFACSLSSCANLAALQ 473
Query: 121 LAQWVDSYVSKSSIDLQQDHVIAALLDMNAKCGNMDRALKLFKEMPKRDLVSYCSMIQGL 180
+ + + + KS + V AL+ M AKCG + A K+FK++ DL+S+ S+I G
Sbjct: 474 VGKQLHELILKSGY-INDLFVSNALIAMYAKCGGVQSAEKVFKDIEGVDLISWNSLISGY 532
Query: 181 SIHGCGEDAVRLFNSMLMEGLVPDEVAFTIILTACSHSGLVDEGWNYFQSMKQKYGISPS 240
+++G +A F M EG VPDEV F +L+ACSH+GL ++G + F+ M + + I P
Sbjct: 533 ALNGYANEAFWAFEQMSSEGTVPDEVTFIGMLSACSHAGLTNQGVDLFKCMIEGFAIEPL 592
Query: 241 PDHFACMVDLLSRSGHLGDAYELMKSMH-EPHAGAWGALLGACKLHGDSDLGEIVANQLF 299
+H++C+VDLL R G L +A+ +++ M + +AG WG+LL AC++H + +LG+I A +L
Sbjct: 593 AEHYSCLVDLLGRMGRLEEAFNIVRGMKVKANAGLWGSLLAACRVHKNMELGKIAALRLL 652
Query: 300 ELEPQNAANYILLSNIYAAAERWIDVSLVRSRMRERSVQKIPGCS 344
ELEP NA+NYI LSN++A A RW DV +R MRER K+PGCS
Sbjct: 653 ELEPHNASNYITLSNMHAEAGRWEDVERLRVLMRERRAGKLPGCS 697
Score = 120 bits (302), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 75/238 (31%), Positives = 134/238 (56%), Gaps = 13/238 (5%)
Query: 1 MPQRNVASWNAMLCGFVKDGDLSSARGVFDAMPEKNVVSFTTMIDGYAKAGDMAAARFLF 60
M +RNV SWN M+ GFV + DL SA +F+ +P+ N VS+ TM+ G+A+ G + AR LF
Sbjct: 199 MAERNVVSWNLMVAGFVNNCDLGSAWELFEKIPDPNAVSWVTMLCGFARHGKIVEARKLF 258
Query: 61 EQATEKDVVAWSALISGYVQNGQPNQALKVFLEMESKNVKPDEFILVSLMSATSQLGHLE 120
++ K+VV+W+A+I+ YVQ+ Q ++A+K+F E K D ++++ ++G L+
Sbjct: 259 DRMPCKNVVSWNAMIAAYVQDLQIDEAVKLFKETPYK----DCVSWTTMINGYVRVGKLD 314
Query: 121 LAQWVDSYVSKSSIDLQQDHVIAALLDMNAKCGNMDRALKLFKEMPKRDLVSYCSMIQGL 180
A+ V + + + + AL+ + G +D A ++F ++ KRD + + SMI G
Sbjct: 315 EAREVYNQMPYKDVAAK-----TALMSGLIQNGRIDEASQVFSQLNKRDAICWNSMIAGY 369
Query: 181 SIHGCGEDAVRLFNSMLMEGLVPDEVAFTIILTACSHSGLVDEGWNYFQSMKQKYGIS 238
G +A+ LF M V + V++ +++ + +G +D F++M + IS
Sbjct: 370 CQSGRMSEALNLFRQM----PVKNAVSWNTMISGYAQAGEMDRATEIFEAMGVRNVIS 423
Score = 119 bits (299), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 82/298 (27%), Positives = 150/298 (50%), Gaps = 26/298 (8%)
Query: 5 NVASWNAMLCGFVKDGDLSSARGVFDAMPEKNVVSFTTMIDGYAKAGDMAAARFLFEQAT 64
+ A WNAM+ G+ K G A VF+ MP K++VS+ +M+ GY + G M A FE+
Sbjct: 141 DTACWNAMIAGYAKKGRFDDAEKVFEKMPVKDLVSYNSMLAGYTQNGKMGLAMKFFERMA 200
Query: 65 EKDVVAWSALISGYVQNGQPNQALKVFLEMESKNVKPDEFILVSLMSATSQLGHL-ELAQ 123
E++VV+W+ +++G+V N A ++F ++ P+ V+++ ++ G + E +
Sbjct: 201 ERNVVSWNLMVAGFVNNCDLGSAWELFEKIPD----PNAVSWVTMLCGFARHGKIVEARK 256
Query: 124 WVDSYVSKSSIDLQQDHVIAALL-DMNAKCGNMDRALKLFKEMPKRDLVSYCSMIQGLSI 182
D K+ + + +IAA + D+ +D A+KLFKE P +D VS+ +MI G
Sbjct: 257 LFDRMPCKNVVSW--NAMIAAYVQDL-----QIDEAVKLFKETPYKDCVSWTTMINGYVR 309
Query: 183 HGCGEDAVRLFNSMLMEGLVPDEVAFTIILTACSHSGLVDEGWNYFQSMKQKYGISPSPD 242
G ++A ++N M + D A T +++ +G +DE F + ++ I
Sbjct: 310 VGKLDEAREVYNQMPYK----DVAAKTALMSGLIQNGRIDEASQVFSQLNKRDAIC---- 361
Query: 243 HFACMVDLLSRSGHLGDAYELMKSMHEPHAGAWGALLGACKLHGDSDLGEIVANQLFE 300
+ M+ +SG + +A L + M +A +W ++ G+ D A ++FE
Sbjct: 362 -WNSMIAGYCQSGRMSEALNLFRQMPVKNAVSWNTMISGYAQAGEMDR----ATEIFE 414
Score = 105 bits (262), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 82/299 (27%), Positives = 149/299 (49%), Gaps = 19/299 (6%)
Query: 1 MPQRNVASWNAMLCGFVKDGDLSSARGVFDAMPEKNVVSFTTMIDGYAKAGDMAAARFLF 60
M QRN+ SWN M+ G++ + + A +FD M E++ S+ MI Y + G + AR LF
Sbjct: 74 MSQRNLVSWNTMIAGYLHNNMVEEAHKLFDLMAERDNFSWALMITCYTRKGMLEKARELF 133
Query: 61 EQATEK-DVVAWSALISGYVQNGQPNQALKVFLEMESKNVKPDEFILVSLMSATSQLGHL 119
E +K D W+A+I+GY + G+ + A KVF +M K D S+++ +Q G +
Sbjct: 134 ELVPDKLDTACWNAMIAGYAKKGRFDDAEKVFEKMPVK----DLVSYNSMLAGYTQNGKM 189
Query: 120 ELAQWVDSYVSKSSIDLQQDHVIAALLDMNAKCGNMDRALKLFKEMPKRDLVSYCSMIQG 179
LA +++ ++ + + ++A ++ C ++ A +LF+++P + VS+ +M+ G
Sbjct: 190 GLAMKFFERMAERNV-VSWNLMVAGFVN---NC-DLGSAWELFEKIPDPNAVSWVTMLCG 244
Query: 180 LSIHGCGEDAVRLFNSMLMEGLVPDEVAFTIILTACSHSGLVDEGWNYFQSMKQKYGISP 239
+ HG +A +LF+ M + + V++ ++ A +DE F+ K +S
Sbjct: 245 FARHGKIVEARKLFDRMPCKNV----VSWNAMIAAYVQDLQIDEAVKLFKETPYKDCVS- 299
Query: 240 SPDHFACMVDLLSRSGHLGDAYELMKSMHEPHAGAWGALLGACKLHGDSDLGEIVANQL 298
+ M++ R G L +A E+ M A AL+ +G D V +QL
Sbjct: 300 ----WTTMINGYVRVGKLDEAREVYNQMPYKDVAAKTALMSGLIQNGRIDEASQVFSQL 354
Score = 100 bits (249), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 72/278 (25%), Positives = 135/278 (48%), Gaps = 17/278 (6%)
Query: 4 RNVASWNAMLCGFVKDGDLSSARGVFDAMPEKNVVSFTTMIDGYAKAGDMAAARFLFEQA 63
+NV + N + K G + A+ VF + KN ++ +M+ +AK G ++ AR LF++
Sbjct: 15 KNVFNQNKKIIYLGKQGKIDEAKRVFSNVIHKNHATYNSMVTVFAKNGRVSDARQLFDKM 74
Query: 64 TEKDVVAWSALISGYVQNGQPNQALKVFLEMESKNVKPDEFILVSLMSATSQLGHLELAQ 123
+++++V+W+ +I+GY+ N +A K+F M + D F +++ ++ G LE A+
Sbjct: 75 SQRNLVSWNTMIAGYLHNNMVEEAHKLFDLMAER----DNFSWALMITCYTRKGMLEKAR 130
Query: 124 WVDSYVSKSSIDLQQDHVIAALLDMNAKCGNMDRALKLFKEMPKRDLVSYCSMIQGLSIH 183
+ V D A++ AK G D A K+F++MP +DLVSY SM+ G + +
Sbjct: 131 ELFELVP----DKLDTACWNAMIAGYAKKGRFDDAEKVFEKMPVKDLVSYNSMLAGYTQN 186
Query: 184 GCGEDAVRLFNSMLMEGLVPDEVAFTIILTACSHSGLVDEGWNYFQSMKQKYGISPSPDH 243
G A++ F M +V + + C + W F+ + P+
Sbjct: 187 GKMGLAMKFFERMAERNVVSWNLMVAGFVNNCD----LGSAWELFEKIP-----DPNAVS 237
Query: 244 FACMVDLLSRSGHLGDAYELMKSMHEPHAGAWGALLGA 281
+ M+ +R G + +A +L M + +W A++ A
Sbjct: 238 WVTMLCGFARHGKIVEARKLFDRMPCKNVVSWNAMIAA 275
>Medtr8g086560.1 | PPR containing plant protein | HC |
chr8:35911406-35914374 | 20130731
Length = 908
Score = 283 bits (723), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 143/384 (37%), Positives = 219/384 (57%), Gaps = 42/384 (10%)
Query: 1 MPQRNVASWNAMLCGFVKDGDLSSARGVFDAMPEK------------------------- 35
M + SW +++ +V++G S A G+FD M K
Sbjct: 357 MGDTTIVSWTSIIAAYVREGLYSDAIGLFDEMQSKGVRPDIYTVTSIVHACACSSSLDKG 416
Query: 36 --------------NVVSFTTMIDGYAKAGDMAAARFLFEQATEKDVVAWSALISGYVQN 81
N+ +I+ YAK G + AR +F + KD+V+W+ +I GY QN
Sbjct: 417 RDVHSYVIKNGMGSNLPVTNALINMYAKCGSVEEARLVFSKIPVKDIVSWNTMIGGYSQN 476
Query: 82 GQPNQALKVFLEMESKNVKPDEFILVSLMSATSQLGHLELAQWVDSYVSKSSIDLQQDHV 141
PN+AL++FL+M+ K KPD+ + ++ A + L L+ + + ++ + HV
Sbjct: 477 LLPNEALELFLDMQ-KQFKPDDITMACVLPACAGLAALDKGREIHGHILRRGY-FSDLHV 534
Query: 142 IAALLDMNAKCGNMDRALKLFKEMPKRDLVSYCSMIQGLSIHGCGEDAVRLFNSMLMEGL 201
AL+DM AKCG + A LF +PK+DL+S+ MI G +HG G +A+ FN M + G+
Sbjct: 535 ACALVDMYAKCGLLVLAQLLFDMIPKKDLISWTVMIAGYGMHGFGNEAISTFNEMRIAGI 594
Query: 202 VPDEVAFTIILTACSHSGLVDEGWNYFQSMKQKYGISPSPDHFACMVDLLSRSGHLGDAY 261
PDE +F+ IL ACSHSGL++EGW +F SM+ + G+ P +H+AC+VDLL+R G+L AY
Sbjct: 595 EPDESSFSAILNACSHSGLLNEGWKFFNSMRNECGVEPKLEHYACVVDLLARMGNLSKAY 654
Query: 262 ELMKSMH-EPHAGAWGALLGACKLHGDSDLGEIVANQLFELEPQNAANYILLSNIYAAAE 320
+ ++SM +P WG LL C++H D L E VA +FELEP N Y++L+N+YA AE
Sbjct: 655 KFIESMPIKPDTTIWGVLLSGCRIHHDVKLAEKVAEHIFELEPDNTRYYVVLANVYAEAE 714
Query: 321 RWIDVSLVRSRMRERSVQKIPGCS 344
+W +V +R RM++R ++ PGCS
Sbjct: 715 KWEEVKKLRKRMQKRGFKQNPGCS 738
Score = 115 bits (289), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 80/273 (29%), Positives = 148/273 (54%), Gaps = 11/273 (4%)
Query: 20 GDLSSARGV----FDAMPEKNVVSFTTMIDGYAKAGDMAAARFLFEQATEKDVVAWSALI 75
G+LS R + A + VV T++D Y+K G++ A +F + + +V+W+++I
Sbjct: 310 GNLSLGRALHGFGVKACFSEEVVFSNTLLDMYSKCGNLNGATEVFVKMGDTTIVSWTSII 369
Query: 76 SGYVQNGQPNQALKVFLEMESKNVKPDEFILVSLMSATSQLGHLELAQWVDSYVSKSSID 135
+ YV+ G + A+ +F EM+SK V+PD + + S++ A + L+ + V SYV K+ +
Sbjct: 370 AAYVREGLYSDAIGLFDEMQSKGVRPDIYTVTSIVHACACSSSLDKGRDVHSYVIKNGMG 429
Query: 136 LQQDHVIAALLDMNAKCGNMDRALKLFKEMPKRDLVSYCSMIQGLSIHGCGEDAVRLFNS 195
V AL++M AKCG+++ A +F ++P +D+VS+ +MI G S + +A+ LF
Sbjct: 430 -SNLPVTNALINMYAKCGSVEEARLVFSKIPVKDIVSWNTMIGGYSQNLLPNEALELFLD 488
Query: 196 MLMEGLVPDEVAFTIILTACSHSGLVDEGWN-YFQSMKQKYGISPSPDHFAC-MVDLLSR 253
M + PD++ +L AC+ +D+G + +++ Y S H AC +VD+ ++
Sbjct: 489 M-QKQFKPDDITMACVLPACAGLAALDKGREIHGHILRRGY---FSDLHVACALVDMYAK 544
Query: 254 SGHLGDAYELMKSMHEPHAGAWGALLGACKLHG 286
G L A L + + +W ++ +HG
Sbjct: 545 CGLLVLAQLLFDMIPKKDLISWTVMIAGYGMHG 577
Score = 110 bits (275), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 70/247 (28%), Positives = 132/247 (53%), Gaps = 4/247 (1%)
Query: 36 NVVSFTTMIDGYAKAGDMAAARFLFEQATEKDVVAWSALISGYVQNGQPNQALKVFLEME 95
N ++I Y K G + +A LF++ +E DVV+W+++I+G V NG L++F++M
Sbjct: 229 NTAVVNSLIAAYFKFGGVESAHNLFDELSEPDVVSWNSMINGCVVNGFSGNGLEIFIQML 288
Query: 96 SKNVKPDEFILVSLMSATSQLGHLELAQWVDSYVSKSSIDLQQDHVIA-ALLDMNAKCGN 154
V+ D LVS++ A + +G+L L + + + K+ ++ V + LLDM +KCGN
Sbjct: 289 ILGVEVDLTTLVSVLVACANIGNLSLGRALHGFGVKAC--FSEEVVFSNTLLDMYSKCGN 346
Query: 155 MDRALKLFKEMPKRDLVSYCSMIQGLSIHGCGEDAVRLFNSMLMEGLVPDEVAFTIILTA 214
++ A ++F +M +VS+ S+I G DA+ LF+ M +G+ PD T I+ A
Sbjct: 347 LNGATEVFVKMGDTTIVSWTSIIAAYVREGLYSDAIGLFDEMQSKGVRPDIYTVTSIVHA 406
Query: 215 CSHSGLVDEGWNYFQSMKQKYGISPSPDHFACMVDLLSRSGHLGDAYELMKSMHEPHAGA 274
C+ S +D+G + S K G+ + ++++ ++ G + +A + + +
Sbjct: 407 CACSSSLDKGRD-VHSYVIKNGMGSNLPVTNALINMYAKCGSVEEARLVFSKIPVKDIVS 465
Query: 275 WGALLGA 281
W ++G
Sbjct: 466 WNTMIGG 472
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 57/235 (24%), Positives = 109/235 (46%), Gaps = 2/235 (0%)
Query: 47 YAKAGDMAAARFLFEQATEKDVVAWSALISGYVQNGQPNQALKVFLEMESKNVKPDEFIL 106
Y GD+ R +F++ V W+ L+S Y + G +++ +F +M+ V + +
Sbjct: 139 YVNCGDLVQGRKIFDKIMNDKVFLWNLLMSEYAKIGNFRESVSLFKKMQKLGVVGNCYTF 198
Query: 107 VSLMSATSQLGHLELAQWVDSYVSKSSIDLQQDHVIAALLDMNAKCGNMDRALKLFKEMP 166
++ + LG ++ + V YV K V+ +L+ K G ++ A LF E+
Sbjct: 199 TCVLKCFAALGKVKECKRVHGYVLKLGFG-SNTAVVNSLIAAYFKFGGVESAHNLFDELS 257
Query: 167 KRDLVSYCSMIQGLSIHGCGEDAVRLFNSMLMEGLVPDEVAFTIILTACSHSGLVDEGWN 226
+ D+VS+ SMI G ++G + + +F ML+ G+ D +L AC++ G + G
Sbjct: 258 EPDVVSWNSMINGCVVNGFSGNGLEIFIQMLILGVEVDLTTLVSVLVACANIGNLSLG-R 316
Query: 227 YFQSMKQKYGISPSPDHFACMVDLLSRSGHLGDAYELMKSMHEPHAGAWGALLGA 281
K S ++D+ S+ G+L A E+ M + +W +++ A
Sbjct: 317 ALHGFGVKACFSEEVVFSNTLLDMYSKCGNLNGATEVFVKMGDTTIVSWTSIIAA 371
>Medtr3g096420.1 | PPR containing plant-like protein | HC |
chr3:44072693-44069577 | 20130731
Length = 705
Score = 282 bits (722), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 144/341 (42%), Positives = 221/341 (64%), Gaps = 6/341 (1%)
Query: 10 NAMLCGFVKDGDLSSARGVFDAMPEKNVVSFTTMIDGYAKAGDMAAARFLFEQATEKDVV 69
NA++ + K ++ AR VFD MP ++VVS T+M+ GYAKA + AAR +F E++VV
Sbjct: 292 NALVDMYAKCRRVNEARLVFDRMPLRDVVSETSMVSGYAKASSVKAARLMFSNMMERNVV 351
Query: 70 AWSALISGYVQNGQPNQALKVFLEMESKNVKPDEFILVSLMSATSQLGHLELAQWVDSYV 129
+W+ALI+GY QNG+ +A+++FL ++ +++ P + +L++A + L L+L + +++
Sbjct: 352 SWNALIAGYTQNGENEEAVRLFLLLKRESIWPTHYTFGNLLNACANLADLKLGRQAHTHI 411
Query: 130 SKSSIDLQQDH-----VIAALLDMNAKCGNMDRALKLFKEMPKRDLVSYCSMIQGLSIHG 184
K + V +L+DM KCG ++ +F+ M +RD VS+ +MI G + +G
Sbjct: 412 LKHGFWFKSGEDSDIFVGNSLIDMYMKCGLVEDGRLVFERMLERDNVSWNAMIVGYAQNG 471
Query: 185 CGEDAVRLFNSMLMEGLVPDEVAFTIILTACSHSGLVDEGWNYFQSMKQKYGISPSPDHF 244
G +A+ +F ML+ G PD V +L+ACSH+GLV+EG YFQSM ++G+ P DH+
Sbjct: 472 YGTEALEIFREMLVSGERPDHVTMIGVLSACSHAGLVEEGRCYFQSMTIEHGLVPVKDHY 531
Query: 245 ACMVDLLSRSGHLGDAYELMKSM-HEPHAGAWGALLGACKLHGDSDLGEIVANQLFELEP 303
CMVDLL R+G L +A L+++M EP A WG+LL ACK+HG+ LG+ VA +L E++P
Sbjct: 532 TCMVDLLGRAGCLDEANNLIQTMPMEPDAVVWGSLLAACKVHGNITLGKYVAERLLEIDP 591
Query: 304 QNAANYILLSNIYAAAERWIDVSLVRSRMRERSVQKIPGCS 344
N+ Y+LLSN+YA RW DV VR +MR+ V K PGCS
Sbjct: 592 LNSGPYVLLSNMYAELGRWKDVVRVRKQMRQMGVIKQPGCS 632
Score = 105 bits (262), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 63/211 (29%), Positives = 115/211 (54%), Gaps = 6/211 (2%)
Query: 14 CGFVKDGDLSSARGVFDAMPEKNVVSFTTMIDGYAKAGDMAAARFLFEQATEKDVVAWSA 73
CGF++D AR VFD M ++N S+ ++ K G + A LF+ E+D +W+A
Sbjct: 67 CGFLED-----ARKVFDHMQQRNTFSWNAVLGALTKFGALDEALNLFKCMPERDQCSWNA 121
Query: 74 LISGYVQNGQPNQALKVFLEMESKNVKPDEFILVSLMSATSQLGHLELAQWVDSYVSKSS 133
++SG+ Q + +AL+ ++M S++ +E+ S +SA + L L + + ++KS
Sbjct: 122 MVSGFAQRDRFEEALRFVVDMHSEDFVLNEYSFGSALSACAGLMDLSIGVQIHGLIAKSR 181
Query: 134 IDLQQDHVIAALLDMNAKCGNMDRALKLFKEMPKRDLVSYCSMIQGLSIHGCGEDAVRLF 193
L ++ +AL+DM +KC + A + F +M R++VS+ S+I +G A+ +F
Sbjct: 182 YSLDV-YMGSALVDMYSKCRVVASAQRAFDDMDVRNIVSWNSLITCYEQNGPAGKALEVF 240
Query: 194 NSMLMEGLVPDEVAFTIILTACSHSGLVDEG 224
M+ G+ PDE+ + +AC+ + EG
Sbjct: 241 VRMMNCGIEPDEITLASVASACASLSAIREG 271
Score = 102 bits (253), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 94/363 (25%), Positives = 154/363 (42%), Gaps = 93/363 (25%)
Query: 1 MPQRNVASWNAMLCGFVKDGDLSSA-RGVFDAMPEK---NVVSF---------------- 40
MP+R+ SWNAM+ GF + A R V D E N SF
Sbjct: 111 MPERDQCSWNAMVSGFAQRDRFEEALRFVVDMHSEDFVLNEYSFGSALSACAGLMDLSIG 170
Query: 41 -------------------TTMIDGYAKAGDMAAARFLFEQATEKDVVAWSALISGYVQN 81
+ ++D Y+K +A+A+ F+ +++V+W++LI+ Y QN
Sbjct: 171 VQIHGLIAKSRYSLDVYMGSALVDMYSKCRVVASAQRAFDDMDVRNIVSWNSLITCYEQN 230
Query: 82 GQPNQALKVFLEMESKNVKPDEFILVSLMSATSQLGHLELAQWVDSYVSKSSIDLQQDHV 141
G +AL+VF+ M + ++PDE L S+ SA + L + + + V K + D V
Sbjct: 231 GPAGKALEVFVRMMNCGIEPDEITLASVASACASLSAIREGLQIHARVMKHD-KYRNDLV 289
Query: 142 IA-ALLDMNAKCGNMDRALKLFKEMPKRDLVSYCSM------------------------ 176
+ AL+DM AKC ++ A +F MP RD+VS SM
Sbjct: 290 LGNALVDMYAKCRRVNEARLVFDRMPLRDVVSETSMVSGYAKASSVKAARLMFSNMMERN 349
Query: 177 -------IQGLSIHGCGEDAVRLFNSMLMEGLVPDEVAFTIILTAC-----------SHS 218
I G + +G E+AVRLF + E + P F +L AC +H+
Sbjct: 350 VVSWNALIAGYTQNGENEEAVRLFLLLKRESIWPTHYTFGNLLNACANLADLKLGRQAHT 409
Query: 219 GLVDEGWNYFQSMKQKYGISPSPDHFA--CMVDLLSRSGHLGDAYELMKSMHEPHAGAWG 276
++ G+ +F+S D F ++D+ + G + D + + M E +W
Sbjct: 410 HILKHGF-WFKS-------GEDSDIFVGNSLIDMYMKCGLVEDGRLVFERMLERDNVSWN 461
Query: 277 ALL 279
A++
Sbjct: 462 AMI 464
>Medtr7g056073.1 | basic helix loop helix protein, putative | HC |
chr7:19429810-19428206 | 20130731
Length = 534
Score = 280 bits (717), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 138/350 (39%), Positives = 224/350 (64%), Gaps = 9/350 (2%)
Query: 1 MPQRNVASWNAMLCGFVKDGDLSSARGVFDAMPE-KNVVSFTTMIDGYAKAGDMAAARFL 59
M R+V +W M+ +V++ D+ SA +F MPE KN ++ +IDGYAK G++ F
Sbjct: 139 MSARDVYAWTTMISAYVRNNDVESAEILFVEMPEGKNTATWNAVIDGYAKLGNIERVEFF 198
Query: 60 FEQATEKDVVAWSALISGYVQNGQPNQALKVFLEMESK-NVKPDEFILVSLMSATSQLGH 118
F++ KD+++W+ L+S Y++N + + +K+F EM ++ V PDE + +++SA + LG
Sbjct: 199 FKEIPSKDIISWTTLMSCYLKNKRYGEVVKLFHEMVNEGKVVPDEVAITTVISACAHLGA 258
Query: 119 LELAQWVDSY--VSKSSIDLQQDHVIAALLDMNAKCGNMDRALKLFKEMPKRDLVSYCSM 176
L + V Y VS ID+ ++ ++L+DM AKCG+++R+L +F ++ +++L + SM
Sbjct: 259 LGFGKEVHFYLMVSGFGIDV---YIGSSLIDMYAKCGSLERSLLVFYKLKEKNLFCWNSM 315
Query: 177 IQGLSIHGCGEDAVRLFNSMLMEGLVPDEVAFTIILTACSHSGLVDEGWNYFQSMKQKYG 236
I GL+ HG ++A+R+F M EG+ P+ V F +LTAC+H+G + EG +F SM + Y
Sbjct: 316 IDGLAAHGYAKEALRMFAEMEREGIRPNRVTFVSVLTACTHAGFIQEGRRFFTSMIEDYC 375
Query: 237 ISPSPDHFACMVDLLSRSGHLGDAYELMKSMH-EPHAGAWGALLGACKLHGDSDLGEIVA 295
ISP +H+ CMVDLLS+ G L DA E+++ M EP++ WGALL CK+H + ++ +
Sbjct: 376 ISPQVEHYGCMVDLLSKGGLLEDALEMIRGMRFEPNSFIWGALLNGCKVHRNLEIARVTV 435
Query: 296 NQLFELEPQNAANYILLSNIYAAAERWIDVSLVRSRMRERSVQK-IPGCS 344
L LEP N+ +Y LL N+YA RW DV+ +R+ M++ V+K PG S
Sbjct: 436 RNLMILEPSNSGHYSLLVNMYAEVNRWSDVAKIRTEMKDLGVEKRCPGSS 485
Score = 98.6 bits (244), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 67/249 (26%), Positives = 120/249 (48%), Gaps = 45/249 (18%)
Query: 41 TTMIDGYAKAGDMAAARFLFEQATEKDVVAWSALISGYVQNGQPNQALKVFLEM-ESKNV 99
TT+++ Y+ G + AR +F++ + +DV AW+ +IS YV+N A +F+EM E KN
Sbjct: 117 TTLVEFYSSLGYVCDARKVFDEMSARDVYAWTTMISAYVRNNDVESAEILFVEMPEGKNT 176
Query: 100 KPDEFILVSLMSATSQLGHLELAQWVDSYVSKSSIDLQQDHVIAALLDMNAKCGNMDRAL 159
A W A++D AK GN++R
Sbjct: 177 ----------------------ATW------------------NAVIDGYAKLGNIERVE 196
Query: 160 KLFKEMPKRDLVSYCSMIQGLSIHGCGEDAVRLFNSMLMEG-LVPDEVAFTIILTACSHS 218
FKE+P +D++S+ +++ + + V+LF+ M+ EG +VPDEVA T +++AC+H
Sbjct: 197 FFFKEIPSKDIISWTTLMSCYLKNKRYGEVVKLFHEMVNEGKVVPDEVAITTVISACAHL 256
Query: 219 GLVDEGWN-YFQSMKQKYGISPSPDHFACMVDLLSRSGHLGDAYELMKSMHEPHAGAWGA 277
G + G +F M +GI + ++D+ ++ G L + + + E + W +
Sbjct: 257 GALGFGKEVHFYLMVSGFGIDVYIG--SSLIDMYAKCGSLERSLLVFYKLKEKNLFCWNS 314
Query: 278 LLGACKLHG 286
++ HG
Sbjct: 315 MIDGLAAHG 323
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 38/137 (27%), Positives = 63/137 (45%), Gaps = 1/137 (0%)
Query: 60 FEQATEKDVVAWSALISGYVQNGQPNQALKVFLEMESKNVKPDEFILVSLMSATSQLGHL 119
F Q T+ + + ++ALI V + NQAL ++ M +V P + SL+ A + L
Sbjct: 35 FTQITKPNTLVYNALIKACVHSHSSNQALLHYIHMLRSSVIPSSYSFSSLIKACTLLTDA 94
Query: 120 ELAQWVDSYVSKSSIDLQQDHVIAALLDMNAKCGNMDRALKLFKEMPKRDLVSYCSMIQG 179
+ + +V K D V L++ + G + A K+F EM RD+ ++ +MI
Sbjct: 95 VNGKTLHGHVWKYGFD-SHVFVQTTLVEFYSSLGYVCDARKVFDEMSARDVYAWTTMISA 153
Query: 180 LSIHGCGEDAVRLFNSM 196
+ E A LF M
Sbjct: 154 YVRNNDVESAEILFVEM 170
>Medtr7g078420.1 | PPR containing plant-like protein | HC |
chr7:29654282-29650656 | 20130731
Length = 646
Score = 280 bits (716), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 144/342 (42%), Positives = 221/342 (64%), Gaps = 11/342 (3%)
Query: 10 NAMLCGFVKDGDLSSARGVFDAM---PEKNVVSFTTMIDGYAKAGDMAAARFLFEQATEK 66
A+L K G+L +A +F+ + ++ V + MI YA+ GD+ +AR LF++ ++
Sbjct: 307 TALLDMHAKCGNLEAAHKIFEQLGVYKYRSSVPWNAMISAYARVGDLPSARHLFDKMPQR 366
Query: 67 DVVAWSALISGYVQNGQPNQALKVFLEM-ESKNVKPDEFILVSLMSATSQLGHLELAQWV 125
D V+W+++I+GY QNG+ +A+K+F EM S++ KPDE +VS+ SA LG L L W
Sbjct: 367 DTVSWNSMIAGYTQNGESVKAIKLFEEMISSEDSKPDEVTMVSVFSACGHLGELGLGNWA 426
Query: 126 DSYVSKSSIDLQQDHVIAALLDMNAKCGNMDRALKLFKEMPKRDLVSYCSMIQGLSIHGC 185
S + ++ I + V +L+ M ++CG+M A+ +F+EM RDLVSY ++I G + HG
Sbjct: 427 VSILKENHIQISIS-VYNSLISMYSRCGSMQDAVLIFQEMATRDLVSYNTLISGFAEHGH 485
Query: 186 GEDAVRLFNSMLMEGLVPDEVAFTIILTACSHSGLVDEGWNYFQSMKQKYGISPSPDHFA 245
G +++ L M +G+ PD + + ILTACSH+GL+ EG F+S+K P DH+A
Sbjct: 486 GMESIELLLKMKEDGIEPDRITYIAILTACSHAGLLGEGQRLFESIK-----FPDVDHYA 540
Query: 246 CMVDLLSRSGHLGDAYELMKSM-HEPHAGAWGALLGACKLHGDSDLGEIVANQLFELEPQ 304
CM+D+L R+G L +A +L++SM EPHAG +G+LL A +H +LGE+ A +LF++EP
Sbjct: 541 CMIDMLGRAGRLEEAMKLIQSMPMEPHAGIYGSLLNATSIHKQVELGELAAAKLFKVEPH 600
Query: 305 NAANYILLSNIYAAAERWIDVSLVRSRMRERSVQKIPGCSKL 346
N+ NY+LLSNIYA+A RW D VR MR++ V+K G S L
Sbjct: 601 NSGNYVLLSNIYASAGRWKDGDKVRDTMRKQGVKKTTGLSWL 642
Score = 164 bits (415), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 106/329 (32%), Positives = 173/329 (52%), Gaps = 47/329 (14%)
Query: 1 MPQRNVASWNAMLCGFVKDGDLSSARGVFDAMPE----KNVVSFTTMIDGYAKAGDMAAA 56
MP R VA WN M+ G+ K G+ A +F M + +NV+++TTMI G+AK G++ A
Sbjct: 160 MPDRTVADWNVMISGYWKCGNEEEASTLFHVMGDQEISRNVITWTTMITGHAKKGNLKTA 219
Query: 57 RFLFEQATEKDVVAWSALISGYVQNGQPNQALKVFLEMESK-NVKPDEFILVSLMSATSQ 115
R F++ E+ VV+W+A++SGY Q G P + +++F +M S NV+PDE V+++S+ S
Sbjct: 220 RMYFDKMPERSVVSWNAMLSGYAQGGAPEETIRLFNDMLSPGNVQPDETTWVTVISSCSS 279
Query: 116 LGHLELAQWVDSYVSK--SSIDLQQDHVI-AALLDMNAKCGNMDRALKLFKE-------- 164
LG L++ S V K ++ + ++ + ALLDM+AKCGN++ A K+F++
Sbjct: 280 LGDPCLSE---SIVRKLDDTVGFRPNYFVKTALLDMHAKCGNLEAAHKIFEQLGVYKYRS 336
Query: 165 --------------------------MPKRDLVSYCSMIQGLSIHGCGEDAVRLFNSML- 197
MP+RD VS+ SMI G + +G A++LF M+
Sbjct: 337 SVPWNAMISAYARVGDLPSARHLFDKMPQRDTVSWNSMIAGYTQNGESVKAIKLFEEMIS 396
Query: 198 MEGLVPDEVAFTIILTACSHSGLVDEGWNYFQSMKQKYGISPSPDHFACMVDLLSRSGHL 257
E PDEV + +AC H G + G N+ S+ ++ I S + ++ + SR G +
Sbjct: 397 SEDSKPDEVTMVSVFSACGHLGELGLG-NWAVSILKENHIQISISVYNSLISMYSRCGSM 455
Query: 258 GDAYELMKSMHEPHAGAWGALLGACKLHG 286
DA + + M ++ L+ HG
Sbjct: 456 QDAVLIFQEMATRDLVSYNTLISGFAEHG 484
Score = 82.4 bits (202), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 65/262 (24%), Positives = 116/262 (44%), Gaps = 44/262 (16%)
Query: 47 YAKAGDMAAARFLFEQATEKDVVAWSALISGYVQNGQPNQALKVFLEMESKNVKPDEFIL 106
YAK G + AR LF++ ++ V W+ +ISGY + G +A +F M + + +
Sbjct: 144 YAKYGPIEFARKLFDEMPDRTVADWNVMISGYWKCGNEEEASTLFHVMGDQEISRNVITW 203
Query: 107 VSLMSATSQLGHLELAQWVDSYVSKSSIDLQQDHVIAALLDMNAKCGNMDRALKLFKEMP 166
++++ GH AK GN+ A F +MP
Sbjct: 204 TTMIT-----GH-------------------------------AKKGNLKTARMYFDKMP 227
Query: 167 KRDLVSYCSMIQGLSIHGCGEDAVRLFNSMLMEGLV-PDEVAFTIILTACSHSGLVDEGW 225
+R +VS+ +M+ G + G E+ +RLFN ML G V PDE + ++++CS G
Sbjct: 228 ERSVVSWNAMLSGYAQGGAPEETIRLFNDMLSPGNVQPDETTWVTVISSCSSLGDPCLSE 287
Query: 226 NYFQSMKQKYGISPSPDHFACMVDLLSRSGHLGDAYELMKSM---HEPHAGAWGALLGAC 282
+ + + G P+ ++D+ ++ G+L A+++ + + + W A++ A
Sbjct: 288 SIVRKLDDTVGFRPNYFVKTALLDMHAKCGNLEAAHKIFEQLGVYKYRSSVPWNAMISAY 347
Query: 283 KLHGDSDLGEIVANQLFELEPQ 304
GD A LF+ PQ
Sbjct: 348 ARVGDLP----SARHLFDKMPQ 365
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 64/248 (25%), Positives = 109/248 (43%), Gaps = 20/248 (8%)
Query: 59 LFEQATEKDVVAWSALISGYVQNGQPNQA-LKVFLEM-ESKNVKPDEFILVSLMSATSQL 116
+F AT DV ++ ++ Y Q G Q + +F M N+KP+ +M +
Sbjct: 58 IFHAATHPDVRVFTFMLKYYSQIGVRAQVPVSLFKHMLRHCNIKPNTSFYSVMMKSAGSE 117
Query: 117 GHLELAQWVDSYVSKSSIDLQQDHVIA-ALLDMNAKCGNMDRALKLFKEMPKRDLVSYCS 175
L LA +V KS D +DH + +L + AK G ++ A KLF EMP R + +
Sbjct: 118 SMLFLA-----HVLKSGYD--RDHYVRNGILGIYAKYGPIEFARKLFDEMPDRTVADWNV 170
Query: 176 MIQGLSIHGCGEDAVRLFNSMLMEGLVPDEVAFTIILTACSHSGLVDEGWNYFQSMKQKY 235
MI G G E+A LF+ M + + + + +T ++T + G + YF M ++
Sbjct: 171 MISGYWKCGNEEEASTLFHVMGDQEISRNVITWTTMITGHAKKGNLKTARMYFDKMPERS 230
Query: 236 GISPSPDHFACMVDLLSRSGHLGDAYELMKSMH-----EPHAGAWGALLGACKLHGDSDL 290
+S + M+ ++ G + L M +P W ++ +C GD L
Sbjct: 231 VVS-----WNAMLSGYAQGGAPEETIRLFNDMLSPGNVQPDETTWVTVISSCSSLGDPCL 285
Query: 291 GEIVANQL 298
E + +L
Sbjct: 286 SESIVRKL 293
>Medtr8g066250.1 | PPR containing plant-like protein | HC |
chr8:27517637-27514893 | 20130731
Length = 728
Score = 280 bits (716), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 136/346 (39%), Positives = 226/346 (65%), Gaps = 5/346 (1%)
Query: 2 PQRNVASWNAMLCGFVKDGDLSSARGVFDAMPEKNVVSFTTMIDGYAKAGDMAAARFLFE 61
P+R+V W+ ++ G+++ ++++AR +FD MP ++ +S+ M++GYA G++ +F+
Sbjct: 203 PERDVVMWSVLISGYIESKNMAAARELFDKMPNRDTMSWNAMLNGYAVNGEVEMFEKVFD 262
Query: 62 QATEKDVVAWSALISGYVQNGQPNQALKVFLEMESK-NVKPDEFILVSLMSATSQLGHLE 120
+ E++V +W+ LI GYV+NG ++ L+ F M + +V P++F LV+++SA S+LG L+
Sbjct: 263 EMPERNVFSWNGLIGGYVKNGLFSETLESFKRMLVEGHVIPNDFTLVAVLSACSRLGALD 322
Query: 121 LAQWVDSYVSKSSIDLQQDHVIA-ALLDMNAKCGNMDRALKLFKEMPKRDLVSYCSMIQG 179
+ +WV Y SI + + + L+DM AKCG ++ A+ +F + ++D++S+ ++I G
Sbjct: 323 MGKWVHVYAE--SIGYKGNLFVGNVLIDMYAKCGVIENAVVVFNCLDRKDIISWNTIING 380
Query: 180 LSIHGCGEDAVRLFNSMLMEGLVPDEVAFTIILTACSHSGLVDEGWNYFQSMKQKYGISP 239
L+IHG DA+ +F+ M EG PD V F IL+AC+H GLV +G+ YF+SM Y I P
Sbjct: 381 LAIHGHAPDALGMFDRMKSEGEEPDGVTFVGILSACTHMGLVKDGFLYFKSMVDHYSIVP 440
Query: 240 SPDHFACMVDLLSRSGHLGDAYELMKSMH-EPHAGAWGALLGACKLHGDSDLGEIVANQL 298
+H+ CMVDLL R+G L A ++ M EP A W ALLGAC+L+ + ++ E+ +L
Sbjct: 441 QIEHYGCMVDLLGRAGLLDQALNFIRKMPIEPDAVIWAALLGACRLYKNVEIAELALQRL 500
Query: 299 FELEPQNAANYILLSNIYAAAERWIDVSLVRSRMRERSVQKIPGCS 344
ELEP N AN++++SNIY R DV+ ++ MR+ +K+PGCS
Sbjct: 501 IELEPNNPANFVMVSNIYKDLGRSEDVARLKIAMRDTGFRKLPGCS 546
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 70/328 (21%), Positives = 141/328 (42%), Gaps = 50/328 (15%)
Query: 1 MPQRNVASWNAMLCGFVKDGDLSSARGVFD------AMP--------------------- 33
+PQ N A+WNAM G++++G +F MP
Sbjct: 70 IPQPNTATWNAMFRGYLQNGHHRDTVVLFGELNRIAGMPNCFTFPMIIKSCGKLEGVREG 129
Query: 34 ------------EKNVVSFTTMIDGYAKAGDMAAARFLFEQATEKDVVAWSALISGYVQN 81
+ N T++ID Y+K G + A +F + E++VV W+A+I+GY+
Sbjct: 130 EEVHCCATKHGFKSNSFVATSLIDMYSKKGCVEDAYKVFGEMHERNVVVWTAIINGYILC 189
Query: 82 GQPNQALKVFLEMESKNVKPDEFILVSLMSATSQLGHLELAQWVDSYVSKSSIDLQQDHV 141
G ++F ++V ++ + + + EL D ++ ++
Sbjct: 190 GDVVSGRRLFDLAPERDVVMWSVLISGYIESKNMAAAREL---FDKMPNRDTMSWN---- 242
Query: 142 IAALLDMNAKCGNMDRALKLFKEMPKRDLVSYCSMIQGLSIHGCGEDAVRLFNSMLMEG- 200
A+L+ A G ++ K+F EMP+R++ S+ +I G +G + + F ML+EG
Sbjct: 243 --AMLNGYAVNGEVEMFEKVFDEMPERNVFSWNGLIGGYVKNGLFSETLESFKRMLVEGH 300
Query: 201 LVPDEVAFTIILTACSHSGLVDEGWNYFQSMKQKYGISPSPDHFACMVDLLSRSGHLGDA 260
++P++ +L+ACS G +D G + + G + ++D+ ++ G + +A
Sbjct: 301 VIPNDFTLVAVLSACSRLGALDMG-KWVHVYAESIGYKGNLFVGNVLIDMYAKCGVIENA 359
Query: 261 YELMKSMHEPHAGAWGALLGACKLHGDS 288
+ + +W ++ +HG +
Sbjct: 360 VVVFNCLDRKDIISWNTIINGLAIHGHA 387
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 52/228 (22%), Positives = 104/228 (45%), Gaps = 14/228 (6%)
Query: 56 ARFLFEQATEKDVVAWSALISGYVQNGQPNQALKVFLEMESKNVKPDEFILVSLMSATSQ 115
AR LF++ + + W+A+ GY+QNG + +F E+ P+ F ++ + +
Sbjct: 63 ARKLFDKIPQPNTATWNAMFRGYLQNGHHRDTVVLFGELNRIAGMPNCFTFPMIIKSCGK 122
Query: 116 LGHLELAQWVDSYVSKSSIDLQQDHVIAALLDMNAKCGNMDRALKLFKEMPKRDLVSYCS 175
L + + V +K V +L+DM +K G ++ A K+F EM +R++V + +
Sbjct: 123 LEGVREGEEVHCCATKHGFK-SNSFVATSLIDMYSKKGCVEDAYKVFGEMHERNVVVWTA 181
Query: 176 MIQGLSIHGCGEDAVRLFNSMLMEGLVP--DEVAFTIILTACSHSGLVDEGWNYFQSMKQ 233
+I G + G RLF+ L P D V ++++++ S + F M
Sbjct: 182 IINGYILCGDVVSGRRLFD------LAPERDVVMWSVLISGYIESKNMAAARELFDKMPN 235
Query: 234 KYGISPSPDHFACMVDLLSRSGHLGDAYELMKSMHEPHAGAWGALLGA 281
+ +S + M++ + +G + ++ M E + +W L+G
Sbjct: 236 RDTMS-----WNAMLNGYAVNGEVEMFEKVFDEMPERNVFSWNGLIGG 278
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 47/192 (24%), Positives = 84/192 (43%), Gaps = 13/192 (6%)
Query: 137 QQDHVIAALLDMNAKCGNMDRALKLFKEMPKRDLVSYCSMIQGLSIHGCGEDAVRLFNSM 196
D V + ++ + A KLF ++P+ + ++ +M +G +G D V LF +
Sbjct: 42 HNDFVAPNFITTCSRFKRIHHARKLFDKIPQPNTATWNAMFRGYLQNGHHRDTVVLFGEL 101
Query: 197 LMEGLVPDEVAFTIILTACSHSGLVDEGWNYFQSMKQKYGISPSPDHFACMVDLLSRSGH 256
+P+ F +I+ +C V EG K+G + ++D+ S+ G
Sbjct: 102 NRIAGMPNCFTFPMIIKSCGKLEGVREG-EEVHCCATKHGFKSNSFVATSLIDMYSKKGC 160
Query: 257 LGDAYELMKSMHEPHAGAWGALLGACKLHGDSDLGEIVANQLFELEPQN--------AAN 308
+ DAY++ MHE + W A++ L GD + +LF+L P+ +
Sbjct: 161 VEDAYKVFGEMHERNVVVWTAIINGYILCGDV----VSGRRLFDLAPERDVVMWSVLISG 216
Query: 309 YILLSNIYAAAE 320
YI N+ AA E
Sbjct: 217 YIESKNMAAARE 228
>Medtr8g027150.1 | PPR containing plant-like protein | HC |
chr8:9538952-9542067 | 20130731
Length = 506
Score = 280 bits (715), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 146/345 (42%), Positives = 218/345 (63%), Gaps = 4/345 (1%)
Query: 3 QRNVASWNAMLCGFVKDGDLSSARGVFDAMPEKNVVSFTTMIDGYAKAGDMAAARFLFEQ 62
+ +V + A+L + K G L AR VFD M K + ++ M+ G + GDM A LF
Sbjct: 111 KHDVFASTALLDMYAKLGCLKFARNVFDEMSVKELATWNAMMAGCTRFGDMERALELFWL 170
Query: 63 ATEKDVVAWSALISGYVQNGQPNQALKVFLEME-SKNVKPDEFILVSLMSATSQLGHLEL 121
++VV+W+ ++SGY+QN Q +AL +F+ ME K+V P+E L S++ A + LG LE+
Sbjct: 171 MPSRNVVSWTTMVSGYLQNKQYEKALGLFMRMEREKDVSPNEVTLASVLPACANLGALEI 230
Query: 122 AQWVDSYVSKSSIDLQQDHVIAALLDMNAKCGNMDRALKLFKEMPK-RDLVSYCSMIQGL 180
Q V+ Y K+ + V A+L+M AKCG +D A K+F E+ + R+L S+ SMI GL
Sbjct: 231 GQRVEVYARKNGF-FKNLFVCNAVLEMYAKCGKIDVAWKVFDEIGRFRNLCSWNSMIMGL 289
Query: 181 SIHGCGEDAVRLFNSMLMEGLVPDEVAFTIILTACSHSGLVDEGWNYFQSMKQKYGISPS 240
++HG A++L++ ML EG +PD+V F +L AC+H G+V++G + FQSM + + I P
Sbjct: 290 AVHGQCHKAIQLYDQMLREGTLPDDVTFVGLLLACTHGGMVEKGKHVFQSMTRDFNIIPK 349
Query: 241 PDHFACMVDLLSRSGHLGDAYELMKSM-HEPHAGAWGALLGACKLHGDSDLGEIVANQLF 299
+H+ CMVDLL R+G L +AYE++K M +P + WG LLGAC HG+ +L E+ A LF
Sbjct: 350 LEHYGCMVDLLGRAGRLTEAYEVIKRMPMKPDSVIWGTLLGACSFHGNVELAEVAAESLF 409
Query: 300 ELEPQNAANYILLSNIYAAAERWIDVSLVRSRMRERSVQKIPGCS 344
LEP N NY++LSNIYA+A +W V+ +R M+ + K G S
Sbjct: 410 VLEPWNPGNYVILSNIYASAGKWDGVAKLRKVMKGSKITKTAGQS 454
>Medtr4g098940.1 | PPR containing plant-like protein | HC |
chr4:40871758-40869320 | 20130731
Length = 575
Score = 279 bits (714), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 149/345 (43%), Positives = 219/345 (63%), Gaps = 8/345 (2%)
Query: 1 MPQRNVASWNAMLCGFVKDGDLSSARGVFDAMPEKNVVSFTTMIDGYAKAGDMAAARFLF 60
M +R+V SWN M+ G+V GDL++A+ +F+AMP K+VVS+ MIDG + G+++ A F
Sbjct: 212 MYERDVFSWNCMIAGYVSVGDLAAAKELFEAMPNKDVVSWNCMIDGCVRVGNVSLALEFF 271
Query: 61 EQ---ATEKDVVAWSALISGYVQNGQPNQALKVFLEM-ESKNVKPDEFILVSLMSATSQL 116
Q ++VV+W++L++ +V+ + L++F M ES P+E LVS+++A + L
Sbjct: 272 NQMDGVVVRNVVSWNSLLALHVRMKNYGECLRMFERMMESGEAMPNEATLVSVLTACANL 331
Query: 117 GHLELAQWVDSYVSKSSIDLQQDHVI-AALLDMNAKCGNMDRALKLFKEMPKRDLVSYCS 175
G L L WV SY+ + I L D ++ LL M AKCG MD A +F EMP + +VS+ S
Sbjct: 332 GKLNLGLWVHSYIKSNEIKL--DVLLETCLLTMYAKCGAMDLASDVFVEMPVKSIVSWNS 389
Query: 176 MIQGLSIHGCGEDAVRLFNSMLMEGLVPDEVAFTIILTACSHSGLVDEGWNYFQSMKQKY 235
MI G +HG G+ A+ +F M G P+E F +L+ACSH+G+V EGW YF M++ Y
Sbjct: 390 MIMGYGLHGNGDKALEMFAEMEKAGQKPNEATFICVLSACSHAGMVMEGWWYFDLMRRVY 449
Query: 236 GISPSPDHFACMVDLLSRSGHLGDAYELMKSMHEPHAGA-WGALLGACKLHGDSDLGEIV 294
I P +H+ CMVDLL+R+G + ++ EL++ + A WGALL C+ H D +L E V
Sbjct: 450 KIEPKVEHYGCMVDLLARAGFVKNSEELIEKVSVKGGSAMWGALLSGCRTHLDLELAENV 509
Query: 295 ANQLFELEPQNAANYILLSNIYAAAERWIDVSLVRSRMRERSVQK 339
A +L ELEPQ+ + YILLS++YAA RW DV VR M+ +QK
Sbjct: 510 AKRLVELEPQDISPYILLSDVYAAQGRWDDVERVRLAMKINGLQK 554
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 72/288 (25%), Positives = 133/288 (46%), Gaps = 53/288 (18%)
Query: 10 NAMLCGFVKDGDLSSARGVFDAMPEKNVVSFTTMIDGYAKAGDMAAARFLFEQATEKDVV 69
N+++ + G + AR +F ++VS+ TMIDGY K G + AR LF++ E+DV
Sbjct: 159 NSLIRMYSVFGRIDDARLIFYESYVLDLVSYNTMIDGYVKNGGIRDARKLFDEMYERDVF 218
Query: 70 AWSALISGYVQNGQPNQALKVFLEMESKNVKPDEFILVSLMSATSQLGHLELAQWVDSYV 129
+W+ +I+GYV G A ++F M +K+V W
Sbjct: 219 SWNCMIAGYVSVGDLAAAKELFEAMPNKDV----------------------VSW----- 251
Query: 130 SKSSIDLQQDHVIAALLDMNAKCGNMDRALKLFKEMPK---RDLVSYCSMIQ-GLSIHGC 185
++D + GN+ AL+ F +M R++VS+ S++ + +
Sbjct: 252 -------------NCMIDGCVRVGNVSLALEFFNQMDGVVVRNVVSWNSLLALHVRMKNY 298
Query: 186 GEDAVRLFNSMLMEG-LVPDEVAFTIILTACSHSGLVDEG-W--NYFQSMKQKYGISPSP 241
GE +R+F M+ G +P+E +LTAC++ G ++ G W +Y +S + K +
Sbjct: 299 GE-CLRMFERMMESGEAMPNEATLVSVLTACANLGKLNLGLWVHSYIKSNEIKLDVLLE- 356
Query: 242 DHFACMVDLLSRSGHLGDAYELMKSMHEPHAGAWGALLGACKLHGDSD 289
C++ + ++ G + A ++ M +W +++ LHG+ D
Sbjct: 357 ---TCLLTMYAKCGAMDLASDVFVEMPVKSIVSWNSMIMGYGLHGNGD 401
>Medtr6g093170.1 | PPR containing protein | HC |
chr6:35177726-35180122 | 20130731
Length = 608
Score = 278 bits (712), Expect = 5e-75, Method: Compositional matrix adjust.
Identities = 139/342 (40%), Positives = 233/342 (68%), Gaps = 7/342 (2%)
Query: 10 NAMLCGFVKDGDLSSARGVFDAMPEKNVVSFTTMIDGYAKAGDMAAARFLFEQATEKDVV 69
NA+L + K G +S AR +FD M EKNV +T+M+ GY G++ AR LF+++ +DVV
Sbjct: 244 NALLDMYCKCGYVSVAREIFDGMIEKNVNCWTSMVTGYVSCGELDKARDLFDKSPTRDVV 303
Query: 70 AWSALISGYVQNGQPNQALKVFLEMESKNVKPDEFILVSLMSATSQLGHLELAQWVDSYV 129
W+A+I+GYVQ + ++A+ +F EM+ + VKPD+FI+V+L++ +QLG LE +W+ YV
Sbjct: 304 LWTAMINGYVQFNRFDEAVALFEEMQVRGVKPDKFIVVALLTCCAQLGTLEHGRWIHDYV 363
Query: 130 SKSSIDLQQDHVI-AALLDMNAKCGNMDRALKLFKEMPKRDLVSYCSMIQGLSIHGCGED 188
++ I + D V+ +L++M AKCG ++++L++F + ++D S+ S+I GL+++G +
Sbjct: 364 RENRIVV--DAVVGTSLIEMYAKCGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTIE 421
Query: 189 AVRLFNSMLMEGLVPDEVAFTIILTACSHSGLVDEGWNYFQSMKQKYGISPSPDHFACMV 248
A+ LF M + G PD+V F ++L ACSH GLV+EG F SM YGI P+ +H+ C +
Sbjct: 422 ALELFEEMKIFGAKPDDVTFIVLLNACSHGGLVEEGHKLFHSMSCIYGIEPNLEHYGCFI 481
Query: 249 DLLSRSGHLGDAYELMKSM----HEPHAGAWGALLGACKLHGDSDLGEIVANQLFELEPQ 304
DLL R+G L +A EL+K + +E +G+ L AC+ +G++D+GE +A L +++
Sbjct: 482 DLLGRAGLLHEAEELIKKLPDQKNETIVAIYGSFLSACRTYGNTDMGERIATALEKVKSS 541
Query: 305 NAANYILLSNIYAAAERWIDVSLVRSRMRERSVQKIPGCSKL 346
+++ + LL++IYA+A+RW D S RS+M++ ++K+PGCS +
Sbjct: 542 DSSLHSLLASIYASADRWEDASKTRSKMKDLHIRKVPGCSAI 583
Score = 96.3 bits (238), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 70/291 (24%), Positives = 136/291 (46%), Gaps = 38/291 (13%)
Query: 42 TMIDGYAKAGDMAAARFLFEQATEKDVVAWSALISGYVQNGQPNQALKVFLEME-SKNVK 100
+ +D YA+ G + R LF++ +E+D V+W+ +ISG V+ + +A++VF M N K
Sbjct: 143 SFMDMYAELGRIDFVRKLFDEISERDSVSWNVMISGCVKCRRFEEAVEVFQRMRVDSNEK 202
Query: 101 PDEFILVSLMSATSQLGHLELAQWVDSYVSKSSIDLQQDHVIAALLDMNAK--------- 151
E +VS ++A + ++E+ + + ++ + +D + ALLDM K
Sbjct: 203 ISEATVVSSLTACAASRNVEVGKEIHGFIIEKELDFTM-RMGNALLDMYCKCGYVSVARE 261
Query: 152 ----------------------CGNMDRALKLFKEMPKRDLVSYCSMIQGLSIHGCGEDA 189
CG +D+A LF + P RD+V + +MI G ++A
Sbjct: 262 IFDGMIEKNVNCWTSMVTGYVSCGELDKARDLFDKSPTRDVVLWTAMINGYVQFNRFDEA 321
Query: 190 VRLFNSMLMEGLVPDEVAFTIILTACSHSGLVDEGWNYFQSMKQKYGISPSPDHFACMVD 249
V LF M + G+ PD+ +LT C+ G ++ G + ++ I +++
Sbjct: 322 VALFEEMQVRGVKPDKFIVVALLTCCAQLGTLEHG-RWIHDYVRENRIVVDAVVGTSLIE 380
Query: 250 LLSRSGHLGDAYELMKSMHEPHAGAWGALLGACKLHGDSDLGEIVANQLFE 300
+ ++ G + + E+ + E +W +++ ++G + I A +LFE
Sbjct: 381 MYAKCGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKT----IEALELFE 427
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 60/282 (21%), Positives = 121/282 (42%), Gaps = 8/282 (2%)
Query: 59 LFEQATEKDVVAWSALISGYVQNGQPNQALKVFLEMESKNVKPDEFILVSLMSATSQLGH 118
+F + ++ LI + + + +F ++ + PD + ++ A + +
Sbjct: 59 IFNHTLHPSLFLYNLLIKSFFKRNSFQTLISLFNQLRLNGLYPDNYTYPFVLKAVAFIAD 118
Query: 119 LELAQWVDSYVSKSSIDLQQDHVIAALLDMNAKCGNMDRALKLFKEMPKRDLVSYCSMIQ 178
+ ++V K+ +D +V + +DM A+ G +D KLF E+ +RD VS+ MI
Sbjct: 119 FRQGTKIHAFVFKTGLD-SDYYVSNSFMDMYAELGRIDFVRKLFDEISERDSVSWNVMIS 177
Query: 179 GLSIHGCGEDAVRLFNSMLMEGLVP-DEVAFTIILTACSHSGLVDEGWNYFQSMKQKYGI 237
G E+AV +F M ++ E LTAC+ S V+ G + +K +
Sbjct: 178 GCVKCRRFEEAVEVFQRMRVDSNEKISEATVVSSLTACAASRNVEVGKEIHGFIIEK-EL 236
Query: 238 SPSPDHFACMVDLLSRSGHLGDAYELMKSMHEPHAGAWGALLGACKLHGDSDLGEIVANQ 297
+ ++D+ + G++ A E+ M E + W +++ G+ D A
Sbjct: 237 DFTMRMGNALLDMYCKCGYVSVAREIFDGMIEKNVNCWTSMVTGYVSCGELD----KARD 292
Query: 298 LFELEP-QNAANYILLSNIYAAAERWIDVSLVRSRMRERSVQ 338
LF+ P ++ + + N Y R+ + + M+ R V+
Sbjct: 293 LFDKSPTRDVVLWTAMINGYVQFNRFDEAVALFEEMQVRGVK 334
>Medtr3g109380.2 | PPR containing plant-like protein | HC |
chr3:50595856-50594240 | 20130731
Length = 538
Score = 278 bits (711), Expect = 6e-75, Method: Compositional matrix adjust.
Identities = 132/338 (39%), Positives = 215/338 (63%), Gaps = 2/338 (0%)
Query: 10 NAMLCGFVKDGDLSSARGVFDAMPEKNVVSFTTMIDGYAKAGDMAAARFLFEQATEKDVV 69
NA++ + K GDL++A VF+ M ++V+S+ ++I GY K G M +AR LF+ + +V
Sbjct: 150 NALIDMYTKFGDLTNACKVFEEMSHRDVISWNSLIFGYVKLGQMNSARELFDDMPVRTIV 209
Query: 70 AWSALISGYVQNGQPNQALKVFLEMESKNVKPDEFILVSLMSATSQLGHLELAQWVDSYV 129
+W+ +I+GY + G AL VF EM+ ++PDE +++++ A +QLG LE+ +W+ Y
Sbjct: 210 SWTTMITGYGRMGCYGDALDVFREMQMVGIEPDEISIIAVLPACAQLGALEVGKWIHMYA 269
Query: 130 SKSSIDLQQDHVIAALLDMNAKCGNMDRALKLFKEMPKRDLVSYCSMIQGLSIHGCGEDA 189
K+ L++ + AL++M AKCG +D A LF ++ ++D++S+ +MI GL+ HG G +A
Sbjct: 270 DKNGF-LRKTGICNALIEMYAKCGCIDEAWNLFDQLVEKDVISWSTMIGGLANHGKGYEA 328
Query: 190 VRLFNSMLMEGLVPDEVAFTIILTACSHSGLVDEGWNYFQSMKQKYGISPSPDHFACMVD 249
++LF M + P+E+ F +L ACSH+GL DEG YF M Y I P +H+ C++D
Sbjct: 329 IQLFEEMCKVRVAPNEITFLGVLLACSHTGLWDEGLKYFDVMSASYHIEPEIEHYGCLID 388
Query: 250 LLSRSGHLGDAYELMKSMH-EPHAGAWGALLGACKLHGDSDLGEIVANQLFELEPQNAAN 308
LL RSG LG A + + M +P + W +LL +C++H + + I QL ELEP+ + N
Sbjct: 389 LLGRSGCLGQALDTISKMPIKPDSRIWNSLLSSCRIHRNLQIAVIAVKQLMELEPEESGN 448
Query: 309 YILLSNIYAAAERWIDVSLVRSRMRERSVQKIPGCSKL 346
Y+LL+N+YA +W DVS +R +R + ++K PG S +
Sbjct: 449 YVLLANMYAEHGKWEDVSNIRKLIRNKRIKKTPGSSSI 486
Score = 100 bits (250), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 80/297 (26%), Positives = 128/297 (43%), Gaps = 46/297 (15%)
Query: 41 TTMIDGYAKAGDMAAARFLFEQATEKDVVAWSALISGYVQNGQPNQALKVFLEM---ESK 97
T M+D G ++ A LF+Q ++ ++A+I Y N + A+ VF++M +
Sbjct: 46 TKMLDSCDNLGHVSYATLLFKQLLHPNIFTYNAIIRTYAHNRHHSSAISVFVQMLTHSTN 105
Query: 98 NVKPDEFIL-VSLMSATSQLGHLELAQWVDSYVSKSSIDLQQDHVIA--ALLDMNAKCGN 154
+V PD+F + S T L H L V V K D H I AL+DM K G+
Sbjct: 106 SVFPDKFTFPFVIKSCTGILCH-RLGMQVHGLVYKFGADF---HCITENALIDMYTKFGD 161
Query: 155 MDRALKLFKE-------------------------------MPKRDLVSYCSMIQGLSIH 183
+ A K+F+E MP R +VS+ +MI G
Sbjct: 162 LTNACKVFEEMSHRDVISWNSLIFGYVKLGQMNSARELFDDMPVRTIVSWTTMITGYGRM 221
Query: 184 GCGEDAVRLFNSMLMEGLVPDEVAFTIILTACSHSGLVDEGWNYFQSMKQKYGISPSPDH 243
GC DA+ +F M M G+ PDE++ +L AC+ G ++ G + K G
Sbjct: 222 GCYGDALDVFREMQMVGIEPDEISIIAVLPACAQLGALEVG-KWIHMYADKNGFLRKTGI 280
Query: 244 FACMVDLLSRSGHLGDAYELMKSMHEPHAGAWGALLGACKLHGDSDLGEIVANQLFE 300
++++ ++ G + +A+ L + E +W ++G HG A QLFE
Sbjct: 281 CNALIEMYAKCGCIDEAWNLFDQLVEKDVISWSTMIGGLANHGKG----YEAIQLFE 333
>Medtr3g109380.1 | PPR containing plant-like protein | HC |
chr3:50595856-50594240 | 20130731
Length = 538
Score = 278 bits (711), Expect = 6e-75, Method: Compositional matrix adjust.
Identities = 132/338 (39%), Positives = 215/338 (63%), Gaps = 2/338 (0%)
Query: 10 NAMLCGFVKDGDLSSARGVFDAMPEKNVVSFTTMIDGYAKAGDMAAARFLFEQATEKDVV 69
NA++ + K GDL++A VF+ M ++V+S+ ++I GY K G M +AR LF+ + +V
Sbjct: 150 NALIDMYTKFGDLTNACKVFEEMSHRDVISWNSLIFGYVKLGQMNSARELFDDMPVRTIV 209
Query: 70 AWSALISGYVQNGQPNQALKVFLEMESKNVKPDEFILVSLMSATSQLGHLELAQWVDSYV 129
+W+ +I+GY + G AL VF EM+ ++PDE +++++ A +QLG LE+ +W+ Y
Sbjct: 210 SWTTMITGYGRMGCYGDALDVFREMQMVGIEPDEISIIAVLPACAQLGALEVGKWIHMYA 269
Query: 130 SKSSIDLQQDHVIAALLDMNAKCGNMDRALKLFKEMPKRDLVSYCSMIQGLSIHGCGEDA 189
K+ L++ + AL++M AKCG +D A LF ++ ++D++S+ +MI GL+ HG G +A
Sbjct: 270 DKNGF-LRKTGICNALIEMYAKCGCIDEAWNLFDQLVEKDVISWSTMIGGLANHGKGYEA 328
Query: 190 VRLFNSMLMEGLVPDEVAFTIILTACSHSGLVDEGWNYFQSMKQKYGISPSPDHFACMVD 249
++LF M + P+E+ F +L ACSH+GL DEG YF M Y I P +H+ C++D
Sbjct: 329 IQLFEEMCKVRVAPNEITFLGVLLACSHTGLWDEGLKYFDVMSASYHIEPEIEHYGCLID 388
Query: 250 LLSRSGHLGDAYELMKSMH-EPHAGAWGALLGACKLHGDSDLGEIVANQLFELEPQNAAN 308
LL RSG LG A + + M +P + W +LL +C++H + + I QL ELEP+ + N
Sbjct: 389 LLGRSGCLGQALDTISKMPIKPDSRIWNSLLSSCRIHRNLQIAVIAVKQLMELEPEESGN 448
Query: 309 YILLSNIYAAAERWIDVSLVRSRMRERSVQKIPGCSKL 346
Y+LL+N+YA +W DVS +R +R + ++K PG S +
Sbjct: 449 YVLLANMYAEHGKWEDVSNIRKLIRNKRIKKTPGSSSI 486
Score = 100 bits (250), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 80/297 (26%), Positives = 128/297 (43%), Gaps = 46/297 (15%)
Query: 41 TTMIDGYAKAGDMAAARFLFEQATEKDVVAWSALISGYVQNGQPNQALKVFLEM---ESK 97
T M+D G ++ A LF+Q ++ ++A+I Y N + A+ VF++M +
Sbjct: 46 TKMLDSCDNLGHVSYATLLFKQLLHPNIFTYNAIIRTYAHNRHHSSAISVFVQMLTHSTN 105
Query: 98 NVKPDEFIL-VSLMSATSQLGHLELAQWVDSYVSKSSIDLQQDHVIA--ALLDMNAKCGN 154
+V PD+F + S T L H L V V K D H I AL+DM K G+
Sbjct: 106 SVFPDKFTFPFVIKSCTGILCH-RLGMQVHGLVYKFGADF---HCITENALIDMYTKFGD 161
Query: 155 MDRALKLFKE-------------------------------MPKRDLVSYCSMIQGLSIH 183
+ A K+F+E MP R +VS+ +MI G
Sbjct: 162 LTNACKVFEEMSHRDVISWNSLIFGYVKLGQMNSARELFDDMPVRTIVSWTTMITGYGRM 221
Query: 184 GCGEDAVRLFNSMLMEGLVPDEVAFTIILTACSHSGLVDEGWNYFQSMKQKYGISPSPDH 243
GC DA+ +F M M G+ PDE++ +L AC+ G ++ G + K G
Sbjct: 222 GCYGDALDVFREMQMVGIEPDEISIIAVLPACAQLGALEVG-KWIHMYADKNGFLRKTGI 280
Query: 244 FACMVDLLSRSGHLGDAYELMKSMHEPHAGAWGALLGACKLHGDSDLGEIVANQLFE 300
++++ ++ G + +A+ L + E +W ++G HG A QLFE
Sbjct: 281 CNALIEMYAKCGCIDEAWNLFDQLVEKDVISWSTMIGGLANHGKG----YEAIQLFE 333
>Medtr1g040000.1 | PPR containing plant-like protein | HC |
chr1:14632880-14635263 | 20130731
Length = 526
Score = 278 bits (711), Expect = 6e-75, Method: Compositional matrix adjust.
Identities = 142/328 (43%), Positives = 212/328 (64%), Gaps = 6/328 (1%)
Query: 21 DLSSARGVFDAMPEKNVVSFTTMIDGYAKAGDMAAARFLFEQATE--KDVVAWSALISGY 78
D+ SAR +FD V MI Y K GD++ AR LF+ E KDV +W+A+ISGY
Sbjct: 161 DVCSARKLFDEFGGNGCV-LNAMIVAYVKVGDVSNARKLFDSMLERDKDVFSWTAMISGY 219
Query: 79 VQNGQPNQALKVFLEMESKNVKPDEFILVSLMSATSQLGHLELAQWVDSYVSKSSIDLQQ 138
Q PN+A+K+F M+ +NVKPDE +++++SA + LG L L +W+ +Y+ K + +
Sbjct: 220 TQAHNPNEAIKLFRRMQLENVKPDEIAILAVLSACADLGALHLGEWIHNYIEKHKLS-KI 278
Query: 139 DHVIAALLDMNAKCGNMDRALKLFKEMPKRDLVSYCSMIQGLSIHGCGEDAVRLFNSMLM 198
+ +L+DM AK GN+ +AL+LF+ M + ++++ +MI GL++HG G++A+R+F+ M
Sbjct: 279 VPLYNSLIDMYAKSGNIRKALELFENMKHKTIITWTTMIAGLALHGLGKEALRVFSCMEK 338
Query: 199 EGLV-PDEVAFTIILTACSHSGLVDEGWNYFQSMKQKYGISPSPDHFACMVDLLSRSGHL 257
E V P+EV F IL+ACSH GLV+ G +YF SM+ +YGI P +H+ CM+DLL R+GHL
Sbjct: 339 EDRVKPNEVTFIAILSACSHVGLVELGRDYFTSMRSRYGIEPKIEHYGCMIDLLGRAGHL 398
Query: 258 GDAYELMKSM-HEPHAGAWGALLGACKLHGDSDLGEIVANQLFELEPQNAANYILLSNIY 316
+A E++ M E +A WG+LL A GD++L E L LEP + NY LLSN Y
Sbjct: 399 QEAKEMVLRMPFEANAAIWGSLLAASTRCGDAELAEEALRHLTVLEPGHCGNYSLLSNTY 458
Query: 317 AAAERWIDVSLVRSRMRERSVQKIPGCS 344
A+ RW + +VR M++ V+K+PG S
Sbjct: 459 ASLGRWNESRMVRKVMQDAGVEKVPGVS 486
>Medtr2g094430.1 | pentatricopeptide (PPR) repeat protein | HC |
chr2:40268645-40272453 | 20130731
Length = 678
Score = 278 bits (710), Expect = 7e-75, Method: Compositional matrix adjust.
Identities = 144/384 (37%), Positives = 220/384 (57%), Gaps = 41/384 (10%)
Query: 1 MPQRNVASWNAMLCGFV-----------------------------------KDGDLSSA 25
M +NV SW M+CG + + GDL S
Sbjct: 165 MVVKNVVSWTGMICGCIEFGKFREAVDLFRGLLESGLRPDGFVIVRVLRACARLGDLESG 224
Query: 26 RGVFDAMPE----KNVVSFTTMIDGYAKAGDMAAARFLFEQATEKDVVAWSALISGYVQN 81
R + M E +NV T+++D Y K G M ARF+F+ EKD+V WSA+I GY N
Sbjct: 225 RWIDRCMRECGLSRNVFVATSLVDMYTKCGSMEEARFVFDGMVEKDIVCWSAMIQGYASN 284
Query: 82 GQPNQALKVFLEMESKNVKPDEFILVSLMSATSQLGHLELAQWVDSYVSKSSIDLQQDHV 141
G P +A+++F EM NV+PD + +V +S+ + LG LEL W ++ L +
Sbjct: 285 GLPREAIELFFEMRKVNVRPDCYAMVGALSSCASLGALELGNWAKGLMNYEEF-LSNPVL 343
Query: 142 IAALLDMNAKCGNMDRALKLFKEMPKRDLVSYCSMIQGLSIHGCGEDAVRLFNSMLMEGL 201
+L+D AKCG+M+ AL ++K M ++D V + ++I GL+++G A +F M G+
Sbjct: 344 GTSLIDFYAKCGSMEEALGVYKMMKEKDRVVFNAVISGLAMYGQVGAAFGVFGQMGKFGI 403
Query: 202 VPDEVAFTIILTACSHSGLVDEGWNYFQSMKQKYGISPSPDHFACMVDLLSRSGHLGDAY 261
P+E F +L C+H+GLVD+G +YF SM + ++P+ +H+ CMVDLL+R+G L +A+
Sbjct: 404 PPNEHTFVGLLCGCTHAGLVDDGRHYFNSMSHDFSVTPTIEHYGCMVDLLARAGFLDEAH 463
Query: 262 ELMKSM-HEPHAGAWGALLGACKLHGDSDLGEIVANQLFELEPQNAANYILLSNIYAAAE 320
L+K M + + WG+LLG C+LH ++ L E V QL ELEP N+ +Y+LLSNIY+A+
Sbjct: 464 NLIKGMPMKANVIVWGSLLGGCRLHRETQLAEHVLKQLIELEPWNSGHYVLLSNIYSASR 523
Query: 321 RWIDVSLVRSRMRERSVQKIPGCS 344
RW + +RS + E+ +QK+PG S
Sbjct: 524 RWDEAEKIRSTVNEKGMQKLPGYS 547
Score = 117 bits (293), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 69/257 (26%), Positives = 135/257 (52%), Gaps = 8/257 (3%)
Query: 30 DAMPEKNVVSFTTMIDGYAKAGDMAAARFLFEQATEKDVVAWSALISGYVQNGQPNQALK 89
D + NVV F Y+K G + A +F+ K+VV+W+ +I G ++ G+ +A+
Sbjct: 138 DVFVKTNVVCF------YSKCGFLRDAWKVFDDMVVKNVVSWTGMICGCIEFGKFREAVD 191
Query: 90 VFLEMESKNVKPDEFILVSLMSATSQLGHLELAQWVDSYVSKSSIDLQQDHVIAALLDMN 149
+F + ++PD F++V ++ A ++LG LE +W+D + + + + V +L+DM
Sbjct: 192 LFRGLLESGLRPDGFVIVRVLRACARLGDLESGRWIDRCMRECGLS-RNVFVATSLVDMY 250
Query: 150 AKCGNMDRALKLFKEMPKRDLVSYCSMIQGLSIHGCGEDAVRLFNSMLMEGLVPDEVAFT 209
KCG+M+ A +F M ++D+V + +MIQG + +G +A+ LF M + PD A
Sbjct: 251 TKCGSMEEARFVFDGMVEKDIVCWSAMIQGYASNGLPREAIELFFEMRKVNVRPDCYAMV 310
Query: 210 IILTACSHSGLVDEGWNYFQSMKQKYGISPSPDHFACMVDLLSRSGHLGDAYELMKSMHE 269
L++C+ G ++ G N+ + + +P ++D ++ G + +A + K M E
Sbjct: 311 GALSSCASLGALELG-NWAKGLMNYEEFLSNPVLGTSLIDFYAKCGSMEEALGVYKMMKE 369
Query: 270 PHAGAWGALLGACKLHG 286
+ A++ ++G
Sbjct: 370 KDRVVFNAVISGLAMYG 386
>Medtr7g078360.1 | PPR containing plant-like protein | HC |
chr7:29634869-29632890 | 20130731
Length = 632
Score = 276 bits (706), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 143/343 (41%), Positives = 221/343 (64%), Gaps = 12/343 (3%)
Query: 10 NAMLCGFVKDGDLSSARGVFDAM---PEKNVVSFTTMIDGYAKAGDMAAARFLFEQATEK 66
A+L K G+L +A +F+ + ++ V + MI YA+ GD+ +A+ LF++ ++
Sbjct: 292 TALLDMHAKCGNLEAAHKIFEQLGVYKYRSSVPWNAMISAYARVGDLPSAKHLFDKMPQR 351
Query: 67 DVVAWSALISGYVQNGQPNQALKVFLEMESK--NVKPDEFILVSLMSATSQLGHLELAQW 124
D V+W+++I+GY QNG+ +A+K+F EM S + KPDE +VS+ SA LG L L W
Sbjct: 352 DTVSWNSMIAGYTQNGESFKAIKLFEEMISSEDSRKPDEVTMVSVFSACGHLGELGLGNW 411
Query: 125 VDSYVSKSSIDLQQDHVIAALLDMNAKCGNMDRALKLFKEMPKRDLVSYCSMIQGLSIHG 184
S + + I + V +L++M ++CG+M A+ +F+EM RDLVSY ++I G + HG
Sbjct: 412 AVSILKVNHIQISIS-VYNSLINMYSRCGSMQDAVLIFQEMATRDLVSYNTLISGFAEHG 470
Query: 185 CGEDAVRLFNSMLMEGLVPDEVAFTIILTACSHSGLVDEGWNYFQSMKQKYGISPSPDHF 244
G +++ L + M +G+ PD + + ILTACSH+GL+DEG F+S+K P DH+
Sbjct: 471 HGMESIELLSKMKEDGIEPDRITYIAILTACSHAGLLDEGQRLFESIK-----FPDVDHY 525
Query: 245 ACMVDLLSRSGHLGDAYELMKSM-HEPHAGAWGALLGACKLHGDSDLGEIVANQLFELEP 303
ACM+D+L R+G L +A +L++SM EPHAG +G+LL A +H +LGE+ A +LF++EP
Sbjct: 526 ACMIDMLGRAGRLEEAMKLIQSMPMEPHAGIYGSLLNATSIHKQVELGELAAAKLFKVEP 585
Query: 304 QNAANYILLSNIYAAAERWIDVSLVRSRMRERSVQKIPGCSKL 346
N+ NY LLSNIYA+A RW + VR MR++ V+K G S L
Sbjct: 586 HNSGNYALLSNIYASAGRWKEGDKVRDTMRKQGVKKTTGLSWL 628
Score = 159 bits (402), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 104/330 (31%), Positives = 171/330 (51%), Gaps = 48/330 (14%)
Query: 1 MPQRNVASWNAMLCGFVKDGDLSSARGVFDAMPE----KNVVSFTTMIDGYAKAGDMAAA 56
MP R VA WN M+ G+ K G+ A +F M + +NV+++TTMI G+AK G++ A
Sbjct: 145 MPDRTVADWNVMISGYWKCGNEEEASTLFHVMGDQEISRNVITWTTMITGHAKKGNLKTA 204
Query: 57 RFLFEQATEKDVVAWSALISGYVQNGQPNQALKVFLEMESK-NVKPDEFILVSLMSATSQ 115
R F++ E+ VV+W+A++SGY Q G P + +++F +M S NV+PDE +++S+ S
Sbjct: 205 RMYFDKMPERSVVSWNAMLSGYAQGGAPEETIRLFNDMLSPGNVQPDETTWATVISSCSS 264
Query: 116 LGHLELAQWVDSYVSK--SSIDLQQDHVI-AALLDMNAKCGNMDRALKLFKE-------- 164
LG L++ S V K + + ++ + ALLDM+AKCGN++ A K+F++
Sbjct: 265 LGDPCLSE---SIVRKLDDKVGFRPNYFVKTALLDMHAKCGNLEAAHKIFEQLGVYKYRS 321
Query: 165 --------------------------MPKRDLVSYCSMIQGLSIHGCGEDAVRLFNSMLM 198
MP+RD VS+ SMI G + +G A++LF M+
Sbjct: 322 SVPWNAMISAYARVGDLPSAKHLFDKMPQRDTVSWNSMIAGYTQNGESFKAIKLFEEMIS 381
Query: 199 --EGLVPDEVAFTIILTACSHSGLVDEGWNYFQSMKQKYGISPSPDHFACMVDLLSRSGH 256
+ PDEV + +AC H G + G N+ S+ + I S + ++++ SR G
Sbjct: 382 SEDSRKPDEVTMVSVFSACGHLGELGLG-NWAVSILKVNHIQISISVYNSLINMYSRCGS 440
Query: 257 LGDAYELMKSMHEPHAGAWGALLGACKLHG 286
+ DA + + M ++ L+ HG
Sbjct: 441 MQDAVLIFQEMATRDLVSYNTLISGFAEHG 470
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 66/262 (25%), Positives = 117/262 (44%), Gaps = 44/262 (16%)
Query: 47 YAKAGDMAAARFLFEQATEKDVVAWSALISGYVQNGQPNQALKVFLEMESKNVKPDEFIL 106
YAK G + AR LF++ ++ V W+ +ISGY + G +A +F M + + +
Sbjct: 129 YAKYGPIEFARKLFDEMPDRTVADWNVMISGYWKCGNEEEASTLFHVMGDQEISRNVITW 188
Query: 107 VSLMSATSQLGHLELAQWVDSYVSKSSIDLQQDHVIAALLDMNAKCGNMDRALKLFKEMP 166
++++ GH AK GN+ A F +MP
Sbjct: 189 TTMIT-----GH-------------------------------AKKGNLKTARMYFDKMP 212
Query: 167 KRDLVSYCSMIQGLSIHGCGEDAVRLFNSMLMEGLV-PDEVAFTIILTACSHSGLVDEGW 225
+R +VS+ +M+ G + G E+ +RLFN ML G V PDE + ++++CS G
Sbjct: 213 ERSVVSWNAMLSGYAQGGAPEETIRLFNDMLSPGNVQPDETTWATVISSCSSLGDPCLSE 272
Query: 226 NYFQSMKQKYGISPSPDHFACMVDLLSRSGHLGDAYELMKSM---HEPHAGAWGALLGAC 282
+ + + K G P+ ++D+ ++ G+L A+++ + + + W A++ A
Sbjct: 273 SIVRKLDDKVGFRPNYFVKTALLDMHAKCGNLEAAHKIFEQLGVYKYRSSVPWNAMISAY 332
Query: 283 KLHGDSDLGEIVANQLFELEPQ 304
GD A LF+ PQ
Sbjct: 333 ARVGDLP----SAKHLFDKMPQ 350
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 61/248 (24%), Positives = 109/248 (43%), Gaps = 20/248 (8%)
Query: 59 LFEQATEKDVVAWSALISGYVQNGQPNQALKVFLE--MESKNVKPDEFILVSLMSATSQL 116
+F AT DV ++ ++ Y Q G +Q + ++ ++KP+ +M +
Sbjct: 43 IFHAATHPDVRVFTFMLKYYSQIGVHSQVFVSLFKHMLQHCDIKPNASFYSVMMKSAGSE 102
Query: 117 GHLELAQWVDSYVSKSSIDLQQDHVIA-ALLDMNAKCGNMDRALKLFKEMPKRDLVSYCS 175
L LA +V KS D +DH + +L + AK G ++ A KLF EMP R + +
Sbjct: 103 SMLFLA-----HVLKSGYD--RDHYVRNGILGIYAKYGPIEFARKLFDEMPDRTVADWNV 155
Query: 176 MIQGLSIHGCGEDAVRLFNSMLMEGLVPDEVAFTIILTACSHSGLVDEGWNYFQSMKQKY 235
MI G G E+A LF+ M + + + + +T ++T + G + YF M ++
Sbjct: 156 MISGYWKCGNEEEASTLFHVMGDQEISRNVITWTTMITGHAKKGNLKTARMYFDKMPERS 215
Query: 236 GISPSPDHFACMVDLLSRSGHLGDAYELMKSMH-----EPHAGAWGALLGACKLHGDSDL 290
+S + M+ ++ G + L M +P W ++ +C GD L
Sbjct: 216 VVS-----WNAMLSGYAQGGAPEETIRLFNDMLSPGNVQPDETTWATVISSCSSLGDPCL 270
Query: 291 GEIVANQL 298
E + +L
Sbjct: 271 SESIVRKL 278
>Medtr7g076020.1 | pentatricopeptide (PPR) repeat protein | HC |
chr7:28566228-28568873 | 20130731
Length = 808
Score = 275 bits (704), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 143/384 (37%), Positives = 223/384 (58%), Gaps = 39/384 (10%)
Query: 1 MPQRNVASWNAMLCGFVKDGDLSSARGVFDAMPEKNV----VSFTT-------------- 42
M +V SWN+++ GFV+ G A +F M +N+ +F +
Sbjct: 297 MEDDDVVSWNSLMVGFVRHGLEEEALRLFKNMHGRNMKIDDYTFPSVLNCCVVGSINPKS 356
Query: 43 -------------------MIDGYAKAGDMAAARFLFEQATEKDVVAWSALISGYVQNGQ 83
++D YAK GDM A +FE+ EKDV++W++L++GY QN
Sbjct: 357 VHGLIIKTGFENYKLVSNALVDMYAKTGDMDCAYTVFEKMLEKDVISWTSLVTGYAQNNS 416
Query: 84 PNQALKVFLEMESKNVKPDEFILVSLMSATSQLGHLELAQWVDSYVSKSSIDLQQDHVIA 143
++LK+F +M V PD+FI+ S++SA ++L LE + V KS + Q V
Sbjct: 417 HEESLKIFCDMRVTGVNPDQFIVASILSACAELTLLEFGKQVHLDFIKSGLRWSQS-VYN 475
Query: 144 ALLDMNAKCGNMDRALKLFKEMPKRDLVSYCSMIQGLSIHGCGEDAVRLFNSMLMEGLVP 203
+L+ M AKCG +D A +F M +D++++ ++I G + +G G ++++ +++M+ G P
Sbjct: 476 SLVAMYAKCGCLDDADAIFVSMQVKDVITWTAIIVGYAQNGKGRNSLKFYDAMVSSGTRP 535
Query: 204 DEVAFTIILTACSHSGLVDEGWNYFQSMKQKYGISPSPDHFACMVDLLSRSGHLGDAYEL 263
D + F +L ACSH+GLVDEG YFQ M + YGI P P+H+ACM+DL RSG L +A +L
Sbjct: 536 DFITFIGLLFACSHAGLVDEGRKYFQQMNKVYGIKPGPEHYACMIDLFGRSGKLDEAKQL 595
Query: 264 MKSMH-EPHAGAWGALLGACKLHGDSDLGEIVANQLFELEPQNAANYILLSNIYAAAERW 322
+ M +P A W +LL AC++H + +L E A LFELEP NA Y++LSN+Y+A+ +W
Sbjct: 596 LDQMDVKPDATVWKSLLSACRVHENLELAERAATNLFELEPMNAMPYVMLSNMYSASRKW 655
Query: 323 IDVSLVRSRMRERSVQKIPGCSKL 346
DV+ +R M+ + + K PGCS L
Sbjct: 656 NDVAKIRKLMKSKGIVKEPGCSWL 679
Score = 117 bits (293), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 84/279 (30%), Positives = 141/279 (50%), Gaps = 4/279 (1%)
Query: 10 NAMLCGFVKDGDLSSARGVFDAMPEKNVVSFTTMIDGYAKAGDMAAARFLFEQATEKDVV 69
N +L K G ++ AR +FD MP+K+ S+ TMI Y G + AR LF+ + K +
Sbjct: 40 NQLLNQLSKSGQVNDARKLFDKMPQKDEYSWNTMISSYVNVGRLVEARELFDGCSCKSSI 99
Query: 70 AWSALISGYVQNGQPNQALKVFLEMESKNVKPDEFILVSLMSATSQLGHLELAQWVDSYV 129
WS++ISGY + G +A +F M + K +F L S++ S LG ++ + + +V
Sbjct: 100 TWSSIISGYCKFGCKVEAFDLFRSMRLEGWKASQFTLGSVLRVCSSLGLIQTGEMIHGFV 159
Query: 130 SKSSIDLQQDHVIAALLDMNAKCGNMDRALKLFK--EMPKRDLVSYCSMIQGLSIHGCGE 187
K+ + V+ L+DM AKC + A LFK E +++ V + +M+ G + +G G
Sbjct: 160 VKNGFE-GNVFVVTGLVDMYAKCKCVSEAEFLFKGLEFDRKNHVLWTAMVTGYAQNGDGY 218
Query: 188 DAVRLFNSMLMEGLVPDEVAFTIILTACSHSGLVDEGWNYFQSMKQKYGISPSPDHFACM 247
AV F M +G+ ++ F ILTACS S L K G + + +
Sbjct: 219 KAVEFFRYMHAQGVECNQYTFPTILTACS-SVLARCFGEQVHGFIVKSGFGSNVYVQSAL 277
Query: 248 VDLLSRSGHLGDAYELMKSMHEPHAGAWGALLGACKLHG 286
VD+ ++ G L +A ++++M + +W +L+ HG
Sbjct: 278 VDMYAKCGDLKNAKNMLETMEDDDVVSWNSLMVGFVRHG 316
Score = 114 bits (284), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 70/244 (28%), Positives = 135/244 (55%), Gaps = 4/244 (1%)
Query: 36 NVVSFTTMIDGYAKAGDMAAARFLFEQATEKDVVAWSALISGYVQNGQPNQALKVFLEME 95
NV + ++D YAK GD+ A+ + E + DVV+W++L+ G+V++G +AL++F M
Sbjct: 270 NVYVQSALVDMYAKCGDLKNAKNMLETMEDDDVVSWNSLMVGFVRHGLEEEALRLFKNMH 329
Query: 96 SKNVKPDEFILVSLMSATSQLGHLELAQWVDSYVSKSSIDLQQDHVIAALLDMNAKCGNM 155
+N+K D++ S+++ +G + + V + K+ + V AL+DM AK G+M
Sbjct: 330 GRNMKIDDYTFPSVLNCCV-VGSIN-PKSVHGLIIKTGFE-NYKLVSNALVDMYAKTGDM 386
Query: 156 DRALKLFKEMPKRDLVSYCSMIQGLSIHGCGEDAVRLFNSMLMEGLVPDEVAFTIILTAC 215
D A +F++M ++D++S+ S++ G + + E+++++F M + G+ PD+ IL+AC
Sbjct: 387 DCAYTVFEKMLEKDVISWTSLVTGYAQNNSHEESLKIFCDMRVTGVNPDQFIVASILSAC 446
Query: 216 SHSGLVDEGWNYFQSMKQKYGISPSPDHFACMVDLLSRSGHLGDAYELMKSMHEPHAGAW 275
+ L++ G K G+ S + +V + ++ G L DA + SM W
Sbjct: 447 AELTLLEFGKQVHLDF-IKSGLRWSQSVYNSLVAMYAKCGCLDDADAIFVSMQVKDVITW 505
Query: 276 GALL 279
A++
Sbjct: 506 TAII 509
>Medtr5g020650.1 | PPR containing plant-like protein | HC |
chr5:7912169-7910613 | 20130731
Length = 518
Score = 275 bits (702), Expect = 6e-74, Method: Compositional matrix adjust.
Identities = 134/343 (39%), Positives = 218/343 (63%), Gaps = 4/343 (1%)
Query: 6 VASWNAMLCGFVKDGDLSSARGVFDAMPEKNVVSFTTMIDGYAKAGDMAAARFLFEQATE 65
V + N++L + G + SA +FD +P +++VS+ TMIDGY K G++ A +F+ E
Sbjct: 146 VYATNSLLRVYAISGSIKSAHVLFDLLPSRDIVSWNTMIDGYIKCGNVEMAYKIFQAMPE 205
Query: 66 KDVVAWSALISGYVQNGQPNQALKVFLEMESKNVKPDEFILVSLMSATSQLGHLELAQWV 125
K+V++W+++I G+V+ G +AL + +M +KPD+ L +SA + LG LE +W+
Sbjct: 206 KNVISWTSMIVGFVRTGMHKEALCLLQQMLVAGIKPDKITLSCSLSACAGLGALEQGKWI 265
Query: 126 DSYVSKSSIDLQQDHVIA-ALLDMNAKCGNMDRALKLFKEMPKRDLVSYCSMIQGLSIHG 184
+Y+ K+ I + D V+ AL+DM KCG M +AL +F ++ K+ + ++ ++I G ++HG
Sbjct: 266 HTYIGKNKIKI--DPVLGCALIDMYVKCGEMKKALLVFSKLEKKCVYTWTAIIGGFAVHG 323
Query: 185 CGEDAVRLFNSMLMEGLVPDEVAFTIILTACSHSGLVDEGWNYFQSMKQKYGISPSPDHF 244
G +A+ F M G+ P FT +LTACSH+GLV+EG + F+SM Y + P +H+
Sbjct: 324 KGSEALDWFTQMQKAGIKPTSFTFTAVLTACSHTGLVEEGKSLFESMSTFYNMKPVMEHY 383
Query: 245 ACMVDLLSRSGHLGDAYELMKSMH-EPHAGAWGALLGACKLHGDSDLGEIVANQLFELEP 303
CMVDLL R+G L +A E ++SM +P+A WG+LL AC LH +LG+ + L EL+P
Sbjct: 384 GCMVDLLGRAGFLKEAKEFVESMPIKPNAAIWGSLLNACHLHKHLELGKEIGKFLIELDP 443
Query: 304 QNAANYILLSNIYAAAERWIDVSLVRSRMRERSVQKIPGCSKL 346
++ YI L++I+AAA W + S VRS ++ + + +PGCS +
Sbjct: 444 EHDGRYIHLASIHAAAGEWDEASQVRSHIKNKGLLNLPGCSTI 486
>Medtr7g074040.1 | pentatricopeptide (PPR) repeat protein | HC |
chr7:27639852-27642151 | 20130731
Length = 707
Score = 271 bits (694), Expect = 5e-73, Method: Compositional matrix adjust.
Identities = 142/345 (41%), Positives = 213/345 (61%), Gaps = 3/345 (0%)
Query: 1 MPQRNVASWNAMLCGFVKDGDLSSARGVFDAMPEKNVVSFTTMIDGYAKAGDMAAARFLF 60
MP+RN SW AML G+ + G + A +F+AMP K +V+ MI + AG+M AR +F
Sbjct: 233 MPERNEVSWTAMLMGYTQSGRMKEAFELFEAMPVKWIVACNEMILQFGLAGEMHRARMMF 292
Query: 61 EQATEKDVVAWSALISGYVQNGQPNQALKVFLEMESKNVKPDEFILVSLMSATSQLGHLE 120
E E+D W+A+I + + G +AL +F M+ + V + ++S++S + L L+
Sbjct: 293 EGMKERDEGTWNAMIKVFERKGLDLEALGLFARMQREGVALNFPSMISVLSVCASLASLD 352
Query: 121 LAQWVDSYVSKSSIDLQQDHVIAALLDMNAKCGNMDRALKLFKEMPKRDLVSYCSMIQGL 180
+ V + + +S D Q +V + L+ M KCG++ RA +F +D+V + SMI G
Sbjct: 353 HGRQVHARLVRSEFD-QDLYVASVLITMYVKCGDLVRAKGIFNRFLFKDVVMWNSMITGY 411
Query: 181 SIHGCGEDAVRLFNSMLMEGLVPDEVAFTIILTACSHSGLVDEGWNYFQSMKQKYGISPS 240
S HG GE+A+ +F+ M G+ PDEV F +L+ACS+SG V EG+ F++MK Y + P
Sbjct: 412 SQHGLGEEALNVFHDMCSSGVQPDEVTFIGVLSACSYSGKVKEGFEIFEAMKCTYQVEPG 471
Query: 241 PDHFACMVDLLSRSGHLGDAYELMKSM-HEPHAGAWGALLGACKLHGDSDLGEIVANQLF 299
+H+ACMVDLL R+G + +A EL++ M EP A WGALLGAC+ H DL E+ +L
Sbjct: 472 IEHYACMVDLLGRAGRVDEAMELVEKMPMEPDAIVWGALLGACRNHMKLDLAEVAVEKLA 531
Query: 300 ELEPQNAANYILLSNIYAAAERWIDVSLVRSRMRERSVQKIPGCS 344
+LEP+NA Y+LLS++YA RW DV ++R ++ R V K PGCS
Sbjct: 532 KLEPKNAGPYVLLSHMYATKGRWRDVEVLRKKI-NRRVIKFPGCS 575
Score = 137 bits (346), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 86/289 (29%), Positives = 150/289 (51%), Gaps = 24/289 (8%)
Query: 1 MPQRNVASWNAMLCGFVKDGDLSSARGVFDAMPEKNVVSFTTMIDGYAKAGDMAAARFLF 60
+PQR +ASWNAM+ + + A +FD MP++N VSF MI GY K G +A AR +F
Sbjct: 47 LPQRTIASWNAMVSAYFESHKPRDALLLFDQMPQRNTVSFNGMISGYVKNGMVADARKVF 106
Query: 61 EQATEKDVVAWSALISGYVQNGQPNQALKVFLEMESKNVKPDEFILVSLMSATSQLGHLE 120
+ E++VV+W++++ GYVQ G +A K+F EM +NV +S T +G L
Sbjct: 107 DVMPERNVVSWTSMVRGYVQEGMVEEAEKLFWEMPRRNV----------VSWTVMIGGLL 156
Query: 121 LAQWVDSYVSKSSIDLQQDHVIAALLDM---NAKCGNMDRALKLFKEMPKRDLVSYCSMI 177
+D +K D+ + + + +M + G +D A +LF EM R++ ++ +M+
Sbjct: 157 KESRIDD--AKKLFDMIPEKDVVVVTNMIGGYCQVGRLDEARELFDEMKVRNVFTWTTMV 214
Query: 178 QGLSIHGCGEDAVRLFNSMLMEGLVPDEVAFTIILTACSHSGLVDEGWNYFQSMKQKYGI 237
G + +G + A +LF M +EV++T +L + SG + E + F++M K+ +
Sbjct: 215 SGYAKNGRVDVARKLFEVMPER----NEVSWTAMLMGYTQSGRMKEAFELFEAMPVKWIV 270
Query: 238 SPSPDHFACMVDLLSRSGHLGDAYELMKSMHEPHAGAWGALLGACKLHG 286
+ + M+ +G + A + + M E G W A++ + G
Sbjct: 271 ACNE-----MILQFGLAGEMHRARMMFEGMKERDEGTWNAMIKVFERKG 314
>Medtr1g012380.1 | PPR containing plant-like protein | HC |
chr1:2444546-2447496 | 20130731
Length = 600
Score = 271 bits (694), Expect = 5e-73, Method: Compositional matrix adjust.
Identities = 136/314 (43%), Positives = 207/314 (65%), Gaps = 4/314 (1%)
Query: 34 EKNVVSFTTMIDGYAKAGD--MAAARFLFEQATEKDVVAWSALISGYVQNGQPNQALKVF 91
E++V T+I Y G+ A +F+ + + D V WSA+I+G+V+ G ++A+ +F
Sbjct: 157 EEDVHVLNTLIHMYCCLGEDGFEFAEKVFDDSPKMDTVTWSAMIAGFVRLGCSSRAVDLF 216
Query: 92 LEMESKNVKPDEFILVSLMSATSQLGHLELAQWVDSYVSKSSIDLQQDHVIAALLDMNAK 151
EM+ V PDE +VS++SA + LG LEL +WV+SYV K +I + + AL+DM AK
Sbjct: 217 REMQVMGVCPDEITMVSVLSACADLGALELGKWVESYVEKKNIP-KSVELCNALIDMFAK 275
Query: 152 CGNMDRALKLFKEMPKRDLVSYCSMIQGLSIHGCGEDAVRLFNSMLMEGLVPDEVAFTII 211
CGN+D+A+KLF++M R +VS+ S+I GL++HG G DAV LF+ M+ G+ PD+VAF +
Sbjct: 276 CGNVDKAIKLFRQMDSRTIVSWTSVIAGLAMHGRGLDAVSLFDEMVENGITPDDVAFIGV 335
Query: 212 LTACSHSGLVDEGWNYFQSMKQKYGISPSPDHFACMVDLLSRSGHLGDAYELMKSM-HEP 270
L+ACSHSGLVD+G YF SM++ + I P +H+ CMVDLL R G + +A+E ++ M EP
Sbjct: 336 LSACSHSGLVDKGRYYFGSMERNFSIVPKVEHYGCMVDLLCRGGFVKEAFEFVQKMPFEP 395
Query: 271 HAGAWGALLGACKLHGDSDLGEIVANQLFELEPQNAANYILLSNIYAAAERWIDVSLVRS 330
+ W ++ AC G+ LGE ++ +L + EP + +NY+LLSNIYA +W + VR
Sbjct: 396 NQIIWRTIITACHATGELKLGESISKELIKSEPMHESNYVLLSNIYAKLRQWEKKTKVRE 455
Query: 331 RMRERSVQKIPGCS 344
M R ++K+PG +
Sbjct: 456 MMDMRGMKKVPGST 469
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 47/205 (22%), Positives = 93/205 (45%), Gaps = 41/205 (20%)
Query: 2 PQRNVASWNAMLCGFVKDGDLSSARGVFDAM------PE--------------------- 34
P+ + +W+AM+ GFV+ G S A +F M P+
Sbjct: 189 PKMDTVTWSAMIAGFVRLGCSSRAVDLFREMQVMGVCPDEITMVSVLSACADLGALELGK 248
Query: 35 ------------KNVVSFTTMIDGYAKAGDMAAARFLFEQATEKDVVAWSALISGYVQNG 82
K+V +ID +AK G++ A LF Q + +V+W+++I+G +G
Sbjct: 249 WVESYVEKKNIPKSVELCNALIDMFAKCGNVDKAIKLFRQMDSRTIVSWTSVIAGLAMHG 308
Query: 83 QPNQALKVFLEMESKNVKPDEFILVSLMSATSQLGHLELAQWVDSYVSKS-SIDLQQDHV 141
+ A+ +F EM + PD+ + ++SA S G ++ ++ + ++ SI + +H
Sbjct: 309 RGLDAVSLFDEMVENGITPDDVAFIGVLSACSHSGLVDKGRYYFGSMERNFSIVPKVEHY 368
Query: 142 IAALLDMNAKCGNMDRALKLFKEMP 166
++D+ + G + A + ++MP
Sbjct: 369 -GCMVDLLCRGGFVKEAFEFVQKMP 392
>Medtr7g005870.1 | PPR containing plant-like protein | HC |
chr7:378521-375734 | 20130731
Length = 601
Score = 270 bits (689), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 134/341 (39%), Positives = 221/341 (64%), Gaps = 4/341 (1%)
Query: 1 MPQRNVASWNAMLCGFVKDGDLSSARGVFDAMPEKNVVSFTTMIDGYAKAGDMAAARFLF 60
M R+VA++N M+ G+VK G + AR +FD M KNV+S+T+M+ GY++ GD+ ARFLF
Sbjct: 215 MVDRDVAAFNVMIDGYVKMGRMDLARDLFDKMRVKNVISWTSMVHGYSEDGDVDEARFLF 274
Query: 61 EQATEKDVVAWSALISGYVQNGQPNQALKVFLEMESK-NVKPDEFILVSLMSATSQLGHL 119
+ EK+V++W+A+I GY QNG+ + ALK+F EM +V+ +E +VS++ A + L L
Sbjct: 275 DCMPEKNVLSWNAMIRGYCQNGRSHDALKLFCEMRGNVDVEMNEVTVVSVLPAVADLSAL 334
Query: 120 ELAQWVDSYVSKSSIDLQQDHVIAALLDMNAKCGNMDRALKLFKEMPKRDLVSYCSMIQG 179
+L WV +V ++ +D HV AL+DM AKCG + +A +F+EM ++D S+ ++I G
Sbjct: 335 DLGGWVHGFVQRNQLD-GSVHVCNALVDMYAKCGEIGKAKLVFEEMTEKDTGSWNALING 393
Query: 180 LSIHGCGEDAVRLFNSMLMEGLVPDEVAFTIILTACSHSGLVDEGWNYFQSMKQKYGISP 239
++GC ++A+ +F ML EG P+++ T +L+AC+H GLV+EG F++M +++GI P
Sbjct: 394 YGVNGCAKEALEVFAMMLREGFEPNQITMTSVLSACNHCGLVEEGRRCFEAM-ERFGIVP 452
Query: 240 SPDHFACMVDLLSRSGHLGDAYELMKSM-HEPHAGAWGALLGACKLHGDSDLGEIVANQL 298
+H+ CM+DLL R+G L +A +L+++M ++P+ + L AC D E +
Sbjct: 453 QIEHYGCMIDLLGRAGRLDEAEKLIQAMPYDPNEIILTSFLFACCYFEDVSRAERILKVA 512
Query: 299 FELEPQNAANYILLSNIYAAAERWIDVSLVRSRMRERSVQK 339
++E + A +Y++L N+YA RW DV V+ M++R K
Sbjct: 513 VKMEKEGAGDYVMLRNLYATERRWADVEDVKEMMKKRGSNK 553
Score = 108 bits (269), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 90/307 (29%), Positives = 147/307 (47%), Gaps = 48/307 (15%)
Query: 16 FVKDGDLSSARGVFDAMPEKNVVSFTTMIDGYAKAGDMAAARFLFEQATEKDVVAWSALI 75
+VK GD+ AR VFD M +++VS+T +I GYA+ GDM AR LF+ ++DV A++ +I
Sbjct: 168 YVKFGDVGFARKVFDEMSVRSLVSWTAVIVGYARCGDMVEARKLFDGMVDRDVAAFNVMI 227
Query: 76 SGYVQNGQPNQALKVFLEMESKNVKPDEFILVSLMSATSQLGHLELAQWVDSYVSKSSID 135
GYV+ G+ + A +F +M KNV W S V S D
Sbjct: 228 DGYVKMGRMDLARDLFDKMRVKNV----------------------ISWT-SMVHGYSED 264
Query: 136 LQQDHVIAALLDMNAKCGNMDRALKLFKEMPKRDLVSYCSMIQGLSIHGCGEDAVRLFNS 195
G++D A LF MP+++++S+ +MI+G +G DA++LF
Sbjct: 265 -----------------GDVDEARFLFDCMPEKNVLSWNAMIRGYCQNGRSHDALKLFCE 307
Query: 196 MLMEGLVP-DEVAFTIILTACSHSGLVDEGWNYFQSMKQKYGISPSPDHFACMVDLLSRS 254
M V +EV +L A + +D G + Q+ + S +VD+ ++
Sbjct: 308 MRGNVDVEMNEVTVVSVLPAVADLSALDLG-GWVHGFVQRNQLDGSVHVCNALVDMYAKC 366
Query: 255 GHLGDAYELMKSMHEPHAGAWGALLGACKLHGDSDLG-EIVANQLFE-LEPQNAANYILL 312
G +G A + + M E G+W AL+ ++G + E+ A L E EP N I +
Sbjct: 367 GEIGKAKLVFEEMTEKDTGSWNALINGYGVNGCAKEALEVFAMMLREGFEP----NQITM 422
Query: 313 SNIYAAA 319
+++ +A
Sbjct: 423 TSVLSAC 429
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 44/145 (30%), Positives = 72/145 (49%), Gaps = 10/145 (6%)
Query: 140 HVIAALLDMNAKCGNMDRALKLFKEMPKRDLVSYCSMIQGLSIHGCGEDAVRLFNSMLME 199
+V +L+DM K G++ A K+F EM R LVS+ ++I G + G +A +LF+ M+
Sbjct: 159 YVGTSLVDMYVKFGDVGFARKVFDEMSVRSLVSWTAVIVGYARCGDMVEARKLFDGMVDR 218
Query: 200 GLVPDEVAFTIILTACSHSGLVDEGWNYFQSMKQKYGISPSPDHFACMVDLLSRSGHLGD 259
D AF +++ G +D + F M+ K IS + MV S G + +
Sbjct: 219 ----DVAAFNVMIDGYVKMGRMDLARDLFDKMRVKNVIS-----WTSMVHGYSEDGDVDE 269
Query: 260 AYELMKSMHEPHAGAWGALL-GACK 283
A L M E + +W A++ G C+
Sbjct: 270 ARFLFDCMPEKNVLSWNAMIRGYCQ 294
>Medtr2g071810.1 | PPR containing plant-like protein | HC |
chr2:30002268-30006207 | 20130731
Length = 789
Score = 269 bits (687), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 138/346 (39%), Positives = 220/346 (63%), Gaps = 4/346 (1%)
Query: 1 MPQRNVASWNAMLCGFVKDGDLSSARGVFDAMPEKNVVSFTTMIDGYAKAGDMAAARFLF 60
M +++ +WN+++ G++ + ++ +A VF+ MPEK+++S+T MI G+A G + A LF
Sbjct: 318 MGNKDLVTWNSLISGYIYNNEVDAAYEVFERMPEKDLISWTAMIRGFATDGRIGKAVELF 377
Query: 61 EQATEKDVVAWSALISGYVQNGQPNQALKVFLEMESKNVKPDEFILVSLMSATSQLGHLE 120
+ EKD W+ LISG+V N + +AL F+ M + +P+ + S++SA++ L L
Sbjct: 378 DTLKEKDDFVWTVLISGFVSNEEYEEALHWFVRMSREQCRPNPLTISSVLSASASLVALN 437
Query: 121 LAQWVDSYVSKSSIDLQQDHVIA-ALLDMNAKCGNMDRALKLFKEMPKRDLVSYCSMIQG 179
+ S+V K ++L+ D I +L+ AKCGN+ A K+F ++ + ++VSY S+I G
Sbjct: 438 EGLQIHSHVLK--MNLEYDLSIQNSLISFYAKCGNVTDAYKIFVDVVEPNVVSYNSVING 495
Query: 180 LSIHGCGEDAVRLFNSMLMEGLVPDEVAFTIILTACSHSGLVDEGWNYFQSMKQKYGISP 239
+ +G GE+A+ ++ M E L P+ V F +L+AC+H+GL++EGWN F +MK +YGI P
Sbjct: 496 FAQNGFGEEALSMYKRMQNESLEPNRVTFLAVLSACTHAGLIEEGWNLFNTMKSRYGIEP 555
Query: 240 SPDHFACMVDLLSRSGHLGDAYELMKSMH-EPHAGAWGALLGACKLHGDSDLGEIVANQL 298
DH+ACMVDLL R+G L +A ++SM EPH+G WGALL A H DL ++ A +
Sbjct: 556 EADHYACMVDLLGRAGLLDEAIHFVRSMPLEPHSGVWGALLAASCAHQRIDLAKLAAQHI 615
Query: 299 FELEPQNAANYILLSNIYAAAERWIDVSLVRSRMRERSVQKIPGCS 344
ELEP NA Y++LSN Y+A+ + + LVR + ++K PGCS
Sbjct: 616 TELEPANATPYVVLSNTYSASGQKFEGDLVRKTKNLKGIKKSPGCS 661
Score = 110 bits (274), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 82/310 (26%), Positives = 146/310 (47%), Gaps = 20/310 (6%)
Query: 1 MPQRNVASWNAMLCGFVKDGDLSSARGVFDAMPEKNVVSFTTMIDGYAKAG-DMAAARFL 59
M Q+N+ +W AML + ++G +++AR +FD MPE+ ++ MI GY + G ++ A L
Sbjct: 56 MSQKNIVTWTAMLTVYAQNGQITTARKLFDEMPERTTATYNAMISGYIRNGCNVTKAYEL 115
Query: 60 FEQATEKDVVAWSALISGYVQNGQPNQALKVFLEMESKNVKPDEF----ILVSLMSATSQ 115
F +++ V+++A+I G V+ + + A K++ E P EF +L++ +
Sbjct: 116 FTSFHDRNEVSYAAMIMGLVKARKFDLAEKLYRE------APHEFRDPVCSNALINGYLK 169
Query: 116 LGHLELAQWVDSYVSKSSIDLQQDHVIAALLDMNAKCGNMDRALKLFKEMPKRDLVSYCS 175
+G + A V V S D+ + L + G +D A LF MP+R++VS+ +
Sbjct: 170 IGEMNEALRVFENVGVSKRDVVSWSAVVGGL---CRDGRIDNARMLFDRMPERNVVSWSA 226
Query: 176 MIQGLSIHGCGEDAVRLFNSMLMEGLVP-DEVAFTIILTACSHSGLVDEGWNYFQSMKQK 234
MI G G E+ LF M EG+V + TI++ C + G V EG + +
Sbjct: 227 MIDGYMEKGLFENGFGLFLDMRREGVVEVNSTTMTIMIKGCGNCGRVKEGIQ-IHGLVSR 285
Query: 235 YGISPSPDHFACMVDLLSRSGHLGDAYELMKSMHEPHAGAWGALLGACKLHGDSDLGEIV 294
G ++ + S G+ A ++ M W +L+ + + D
Sbjct: 286 LGFEFGSVLSNTIITMYSLFGYTDMAKKVFSGMGNKDLVTWNSLISGYIYNNEVD----A 341
Query: 295 ANQLFELEPQ 304
A ++FE P+
Sbjct: 342 AYEVFERMPE 351
Score = 93.2 bits (230), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 62/246 (25%), Positives = 130/246 (52%), Gaps = 15/246 (6%)
Query: 1 MPQRNVASWNAMLCGFVKDGDLSSARGVFDAMPEKNVVSFTTMIDGYAKAGDMAAARFLF 60
+ +R+V SW+A++ G +DG + +AR +FD MPE+NVVS++ MIDGY + G LF
Sbjct: 185 VSKRDVVSWSAVVGGLCRDGRIDNARMLFDRMPERNVVSWSAMIDGYMEKGLFENGFGLF 244
Query: 61 -----EQATEKDVVAWSALISGYVQNGQPNQALKVFLEMESKNVKPDEFILVSLMSATSQ 115
E E + + +I G G+ + +++ + + + ++++ S
Sbjct: 245 LDMRREGVVEVNSTTMTIMIKGCGNCGRVKEGIQIHGLVSRLGFEFGSVLSNTIITMYSL 304
Query: 116 LGHLELAQWVDSYVSKSSIDLQQDHVIAALLDMNAKCGNMDRALKLFKEMPKRDLVSYCS 175
G+ ++A+ V S + + + + +I+ + N +D A ++F+ MP++DL+S+ +
Sbjct: 305 FGYTDMAKKVFSGMGNKDL-VTWNSLISGYIYNN----EVDAAYEVFERMPEKDLISWTA 359
Query: 176 MIQGLSIHGCGEDAVRLFNSMLMEGLVPDEVAFTIILTACSHSGLVDEGWNYFQSMKQKY 235
MI+G + G AV LF+++ + D+ +T++++ + +E ++F M ++
Sbjct: 360 MIRGFATDGRIGKAVELFDTLKEK----DDFVWTVLISGFVSNEEYEEALHWFVRMSREQ 415
Query: 236 GISPSP 241
P+P
Sbjct: 416 -CRPNP 420
>Medtr2g007570.1 | PPR containing plant-like protein | HC |
chr2:1033154-1029007 | 20130731
Length = 558
Score = 268 bits (686), Expect = 4e-72, Method: Compositional matrix adjust.
Identities = 139/375 (37%), Positives = 216/375 (57%), Gaps = 36/375 (9%)
Query: 4 RNVASWNAMLCGFVKDGDLSSARGVFDAMPEKNVVSFTTMIDGYAKAGDMAAARFLFEQA 63
R+V +W AM+CG+ K G + AR +FD M E+N ++TTM+ GYA GDM AA L++
Sbjct: 179 RDVVAWTAMICGYAKAGRMVDARFLFDNMGERNSFTWTTMVAGYANYGDMKAAMELYDVM 238
Query: 64 TEKDVVAWSALISGY--------------------------------VQNGQPNQALKVF 91
KD V W A+I+GY QNG +A++++
Sbjct: 239 NGKDEVTWVAMIAGYGKLGNVSEARRIFDEITVPWNPSTCAALLACYAQNGHAREAIEMY 298
Query: 92 LEMESKNVKPDEFILVSLMSATSQLGHLELAQWVDSYVSKSSIDLQQDHVIA-ALLDMNA 150
+M +K + +V +SA +QL + ++ + + + ++ H+++ AL+ M +
Sbjct: 299 EKMRRAKIKVTDVAMVGAISACAQLRDIRMSNSLTYNIEEGFC--EKTHIVSNALIHMQS 356
Query: 151 KCGNMDRALKLFKEMPKRDLVSYCSMIQGLSIHGCGEDAVRLFNSMLMEGLVPDEVAFTI 210
KCGN+D A + F M RDL +Y +MI + HG +DA+ LF M EGL P++V F
Sbjct: 357 KCGNIDLAWREFNIMRNRDLYTYSAMIAAFAEHGKSQDAIDLFLKMQQEGLKPNQVTFVG 416
Query: 211 ILTACSHSGLVDEGWNYFQSMKQKYGISPSPDHFACMVDLLSRSGHLGDAYELMK-SMHE 269
+L ACS SGL++EG +FQ M + YGI P P+H+ CMVDLL R+G L AY L+K +
Sbjct: 417 VLNACSTSGLIEEGCRFFQIMTEMYGIEPLPEHYTCMVDLLGRAGQLEKAYSLIKENSTS 476
Query: 270 PHAGAWGALLGACKLHGDSDLGEIVANQLFELEPQNAANYILLSNIYAAAERWIDVSLVR 329
A WG+LL AC+++G+ +LGEI A LFE++P ++ NY+LL+N YA+ ++W V+
Sbjct: 477 ADATTWGSLLAACRVYGNVELGEIAARHLFEIDPTDSGNYVLLANTYASNDKWECAEEVK 536
Query: 330 SRMRERSVQKIPGCS 344
M ++ ++K G S
Sbjct: 537 KLMSKKGMKKPSGYS 551
>Medtr4g133610.1 | PPR containing plant-like protein | HC |
chr4:55889196-55891282 | 20130731
Length = 573
Score = 268 bits (684), Expect = 7e-72, Method: Compositional matrix adjust.
Identities = 139/378 (36%), Positives = 216/378 (57%), Gaps = 36/378 (9%)
Query: 1 MPQRNVASWNAMLCGFVKDGDLSSARGVFDAMPEKNVVSFTTMIDGYAKAGDMAAARFLF 60
M R+V +W AM+CG+ K G + AR +FD M E+N ++TTM+ GYA GDM AA L+
Sbjct: 176 MVDRDVVAWTAMICGYAKAGRMVDARLLFDNMGERNSFTWTTMVAGYANYGDMKAAMELY 235
Query: 61 EQATEKDVVAWSALISGY--------------------------------VQNGQPNQAL 88
+ K+ V W A+I+GY QNG +A+
Sbjct: 236 DVMNGKEEVTWVAMIAGYGKLGNVSEARRIFDEIPVPLNPSTCAALLACYAQNGHAREAI 295
Query: 89 KVFLEMESKNVKPDEFILVSLMSATSQLGHLELAQWVDSYVSKSSIDLQQDHVIA-ALLD 147
+++ +M +K + +V +SA +QL + ++ + + + ++ H+++ AL+
Sbjct: 296 EMYEKMRRAKIKVTDVAMVGAISACAQLRDIRMSNLLTYDIEEGFC--EKTHIVSNALIH 353
Query: 148 MNAKCGNMDRALKLFKEMPKRDLVSYCSMIQGLSIHGCGEDAVRLFNSMLMEGLVPDEVA 207
M +KCGN+D A + F M RDL +Y +MI + HG +DA+ LF M EGL P++V
Sbjct: 354 MQSKCGNIDLAWREFNIMRNRDLYTYSAMIAAFAEHGKSQDAIDLFLKMQQEGLTPNQVT 413
Query: 208 FTIILTACSHSGLVDEGWNYFQSMKQKYGISPSPDHFACMVDLLSRSGHLGDAYELMK-S 266
F +L ACS SGL++EG +FQ M YGI P P+H+ CMVDLL R+G L AY L+K +
Sbjct: 414 FVGVLNACSTSGLIEEGCRFFQIMTGVYGIEPLPEHYTCMVDLLGRAGQLEKAYSLIKEN 473
Query: 267 MHEPHAGAWGALLGACKLHGDSDLGEIVANQLFELEPQNAANYILLSNIYAAAERWIDVS 326
A WG+LL AC+++G+ +LGEI A LFE++P ++ NY+LL+N YA+ ++W
Sbjct: 474 STSADATTWGSLLAACRVYGNVELGEIAARHLFEIDPTDSGNYVLLANTYASNDKWERAE 533
Query: 327 LVRSRMRERSVQKIPGCS 344
V+ M ++ ++K G S
Sbjct: 534 EVKKLMSKKGMKKPSGYS 551
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 57/255 (22%), Positives = 119/255 (46%), Gaps = 13/255 (5%)
Query: 36 NVVSFTTMIDGYAKAGDMAAARFLFEQATEKDVVAWSALISGYVQNGQPNQALKVFLEME 95
N + T ++D YAK G + AR +F+ ++DVVAW+A+I GY + G+ A +F M
Sbjct: 149 NKIVQTALLDMYAKCGYVCDARDVFDGMVDRDVVAWTAMICGYAKAGRMVDARLLFDNMG 208
Query: 96 SKNVKPDEFILVSLMSATSQLGHLELAQWVDSYVSKSSIDLQQDHVIAALLDMNAKCGNM 155
+N F ++++ + G ++ A ++ Y ++ +++ A++ K GN+
Sbjct: 209 ERN----SFTWTTMVAGYANYGDMKAA--MELY---DVMNGKEEVTWVAMIAGYGKLGNV 259
Query: 156 DRALKLFKEMPKRDLVSYC-SMIQGLSIHGCGEDAVRLFNSMLMEGLVPDEVAFTIILTA 214
A ++F E+P S C +++ + +G +A+ ++ M + +VA ++A
Sbjct: 260 SEARRIFDEIPVPLNPSTCAALLACYAQNGHAREAIEMYEKMRRAKIKVTDVAMVGAISA 319
Query: 215 CSHSGLVDEGWNYFQSMKQKYGISPSPDHFA-CMVDLLSRSGHLGDAYELMKSMHEPHAG 273
C+ L D + + + G + ++ + S+ G++ A+ M
Sbjct: 320 CAQ--LRDIRMSNLLTYDIEEGFCEKTHIVSNALIHMQSKCGNIDLAWREFNIMRNRDLY 377
Query: 274 AWGALLGACKLHGDS 288
+ A++ A HG S
Sbjct: 378 TYSAMIAAFAEHGKS 392
>Medtr1g083890.1 | PPR containing plant-like protein | HC |
chr1:37365601-37367754 | 20130731
Length = 490
Score = 265 bits (677), Expect = 5e-71, Method: Compositional matrix adjust.
Identities = 128/328 (39%), Positives = 201/328 (61%), Gaps = 1/328 (0%)
Query: 20 GDLSSARGVFDAMPEKNVVSFTTMIDGYAKAGDMAAARFLFEQATEKDVVAWSALISGYV 79
G + A VFD M + VV + MI+G+ K GD+ LF++ ++ VV+W+ +IS
Sbjct: 157 GKMEDANKVFDEMLHREVVVWNIMINGFCKMGDLEIGLKLFKRMGQRSVVSWNLMISCLA 216
Query: 80 QNGQPNQALKVFLEMESKNVKPDEFILVSLMSATSQLGHLELAQWVDSYVSKSSIDLQQD 139
Q + +A +F EM + +PD+ LV+++ ++LG ++ +W+ SY + +
Sbjct: 217 QRKKDGEAFGIFREMLEQGFEPDDATLVTVLPVCARLGDVDAGEWIHSYADGKGLLRKVI 276
Query: 140 HVIAALLDMNAKCGNMDRALKLFKEMPKRDLVSYCSMIQGLSIHGCGEDAVRLFNSMLME 199
V +L+D KCGN++ A K+F EM K+++VS+ +MI GL ++G GE V LF M +
Sbjct: 277 SVGNSLVDFYCKCGNLEAAWKVFNEMTKKNVVSWNAMISGLGLNGKGELGVELFEKMARK 336
Query: 200 GLVPDEVAFTIILTACSHSGLVDEGWNYFQSMKQKYGISPSPDHFACMVDLLSRSGHLGD 259
G+ P + F +L C+H+G VD+G F SM K+ +SP +H+ C+VDLL R GH+ +
Sbjct: 337 GVTPSDSTFVGVLACCAHAGFVDKGREIFDSMTVKFKLSPKLEHYGCVVDLLGRCGHVKE 396
Query: 260 AYELMKSMH-EPHAGAWGALLGACKLHGDSDLGEIVANQLFELEPQNAANYILLSNIYAA 318
AY+L+++M P+A WGALL AC+ HGD ++ EI A +L LEP N+ NY+LLSN+YA
Sbjct: 397 AYDLIRNMPLMPNAALWGALLSACRTHGDREVAEIAAKELVRLEPGNSGNYVLLSNVYAE 456
Query: 319 AERWIDVSLVRSRMRERSVQKIPGCSKL 346
+W +V VR M+ ++K PG S L
Sbjct: 457 ERKWNEVEKVRVLMQGVGIKKNPGQSAL 484
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 67/278 (24%), Positives = 118/278 (42%), Gaps = 39/278 (14%)
Query: 56 ARFLFEQATEKDVVAWSALISGYVQNGQPNQALKVFLEME-SKNVKPDEFILVSLMSATS 114
A +F +++ ++++I + +Q+ F M+ + N+ PD F L+ ATS
Sbjct: 60 ATTIFNHTHHPNILLFNSIIKAHSSFPPFHQSFHFFNLMKMTHNILPDNFTFPPLLKATS 119
Query: 115 QLGHLELAQWVDSYVSKSSIDLQQDHVIAALLDMNAKCGNMDRA---------------- 158
L +L Q + ++V+ + V LL++ + CG M+ A
Sbjct: 120 YLRDYDLGQCLHAHVTALGF-YRHSPVEIGLLEVYSNCGKMEDANKVFDEMLHREVVVWN 178
Query: 159 ---------------LKLFKEMPKRDLVSYCSMIQGLSIHGCGEDAVRLFNSMLMEGLVP 203
LKLFK M +R +VS+ MI L+ +A +F ML +G P
Sbjct: 179 IMINGFCKMGDLEIGLKLFKRMGQRSVVSWNLMISCLAQRKKDGEAFGIFREMLEQGFEP 238
Query: 204 DEVAFTIILTACSHSGLVDEGWNYFQSMKQKYGISPSPDHFA-CMVDLLSRSGHLGDAYE 262
D+ +L C+ G VD G + S G+ +VD + G+L A++
Sbjct: 239 DDATLVTVLPVCARLGDVDAG-EWIHSYADGKGLLRKVISVGNSLVDFYCKCGNLEAAWK 297
Query: 263 LMKSMHEPHAGAWGALLGACKLHGDSDLGEIVANQLFE 300
+ M + + +W A++ L+G +LG +LFE
Sbjct: 298 VFNEMTKKNVVSWNAMISGLGLNGKGELGV----ELFE 331
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 51/207 (24%), Positives = 93/207 (44%), Gaps = 42/207 (20%)
Query: 1 MPQRNVASWNAMLCGFVKDGDLSSARGVFDAMPE-------------------------- 34
M QR+V SWN M+ + A G+F M E
Sbjct: 200 MGQRSVVSWNLMISCLAQRKKDGEAFGIFREMLEQGFEPDDATLVTVLPVCARLGDVDAG 259
Query: 35 -------------KNVVSF-TTMIDGYAKAGDMAAARFLFEQATEKDVVAWSALISGYVQ 80
+ V+S +++D Y K G++ AA +F + T+K+VV+W+A+ISG
Sbjct: 260 EWIHSYADGKGLLRKVISVGNSLVDFYCKCGNLEAAWKVFNEMTKKNVVSWNAMISGLGL 319
Query: 81 NGQPNQALKVFLEMESKNVKPDEFILVSLMSATSQLGHLELAQWV-DSYVSKSSIDLQQD 139
NG+ +++F +M K V P + V +++ + G ++ + + DS K + + +
Sbjct: 320 NGKGELGVELFEKMARKGVTPSDSTFVGVLACCAHAGFVDKGREIFDSMTVKFKLSPKLE 379
Query: 140 HVIAALLDMNAKCGNMDRALKLFKEMP 166
H ++D+ +CG++ A L + MP
Sbjct: 380 HY-GCVVDLLGRCGHVKEAYDLIRNMP 405
>Medtr5g043780.1 | PPR containing plant-like protein | HC |
chr5:19239453-19241320 | 20130731
Length = 525
Score = 265 bits (676), Expect = 7e-71, Method: Compositional matrix adjust.
Identities = 139/345 (40%), Positives = 210/345 (60%), Gaps = 9/345 (2%)
Query: 8 SWNAMLCGFVKDGDLSSARGVFDAMPEKNVVSFTTMIDGYAKAGDMAAARFLFEQATEKD 67
S AM C F GD+ +AR VFD +P NVVS++ MI GYAK GD+ +AR F++A EKD
Sbjct: 147 SLMAMYCVF---GDVVAARYVFDEIPSLNVVSWSVMISGYAKVGDVDSARLFFDEAPEKD 203
Query: 68 VVAWSALISGYVQNGQPNQALKVFLEMESKNVKPDEFILVSLMSATSQLGHLELAQWVDS 127
W A+ISGYVQN ++L +F M+ ++ PDE I VS++SA + LG LE+ W+
Sbjct: 204 KGIWGAMISGYVQNSCFKESLYLFRLMQLTDIVPDESIFVSILSACAHLGALEIGVWIHQ 263
Query: 128 YVSKSSIDLQQDHVIAALLDMNAKCGNMDRALKLFKEMPKRDLVSYCSMIQGLSIHGCGE 187
++++ + + +LLDM AKCGN++ A +LF M RD+V + +MI G+++HG G+
Sbjct: 264 HLNQLKLVPLSVRLSTSLLDMYAKCGNLELAKRLFDSMNMRDVVCWNAMISGMAMHGDGK 323
Query: 188 DAVRLFNSMLMEGLVPDEVAFTIILTACSHSGLVDEGWNYFQSMKQKYGISPSPDHFACM 247
A++LF M G+ PD++ F + TACS+SG+ EG M Y I P +H+ C+
Sbjct: 324 GALKLFYDMEKVGVKPDDITFIAVFTACSYSGMAYEGLMLLDKMCSVYNIVPKSEHYGCL 383
Query: 248 VDLLSRSGHLGDAYELMKSMHEPHAG-----AWGALLGACKLHGDSDLGEIVANQLFELE 302
VDLLSR+G +A +++ + G AW A L AC HG++ L E+ A ++ +L+
Sbjct: 384 VDLLSRAGLFEEAMVMIRKITNSWNGSEETLAWRAFLSACCNHGETQLAELAAEKVLQLD 443
Query: 303 PQ-NAANYILLSNIYAAAERWIDVSLVRSRMRERSVQKIPGCSKL 346
++ Y+LLSN+YAA+ + D VR M+ + K PGCS +
Sbjct: 444 NHIHSGVYVLLSNLYAASGKHSDARRVRDMMKIKGTNKAPGCSSV 488
Score = 91.7 bits (226), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 66/259 (25%), Positives = 117/259 (45%), Gaps = 30/259 (11%)
Query: 59 LFEQATEKDVVAWSALISGYVQNGQPNQALKVFLEMESKNVKPDEFILVSLMSATSQLGH 118
+FEQ V ++ LI ++ N + AL+VF++M +KPD + + ++ A
Sbjct: 63 VFEQIQNPTVCIYNTLIKAFLVNNKFKSALQVFVKMLQSELKPDNYTIPYVLKACGTFHD 122
Query: 119 LELAQWVDSYVSKSSI--DLQQDH-----------VIAA-----------------LLDM 148
+ + Y SK + D+ + V+AA ++
Sbjct: 123 CSFGKMIHGYSSKLGLVFDIYVGNSLMAMYCVFGDVVAARYVFDEIPSLNVVSWSVMISG 182
Query: 149 NAKCGNMDRALKLFKEMPKRDLVSYCSMIQGLSIHGCGEDAVRLFNSMLMEGLVPDEVAF 208
AK G++D A F E P++D + +MI G + C ++++ LF M + +VPDE F
Sbjct: 183 YAKVGDVDSARLFFDEAPEKDKGIWGAMISGYVQNSCFKESLYLFRLMQLTDIVPDESIF 242
Query: 209 TIILTACSHSGLVDEGWNYFQSMKQKYGISPSPDHFACMVDLLSRSGHLGDAYELMKSMH 268
IL+AC+H G ++ G Q + Q + S ++D+ ++ G+L A L SM+
Sbjct: 243 VSILSACAHLGALEIGVWIHQHLNQLKLVPLSVRLSTSLLDMYAKCGNLELAKRLFDSMN 302
Query: 269 EPHAGAWGALLGACKLHGD 287
W A++ +HGD
Sbjct: 303 MRDVVCWNAMISGMAMHGD 321
>Medtr6g060510.1 | pentatricopeptide (PPR) repeat protein | HC |
chr6:20818019-20812038 | 20130731
Length = 1056
Score = 264 bits (674), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 138/345 (40%), Positives = 214/345 (62%), Gaps = 4/345 (1%)
Query: 5 NVASWNAMLCGFVKDGDLSSARGVFDAMPEKNVVSFTTMIDGYAKAGDMAAARFLFEQAT 64
NV NA++ F K G + AR VFD+ +++ S+ TMI Y +G+M A+ LF++
Sbjct: 145 NVFVVNALIGMFGKWGRVEDARNVFDSAVDRDFYSWNTMIGAYVGSGNMVLAKELFDEMH 204
Query: 65 EKDVVAWSALISGYVQNGQPNQALKVFLEMESKNVKPDEFILVSLMSATSQLGHLELAQW 124
E+DVV+WS +I+GYVQ G +AL F +M VKP+E+ +VS ++A S L L+ +W
Sbjct: 205 ERDVVSWSTIIAGYVQVGCFMEALDFFHKMLQSEVKPNEYTMVSALAACSNLVALDQGKW 264
Query: 125 VDSYVSKSSIDLQQDHVIAALLDMNAKCGNMDRALKLFKEMP-KRDLVSYCSMIQGLSIH 183
+ Y+ + +I + D ++A+L+DM AKCG +D A +F E KR + + +MI G ++H
Sbjct: 265 IHVYIRRDNIKMN-DRLLASLIDMYAKCGEIDSASSVFHEHKVKRKVWPWNAMIGGFAMH 323
Query: 184 GCGEDAVRLFNSMLMEGLVPDEVAFTIILTACSHSGLVDEGWNYFQSMKQKYGISPSPDH 243
G E+A+ +F M +E + P++V F +L ACSH +V EG +YF+ M YGI+P +H
Sbjct: 324 GKPEEAINVFEKMKVEKVSPNKVTFIALLNACSHGYMVKEGKSYFELMASDYGINPEIEH 383
Query: 244 FACMVDLLSRSGHLGDAYELMKSM-HEPHAGAWGALLGACKLHGDSDLGEIVANQLFELE 302
+ CMVDLLSRSGHL D+ E++ SM P WGALL AC+++ D + G + + E++
Sbjct: 384 YGCMVDLLSRSGHLKDSEEMILSMPMAPDVAIWGALLNACRIYKDMERGYRIGRIIKEID 443
Query: 303 PQNAANYILLSNIYAAAERWIDVSLVRSRMRERS-VQKIPGCSKL 346
P + +LL NIY+ + RW + +VR + S +KIPG S +
Sbjct: 444 PNHIGCNVLLGNIYSTSGRWNEARMVREKNEINSDRKKIPGFSSI 488
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 70/305 (22%), Positives = 133/305 (43%), Gaps = 22/305 (7%)
Query: 22 LSSARGVFDAMPEKNVVSFTTMIDGYAKAGDMAAARFLFEQATEKDVVAWSALIS----- 76
L+ A +FD +P+ ++ + TMI K+ M+ +L A + ++ S
Sbjct: 59 LTYAHKLFDQIPQPDLFIYNTMI----KSHSMSPHSYLDSIAVFRSLIRDSGYFPNRYSF 114
Query: 77 ----GYVQNGQ-PNQALKVFLEMESKNVKPDEFILVSLMSATSQLGHLELAQWVDSYVSK 131
G NG + +VF + + F++ +L+ + G +E A+ V
Sbjct: 115 VFAFGACGNGMCVREGEQVFTHAVKVGLDGNVFVVNALIGMFGKWGRVEDAR----NVFD 170
Query: 132 SSIDLQQDHVIAALLDMNAKCGNMDRALKLFKEMPKRDLVSYCSMIQGLSIHGCGEDAVR 191
S++D + + ++ GNM A +LF EM +RD+VS+ ++I G GC +A+
Sbjct: 171 SAVD-RDFYSWNTMIGAYVGSGNMVLAKELFDEMHERDVVSWSTIIAGYVQVGCFMEALD 229
Query: 192 LFNSMLMEGLVPDEVAFTIILTACSHSGLVDEGWNYFQSMKQKYGISPSPDHFACMVDLL 251
F+ ML + P+E L ACS+ +D+G + ++ I + A ++D+
Sbjct: 230 FFHKMLQSEVKPNEYTMVSALAACSNLVALDQG-KWIHVYIRRDNIKMNDRLLASLIDMY 288
Query: 252 SRSGHLGDAYELMKSMH-EPHAGAWGALLGACKLHGDSDLGEIVANQL-FELEPQNAANY 309
++ G + A + + W A++G +HG + V ++ E N +
Sbjct: 289 AKCGEIDSASSVFHEHKVKRKVWPWNAMIGGFAMHGKPEEAINVFEKMKVEKVSPNKVTF 348
Query: 310 ILLSN 314
I L N
Sbjct: 349 IALLN 353
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 49/207 (23%), Positives = 94/207 (45%), Gaps = 12/207 (5%)
Query: 98 NVKPDEFILVSLMSATSQLGHL--ELAQWVDSYVSKSSIDLQQDHVIAALLDMNAKCGNM 155
N KP ++ S +S+ L ++ Q + ++ + I L VIA N ++
Sbjct: 3 NTKPFHYVNHSKLSSLIDLCKSINQIKQTHANLITTAQITLP---VIANKFLKNVALASL 59
Query: 156 DRALKLFKEMPKRDLVSYCSMIQGLSIHGCGE-DAVRLFNSMLME-GLVPDEVAFTIILT 213
A KLF ++P+ DL Y +MI+ S+ D++ +F S++ + G P+ +F
Sbjct: 60 TYAHKLFDQIPQPDLFIYNTMIKSHSMSPHSYLDSIAVFRSLIRDSGYFPNRYSFVFAFG 119
Query: 214 ACSHSGLVDEGWNYFQSMKQKYGISPSPDHFACMVDLLSRSGHLGDAYELMKSMHEPHAG 273
AC + V EG F + K G+ + ++ + + G + DA + S +
Sbjct: 120 ACGNGMCVREGEQVF-THAVKVGLDGNVFVVNALIGMFGKWGRVEDARNVFDSAVDRDFY 178
Query: 274 AWGALLGACKLHGDSDLGEIVANQLFE 300
+W ++GA G+ ++A +LF+
Sbjct: 179 SWNTMIGAYVGSGNM----VLAKELFD 201
>Medtr1g037590.1 | pentatricopeptide (PPR) repeat protein | HC |
chr1:13924435-13921068 | 20130731
Length = 598
Score = 263 bits (671), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 127/348 (36%), Positives = 218/348 (62%), Gaps = 5/348 (1%)
Query: 1 MPQRNVASWNAMLCGFVKDGDLSSARGVFDAMPEKNVVSFTTMIDGYAKAGDMAAARFLF 60
MP RNV SWNAM+ G+ ++G A +F+ MPE+++ S+ TM+ G+ + GD+ A LF
Sbjct: 183 MPIRNVVSWNAMIAGYAQNGRFDEALKLFERMPERDMPSWNTMVTGFIQNGDLNRAEKLF 242
Query: 61 EQATEKDVVAWSALISGYVQNGQPNQALKVFLEMESKN-VKPDEFILVSLMSATSQLGHL 119
+K+V+ W+A+++GYVQ+G +ALK+F +M++ + +KP V+++ A S L L
Sbjct: 243 HAMPKKNVITWTAMMTGYVQHGLSEEALKLFNKMQANDGLKPTTGTFVTVLGACSDLAGL 302
Query: 120 ELAQWVDSYVSKSSIDLQQDHVIAALLDMNAKCGNMDRALKLFKE--MPKRDLVSYCSMI 177
Q + +SK+ + +V++AL++M +KCG+ A K+F + DL+++ MI
Sbjct: 303 PEGQQIHQMISKTVFQ-ESTYVVSALINMYSKCGDFHVAKKMFDDGLSGHMDLIAWNGMI 361
Query: 178 QGLSIHGCGEDAVRLFNSMLMEGLVPDEVAFTIILTACSHSGLVDEGWNYFQSMKQKYGI 237
+ HG G +A+ LFN M G ++V + +LTACSH+GL DEG+ YF + + +
Sbjct: 362 AAYAHHGYGNEAIILFNKMQELGFQANDVTYVGLLTACSHAGLFDEGFKYFDELLKNRYM 421
Query: 238 SPSPDHFACMVDLLSRSGHLGDAYELMKSM-HEPHAGAWGALLGACKLHGDSDLGEIVAN 296
DH+ C++DL R+G L +A +++ + E WGALL C +HG++D+G +VA+
Sbjct: 422 QVREDHYTCLIDLCGRAGRLDEALNIIEGLGKEVSLSVWGALLAGCSVHGNADIGRLVAD 481
Query: 297 QLFELEPQNAANYILLSNIYAAAERWIDVSLVRSRMRERSVQKIPGCS 344
++ ++EP+NA Y+L SN+YA+ + + VR +M+++ ++K PGCS
Sbjct: 482 KVLKMEPENADTYLLASNMYASVGMREEAANVRMKMKDKGLKKQPGCS 529
Score = 140 bits (353), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 95/316 (30%), Positives = 159/316 (50%), Gaps = 14/316 (4%)
Query: 1 MPQRNVASWNAMLCGFVKDGDLSSARGVFDAMPEKNVVSFTTMIDGYAKAGDMAAARFLF 60
MP RNV SWN M+ G+ ++G A +F MPE+NVVS+ T++ A G + A LF
Sbjct: 90 MPVRNVVSWNTMIDGYARNGRTQEAMDLFGRMPERNVVSWNTVMTALAHCGRIDDAERLF 149
Query: 61 EQATEKDVVAWSALISGYVQNGQPNQALKVFLEMESKNVKPDEFILVSLMSATSQLGHLE 120
+ E+DVV+W+ +++G +NG+ + A VF M +NV ++++ +Q G +
Sbjct: 150 NEMRERDVVSWTTMVAGLSKNGRVDDARDVFDRMPIRNVVS----WNAMIAGYAQNGRFD 205
Query: 121 LAQWVDSYVSKSSIDLQQDHVIAALLDMNAKCGNMDRALKLFKEMPKRDLVSYCSMIQGL 180
A + + D+ + + N G+++RA KLF MPK++++++ +M+ G
Sbjct: 206 EA--LKLFERMPERDMPSWNTMVTGFIQN---GDLNRAEKLFHAMPKKNVITWTAMMTGY 260
Query: 181 SIHGCGEDAVRLFNSMLM-EGLVPDEVAFTIILTACSHSGLVDEGWNYFQSMKQKYGISP 239
HG E+A++LFN M +GL P F +L ACS + EG Q M K
Sbjct: 261 VQHGLSEEALKLFNKMQANDGLKPTTGTFVTVLGACSDLAGLPEGQQIHQ-MISKTVFQE 319
Query: 240 SPDHFACMVDLLSRSGHLGDAYELMKSMHEPHAG--AWGALLGACKLHGDSDLGEIVANQ 297
S + ++++ S+ G A ++ H AW ++ A HG + I+ N+
Sbjct: 320 STYVVSALINMYSKCGDFHVAKKMFDDGLSGHMDLIAWNGMIAAYAHHGYGNEAIILFNK 379
Query: 298 LFELEPQ-NAANYILL 312
+ EL Q N Y+ L
Sbjct: 380 MQELGFQANDVTYVGL 395
Score = 119 bits (297), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 82/281 (29%), Positives = 150/281 (53%), Gaps = 19/281 (6%)
Query: 10 NAMLCGFVKDGDLSSARGVFDAMPEKNVVSFTTMIDGYAKAGDMAAARFLFEQA-TEKDV 68
N + ++G ++ AR VFD M E++ +TTMI GY K G + AR LF++ EK V
Sbjct: 5 NYFISKLCREGQINEARKVFDEMSERDSCLWTTMISGYIKCGLINEARKLFDRLDAEKSV 64
Query: 69 VAWSALISGYVQNGQPNQALKVFLEMESKNVKPDEFILVSLMSATSQLGHLELAQWVDSY 128
+ W+A++SGY++ + +A ++F EM +NV +++ ++ G + A +
Sbjct: 65 IVWTAMVSGYIKINRIEEAERLFNEMPVRNVVS----WNTMIDGYARNGRTQEAMDLFGR 120
Query: 129 VSKSSIDLQQDHVIAALLDMNAKCGNMDRALKLFKEMPKRDLVSYCSMIQGLSIHGCGED 188
+ + ++ + + V+ AL A CG +D A +LF EM +RD+VS+ +M+ GLS +G +D
Sbjct: 121 MPERNV-VSWNTVMTAL----AHCGRIDDAERLFNEMRERDVVSWTTMVAGLSKNGRVDD 175
Query: 189 AVRLFNSMLMEGLVPDEVAFTIILTACSHSGLVDEGWNYFQSMKQKYGISPSPDHFACMV 248
A +F+ M + + V++ ++ + +G DE F+ M ++ PS + MV
Sbjct: 176 ARDVFDRMPIRNV----VSWNAMIAGYAQNGRFDEALKLFERMPER--DMPS---WNTMV 226
Query: 249 DLLSRSGHLGDAYELMKSMHEPHAGAWGALLGACKLHGDSD 289
++G L A +L +M + + W A++ HG S+
Sbjct: 227 TGFIQNGDLNRAEKLFHAMPKKNVITWTAMMTGYVQHGLSE 267
>Medtr3g052720.1 | organelle transcript processing protein, putative
| HC | chr3:20868148-20864227 | 20130731
Length = 1150
Score = 261 bits (667), Expect = 7e-70, Method: Compositional matrix adjust.
Identities = 135/347 (38%), Positives = 221/347 (63%), Gaps = 6/347 (1%)
Query: 3 QRNVASWNAMLCGFVKDGDLSSARGVFDAMPEKNVVSFTTMIDGYAKAGDMAAARFLFEQ 62
Q V+ NA++ + G++ A+ +F ++VS+ +MI GY G + A+ LF+
Sbjct: 340 QDYVSLQNALIHLYSNCGEILDAQKIFSGGVLLDLVSWNSMISGYLMCGYVEDAKKLFDS 399
Query: 63 ATEKDVVAWSALISGYVQNGQPNQALKVFLEMESKNVKPDEFILVSLMSATSQLGHLELA 122
EKDVV+WSA+ISGY Q+G ++A+ +F EM+ ++PDE +VS++SA + + L+L
Sbjct: 400 MVEKDVVSWSAMISGYAQHGCFSEAVALFQEMQLLGIRPDETAIVSVISACTHMAALDLG 459
Query: 123 QWVDSYVSKSSIDLQQDHVI--AALLDMNAKCGNMDRALKLFKEMPKRDLVSYCSMIQGL 180
+W+ +Y+SK+ ++ +VI L+DM KCG ++ AL++F M ++ + ++ ++I GL
Sbjct: 460 KWIHAYISKNEFNV---NVILGTTLVDMYMKCGCVENALEVFYAMEEKGVSTWNALILGL 516
Query: 181 SIHGCGEDAVRLFNSMLMEGLVPDEVAFTIILTACSHSGLVDEGWNYFQSMKQKYGISPS 240
+++G E ++ +F M +P+E+ F +L AC H GLVDEG YF SM Q++ I P+
Sbjct: 517 AMNGLVEKSLNVFADMKKTKTLPNEITFMGVLGACRHMGLVDEGRRYFSSMTQEHKIEPN 576
Query: 241 PDHFACMVDLLSRSGHLGDAYELMKSM-HEPHAGAWGALLGACKLHGDSDLGEIVANQLF 299
H+ CMVDLL R+G L +A EL++SM P WGALLGAC+ H ++++GE + +L
Sbjct: 577 VKHYGCMVDLLGRAGLLKEAEELIESMPMAPDVATWGALLGACRKHHNNEMGERLGRKLI 636
Query: 300 ELEPQNAANYILLSNIYAAAERWIDVSLVRSRMRERSVQKIPGCSKL 346
+L+P + ++LLSNIYA+ W DV +R M + V K+PGCS +
Sbjct: 637 QLQPDHDGFHVLLSNIYASKGNWGDVLEIRGIMAQHGVVKMPGCSMI 683
Score = 150 bits (379), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 99/313 (31%), Positives = 163/313 (52%), Gaps = 33/313 (10%)
Query: 5 NVASWNAMLCGFVKDGDLSSARGVFDAMPEKNVVSFTTMIDGYAKAGDMAAARFLFEQAT 64
++ SWN +L G+V GD+ A V+D MP +N ++ +MI + K G +A AR LF++
Sbjct: 210 DLVSWNTLLAGYVNLGDVVEAECVYDKMPVRNTIASNSMIVLFGKEGCIAKARSLFDRIE 269
Query: 65 EKDVVAWSALISGYVQNGQPNQALKVFLEMESKNVKPDEFILVSLMSATSQLGHLELAQW 124
KD+V+WSA+IS Y QNG +AL +F++M + V DE ++VS +SA + L + + +
Sbjct: 270 GKDMVSWSAMISCYEQNGMCEEALVLFVDMNANGVMVDEVVVVSAISACTSLSAVRMGRS 329
Query: 125 VDSYVSKSSI---------------------DLQQDHVIAALLDMNA---------KCGN 154
V +K I D Q+ LLD+ + CG
Sbjct: 330 VHGLAAKIGIQDYVSLQNALIHLYSNCGEILDAQKIFSGGVLLDLVSWNSMISGYLMCGY 389
Query: 155 MDRALKLFKEMPKRDLVSYCSMIQGLSIHGCGEDAVRLFNSMLMEGLVPDEVAFTIILTA 214
++ A KLF M ++D+VS+ +MI G + HGC +AV LF M + G+ PDE A +++A
Sbjct: 390 VEDAKKLFDSMVEKDVVSWSAMISGYAQHGCFSEAVALFQEMQLLGIRPDETAIVSVISA 449
Query: 215 CSHSGLVDEG-WNYFQSMKQKYGISPSPDHFACMVDLLSRSGHLGDAYELMKSMHEPHAG 273
C+H +D G W + K ++ ++ +VD+ + G + +A E+ +M E
Sbjct: 450 CTHMAALDLGKWIHAYISKNEFNVNVILG--TTLVDMYMKCGCVENALEVFYAMEEKGVS 507
Query: 274 AWGALLGACKLHG 286
W AL+ ++G
Sbjct: 508 TWNALILGLAMNG 520
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 54/231 (23%), Positives = 97/231 (41%), Gaps = 41/231 (17%)
Query: 34 EKNVVSFTTMIDGYAKAGDMAAARFLFEQATEKDVVAWSALISGYVQNGQPNQALKVFLE 93
+ +V T+I+ YA G+M +A +F+++ D+V+W+ L++GYV G +A V+ +
Sbjct: 177 DSDVYVRNTLINLYAVCGNMVSAHKVFKESVVLDLVSWNTLLAGYVNLGDVVEAECVYDK 236
Query: 94 MESKNVKPDEFILVSLMSATSQLGHLELAQWVDSYVSKSSIDLQQDHVIAALLDMNAKCG 153
M +N ++V + K G
Sbjct: 237 MPVRNTIASNSMIV----------------------------------------LFGKEG 256
Query: 154 NMDRALKLFKEMPKRDLVSYCSMIQGLSIHGCGEDAVRLFNSMLMEGLVPDEVAFTIILT 213
+ +A LF + +D+VS+ +MI +G E+A+ LF M G++ DEV ++
Sbjct: 257 CIAKARSLFDRIEGKDMVSWSAMISCYEQNGMCEEALVLFVDMNANGVMVDEVVVVSAIS 316
Query: 214 ACSHSGLVDEGWNYFQSMKQKYGISPSPDHFACMVDLLSRSGHLGDAYELM 264
AC+ V G + K GI ++ L S G + DA ++
Sbjct: 317 ACTSLSAVRMG-RSVHGLAAKIGIQDYVSLQNALIHLYSNCGEILDAQKIF 366
>Medtr3g098230.1 | PPR containing plant-like protein | HC |
chr3:44828973-44831769 | 20130731
Length = 873
Score = 261 bits (667), Expect = 7e-70, Method: Compositional matrix adjust.
Identities = 131/337 (38%), Positives = 209/337 (62%), Gaps = 4/337 (1%)
Query: 10 NAMLCGFVKDGDLSSARGVFDAMPEK-NVVSFTTMIDGYAKAGDMAAARFLFEQATEKDV 68
NA+L + K G++ A +F + EK N+V+ ++I GY G A +F +E D+
Sbjct: 498 NAILDAYSKCGNIEYANKMFQNLSEKRNLVTCNSLISGYVGLGSHYDANMIFSGMSETDL 557
Query: 69 VAWSALISGYVQNGQPNQALKVFLEMESKNVKPDEFILVSLMSATSQLGHLELAQWVDSY 128
W+ ++ Y +N P QAL++FL+++++ +KPD ++SL+ +Q+ + L + Y
Sbjct: 558 TTWNLMVRVYAENDCPEQALELFLKLQTQGMKPDVVTIMSLIPVCTQMASVHLLRQCHGY 617
Query: 129 VSKSSIDLQQDHVIAALLDMNAKCGNMDRALKLFKEMPKRDLVSYCSMIQGLSIHGCGED 188
+ +SS + H+ LLD AKCG + A K+F+ +DLV + +MI G ++HG E
Sbjct: 618 IIRSS--FEDLHLKGTLLDAYAKCGIIGYAYKIFQSSVDKDLVMFTAMIGGYAMHGMSEK 675
Query: 189 AVRLFNSMLMEGLVPDEVAFTIILTACSHSGLVDEGWNYFQSMKQKYGISPSPDHFACMV 248
A+ F+ ML G+ PD V FT IL+ACSH+G + EG F S+++ +G+ P+ + FAC+V
Sbjct: 676 ALETFSHMLNMGIKPDHVIFTSILSACSHAGRIAEGLKIFDSIEKIHGMKPTIEQFACVV 735
Query: 249 DLLSRSGHLGDAYELMKSMH-EPHAGAWGALLGACKLHGDSDLGEIVANQLFELEPQNAA 307
DLL+R GH+ +AY + + E +A WG LLGACK + + +LG IVA++LF++E +
Sbjct: 736 DLLARGGHVSEAYSFVTKIPIEANANIWGTLLGACKTYHEVELGRIVADKLFKIEANDIG 795
Query: 308 NYILLSNIYAAAERWIDVSLVRSRMRERSVQKIPGCS 344
NYI+LSN+YAA +RW V VR MR + ++K GCS
Sbjct: 796 NYIVLSNLYAADDRWDGVMEVRKMMRNKDLKKPAGCS 832
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 72/320 (22%), Positives = 133/320 (41%), Gaps = 60/320 (18%)
Query: 3 QRNVASWNAMLCGFVKDGDLSSARGVFDAM------------------------------ 32
++V SWNAM+ G ++G L A +F M
Sbjct: 210 HKDVVSWNAMIAGLAENGLLKEAFSLFSLMMKGSVKPNYATVANILPVCASFDENIAHRC 269
Query: 33 -----------PE--KNVVSFTTMIDGYAKAGDMAAARFLFEQATEKDVVAWSALISGYV 79
PE +V ++ Y K G A LF +D+V+W+ +I+GY
Sbjct: 270 GRQIHSYVLQWPELSADVSVCNALLSFYLKVGRTKEAESLFWAMDARDLVSWNTIIAGYA 329
Query: 80 QNGQPNQALKVFLEMES-KNVKPDEFILVSLMSATSQLGHLELAQWVDSYVSKSSIDLQQ 138
NG+ ++L VF + S + + D +VS++ A +QL +L+ + V +Y+ + +
Sbjct: 330 LNGEWLKSLHVFGNLVSLEMLLLDSVTMVSILPACAQLDNLQAGKQVHAYILRHPFLFED 389
Query: 139 DHVIAALLDMNAKCGNMDRALKLFKEMPKRDLVSYCSMIQGLSIHGCGEDAVRLFNSMLM 198
AL+ AKCG ++ A F + ++DL+S+ S++ + L + ML
Sbjct: 390 TSAGNALVSFYAKCGYIEEAYHTFSMISRKDLISWNSILDAFGEKRHHSRFLSLLHVMLK 449
Query: 199 EGLVPDEVAFTIILTACSHSGLVDEGWNYFQSMKQKYGISPSPDHFAC---------MVD 249
+ PD V I+ C+ V + +K+ +G S C ++D
Sbjct: 450 LDIRPDSVTILTIIHFCASLLRV-------KKVKEIHGYSIRSGSLLCATAPTVGNAILD 502
Query: 250 LLSRSGHLGDAYELMKSMHE 269
S+ G++ A ++ +++ E
Sbjct: 503 AYSKCGNIEYANKMFQNLSE 522
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 69/275 (25%), Positives = 128/275 (46%), Gaps = 13/275 (4%)
Query: 18 KDGDLSSARGVFDAMP----EKNVVSFTTMIDGYAKAGDMAA-ARFLFEQATEKDVVAWS 72
+ G+L+ + V + E + + ++ YAK G +A A +F+ KDVV+W+
Sbjct: 158 RSGNLNGGKSVHGYVIKSGFEMDTFAGNALVSMYAKCGLVACDAYAVFDSIIHKDVVSWN 217
Query: 73 ALISGYVQNGQPNQALKVFLEMESKNVKPDEFILVSLM----SATSQLGHLELAQWVDSY 128
A+I+G +NG +A +F M +VKP+ + +++ S + H + + SY
Sbjct: 218 AMIAGLAENGLLKEAFSLFSLMMKGSVKPNYATVANILPVCASFDENIAH-RCGRQIHSY 276
Query: 129 VSKSSIDLQQD-HVIAALLDMNAKCGNMDRALKLFKEMPKRDLVSYCSMIQGLSIHGCGE 187
V + +L D V ALL K G A LF M RDLVS+ ++I G +++G
Sbjct: 277 VLQWP-ELSADVSVCNALLSFYLKVGRTKEAESLFWAMDARDLVSWNTIIAGYALNGEWL 335
Query: 188 DAVRLFNSML-MEGLVPDEVAFTIILTACSHSGLVDEGWNYFQSMKQKYGISPSPDHFAC 246
++ +F +++ +E L+ D V IL AC+ + G + + +
Sbjct: 336 KSLHVFGNLVSLEMLLLDSVTMVSILPACAQLDNLQAGKQVHAYILRHPFLFEDTSAGNA 395
Query: 247 MVDLLSRSGHLGDAYELMKSMHEPHAGAWGALLGA 281
+V ++ G++ +AY + +W ++L A
Sbjct: 396 LVSFYAKCGYIEEAYHTFSMISRKDLISWNSILDA 430
Score = 75.5 bits (184), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 54/182 (29%), Positives = 95/182 (52%), Gaps = 4/182 (2%)
Query: 38 VSFTTMIDGYAKAGDMAAARFLFEQATEKDVVAWSALISGYVQNGQPN-QALKVFLEMES 96
V+ +++ YAK G + LF+Q D V W+ ++SGY ++G+ + +KVF M S
Sbjct: 79 VTSKALLNMYAKCGMLDDCHKLFDQFGRCDPVIWNIVLSGYSRSGKNDADVMKVFRAMHS 138
Query: 97 K-NVKPDEFILVSLMSATSQLGHLELAQWVDSYVSKSSIDLQQDHVIAALLDMNAKCGNM 155
V P + +++ ++ G+L + V YV KS ++ AL+ M AKCG +
Sbjct: 139 SGEVMPSSVTIATVLPVCARSGNLNGGKSVHGYVIKSGFEMDT-FAGNALVSMYAKCGLV 197
Query: 156 D-RALKLFKEMPKRDLVSYCSMIQGLSIHGCGEDAVRLFNSMLMEGLVPDEVAFTIILTA 214
A +F + +D+VS+ +MI GL+ +G ++A LF+ M+ + P+ IL
Sbjct: 198 ACDAYAVFDSIIHKDVVSWNAMIAGLAENGLLKEAFSLFSLMMKGSVKPNYATVANILPV 257
Query: 215 CS 216
C+
Sbjct: 258 CA 259
Score = 68.6 bits (166), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 73/265 (27%), Positives = 123/265 (46%), Gaps = 27/265 (10%)
Query: 65 EKDVVAWSALISGYVQNGQPNQALKVFLEM--ESKNVKPDEFILVSLMSATSQLGHLELA 122
+++ + W++ I + + N+AL F +S KPD +L +++ + S L L
Sbjct: 3 QRNFMTWASTIRSLCVDSRHNEALSFFHHCLKDSAAFKPDHEVLAAILKSCSALLASNLG 62
Query: 123 QWVDSYVSKSSIDLQQDHVIA-----ALLDMNAKCGNMDRALKLFKEMPKRDLVSYCSMI 177
+ + SYV K Q HV ALL+M AKCG +D KLF + + D V + ++
Sbjct: 63 KCLHSYVVK------QGHVSCHVTSKALLNMYAKCGMLDDCHKLFDQFGRCDPVIWNIVL 116
Query: 178 QGLSIHGCGE-DAVRLFNSMLMEG-LVPDEVAFTIILTACSHSGLVDEGWNYFQSMKQKY 235
G S G + D +++F +M G ++P V +L C+ SG ++ G K
Sbjct: 117 SGYSRSGKNDADVMKVFRAMHSSGEVMPSSVTIATVLPVCARSGNLNGG-KSVHGYVIKS 175
Query: 236 GISPSPDHFA--CMVDLLSRSGHLG-DAYELMKSMHEPHAGAWGALLGACKLHGDSDLGE 292
G D FA +V + ++ G + DAY + S+ +W A++ L + L E
Sbjct: 176 GF--EMDTFAGNALVSMYAKCGLVACDAYAVFDSIIHKDVVSWNAMIAG--LAENGLLKE 231
Query: 293 IVANQLFELEPQNAA--NYILLSNI 315
A LF L + + NY ++NI
Sbjct: 232 --AFSLFSLMMKGSVKPNYATVANI 254
>Medtr7g089260.1 | pentatricopeptide (PPR) repeat protein | HC |
chr7:34908078-34912174 | 20130731
Length = 1099
Score = 261 bits (666), Expect = 9e-70, Method: Compositional matrix adjust.
Identities = 140/388 (36%), Positives = 223/388 (57%), Gaps = 43/388 (11%)
Query: 1 MPQRNVASWNAMLCGFVKDGDLSSARGVFDAMP--------------------------- 33
M R++ SWN+++ + ++ D S+A F M
Sbjct: 283 MEVRDLVSWNSIIAAYEQNNDPSTALRFFKGMQLGGIRPDLLTVVSLTSIFSQLSDQRIS 342
Query: 34 -------------EKNVVSFTTMIDGYAKAGDMAAARFLFEQATEKDVVAWSALISGYVQ 80
+K+VV +++ YAK G M A +F+Q KD ++W+ L++GY Q
Sbjct: 343 RSILGFVIRREWLDKDVVIGNALVNMYAKLGYMNCAHTVFDQLPRKDTISWNTLVTGYTQ 402
Query: 81 NGQPNQALKVFLEMES-KNVKPDEFILVSLMSATSQLGHLELAQWVDSYVSKSSIDLQQD 139
NG ++A+ + ME ++ P++ VS++ A S +G L+ + + + K+S+ L
Sbjct: 403 NGLASEAIDAYNMMEECRDTIPNQGTWVSIIPAYSHVGALQQGMKIHAKLIKNSLYLDV- 461
Query: 140 HVIAALLDMNAKCGNMDRALKLFKEMPKRDLVSYCSMIQGLSIHGCGEDAVRLFNSMLME 199
V L+D+ KCG ++ A+ LF E+P+ V + ++I L IHG GE+A++LF ML E
Sbjct: 462 FVATCLIDLYGKCGRLEDAMSLFYEIPRDTSVPWNAIIASLGIHGRGEEALQLFKDMLAE 521
Query: 200 GLVPDEVAFTIILTACSHSGLVDEGWNYFQSMKQKYGISPSPDHFACMVDLLSRSGHLGD 259
+ D + F +L+ACSHSGLVDEG F M+++YGI PS H+ CMVDLL R+G+L
Sbjct: 522 RVKADHITFVSLLSACSHSGLVDEGQKCFDIMQKEYGIKPSLKHYGCMVDLLGRAGYLEK 581
Query: 260 AYELMKSMH-EPHAGAWGALLGACKLHGDSDLGEIVANQLFELEPQNAANYILLSNIYAA 318
AYEL+++M +P A WGALL ACK++G+++LG + +++L E++ +N Y+LLSNIYA
Sbjct: 582 AYELVRNMPIQPDASIWGALLSACKIYGNAELGTLASDRLLEVDSENVGYYVLLSNIYAN 641
Query: 319 AERWIDVSLVRSRMRERSVQKIPGCSKL 346
E+W V VRS R+R ++K PG S +
Sbjct: 642 TEKWEGVIKVRSLARDRGLRKTPGWSSV 669
Score = 136 bits (342), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 96/363 (26%), Positives = 177/363 (48%), Gaps = 53/363 (14%)
Query: 1 MPQRNVASWNAMLCGFVKDGDLSSARGVFDAMP--------------------------- 33
MP ++V SWNAM+ GF ++G+ + A GV + M
Sbjct: 182 MPVKDVGSWNAMISGFCQNGNAAGALGVLNRMKGEGVKMDTITVASILPVCAQSDDVING 241
Query: 34 ------------EKNVVSFTTMIDGYAKAGDMAAARFLFEQATEKDVVAWSALISGYVQN 81
+ +V +I+ Y+K G + A+ +F+Q +D+V+W+++I+ Y QN
Sbjct: 242 VLIHLHVLKHGLDSDVFVSNALINMYSKFGRLQDAQMVFDQMEVRDLVSWNSIIAAYEQN 301
Query: 82 GQPNQALKVFLEMESKNVKPDEFILVSLMSATSQLGHLELAQWVDSYVSKSSIDLQQDHV 141
P+ AL+ F M+ ++PD +VSL S SQL +++ + +V + L +D V
Sbjct: 302 NDPSTALRFFKGMQLGGIRPDLLTVVSLTSIFSQLSDQRISRSILGFVIRREW-LDKDVV 360
Query: 142 IA-ALLDMNAKCGNMDRALKLFKEMPKRDLVSYCSMIQGLSIHGCGEDAVRLFNSM-LME 199
I AL++M AK G M+ A +F ++P++D +S+ +++ G + +G +A+ +N M
Sbjct: 361 IGNALVNMYAKLGYMNCAHTVFDQLPRKDTISWNTLVTGYTQNGLASEAIDAYNMMEECR 420
Query: 200 GLVPDEVAFTIILTACSHSGLVDEGWNYFQSMKQKYGISPSPDHF--ACMVDLLSRSGHL 257
+P++ + I+ A SH G + +G + + S D F C++DL + G L
Sbjct: 421 DTIPNQGTWVSIIPAYSHVGALQQGMKIHAKLIKN---SLYLDVFVATCLIDLYGKCGRL 477
Query: 258 GDAYELMKSMHEPHAGAWGALLGACKLHGDSDLGEIVANQLFE--LEPQNAANYILLSNI 315
DA L + + W A++ + +HG + A QLF+ L + A++I ++
Sbjct: 478 EDAMSLFYEIPRDTSVPWNAIIASLGIHGRGE----EALQLFKDMLAERVKADHITFVSL 533
Query: 316 YAA 318
+A
Sbjct: 534 LSA 536
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 62/258 (24%), Positives = 126/258 (48%), Gaps = 11/258 (4%)
Query: 35 KNVVSFTTMIDGYAKAGDMAAARFLFEQATEKDVVAWSALISGYVQNGQPNQALKVFLEM 94
+N+V T +I+ Y GD++ +R F+ +K++ +W+++IS YV+ G+ ++A+ ++
Sbjct: 52 QNIVLSTKLINLYVTHGDISLSRSTFDYIHKKNIFSWNSIISAYVRFGKYHEAMNCVNQL 111
Query: 95 ESK----NVKPDEFILVSLMSATSQLGHLELAQWVDSYVSKSSIDLQQDHVIAA-LLDMN 149
S +++PD + ++ A + L + + + D +AA L+ +
Sbjct: 112 FSMCGGGHLRPDFYTFPPILKAC-----VSLVDGKKVHCCVFKMGFEDDVFVAASLVHLY 166
Query: 150 AKCGNMDRALKLFKEMPKRDLVSYCSMIQGLSIHGCGEDAVRLFNSMLMEGLVPDEVAFT 209
++ G +D A K+F +MP +D+ S+ +MI G +G A+ + N M EG+ D +
Sbjct: 167 SRYGVLDVAHKVFVDMPVKDVGSWNAMISGFCQNGNAAGALGVLNRMKGEGVKMDTITVA 226
Query: 210 IILTACSHSGLVDEGWNYFQSMKQKYGISPSPDHFACMVDLLSRSGHLGDAYELMKSMHE 269
IL C+ S V G K+G+ ++++ S+ G L DA + M
Sbjct: 227 SILPVCAQSDDVINGV-LIHLHVLKHGLDSDVFVSNALINMYSKFGRLQDAQMVFDQMEV 285
Query: 270 PHAGAWGALLGACKLHGD 287
+W +++ A + + D
Sbjct: 286 RDLVSWNSIIAAYEQNND 303
Score = 79.3 bits (194), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 58/196 (29%), Positives = 95/196 (48%), Gaps = 3/196 (1%)
Query: 28 VFDAMPEKNVVSFTTMIDGYAKAGDMAAARFLFEQATEKDVVAWSALISGYVQNGQPNQA 87
VF E +V +++ Y++ G + A +F KDV +W+A+ISG+ QNG A
Sbjct: 147 VFKMGFEDDVFVAASLVHLYSRYGVLDVAHKVFVDMPVKDVGSWNAMISGFCQNGNAAGA 206
Query: 88 LKVFLEMESKNVKPDEFILVSLMSATSQLGHLELAQWVDSYVSKSSIDLQQDHVIAALLD 147
L V M+ + VK D + S++ +Q + + +V K +D V AL++
Sbjct: 207 LGVLNRMKGEGVKMDTITVASILPVCAQSDDVINGVLIHLHVLKHGLD-SDVFVSNALIN 265
Query: 148 MNAKCGNMDRALKLFKEMPKRDLVSYCSMIQGLSIHGCGEDAVRLFNSMLMEGLVPDEVA 207
M +K G + A +F +M RDLVS+ S+I + A+R F M + G+ PD
Sbjct: 266 MYSKFGRLQDAQMVFDQMEVRDLVSWNSIIAAYEQNNDPSTALRFFKGMQLGGIRPD--L 323
Query: 208 FTIILTACSHSGLVDE 223
T++ S L D+
Sbjct: 324 LTVVSLTSIFSQLSDQ 339
>Medtr7g032360.1 | PPR containing plant-like protein | HC |
chr7:11369613-11371524 | 20130731
Length = 541
Score = 260 bits (664), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 135/342 (39%), Positives = 220/342 (64%), Gaps = 9/342 (2%)
Query: 10 NAMLCGFVKDGDLSSARGVFDAMPEKNVVSFTTMIDGYAKAGDMAAARFLFEQATEKDVV 69
N+++ F+ G +AR VFD M ++VVS+ +M+ GY + G++ A LF + ++++
Sbjct: 168 NSLISLFMNFGLSKNARKVFDEMFVRDVVSWNSMVVGYLRNGEVEMALNLFRKMNGRNII 227
Query: 70 AWSALISGYVQNGQPNQALKVFLEMESKN----VKPDEFILVSLMSATSQLGHLELAQWV 125
W+++I+G VQ G ++L++F EM+ + VKPD+ + S++SA + LG ++ +WV
Sbjct: 228 TWNSIITGLVQAGHAKESLEIFHEMQFLSGDDVVKPDKITIASVLSACALLGSIDHGKWV 287
Query: 126 DSYVSKSSIDLQQDHVI-AALLDMNAKCGNMDRALKLFKEMPKRDLVSYCSMIQGLSIHG 184
+Y+ K+ D++ D VI AL++M KCG++ +A+++F +MP++D ++ +MI ++HG
Sbjct: 288 HAYLRKN--DIECDVVIGTALVNMYGKCGDVQQAIEIFNDMPEKDASAWTAMISVFALHG 345
Query: 185 CGEDAVRLFNSMLMEGLVPDEVAFTIILTACSHSGLVDEGWNYFQSMKQKYGISPSPDHF 244
G+ A F M G+ P+ V F +L+ACSHSGLV++G F MK+ Y I P H+
Sbjct: 346 FGKKAFDCFLEMEKAGVKPNHVTFVGLLSACSHSGLVEQGRCCFDVMKRVYSIEPQIYHY 405
Query: 245 ACMVDLLSRSGHLGDAYELMKSM-HEPHAGAWGALLGACKLHGDSDLGEIVANQLFELEP 303
ACMVD+LSR+ +A L++SM +P WGALLG C++HG+ LGE VA+ L +LEP
Sbjct: 406 ACMVDILSRARLFDEALFLIRSMPMKPDVYVWGALLGGCQMHGNIKLGEKVAHYLIDLEP 465
Query: 304 QNAANYILLSNIYAAAERWIDVSLVRSRMRERSVQ-KIPGCS 344
N A YI L +IY A ++ +R+ M+ER ++ KIPGCS
Sbjct: 466 HNHAFYINLCDIYVKAGKYDAAKRIRNSMKERGIETKIPGCS 507
Score = 82.8 bits (203), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 64/229 (27%), Positives = 101/229 (44%), Gaps = 46/229 (20%)
Query: 1 MPQRNVASWNAMLCGFVKDGDLSSARGVFDAM----------PEK--------------- 35
M RN+ +WN+++ G V+ G + +F M P+K
Sbjct: 221 MNGRNIITWNSIITGLVQAGHAKESLEIFHEMQFLSGDDVVKPDKITIASVLSACALLGS 280
Query: 36 ------------------NVVSFTTMIDGYAKAGDMAAARFLFEQATEKDVVAWSALISG 77
+VV T +++ Y K GD+ A +F EKD AW+A+IS
Sbjct: 281 IDHGKWVHAYLRKNDIECDVVIGTALVNMYGKCGDVQQAIEIFNDMPEKDASAWTAMISV 340
Query: 78 YVQNGQPNQALKVFLEMESKNVKPDEFILVSLMSATSQLGHLELAQ-WVDSYVSKSSIDL 136
+ +G +A FLEME VKP+ V L+SA S G +E + D SI+
Sbjct: 341 FALHGFGKKAFDCFLEMEKAGVKPNHVTFVGLLSACSHSGLVEQGRCCFDVMKRVYSIEP 400
Query: 137 QQDHVIAALLDMNAKCGNMDRALKLFKEMP-KRDLVSYCSMIQGLSIHG 184
Q H A ++D+ ++ D AL L + MP K D+ + +++ G +HG
Sbjct: 401 QIYHY-ACMVDILSRARLFDEALFLIRSMPMKPDVYVWGALLGGCQMHG 448
>Medtr3g011940.1 | pentatricopeptide (PPR) repeat protein | HC |
chr3:3127058-3124158 | 20130731
Length = 845
Score = 259 bits (663), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 130/330 (39%), Positives = 207/330 (62%), Gaps = 6/330 (1%)
Query: 20 GDLSSARGVFDAMPEKN----VVSFTTMIDGYAKAGDMAAARFLFEQATEKDVVAWSALI 75
GDL R V + +K V +++ Y+K + A +FE +K V W+A+I
Sbjct: 334 GDLERGRFVHKLVLQKKLDFEVPVMNSLLSMYSKCKRVDLAASIFENLKKKTNVTWNAMI 393
Query: 76 SGYVQNGQPNQALKVFLEMESKNVKPDEFILVSLMSATSQLGHLELAQWVDSYVSKSSID 135
GY QNG N+AL +F M+S+ VKPD F LV++++A + L +A+W+ ++ +D
Sbjct: 394 LGYAQNGCVNEALYLFCVMQSQEVKPDCFTLVAVITALADLSVNRMAKWIHGLAIRTFMD 453
Query: 136 LQQDHVIAALLDMNAKCGNMDRALKLFKEMPKRDLVSYCSMIQGLSIHGCGEDAVRLFNS 195
+V AL+DM AKCG A KLF M +R ++++ +MI G HG G++A+ +F++
Sbjct: 454 -NDVYVATALIDMYAKCGATQTARKLFDMMHERHVITWNAMIDGYGTHGLGKEAIDIFDN 512
Query: 196 MLMEGLVPDEVAFTIILTACSHSGLVDEGWNYFQSMKQKYGISPSPDHFACMVDLLSRSG 255
M E ++P++ F +++ACSHSG V+EG ++FQSMK+ YG+ PS DH++ +VDLL R+G
Sbjct: 513 MQKEAVIPNDTTFLSVISACSHSGFVEEGLHFFQSMKEDYGLEPSMDHYSAVVDLLGRAG 572
Query: 256 HLGDAYELMKSMH-EPHAGAWGALLGACKLHGDSDLGEIVANQLFELEPQNAANYILLSN 314
L A+ L++ M +P GA+LGACK+H + +LGE A++LFEL+P ++LL+N
Sbjct: 573 KLHGAWNLIEEMPIKPGITVLGAMLGACKIHKNVELGEKAADKLFELDPDEGGYHVLLAN 632
Query: 315 IYAAAERWIDVSLVRSRMRERSVQKIPGCS 344
+Y +A W V+ VR+ M ++ + K PGCS
Sbjct: 633 MYVSASMWDKVAKVRTAMEKKGIHKTPGCS 662
Score = 110 bits (275), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 74/226 (32%), Positives = 119/226 (52%), Gaps = 7/226 (3%)
Query: 13 LCGFVKDGDLSSARGVFDAMP----EKNVVSFTTMIDGYAKAGDMAAARFLFEQATEKDV 68
LCG K +L R + + E ++ S ++ Y K G++ A +FE+ +EKD+
Sbjct: 127 LCG--KKFELEKGREIHGQVIVNGFEYDLFSMIGVMGFYVKCGEIDDAFKVFERLSEKDL 184
Query: 69 VAWSALISGYVQNGQPNQALKVFLEMESKNVKPDEFILVSLMSATSQLGHLELAQWVDSY 128
V+W++LI+GY QNG P +AL +F M+ +K D LVS++ A + + L + + + Y
Sbjct: 185 VSWTSLIAGYAQNGYPKRALDLFYRMQEAGLKADSVTLVSILPAVADIKDLRIGKSIHGY 244
Query: 129 VSKSSIDLQQDHVIAALLDMNAKCGNMDRALKLFKEMPKRDLVSYCSMIQGLSIHGCGED 188
+ + + VI ALL M +CG A +F+ M + VS+ +MI G + G E+
Sbjct: 245 ALRLGFE-SKVSVINALLYMYFECGCERIARLVFEGMINKCAVSWNTMIDGYAQIGKSEE 303
Query: 189 AVRLFNSMLMEGLVPDEVAFTIILTACSHSGLVDEGWNYFQSMKQK 234
A F ML EG+ P VA LTAC+ G ++ G + + QK
Sbjct: 304 AFATFLKMLDEGVEPTRVAIMAALTACADLGDLERGRFVHKLVLQK 349
Score = 110 bits (274), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 81/329 (24%), Positives = 146/329 (44%), Gaps = 49/329 (14%)
Query: 1 MPQRNVASWNAMLCGFVKDGDLSSARGVFDAMPEKNV----VSFTTM------------- 43
+ ++++ SW +++ G+ ++G A +F M E + V+ ++
Sbjct: 179 LSEKDLVSWTSLIAGYAQNGYPKRALDLFYRMQEAGLKADSVTLVSILPAVADIKDLRIG 238
Query: 44 --IDGYA--------------------KAGDMAAARFLFEQATEKDVVAWSALISGYVQN 81
I GYA + G AR +FE K V+W+ +I GY Q
Sbjct: 239 KSIHGYALRLGFESKVSVINALLYMYFECGCERIARLVFEGMINKCAVSWNTMIDGYAQI 298
Query: 82 GQPNQALKVFLEMESKNVKPDEFILVSLMSATSQLGHLELAQWVDSYVSKSSIDLQQDHV 141
G+ +A FL+M + V+P +++ ++A + LG LE ++V V + +D + V
Sbjct: 299 GKSEEAFATFLKMLDEGVEPTRVAIMAALTACADLGDLERGRFVHKLVLQKKLDFEVP-V 357
Query: 142 IAALLDMNAKCGNMDRALKLFKEMPKRDLVSYCSMIQGLSIHGCGEDAVRLFNSMLMEGL 201
+ +LL M +KC +D A +F+ + K+ V++ +MI G + +GC +A+ LF M + +
Sbjct: 358 MNSLLSMYSKCKRVDLAASIFENLKKKTNVTWNAMILGYAQNGCVNEALYLFCVMQSQEV 417
Query: 202 VPDEVAFTIILTACSHSGLVDEGWNYFQSMKQKYGISPSPDH----FACMVDLLSRSGHL 257
PD ++TA L D N I D+ ++D+ ++ G
Sbjct: 418 KPDCFTLVAVITA-----LADLSVNRMAKWIHGLAIRTFMDNDVYVATALIDMYAKCGAT 472
Query: 258 GDAYELMKSMHEPHAGAWGALLGACKLHG 286
A +L MHE H W A++ HG
Sbjct: 473 QTARKLFDMMHERHVITWNAMIDGYGTHG 501
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 48/174 (27%), Positives = 84/174 (48%), Gaps = 1/174 (0%)
Query: 41 TTMIDGYAKAGDMAAARFLFEQATEKDVVAWSALISGYVQNGQPNQALKVFLEMESKNVK 100
T +I+ + K G + A +F+ K V + A++ GY +N AL + M++ V+
Sbjct: 56 TKLINMFFKHGSINEASLVFDTVEHKQDVLYHAMLKGYAKNSSLCDALCFYHRMQNDGVR 115
Query: 101 PDEFILVSLMSATSQLGHLELAQWVDSYVSKSSIDLQQDHVIAALLDMNAKCGNMDRALK 160
P + L+ + LE + + V + + +I ++ KCG +D A K
Sbjct: 116 PVVYDFAYLLQLCGKKFELEKGREIHGQVIVNGFEYDLFSMI-GVMGFYVKCGEIDDAFK 174
Query: 161 LFKEMPKRDLVSYCSMIQGLSIHGCGEDAVRLFNSMLMEGLVPDEVAFTIILTA 214
+F+ + ++DLVS+ S+I G + +G + A+ LF M GL D V IL A
Sbjct: 175 VFERLSEKDLVSWTSLIAGYAQNGYPKRALDLFYRMQEAGLKADSVTLVSILPA 228
>Medtr1g114220.1 | PPR containing plant-like protein | HC |
chr1:51543346-51541694 | 20130731
Length = 550
Score = 259 bits (662), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 132/338 (39%), Positives = 213/338 (63%), Gaps = 5/338 (1%)
Query: 10 NAMLCGFVKDGDLSSARGVFDAMPEKNVVSFTTMIDGYAKAGDMAAARFLFEQATEKDVV 69
N+++ + G++ A VF++M KN+VS+ +M+DGYAK G+MA A+ +FE E+DV
Sbjct: 153 NSLIHMYASCGNIMWAHKVFESMQGKNLVSWNSMLDGYAKCGEMAMAQKVFESMQERDVR 212
Query: 70 AWSALISGYVQNGQPNQALKVFLEMESKNVKPDEFILVSLMSATSQLGHLELAQWVDSYV 129
+WS+ I GYV+ G+ +A+ VF +M + K +E +VS++SA + LG L+ + + Y+
Sbjct: 213 SWSSFIDGYVKAGEYREAMAVFEKMRAVGPKANEVTMVSVLSACAHLGALQKGRMMHQYI 272
Query: 130 SKSSIDLQQDHVIAALLDMNAKCGNMDRALKLFKEMPK--RDLVSYCSMIQGLSIHGCGE 187
+ + + + +L+DM AKCG ++ AL +F+ + K D+ + +MI GL+ HG E
Sbjct: 273 IDNLLPMTMV-LQTSLVDMYAKCGAIEEALFVFRGISKSQTDVFIWNAMIGGLATHGLVE 331
Query: 188 DAVRLFNSMLMEGLVPDEVAFTIILTACSHSGLVDEGWNYFQSMKQKYGISPSPDHFACM 247
++++LF M M G+ DE+ + +L AC+H GLV E WN+F+S+ ++ G++P+ +H+ACM
Sbjct: 332 ESLKLFKEMQMAGIRSDEITYLCLLAACAHGGLVKEAWNFFESLVKR-GMTPTSEHYACM 390
Query: 248 VDLLSRSGHLGDAYELMKSMH-EPHAGAWGALLGACKLHGDSDLGEIVANQLFELEPQNA 306
VD+L+R+G L AY+ + + EP A GA+ C H + DL E V +L EL+P N
Sbjct: 391 VDVLARAGQLTTAYQFICQIPIEPTASMLGAIFSGCINHRNFDLAETVGRKLIELDPNND 450
Query: 307 ANYILLSNIYAAAERWIDVSLVRSRMRERSVQKIPGCS 344
YI LSN+YA +RW D +R M R V+K PG S
Sbjct: 451 GRYIGLSNVYAVVKRWDDSKSMREAMERRGVKKSPGFS 488
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 68/290 (23%), Positives = 129/290 (44%), Gaps = 53/290 (18%)
Query: 37 VVSFTTMIDGYAKAGDMAAARFLFEQATEKDVVAWSALISGYVQNGQPNQALKVFLEMES 96
++SF+ + + +GD+ + +F Q + + +W+ +I GY + P +L +FL+M
Sbjct: 52 ILSFSAL----SNSGDIDYSYRVFSQISSPTIFSWNIIIRGYSNSKNPIHSLSIFLKMLR 107
Query: 97 KNVKPDEFILVSLMSATSQLGH-----------LELAQWVDSYVSKSSI----------- 134
V PD L+ A+++L ++ D ++ S I
Sbjct: 108 HGVAPDYLTYPFLVKASARLSKQKSGVSVHAQIIKTGHESDRFIQNSLIHMYASCGNIMW 167
Query: 135 ------DLQQDHVIA--ALLDMNAKCGNMDRALKLFKEMPKRDLVSYCSMIQGLSIHGCG 186
+Q ++++ ++LD AKCG M A K+F+ M +RD+ S+ S I G G
Sbjct: 168 AHKVFESMQGKNLVSWNSMLDGYAKCGEMAMAQKVFESMQERDVRSWSSFIDGYVKAGEY 227
Query: 187 EDAVRLFNSMLMEGLVPDEVAFTIILTACSHSGLVDEGWNYFQSMKQKYGISPSPDHF-- 244
+A+ +F M G +EV +L+AC+H G + +G M +Y I D+
Sbjct: 228 REAMAVFEKMRAVGPKANEVTMVSVLSACAHLGALQKG-----RMMHQYII----DNLLP 278
Query: 245 ------ACMVDLLSRSGHLGDAYELMKSMHEPHAGA--WGALLGACKLHG 286
+VD+ ++ G + +A + + + + W A++G HG
Sbjct: 279 MTMVLQTSLVDMYAKCGAIEEALFVFRGISKSQTDVFIWNAMIGGLATHG 328
>Medtr1g073300.1 | pentatricopeptide (PPR) repeat protein | HC |
chr1:32525227-32527614 | 20130731
Length = 795
Score = 259 bits (661), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 135/339 (39%), Positives = 208/339 (61%), Gaps = 8/339 (2%)
Query: 10 NAMLCGFVKDGDLSSARGVFDAMPEKNVVSFTTMIDGYAKAGDMAAARFLFEQATEKDVV 69
NA++ + K + AR VFD MP ++++S+ ++ GY A + A +F + E++V+
Sbjct: 330 NALITFYTKYDRMIEARRVFDKMPVRDIISWNAVLSGYVNAQRIEEANSIFSEMPERNVL 389
Query: 70 AWSALISGYVQNGQPNQALKVFLEMESKNVKPDEFILVSLMSATSQLGHLELAQWVDSYV 129
W+ +ISG QNG + LK+F +M+S+ ++P ++ ++A S LG L+ Q + S V
Sbjct: 390 TWTVMISGLAQNGFGEEGLKLFNQMKSEGLEPCDYAFAGAITACSVLGSLDNGQQIHSQV 449
Query: 130 SKSSIDLQQDHVIAA---LLDMNAKCGNMDRALKLFKEMPKRDLVSYCSMIQGLSIHGCG 186
I L D ++A L+ M ++CG ++ A +F MP D VS+ +MI L+ HG G
Sbjct: 450 ----IRLGHDSGLSAGNALITMYSRCGVVESAESVFLTMPYVDSVSWNAMIAALAQHGHG 505
Query: 187 EDAVRLFNSMLMEGLVPDEVAFTIILTACSHSGLVDEGWNYFQSMKQKYGISPSPDHFAC 246
A+ LF M+ E ++PD + F ILTAC+H+GL+ EG +YF +M +YGI+P DH+A
Sbjct: 506 VKAIELFEQMMKEDILPDRITFLTILTACNHAGLIKEGRHYFDTMCTRYGITPGEDHYAR 565
Query: 247 MVDLLSRSGHLGDAYELMKSM-HEPHAGAWGALLGACKLHGDSDLGEIVANQLFELEPQN 305
++DLL R+G A ++KSM E A W ALL C++HG+ +LG A++L EL P
Sbjct: 566 LIDLLCRAGMFLKAQSVIKSMPFEAGAPIWEALLAGCRIHGNMELGIQAADRLLELIPGQ 625
Query: 306 AANYILLSNIYAAAERWIDVSLVRSRMRERSVQKIPGCS 344
YI+LSN+YAA +W +V+ VR MRER V+K PGCS
Sbjct: 626 DGTYIILSNMYAALGQWDEVARVRLLMRERGVKKEPGCS 664
Score = 131 bits (329), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 95/319 (29%), Positives = 150/319 (47%), Gaps = 45/319 (14%)
Query: 22 LSSARGVFDAMPEKNVV--SFTTMIDGYAKAGDMAAARFLFEQATEKDVVAWSALISGYV 79
++SAR VFD P+ + S+TTMI GY + D+ AAR L + T VAW+A+ISGYV
Sbjct: 200 MASARKVFDETPKNQIYEPSWTTMIAGYVRNDDLVAARELLDGLTYPIDVAWNAMISGYV 259
Query: 80 QNGQPNQALKVFLEMESKNVKPDEFILVSLMSA----TSQLGHLELAQWVDSYVSKSSID 135
+ G +A F M S ++ DE+ SL+SA ++G + V Y+ ++ ++
Sbjct: 260 RRGLYEEAFDTFRRMHSMGIQEDEYTYTSLISACGSCNEKMGMFNCGRQVHGYILRTVVE 319
Query: 136 LQQDHVIA---ALLDMNAKCGNMDRALKLFKEMPKRDLVSYCS----------------- 175
V++ AL+ K M A ++F +MP RD++S+ +
Sbjct: 320 PSHHFVLSVNNALITFYTKYDRMIEARRVFDKMPVRDIISWNAVLSGYVNAQRIEEANSI 379
Query: 176 --------------MIQGLSIHGCGEDAVRLFNSMLMEGLVPDEVAFTIILTACSHSGLV 221
MI GL+ +G GE+ ++LFN M EGL P + AF +TACS G +
Sbjct: 380 FSEMPERNVLTWTVMISGLAQNGFGEEGLKLFNQMKSEGLEPCDYAFAGAITACSVLGSL 439
Query: 222 DEGWNYFQSMKQKYGISPSPDHFACMVDLLSRSGHLGDAYELMKSMHEPHAGAWGALLGA 281
D G S + G ++ + SR G + A + +M + +W A++ A
Sbjct: 440 DNGQQ-IHSQVIRLGHDSGLSAGNALITMYSRCGVVESAESVFLTMPYVDSVSWNAMIAA 498
Query: 282 CKLHGDSDLGEIVANQLFE 300
HG + A +LFE
Sbjct: 499 LAQHGHG----VKAIELFE 513
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 75/330 (22%), Positives = 138/330 (41%), Gaps = 59/330 (17%)
Query: 5 NVASWNAMLCGFVKDGDLSSARGVFDAMPEKNVVSFTTMIDGYAKAGDMAAARFLFEQA- 63
N N ++ + K +++ AR +FD +P+ ++V+ TT++ Y+ +G++ A+ LF
Sbjct: 39 NTFILNRLINIYCKSSNITYARKLFDKIPKPDIVARTTLLSAYSSSGNVKLAQQLFNATP 98
Query: 64 -TEKDVVAWSALISGYVQNGQPNQALKVFLEMESKNVKPDEFILVSLMSATS-------- 114
T +D V+++A+I+ Y + AL +F++M+ PD F S++SA S
Sbjct: 99 LTIRDTVSYNAMITAYSHGNDGHAALNLFVQMKRYGFLPDPFTFSSVLSALSLIADEERH 158
Query: 115 -QLGHLELAQWVDSYVSKSSIDLQQDHVIAALLDMNAKCGNMDRALKLFKEMPKRDL--- 170
Q+ H E+ + + + L +V A + M A K+F E PK +
Sbjct: 159 CQMLHCEVIKLGTLLIPSVTNALLSCYVCCASSPLVKSSQLMASARKVFDETPKNQIYEP 218
Query: 171 ------------------------------VSYCSMIQGLSIHGCGEDAVRLFNSMLMEG 200
V++ +MI G G E+A F M G
Sbjct: 219 SWTTMIAGYVRNDDLVAARELLDGLTYPIDVAWNAMISGYVRRGLYEEAFDTFRRMHSMG 278
Query: 201 LVPDEVAFTIILTACSHSGLVDEGWNYFQSMKQKYG------ISPSPDHFA-----CMVD 249
+ DE +T +++AC G +E F +Q +G + PS HF ++
Sbjct: 279 IQEDEYTYTSLISAC---GSCNEKMGMFNCGRQVHGYILRTVVEPS-HHFVLSVNNALIT 334
Query: 250 LLSRSGHLGDAYELMKSMHEPHAGAWGALL 279
++ + +A + M +W A+L
Sbjct: 335 FYTKYDRMIEARRVFDKMPVRDIISWNAVL 364
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 40/143 (27%), Positives = 73/143 (51%), Gaps = 8/143 (5%)
Query: 114 SQLGHLE----LAQWVDSYVSKSSIDLQQDHVIAALLDMNAKCGNMDRALKLFKEMPKRD 169
+QL H+ +A+ V +++ S ++ L+++ K N+ A KLF ++PK D
Sbjct: 12 TQLNHVSTTQIIARAVHAHILTSGFK-PNTFILNRLINIYCKSSNITYARKLFDKIPKPD 70
Query: 170 LVSYCSMIQGLSIHGCGEDAVRLFNSMLMEGLVPDEVAFTIILTACSHSGLVDEGWNYFQ 229
+V+ +++ S G + A +LFN+ + + D V++ ++TA SH N F
Sbjct: 71 IVARTTLLSAYSSSGNVKLAQQLFNATPLT--IRDTVSYNAMITAYSHGNDGHAALNLFV 128
Query: 230 SMKQKYGISPSPDHFACMVDLLS 252
MK +YG P P F+ ++ LS
Sbjct: 129 QMK-RYGFLPDPFTFSSVLSALS 150
>Medtr4g130500.1 | pentatricopeptide (PPR) repeat protein | HC |
chr4:54376407-54379381 | 20130731
Length = 783
Score = 259 bits (661), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 124/299 (41%), Positives = 184/299 (61%), Gaps = 2/299 (0%)
Query: 47 YAKAGDMAAARFLFEQATEKDVVAWSALISGYVQNGQPNQALKVFLEMESKNVKPDEFIL 106
Y K ++ AR LF+++ EK VVAW+A+ISGY QNG A+ +F EM P+ +
Sbjct: 355 YNKLNEIDLARHLFDESPEKTVVAWNAMISGYTQNGSTETAISLFKEMMKTEFTPNAVTI 414
Query: 107 VSLMSATSQLGHLELAQWVDSYVSKSSIDLQQDHVIAALLDMNAKCGNMDRALKLFKEMP 166
+++SA +QLG L +WV + +++ +V AL+DM AKCGN+ A +LF M
Sbjct: 415 TTILSACAQLGSLSFGKWVHHLIKSENLE-PNIYVSTALVDMYAKCGNISEAWQLFDSMS 473
Query: 167 KRDLVSYCSMIQGLSIHGCGEDAVRLFNSMLMEGLVPDEVAFTIILTACSHSGLVDEGWN 226
+++ V++ +MI G +HG G +A++L+N ML G P V F +L ACSH+GLV EG
Sbjct: 474 EKNTVTWNTMIFGYGLHGYGHEALKLYNEMLHLGYNPSAVTFLSVLYACSHAGLVGEGEE 533
Query: 227 YFQSMKQKYGISPSPDHFACMVDLLSRSGHLGDAYELMKSMH-EPHAGAWGALLGACKLH 285
F +M KY I P +H+ACMVD+L RSG L A E +K M EP WG LLGAC +H
Sbjct: 534 IFHNMVNKYRIEPLIEHYACMVDILGRSGQLEKALEFIKKMPVEPGPAVWGTLLGACMIH 593
Query: 286 GDSDLGEIVANQLFELEPQNAANYILLSNIYAAAERWIDVSLVRSRMRERSVQKIPGCS 344
D+D+ + + +LFEL+P + Y+LLSNIY+ + + +R +++R + K PGC+
Sbjct: 594 KDTDIARLASERLFELDPGSVGYYVLLSNIYSVERNFPKAASIRQVVKKRKLAKSPGCT 652
Score = 135 bits (340), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 97/359 (27%), Positives = 160/359 (44%), Gaps = 42/359 (11%)
Query: 1 MPQRNVASWNAMLCGFVK----------------DG---DLSSARGVFDAMPEKNVVS-- 39
MP+R+ WN M+ G VK DG D S+ V A E +
Sbjct: 169 MPERDTVLWNTMINGLVKNCCFDDSIQLFREMVADGVRVDSSTVTAVLPAAAELQELKVG 228
Query: 40 ------------------FTTMIDGYAKAGDMAAARFLFEQATEKDVVAWSALISGYVQN 81
T +I Y+K GD+ AR LF + D++A++A+ISG+ N
Sbjct: 229 MGIQCLALKIGFGFCDYVLTGLISLYSKCGDVNTARLLFRRINRPDLIAYNAMISGFTAN 288
Query: 82 GQPNQALKVFLEMESKNVKPDEFILVSLMSATSQLGHLELAQWVDSYVSKSSIDLQQDHV 141
G ++K+F E+ + +V L+ S GHL LA + + KS I L V
Sbjct: 289 GGTECSVKLFRELLFSGERVSSSTIVGLIPLHSPFGHLHLACSIHGFCVKSGIILNPT-V 347
Query: 142 IAALLDMNAKCGNMDRALKLFKEMPKRDLVSYCSMIQGLSIHGCGEDAVRLFNSMLMEGL 201
A + K +D A LF E P++ +V++ +MI G + +G E A+ LF M+
Sbjct: 348 STAFTAIYNKLNEIDLARHLFDESPEKTVVAWNAMISGYTQNGSTETAISLFKEMMKTEF 407
Query: 202 VPDEVAFTIILTACSHSGLVDEGWNYFQSMKQKYGISPSPDHFACMVDLLSRSGHLGDAY 261
P+ V T IL+AC+ G + G + + + + P+ +VD+ ++ G++ +A+
Sbjct: 408 TPNAVTITTILSACAQLGSLSFG-KWVHHLIKSENLEPNIYVSTALVDMYAKCGNISEAW 466
Query: 262 ELMKSMHEPHAGAWGALLGACKLHGDSDLGEIVANQLFELEPQNAANYILLSNIYAAAE 320
+L SM E + W ++ LHG + N++ L N + LS +YA +
Sbjct: 467 QLFDSMSEKNTVTWNTMIFGYGLHGYGHEALKLYNEMLHL-GYNPSAVTFLSVLYACSH 524
Score = 97.1 bits (240), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 71/295 (24%), Positives = 137/295 (46%), Gaps = 28/295 (9%)
Query: 36 NVVSFTTMIDGYAKAGDMAAARFLFEQATEKDVVAWSALISGYVQNGQPNQALKVFLEME 95
NV + ++D Y K + AR +F+ E+D V W+ +I+G V+N + ++++F EM
Sbjct: 142 NVFVGSALVDLYCKFSRVVYARKVFDGMPERDTVLWNTMINGLVKNCCFDDSIQLFREMV 201
Query: 96 SKNVKPDEFILVSLMSATSQLGHLELAQWVDSYVSKSSIDLQQDHVIAALLDMNAKCGNM 155
+ V+ D + +++ A ++L L++ + K D+V+ L+ + +KCG++
Sbjct: 202 ADGVRVDSSTVTAVLPAAAELQELKVGMGIQCLALKIGFGFC-DYVLTGLISLYSKCGDV 260
Query: 156 DRALKLFKEMPKRDLVSYCSMIQGLSIHGCGEDAVRLFNSMLME----------GLVPDE 205
+ A LF+ + + DL++Y +MI G + +G E +V+LF +L GL+P
Sbjct: 261 NTARLLFRRINRPDLIAYNAMISGFTANGGTECSVKLFRELLFSGERVSSSTIVGLIPLH 320
Query: 206 VAFTIILTACSHSGLVDEGWNYFQSMKQKYGISPSPDHFACMVDLLSRSGHLGDAYELMK 265
F + ACS G K GI +P + ++ + A L
Sbjct: 321 SPFGHLHLACSIHGFC-----------VKSGIILNPTVSTAFTAIYNKLNEIDLARHLFD 369
Query: 266 SMHEPHAGAWGALLGACKLHGDSDLGEIVANQLFE--LEPQNAANYILLSNIYAA 318
E AW A++ +G ++ A LF+ ++ + N + ++ I +A
Sbjct: 370 ESPEKTVVAWNAMISGYTQNGSTE----TAISLFKEMMKTEFTPNAVTITTILSA 420
Score = 85.5 bits (210), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 64/252 (25%), Positives = 115/252 (45%), Gaps = 42/252 (16%)
Query: 2 PQRNVASWNAMLCGFVKDGDLSSARGVFDAM------P---------------------- 33
P++ V +WNAM+ G+ ++G +A +F M P
Sbjct: 372 PEKTVVAWNAMISGYTQNGSTETAISLFKEMMKTEFTPNAVTITTILSACAQLGSLSFGK 431
Query: 34 -----------EKNVVSFTTMIDGYAKAGDMAAARFLFEQATEKDVVAWSALISGYVQNG 82
E N+ T ++D YAK G+++ A LF+ +EK+ V W+ +I GY +G
Sbjct: 432 WVHHLIKSENLEPNIYVSTALVDMYAKCGNISEAWQLFDSMSEKNTVTWNTMIFGYGLHG 491
Query: 83 QPNQALKVFLEMESKNVKPDEFILVSLMSATSQLGHL-ELAQWVDSYVSKSSIDLQQDHV 141
++ALK++ EM P +S++ A S G + E + + V+K I+ +H
Sbjct: 492 YGHEALKLYNEMLHLGYNPSAVTFLSVLYACSHAGLVGEGEEIFHNMVNKYRIEPLIEHY 551
Query: 142 IAALLDMNAKCGNMDRALKLFKEMPKRDLVSYCSMIQGLSIHGCGEDAVRLFNSMLMEGL 201
A ++D+ + G +++AL+ K+MP + + G + D RL + L E L
Sbjct: 552 -ACMVDILGRSGQLEKALEFIKKMPVEPGPAVWGTLLGACMIHKDTDIARLASERLFE-L 609
Query: 202 VPDEVAFTIILT 213
P V + ++L+
Sbjct: 610 DPGSVGYYVLLS 621
>Medtr4g108890.1 | PPR containing plant-like protein | HC |
chr4:45133263-45138694 | 20130731
Length = 548
Score = 259 bits (661), Expect = 4e-69, Method: Compositional matrix adjust.
Identities = 145/349 (41%), Positives = 214/349 (61%), Gaps = 19/349 (5%)
Query: 10 NAMLCGFVKD-GDLSSARGVFDAMPEKNVVSFTTMIDGYAKAGDMAAARFLFEQATEKDV 68
N L F D G + AR VFD M +++VVS+ +++ GY K GD AAR +FE+ ++V
Sbjct: 152 NTNLINFYADCGGVEQARYVFDDMTQRSVVSWNSLLVGYVKCGDFDAARNVFEEIPVRNV 211
Query: 69 VAWSALISGYVQNGQPNQALKVFLEMESKNVKPDEFILVSLMSATSQLGHLELAQWVDSY 128
V+W+ +I+GY QNG+ +AL +F +M V+ D+ +LV+++SA ++LG L+L +W+ Y
Sbjct: 212 VSWTTMIAGYAQNGKCVEALSLFGQMRRARVELDQVVLVAVLSACAELGDLKLGRWIHWY 271
Query: 129 VS----KSSIDLQQDHVIAALLDMNAKCGNMDRALKLFKEMPKRDLVSYCSMIQGLSIHG 184
V ++S+ L AL+ M A CG +D A ++F +M + VS+ +I + G
Sbjct: 272 VQERQRQASVRLNN-----ALMHMYASCGIIDEAYRMFTKMSWKTTVSWTIIIMAFAKQG 326
Query: 185 CGEDAVRLFNSMLME-----GLVPDEVAFTIILTACSHSGLVDEGWNYFQSMKQKYGISP 239
G++A+ LF ML + G+ PD F L ACSH+G V+EG F+SM + IS
Sbjct: 327 LGKEALDLFKDMLSDGVGKSGIRPDGTTFIAALCACSHAGFVEEGCRIFESMIHTWRISL 386
Query: 240 SPDHFACMVDLLSRSGHLGDAYELMKSM-HEPHAGAWGALLGACKLHGDSDLGEIVANQL 298
+H+ CMVDLLSR+G L +AY L+++M +P+ WGALLG C++H +S+L VAN L
Sbjct: 387 QIEHYGCMVDLLSRAGCLDEAYRLIETMPFKPNDAIWGALLGGCRIHKNSELASRVANTL 446
Query: 299 F-ELEP--QNAANYILLSNIYAAAERWIDVSLVRSRMRERSVQKIPGCS 344
EL+ Q A +LLSNIYA A RW DV VR +M E V+K PG S
Sbjct: 447 VAELDSTDQAAGYLVLLSNIYAFAGRWQDVIAVRQKMIEMGVKKPPGQS 495
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 64/270 (23%), Positives = 123/270 (45%), Gaps = 33/270 (12%)
Query: 43 MIDGYAKAGDMAAARFLFEQATEKDVVAWSALISGYVQNGQPNQALKVFLEMESKNVKPD 102
++ YA +G + A LF Q W+ +I Y + P ++++ + +M +PD
Sbjct: 54 LLSFYAASGKLQHAHKLFIQIHNPKTTVWNHMIRAYASSITPWKSVQYYNQMVLNACEPD 113
Query: 103 EFILVSLMSAT---------SQLGHLELAQWV--DSYVSKSSI----------------- 134
F L+SA QL + LA+ D +V+ + I
Sbjct: 114 GFTYSFLLSACVRGGLVREGEQLHGIVLAKGYCSDVFVNTNLINFYADCGGVEQARYVFD 173
Query: 135 DLQQDHVIA--ALLDMNAKCGNMDRALKLFKEMPKRDLVSYCSMIQGLSIHGCGEDAVRL 192
D+ Q V++ +LL KCG+ D A +F+E+P R++VS+ +MI G + +G +A+ L
Sbjct: 174 DMTQRSVVSWNSLLVGYVKCGDFDAARNVFEEIPVRNVVSWTTMIAGYAQNGKCVEALSL 233
Query: 193 FNSMLMEGLVPDEVAFTIILTACSHSGLVDEG-WNYFQSMKQKYGISPSPDHFACMVDLL 251
F M + D+V +L+AC+ G + G W ++ +++ S ++ ++ +
Sbjct: 234 FGQMRRARVELDQVVLVAVLSACAELGDLKLGRWIHWYVQERQRQASVRLNN--ALMHMY 291
Query: 252 SRSGHLGDAYELMKSMHEPHAGAWGALLGA 281
+ G + +AY + M +W ++ A
Sbjct: 292 ASCGIIDEAYRMFTKMSWKTTVSWTIIIMA 321
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 47/209 (22%), Positives = 90/209 (43%), Gaps = 18/209 (8%)
Query: 137 QQDHVIAALLDMNAKCGNMDRALKLFKEMPKRDLVSYCSMIQGLSIHGCGEDAVRLFNSM 196
+ ++IA LL A G + A KLF ++ + MI+ + +V+ +N M
Sbjct: 46 HKHNIIAKLLSFYAASGKLQHAHKLFIQIHNPKTTVWNHMIRAYASSITPWKSVQYYNQM 105
Query: 197 LMEGLVPDEVAFTIILTACSHSGLVDEGWNYFQSMKQKYGISPSPDHFA------CMVDL 250
++ PD ++ +L+AC GLV EG +Q +GI + + + +++
Sbjct: 106 VLNACEPDGFTYSFLLSACVRGGLVREG-------EQLHGIVLAKGYCSDVFVNTNLINF 158
Query: 251 LSRSGHLGDAYELMKSMHEPHAGAWGALLGACKLHGDSDLGEIVANQLFELEP-QNAANY 309
+ G + A + M + +W +LL GD D A +FE P +N ++
Sbjct: 159 YADCGGVEQARYVFDDMTQRSVVSWNSLLVGYVKCGDFD----AARNVFEEIPVRNVVSW 214
Query: 310 ILLSNIYAAAERWIDVSLVRSRMRERSVQ 338
+ YA + ++ + +MR V+
Sbjct: 215 TTMIAGYAQNGKCVEALSLFGQMRRARVE 243
>Medtr5g018690.1 | PPR containing protein | HC |
chr5:6968759-6971652 | 20130731
Length = 663
Score = 258 bits (658), Expect = 8e-69, Method: Compositional matrix adjust.
Identities = 132/331 (39%), Positives = 209/331 (63%), Gaps = 2/331 (0%)
Query: 10 NAMLCGFVKDGDLSSARGVFDAMPEKNVVSFTTMIDGYAKAGDMAAARFLFEQATEKDVV 69
NA++ + K G+L A+ VFD M +K+VVS+T MI+ YA G + A F Q K+VV
Sbjct: 274 NALMDMYAKCGNLKCAKSVFDQMLDKDVVSWTCMINAYANHGLIDCALEFFNQMPGKNVV 333
Query: 70 AWSALISGYVQNGQPNQALKVFLEMESKNVKPDEFILVSLMSATSQLGHLELAQWVDSYV 129
+W+++I +VQ G +A+ +F M V ++ LV+++S+ S +G L L + SY+
Sbjct: 334 SWNSIIWCHVQEGLYAEAVDLFYRMCDSGVMANDTTLVAILSSCSHMGDLALGKQAHSYI 393
Query: 130 SKSSIDLQQDHVIAALLDMNAKCGNMDRALKLFKEMPKRDLVSYCSMIQGLSIHGCGEDA 189
++I L + A++DM AKCG + A+ +F MP+++ VS+ +I L++HG G++A
Sbjct: 394 FDNNITLSAT-LCNAIIDMYAKCGALQTAMDVFFGMPEKNAVSWNVIIGALALHGYGKEA 452
Query: 190 VRLFNSMLMEGLVPDEVAFTIILTACSHSGLVDEGWNYFQSMKQKYGISPSPDHFACMVD 249
+ +F M G+ PDE+ FT +L+ACSHSGLVD G +YF+ M +GISP +H+ACMVD
Sbjct: 453 IEMFEKMQASGVCPDEITFTGLLSACSHSGLVDTGQHYFEIMNLTFGISPDVEHYACMVD 512
Query: 250 LLSRSGHLGDAYELMKSMH-EPHAGAWGALLGACKLHGDSDLGEIVANQLFELEPQNAAN 308
LL R G LG+A L+K M +P W ALLGAC+ +G+ +G+ + QL EL N+
Sbjct: 513 LLGRRGLLGEAISLIKKMPVKPDVVVWSALLGACRTYGNLAIGKQIMKQLLELGRYNSGL 572
Query: 309 YILLSNIYAAAERWIDVSLVRSRMRERSVQK 339
Y+LLSN+Y+ ++RW D+ + + + ++K
Sbjct: 573 YVLLSNMYSESQRWDDMKNIWKILDQNGIKK 603
Score = 120 bits (301), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 78/275 (28%), Positives = 141/275 (51%), Gaps = 33/275 (12%)
Query: 43 MIDGYAKAGDMAAARFLFEQATEKDVVAWSALISGYVQNGQPNQALKVFLEMESKNVKPD 102
+++ Y G + +AR +F+ +E+ +V+W+++I+GY + G+ +A+ +F EM+ ++PD
Sbjct: 175 ILNIYVACGLITSARRVFDDISERTLVSWNSMINGYSKMGRSEEAVLMFREMQEVGLEPD 234
Query: 103 EFILVSLMSATSQLGHLELAQWVDSYVSKSSIDLQQDHVIAALLDMNAKCGNMDRALKLF 162
F LV L+S +++ G+ +L ++V ++ + I++ V AL+DM AKCGN+ A +F
Sbjct: 235 VFTLVGLLSVSTKHGNFDLGRFVHLHMVVTGIEIDSI-VTNALMDMYAKCGNLKCAKSVF 293
Query: 163 KEMPKRDLVSYCSMIQGLSIHGCGEDAVRLFNSM---------------LMEGLVPDEV- 206
+M +D+VS+ MI + HG + A+ FN M + EGL + V
Sbjct: 294 DQMLDKDVVSWTCMINAYANHGLIDCALEFFNQMPGKNVVSWNSIIWCHVQEGLYAEAVD 353
Query: 207 ---------------AFTIILTACSHSGLVDEGWNYFQSMKQKYGISPSPDHFACMVDLL 251
IL++CSH G + G S I+ S ++D+
Sbjct: 354 LFYRMCDSGVMANDTTLVAILSSCSHMGDLALG-KQAHSYIFDNNITLSATLCNAIIDMY 412
Query: 252 SRSGHLGDAYELMKSMHEPHAGAWGALLGACKLHG 286
++ G L A ++ M E +A +W ++GA LHG
Sbjct: 413 AKCGALQTAMDVFFGMPEKNAVSWNVIIGALALHG 447
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 64/265 (24%), Positives = 117/265 (44%), Gaps = 8/265 (3%)
Query: 37 VVSFTTMIDGYAKAGDMAAARFLFEQATEKDVVAWSALISGYVQNGQPNQALKVFLEMES 96
V++ ++ + D+ A LF+Q + + ++ LI GY + P ++L ++ M
Sbjct: 68 VLTLGKLVSSSVQLRDLRYAHKLFDQIPQPNKFMFNHLIKGYSNSSDPIKSLLLYRRMVC 127
Query: 97 KNVKPDEFILVSLMSATSQLGHLELAQWVDSYVSKSSIDL---QQDHVIAALLDMNAKCG 153
+ P++F + ++ A + + W+ V S L V A+L++ CG
Sbjct: 128 DGILPNQFTIPFVLKACAA----KSCYWLGVCVHAQSFKLGMGSHACVQNAILNIYVACG 183
Query: 154 NMDRALKLFKEMPKRDLVSYCSMIQGLSIHGCGEDAVRLFNSMLMEGLVPDEVAFTIILT 213
+ A ++F ++ +R LVS+ SMI G S G E+AV +F M GL PD +L+
Sbjct: 184 LITSARRVFDDISERTLVSWNSMINGYSKMGRSEEAVLMFREMQEVGLEPDVFTLVGLLS 243
Query: 214 ACSHSGLVDEGWNYFQSMKQKYGISPSPDHFACMVDLLSRSGHLGDAYELMKSMHEPHAG 273
+ G D G + GI ++D+ ++ G+L A + M +
Sbjct: 244 VSTKHGNFDLG-RFVHLHMVVTGIEIDSIVTNALMDMYAKCGNLKCAKSVFDQMLDKDVV 302
Query: 274 AWGALLGACKLHGDSDLGEIVANQL 298
+W ++ A HG D NQ+
Sbjct: 303 SWTCMINAYANHGLIDCALEFFNQM 327
>Medtr1g071240.1 | pentatricopeptide (PPR) repeat protein | HC |
chr1:31582853-31578503 | 20130731
Length = 1126
Score = 257 bits (656), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 123/303 (40%), Positives = 196/303 (64%), Gaps = 2/303 (0%)
Query: 43 MIDGYAKAGDMAAARFLFEQATEKDVVAWSALISGYVQNGQPNQALKVFLEMESKNVKPD 102
+++ Y + + AR +FE KD+V+W+++I+ V NG +AL++F + N++PD
Sbjct: 493 IVNVYGELALVDYARHVFESINSKDIVSWTSMITCCVHNGLAIEALELFNSLIETNIEPD 552
Query: 103 EFILVSLMSATSQLGHLELAQWVDSYVSKSSIDLQQDHVIAALLDMNAKCGNMDRALKLF 162
LVS++ A + L L+ + + ++ + L+ + +L+DM A+CG M+ A +F
Sbjct: 553 LITLVSVLYAAAALSSLKKGKEIHGFLIRKGFFLE-GLIANSLVDMYARCGTMENARNIF 611
Query: 163 KEMPKRDLVSYCSMIQGLSIHGCGEDAVRLFNSMLMEGLVPDEVAFTIILTACSHSGLVD 222
+ +RDL+ + SMI +HGCG+DA+ LF+ M E ++PD + F +L ACSHSGLV
Sbjct: 612 NYVKQRDLILWTSMINANGMHGCGKDAIDLFSKMTDENVLPDHITFLALLYACSHSGLVV 671
Query: 223 EGWNYFQSMKQKYGISPSPDHFACMVDLLSRSGHLGDAYELMKSMH-EPHAGAWGALLGA 281
EG +F+ MK +Y + P P+H+AC+VDLL+RS L +AY +++M EP A W ALLGA
Sbjct: 672 EGKQHFEIMKNEYKLEPWPEHYACLVDLLARSNSLEEAYHFVRNMPIEPSAEVWCALLGA 731
Query: 282 CKLHGDSDLGEIVANQLFELEPQNAANYILLSNIYAAAERWIDVSLVRSRMRERSVQKIP 341
C++H ++DLGE+ A +L +L +N+ NY+L+SN +AA RW DV VRS M+ ++K P
Sbjct: 732 CRIHSNNDLGEVAAKKLLQLNTENSGNYVLVSNTFAADGRWNDVEEVRSIMKGNKLKKKP 791
Query: 342 GCS 344
GCS
Sbjct: 792 GCS 794
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 85/313 (27%), Positives = 149/313 (47%), Gaps = 23/313 (7%)
Query: 16 FVKDGDLSSARGVFDAMPEKN----VVSFTTMIDGYAKAGDMAAARFLFEQATEKDVVAW 71
F+K G RG+ + + N V +I YA G M A +F+ KD V+W
Sbjct: 266 FIKIG-----RGIHAVILKSNHFTDVYVSNALIAMYANCGQMEDAERVFKSMLFKDCVSW 320
Query: 72 SALISGYVQNGQPNQALKVFLEMESKNVKPDEFILVSLMSATSQLGHLELAQWVDSYVSK 131
+ L+SG VQN + A+ F +M+ KPD+ ++++++A+ + +L V +Y K
Sbjct: 321 NTLLSGMVQNDMYSDAINHFQDMQDSGQKPDQVSVLNMIAASGRSANLLAGMEVHAYAIK 380
Query: 132 SSIDLQQDHVIAALLDMNAKCGNMDRALKLFKEMPKRDLVSYCSMIQGLSIHGCGEDAVR 191
ID H+ +L+DM KC + F+ MP++DL+S+ ++I G + + C DA+
Sbjct: 381 HGIDSNM-HIGNSLIDMYGKCCCVKYMGSAFEYMPEKDLISWTTIIAGYAQNECHLDALN 439
Query: 192 LFNSMLMEGLVPDEVAFTIILTACS---HSGLVDEGWNYFQSMKQKYGISPSPDHFACMV 248
L + +E + D + IL ACS L+ E Y K G++ A +V
Sbjct: 440 LLRKVQLEKMDVDPMMIGSILLACSGLKSEKLIKEIHGYV----LKGGLADILIQNA-IV 494
Query: 249 DLLSRSGHLGDAYELMKSMHEPHAGAWGALLGACKLHGDSDLGEIVANQLFE--LEPQNA 306
++ + A + +S++ +W +++ C +G + + N L E +EP
Sbjct: 495 NVYGELALVDYARHVFESINSKDIVSWTSMITCCVHNGLAIEALELFNSLIETNIEPDLI 554
Query: 307 ANYILLSNIYAAA 319
L+S +YAAA
Sbjct: 555 T---LVSVLYAAA 564
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 60/251 (23%), Positives = 120/251 (47%), Gaps = 15/251 (5%)
Query: 42 TMIDGYAKAGDMAAARFLFEQATEKDVVAWSALISGYVQNGQPNQALKVFLEMESKNVKP 101
++ID Y K + FE EKD+++W+ +I+GY QN AL + +++ + +
Sbjct: 392 SLIDMYGKCCCVKYMGSAFEYMPEKDLISWTTIIAGYAQNECHLDALNLLRKVQLEKMDV 451
Query: 102 DEFILVSLMSATSQLGHLELAQWVDSYVSKSSIDLQQDHVIAALLDMNAKCGNMDRALKL 161
D ++ S++ A S L +L + + YV K L + A++++ + +D A +
Sbjct: 452 DPMMIGSILLACSGLKSEKLIKEIHGYVLKGG--LADILIQNAIVNVYGELALVDYARHV 509
Query: 162 FKEMPKRDLVSYCSMIQGLSIHGCGEDAVRLFNSMLMEGLVPDEVAFTIILTACSHSGLV 221
F+ + +D+VS+ SMI +G +A+ LFNS++ + PD + +L A + +
Sbjct: 510 FESINSKDIVSWTSMITCCVHNGLAIEALELFNSLIETNIEPDLITLVSVLYAAAALSSL 569
Query: 222 DEGWNYFQSMKQKYGISPSPDHFA------CMVDLLSRSGHLGDAYELMKSMHEPHAGAW 275
+G K+ +G F +VD+ +R G + +A + + + W
Sbjct: 570 KKG-------KEIHGFLIRKGFFLEGLIANSLVDMYARCGTMENARNIFNYVKQRDLILW 622
Query: 276 GALLGACKLHG 286
+++ A +HG
Sbjct: 623 TSMINANGMHG 633
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 64/259 (24%), Positives = 120/259 (46%), Gaps = 36/259 (13%)
Query: 10 NAMLCGFVKDGDLSSARGVFDA-MPEKNVVSFTTMIDGYAKAGDMAAARFLFEQATEKDV 68
NA++ + K GDL AR +FD+ + EK+ D
Sbjct: 187 NALIAMYAKCGDLGGARVLFDSGLMEKD------------------------------DP 216
Query: 69 VAWSALISGYVQNGQPNQALKVFLEMESKNVKPDEFILVSLMSATSQLGHLELAQWVDSY 128
V+W+++IS +V G+ +AL +F M+ V+ + + VS + A +++ + + +
Sbjct: 217 VSWNSIISAHVGEGESLEALSLFRRMQEVGVESNTYTFVSALQACEGPTFIKIGRGIHAV 276
Query: 129 VSKSSIDLQQDHVIAALLDMNAKCGNMDRALKLFKEMPKRDLVSYCSMIQGLSIHGCGED 188
+ KS+ +V AL+ M A CG M+ A ++FK M +D VS+ +++ G+ + D
Sbjct: 277 ILKSN-HFTDVYVSNALIAMYANCGQMEDAERVFKSMLFKDCVSWNTLLSGMVQNDMYSD 335
Query: 189 AVRLFNSMLMEGLVPDEVAFTIILTACSHSGLVDEGWNYFQSMKQKYGISPSPDHFACMV 248
A+ F M G PD+V+ ++ A S + G + K+GI + ++
Sbjct: 336 AINHFQDMQDSGQKPDQVSVLNMIAASGRSANLLAGME-VHAYAIKHGIDSNMHIGNSLI 394
Query: 249 DLLSRS---GHLGDAYELM 264
D+ + ++G A+E M
Sbjct: 395 DMYGKCCCVKYMGSAFEYM 413
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 62/247 (25%), Positives = 102/247 (41%), Gaps = 16/247 (6%)
Query: 41 TTMIDGYAKAGDMAAARFLFEQATEKDVVAWSALISGYVQNGQPNQALKVFLEMESKNVK 100
T + Y K G A +F++ +E+ + W+A+I V G+ +A++++ EM V
Sbjct: 86 TKFVHMYGKCGSFYDAVKVFDKMSERTIFTWNAMIGACVSAGRYVEAIELYKEMRVLGVS 145
Query: 101 PDEFILVSLMSATSQLGHLELAQWVDSYVSKSSIDLQQDHVIAALLDMNAKCGNMDRALK 160
D F ++ A L + K V AL+ M AKCG++ A
Sbjct: 146 LDAFTFPCVLKACGAFKERRLGCEIHGVAVKCGYG-GFVFVCNALIAMYAKCGDLGGARV 204
Query: 161 LFKE--MPKRDLVSYCSMIQGLSIHGCGEDAVRLFNSMLMEGLVPDEVAFTIILTACSHS 218
LF M K D VS+ S+I G +A+ LF M G+ + F L AC
Sbjct: 205 LFDSGLMEKDDPVSWNSIISAHVGEGESLEALSLFRRMQEVGVESNTYTFVSALQAC--- 261
Query: 219 GLVDEGWNYFQSMKQKYGISPSPDHFA------CMVDLLSRSGHLGDAYELMKSMHEPHA 272
EG + + + + + +HF ++ + + G + DA + KSM
Sbjct: 262 ----EGPTFIKIGRGIHAVILKSNHFTDVYVSNALIAMYANCGQMEDAERVFKSMLFKDC 317
Query: 273 GAWGALL 279
+W LL
Sbjct: 318 VSWNTLL 324
Score = 62.0 bits (149), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 36/144 (25%), Positives = 75/144 (52%), Gaps = 3/144 (2%)
Query: 42 TMIDGYAKAGDMAAARFLFEQATEKDVVAWSALISGYVQNGQPNQALKVFLEMESKNVKP 101
+++D YA+ G M AR +F ++D++ W+++I+ +G A+ +F +M +NV P
Sbjct: 593 SLVDMYARCGTMENARNIFNYVKQRDLILWTSMINANGMHGCGKDAIDLFSKMTDENVLP 652
Query: 102 DEFILVSLMSATSQLGH-LELAQWVDSYVSKSSIDLQQDHVIAALLDMNAKCGNMDRALK 160
D ++L+ A S G +E Q + ++ ++ +H A L+D+ A+ +++ A
Sbjct: 653 DHITFLALLYACSHSGLVVEGKQHFEIMKNEYKLEPWPEHY-ACLVDLLARSNSLEEAYH 711
Query: 161 LFKEMPKRDLVS-YCSMIQGLSIH 183
+ MP +C+++ IH
Sbjct: 712 FVRNMPIEPSAEVWCALLGACRIH 735
>Medtr6g059820.1 | PPR containing plant-like protein | HC |
chr6:20520961-20518530 | 20130731
Length = 528
Score = 256 bits (655), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 128/338 (37%), Positives = 201/338 (59%), Gaps = 14/338 (4%)
Query: 20 GDLSSARGVFDAMPEKNVVSFTTMIDGYAKAGDMAAARFLFEQATEKDVVAWSALISGYV 79
G L A VFD M E+N+V FT ++ GY + GD+ +F++ ++DV AW+A+ISG
Sbjct: 150 GGLRDAHKVFDEMSERNIVVFTVLVSGYLRVGDVEKGLMVFDEMVDRDVPAWNAVISGCT 209
Query: 80 QNGQPNQALKVFLEME----------SKNVKPDEFILVSLMSATSQLGHLELAQWVDSYV 129
QNG ++ +++F EM K KP++ +V ++SA G L+L +W+ YV
Sbjct: 210 QNGFFSEGIRLFREMVFAAGLGEGGFCKGNKPNQVTVVCVLSACGHGGMLQLGKWIHGYV 269
Query: 130 SKSSIDLQQDHVIAALLDMNAKCGNMDRALKLFKEMPKRDLVSYCSMIQGLSIHGCGEDA 189
+ + V AL+DM KCG+++ A K+F+ ++ L S+ SMI ++HG EDA
Sbjct: 270 YRHGF-VVDSFVSNALVDMYGKCGSLELARKVFEMDQRKGLTSWNSMINCYALHGKCEDA 328
Query: 190 VRLFNSMLM--EGLVPDEVAFTIILTACSHSGLVDEGWNYFQSMKQKYGISPSPDHFACM 247
+ F M+ G+ PDEV F +L AC+H GLV++G YF+ M ++YGI P H+ C+
Sbjct: 329 ITFFEKMVECGGGVRPDEVTFIGLLNACTHGGLVEQGCGYFEMMIKEYGIEPQIAHYGCL 388
Query: 248 VDLLSRSGHLGDAYELMKSMH-EPHAGAWGALLGACKLHGDSDLGEIVANQLFELEPQNA 306
+DLL R+G +A +++K M EP WG+LL CK+HG +DL E A +L E++P N
Sbjct: 389 IDLLGRAGQFDEAMDVVKGMSMEPDEVVWGSLLNGCKVHGRTDLAEFAAKKLVEIDPHNG 448
Query: 307 ANYILLSNIYAAAERWIDVSLVRSRMRERSVQKIPGCS 344
+L+NIY +W ++ V S+++++ KIPGCS
Sbjct: 449 GYGTMLANIYGQLGKWDEMRNVWSKLKQQKSYKIPGCS 486
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 57/277 (20%), Positives = 120/277 (43%), Gaps = 43/277 (15%)
Query: 52 DMAAARFLFEQATEKDVVAWSALISGYVQNGQPNQALKVFLEMESKNVKPDEFILVSLMS 111
++ A +F ++ ++A+I+ + + Q + K+F M + N++P+ FI ++
Sbjct: 54 NLHYAHQIFNHIHSPNIYLFTAIITAF--SSQQHTTFKLFKTMLNSNIRPNNFIYPHVLK 111
Query: 112 ATSQ-----LGHLELAQ------------WVDSYVSKSSIDLQQDH------------VI 142
+ + L H ++ + VDSY SK L+ H V
Sbjct: 112 SVKERFLVDLVHAQIVKCGFLNYPVVETSLVDSY-SKVLGGLRDAHKVFDEMSERNIVVF 170
Query: 143 AALLDMNAKCGNMDRALKLFKEMPKRDLVSYCSMIQGLSIHGCGEDAVRLFNSMLM---- 198
L+ + G++++ L +F EM RD+ ++ ++I G + +G + +RLF M+
Sbjct: 171 TVLVSGYLRVGDVEKGLMVFDEMVDRDVPAWNAVISGCTQNGFFSEGIRLFREMVFAAGL 230
Query: 199 ------EGLVPDEVAFTIILTACSHSGLVDEGWNYFQSMKQKYGISPSPDHFACMVDLLS 252
+G P++V +L+AC H G++ G + ++G +VD+
Sbjct: 231 GEGGFCKGNKPNQVTVVCVLSACGHGGMLQLG-KWIHGYVYRHGFVVDSFVSNALVDMYG 289
Query: 253 RSGHLGDAYELMKSMHEPHAGAWGALLGACKLHGDSD 289
+ G L A ++ + +W +++ LHG +
Sbjct: 290 KCGSLELARKVFEMDQRKGLTSWNSMINCYALHGKCE 326
>Medtr7g023780.1 | editing factor 22 | HC | chr7:7790817-7787040 |
20130731
Length = 719
Score = 256 bits (655), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 139/382 (36%), Positives = 216/382 (56%), Gaps = 43/382 (11%)
Query: 4 RNVASWNAMLCGFVKDGDLSSARGVFDAMPEKNV----VSFTTMIDGY------------ 47
R + SW A++ G+ ++G+ A +FD M + +V +S +++ Y
Sbjct: 209 RTIVSWTAIVSGYGQNGEPWEALRMFDQMRKTDVKPDWISLVSVMRAYTDVDDLEQGRSL 268
Query: 48 -----------------------AKAGDMAAARFLFEQ-ATEKDVVAWSALISGYVQNGQ 83
AK G++ A+ F++ T V+ W+A+ISGY +NG
Sbjct: 269 HGCIIKMGLEEEPDLLISLTAFYAKCGEVTVAKSFFDKMKTPNKVMMWNAMISGYAKNGH 328
Query: 84 PNQALKVFLEMESKNVKPDEFILVSLMSATSQLGHLELAQWVDSYVSKSSIDLQQDHVIA 143
+A+++F M S+N+KPD L S + A +Q+G L+LAQW+D YV KS V
Sbjct: 329 AEEAVELFQAMISRNIKPDSITLRSAVLACAQVGSLKLAQWMDDYVRKSKYG-GDIFVNT 387
Query: 144 ALLDMNAKCGNMDRALKLFKEMPKRDLVSYCSMIQGLSIHGCGEDAVRLFNSMLMEGLVP 203
L+DM AKCG+++ A +F +D+V + +MI G +HG G +A+ L+++M EG+ P
Sbjct: 388 TLIDMYAKCGSVESARLVFDRASVKDVVMWSAMIMGYGLHGQGWEAIYLYHAMKQEGVCP 447
Query: 204 DEVAFTIILTACSHSGLVDEGWNYFQSMKQKYGISPSPDHFACMVDLLSRSGHLGDAYEL 263
++V F +LTACSHSGL+ +GW F M+ +GI P +H++C+VDLL R+G+L AY
Sbjct: 448 NDVTFIGLLTACSHSGLIKQGWELFHCMRD-FGIKPRNEHYSCVVDLLGRAGYLKQAYVF 506
Query: 264 MKSMH-EPHAGAWGALLGACKLHGDSDLGEIVANQLFELEPQNAANYILLSNIYAAAERW 322
+ M EP WGALL ACK+H LGE A +LF L+P N +Y+ LSN+YA++ W
Sbjct: 507 ILKMPIEPGVSVWGALLSACKIHRCVTLGEYAAQKLFSLDPYNTGHYVQLSNLYASSRMW 566
Query: 323 IDVSLVRSRMRERSVQKIPGCS 344
V+ +R M+E+ + K G S
Sbjct: 567 DRVAYIRVLMKEKGLTKYLGYS 588
Score = 112 bits (280), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 75/244 (30%), Positives = 126/244 (51%), Gaps = 9/244 (3%)
Query: 47 YAKAGDMAAARFLFEQATEKDVVAWSALISGYVQNGQPNQALKVFLEMESKNVKPDEFIL 106
YAK G + AR +F++ ++ +V+W+A++SGY QNG+P +AL++F +M +VKPD L
Sbjct: 190 YAKCGRIGMARMVFDRLYDRTIVSWTAIVSGYGQNGEPWEALRMFDQMRKTDVKPDWISL 249
Query: 107 VSLMSATSQLGHLELAQWVDSYVSKSSIDLQQDHVIAALLDMNAKCGNMDRALKLFKEMP 166
VS+M A + + LE + + + K ++ + D +I +L AKCG + A F +M
Sbjct: 250 VSVMRAYTDVDDLEQGRSLHGCIIKMGLEEEPDLLI-SLTAFYAKCGEVTVAKSFFDKMK 308
Query: 167 KRDLV-SYCSMIQGLSIHGCGEDAVRLFNSMLMEGLVPDEVAFTIILTACSHSG-LVDEG 224
+ V + +MI G + +G E+AV LF +M+ + PD + + AC+ G L
Sbjct: 309 TPNKVMMWNAMISGYAKNGHAEEAVELFQAMISRNIKPDSITLRSAVLACAQVGSLKLAQ 368
Query: 225 WNYFQSMKQKYGISPSPDHF--ACMVDLLSRSGHLGDAYELMKSMHEPHAGAWGALLGAC 282
W K KYG D F ++D+ ++ G + A + W A++
Sbjct: 369 WMDDYVRKSKYG----GDIFVNTTLIDMYAKCGSVESARLVFDRASVKDVVMWSAMIMGY 424
Query: 283 KLHG 286
LHG
Sbjct: 425 GLHG 428
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 56/259 (21%), Positives = 118/259 (45%), Gaps = 7/259 (2%)
Query: 34 EKNVVSFTTMIDGYAKAGDMAAARFLFEQATEKDVVAWSALISGYVQNGQPNQALKVFLE 93
+ N T +++ + G + AR LF++ + D+ W+A+I Y +N ++++
Sbjct: 76 QHNRFLMTKLVNQSSNLGQIFYARKLFDEFPDPDLFMWNAIIRTYSRNNMYRNVIEMYRW 135
Query: 94 MESKNVKPDEFILVSLMSATSQLGHLELAQWVDSYVSKSSIDLQQDHVIA--ALLDMNAK 151
M+ + PD+F ++ A S+L L+ V ++V HV L+ + AK
Sbjct: 136 MKWVGLHPDKFTFPCVLKACSELLDFGLSCLVHAHVIVYGFG---SHVFVQNGLVALYAK 192
Query: 152 CGNMDRALKLFKEMPKRDLVSYCSMIQGLSIHGCGEDAVRLFNSMLMEGLVPDEVAFTII 211
CG + A +F + R +VS+ +++ G +G +A+R+F+ M + PD ++ +
Sbjct: 193 CGRIGMARMVFDRLYDRTIVSWTAIVSGYGQNGEPWEALRMFDQMRKTDVKPDWISLVSV 252
Query: 212 LTACSHSGLVDEGWNYFQSMKQKYGISPSPDHFACMVDLLSRSGHLGDAYELMKSMHEPH 271
+ A + +++G + K G+ PD + ++ G + A M P+
Sbjct: 253 MRAYTDVDDLEQGRS-LHGCIIKMGLEEEPDLLISLTAFYAKCGEVTVAKSFFDKMKTPN 311
Query: 272 -AGAWGALLGACKLHGDSD 289
W A++ +G ++
Sbjct: 312 KVMMWNAMISGYAKNGHAE 330
>Medtr3g011950.1 | pentatricopeptide (PPR) repeat protein | HC |
chr3:3128021-3130773 | 20130731
Length = 810
Score = 256 bits (653), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 138/385 (35%), Positives = 214/385 (55%), Gaps = 42/385 (10%)
Query: 1 MPQRNVASWNAMLCGFVKDGDLSSARGVFDAMPEK------------------------- 35
M +NV SWN ++ G ++G+ A F M E+
Sbjct: 297 MSSKNVVSWNTVIDGLAQNGESEEAFATFLKMFEEKVEPTNVSMMGALHACSNLGDLERG 356
Query: 36 --------------NVVSFTTMIDGYAKAGDMAAARFLFEQATEKDVVAWSALISGYVQN 81
NV ++I Y+K + A +F+ K V W+A+I GY QN
Sbjct: 357 KFVHRLLDQMKLSSNVSVMNSLISMYSKCKRVDIAASVFDNLEGKTNVTWNAMILGYAQN 416
Query: 82 GQPNQALKVFLEMESKNVKPDEFILVSLMSATSQLGHLELAQWVDSYVSKSSIDLQQDHV 141
G N+AL +F M+S+ +KPD F VS+++A + L A+W+ ++++D V
Sbjct: 417 GCVNEALNLFCTMQSQGIKPDSFTFVSVITALADLSVTRQAKWIHGLAIRTNMDTNV-FV 475
Query: 142 IAALLDMNAKCGNMDRALKLFKEMPKRDLVSYCSMIQGLSIHGCGEDAVRLFNSMLMEG- 200
AL+DM AKCG ++ A +LF M +R ++++ +MI G HG G+ A+ LF+ M E
Sbjct: 476 ATALVDMYAKCGAIETARELFDMMQERHVITWNAMIDGYGTHGLGKAALDLFDDMQNEAS 535
Query: 201 LVPDEVAFTIILTACSHSGLVDEGWNYFQSMKQKYGISPSPDHFACMVDLLSRSGHLGDA 260
L P+++ F +++ACSHSG V+EG YF+ MK+ YG+ PS DH+ MVDLL R+G L DA
Sbjct: 536 LKPNDITFLSVISACSHSGFVEEGLYYFKIMKEGYGLEPSMDHYGAMVDLLGRAGKLDDA 595
Query: 261 YELMKSMH-EPHAGAWGALLGACKLHGDSDLGEIVANQLFELEPQNAANYILLSNIYAAA 319
++ + M +P GA+LGACK+H + +LGE A++LFEL+P Y+L++N+YA+A
Sbjct: 596 WKFIHEMPIKPGITVLGAMLGACKIHKNIELGEKAADRLFELDPDEGGYYMLVANMYASA 655
Query: 320 ERWIDVSLVRSRMRERSVQKIPGCS 344
W V+ VR+ M ++ + K PGCS
Sbjct: 656 SMWDKVAKVRTAMEKKGLHKTPGCS 680
Score = 122 bits (307), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 80/329 (24%), Positives = 149/329 (45%), Gaps = 49/329 (14%)
Query: 1 MPQRNVASWNAMLCGFVKDG-----------------------------------DLSSA 25
MP+R++ WN ++ G+ ++G L
Sbjct: 196 MPERDLVCWNTVVAGYAQNGFARKALKLVLDMQEDGKKADSITLVSVLPAVADVKGLRIG 255
Query: 26 RGV--------FDAMPEKNVVSFTTMIDGYAKAGDMAAARFLFEQATEKDVVAWSALISG 77
R V FD+M V T ++D Y K G++ R +F++ + K+VV+W+ +I G
Sbjct: 256 RSVHGYAVRLGFDSM----VNVSTALLDMYFKCGEVETGRLVFQRMSSKNVVSWNTVIDG 311
Query: 78 YVQNGQPNQALKVFLEMESKNVKPDEFILVSLMSATSQLGHLELAQWVDSYVSKSSIDLQ 137
QNG+ +A FL+M + V+P ++ + A S LG LE ++V + + +
Sbjct: 312 LAQNGESEEAFATFLKMFEEKVEPTNVSMMGALHACSNLGDLERGKFVHRLLDQMKLS-S 370
Query: 138 QDHVIAALLDMNAKCGNMDRALKLFKEMPKRDLVSYCSMIQGLSIHGCGEDAVRLFNSML 197
V+ +L+ M +KC +D A +F + + V++ +MI G + +GC +A+ LF +M
Sbjct: 371 NVSVMNSLISMYSKCKRVDIAASVFDNLEGKTNVTWNAMILGYAQNGCVNEALNLFCTMQ 430
Query: 198 MEGLVPDEVAFTIILTACSHSGLVDEGWNYFQSMKQKYGISPSPDHFACMVDLLSRSGHL 257
+G+ PD F ++TA + + + + + + + + +VD+ ++ G +
Sbjct: 431 SQGIKPDSFTFVSVITALADLSVTRQA-KWIHGLAIRTNMDTNVFVATALVDMYAKCGAI 489
Query: 258 GDAYELMKSMHEPHAGAWGALLGACKLHG 286
A EL M E H W A++ HG
Sbjct: 490 ETARELFDMMQERHVITWNAMIDGYGTHG 518
Score = 110 bits (276), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 67/246 (27%), Positives = 127/246 (51%), Gaps = 2/246 (0%)
Query: 34 EKNVVSFTTMIDGYAKAGDMAAARFLFEQATEKDVVAWSALISGYVQNGQPNQALKVFLE 93
E N+ + T++++ YAK + A +F + E+D+V W+ +++GY QNG +ALK+ L+
Sbjct: 167 ESNLFAMTSVVNLYAKCRKIDDAYKMFVRMPERDLVCWNTVVAGYAQNGFARKALKLVLD 226
Query: 94 MESKNVKPDEFILVSLMSATSQLGHLELAQWVDSYVSKSSIDLQQDHVIAALLDMNAKCG 153
M+ K D LVS++ A + + L + + V Y + D +V ALLDM KCG
Sbjct: 227 MQEDGKKADSITLVSVLPAVADVKGLRIGRSVHGYAVRLGFD-SMVNVSTALLDMYFKCG 285
Query: 154 NMDRALKLFKEMPKRDLVSYCSMIQGLSIHGCGEDAVRLFNSMLMEGLVPDEVAFTIILT 213
++ +F+ M +++VS+ ++I GL+ +G E+A F M E + P V+ L
Sbjct: 286 EVETGRLVFQRMSSKNVVSWNTVIDGLAQNGESEEAFATFLKMFEEKVEPTNVSMMGALH 345
Query: 214 ACSHSGLVDEGWNYFQSMKQKYGISPSPDHFACMVDLLSRSGHLGDAYELMKSMHEPHAG 273
ACS+ G ++ G + + + +S + ++ + S+ + A + ++
Sbjct: 346 ACSNLGDLERG-KFVHRLLDQMKLSSNVSVMNSLISMYSKCKRVDIAASVFDNLEGKTNV 404
Query: 274 AWGALL 279
W A++
Sbjct: 405 TWNAMI 410
Score = 68.6 bits (166), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 57/269 (21%), Positives = 121/269 (44%), Gaps = 4/269 (1%)
Query: 41 TTMIDGYAKAGDMAAARFLFEQATEKDVVAWSALISGYVQNGQPNQALKVFLEMESKNVK 100
T +I + K G + A +F+ K V + L+ GYV+N +++L F M++ V+
Sbjct: 73 TKLISLFCKFGTINEALRVFDSVETKLDVLYHTLLKGYVKNSSLSESLSFFKRMQNDEVE 132
Query: 101 PDEFILVSLMSATSQLGHLELAQWVDSYVSKSSIDLQQDHVIAALLDMNAKCGNMDRALK 160
P + L+ + L+ V + K+ + + +++++ AKC +D A K
Sbjct: 133 PVVYDFTYLLQLCGENFDLKKGMEVHGMLIKNGFE-SNLFAMTSVVNLYAKCRKIDDAYK 191
Query: 161 LFKEMPKRDLVSYCSMIQGLSIHGCGEDAVRLFNSMLMEGLVPDEVAFTIILTACSHSGL 220
+F MP+RDLV + +++ G + +G A++L M +G D + +L A +
Sbjct: 192 MFVRMPERDLVCWNTVVAGYAQNGFARKALKLVLDMQEDGKKADSITLVSVLPAVADVKG 251
Query: 221 VDEGWNYFQSMKQKYGISPSPDHFACMVDLLSRSGHLGDAYELMKSMHEPHAGAWGALLG 280
+ G + + G + ++D+ + G + + + M + +W ++
Sbjct: 252 LRIGRS-VHGYAVRLGFDSMVNVSTALLDMYFKCGEVETGRLVFQRMSSKNVVSWNTVID 310
Query: 281 ACKLHGDSDLGEIVANQLFE--LEPQNAA 307
+G+S+ ++FE +EP N +
Sbjct: 311 GLAQNGESEEAFATFLKMFEEKVEPTNVS 339
>Medtr1g038860.1 | PPR containing plant-like protein | LC |
chr1:14313044-14316621 | 20130731
Length = 625
Score = 254 bits (650), Expect = 7e-68, Method: Compositional matrix adjust.
Identities = 128/348 (36%), Positives = 219/348 (62%), Gaps = 5/348 (1%)
Query: 1 MPQRNVASWNAMLCGFVKDGDLSSARGVFDAMPEKNVVSFTTMIDGYAKAGDMAAARFLF 60
MP RNV SWNAM+ G+ ++G A +F+ MPE+++ S+ TM+ G+ + GD+ A LF
Sbjct: 227 MPIRNVVSWNAMIAGYAQNGRFDEALKLFERMPERDMPSWNTMVTGFIQNGDLNRAEQLF 286
Query: 61 EQATEKDVVAWSALISGYVQNGQPNQALKVFLEMESKN-VKPDEFILVSLMSATSQLGHL 119
+K+V+ W+A+++GYVQ+G +ALK+F +M++ + +KP V+++ A S L L
Sbjct: 287 HAMPQKNVITWTAMMTGYVQHGLSEEALKLFNKMQANDGLKPTTGTFVTVLGACSDLAGL 346
Query: 120 ELAQWVDSYVSKSSIDLQQDHVIAALLDMNAKCGNMDRALKLFKE--MPKRDLVSYCSMI 177
Q + +SK+ + +V++AL++M +KCG+ A K+F + DL+++ MI
Sbjct: 347 PEGQQIHQMISKTVFQ-ESTYVVSALINMYSKCGDFHVAKKMFDDGLSGHMDLIAWNGMI 405
Query: 178 QGLSIHGCGEDAVRLFNSMLMEGLVPDEVAFTIILTACSHSGLVDEGWNYFQSMKQKYGI 237
+ HG G +A+ LFN M G ++V + +LTACSH+GL DEG+ YF + + I
Sbjct: 406 AAYAHHGYGNEAINLFNKMQELGFQANDVTYVGLLTACSHAGLFDEGFKYFDELLKNRYI 465
Query: 238 SPSPDHFACMVDLLSRSGHLGDAYELMKSM-HEPHAGAWGALLGACKLHGDSDLGEIVAN 296
DH+ C++DL R+G L +A +++ + E WGALL C +HG++D+G++VA+
Sbjct: 466 QVREDHYTCLIDLCGRAGRLDEALNIIEGLGKEVSLSLWGALLAGCSVHGNADIGKLVAD 525
Query: 297 QLFELEPQNAANYILLSNIYAAAERWIDVSLVRSRMRERSVQKIPGCS 344
++ ++EP+NA Y+L SN+YA+ + + VR +M+++ ++K PGCS
Sbjct: 526 KVLKMEPENADTYLLASNMYASVGMREEAANVRMKMKKKGLKKQPGCS 573
Score = 134 bits (338), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 91/316 (28%), Positives = 160/316 (50%), Gaps = 14/316 (4%)
Query: 1 MPQRNVASWNAMLCGFVKDGDLSSARGVFDAMPEKNVVSFTTMIDGYAKAGDMAAARFLF 60
MP RNV SWN M+ G+ ++G A +F MPE+NVVS+ T++ A G + A LF
Sbjct: 134 MPVRNVVSWNTMIDGYARNGRTQEALDLFGRMPERNVVSWNTVMTALAHCGRIDDAERLF 193
Query: 61 EQATEKDVVAWSALISGYVQNGQPNQALKVFLEMESKNVKPDEFILVSLMSATSQLGHLE 120
+ E+DVV+W+ +++G +NG+ + A +VF +M +NV ++++ +Q G +
Sbjct: 194 NEMRERDVVSWTTMVAGLSKNGRVDAAREVFDKMPIRNVVS----WNAMIAGYAQNGRFD 249
Query: 121 LAQWVDSYVSKSSIDLQQDHVIAALLDMNAKCGNMDRALKLFKEMPKRDLVSYCSMIQGL 180
A + + + + V + + G+++RA +LF MP+++++++ +M+ G
Sbjct: 250 EALKLFERMPERDMPSWNTMVTGFIQN-----GDLNRAEQLFHAMPQKNVITWTAMMTGY 304
Query: 181 SIHGCGEDAVRLFNSMLM-EGLVPDEVAFTIILTACSHSGLVDEGWNYFQSMKQKYGISP 239
HG E+A++LFN M +GL P F +L ACS + EG Q M K
Sbjct: 305 VQHGLSEEALKLFNKMQANDGLKPTTGTFVTVLGACSDLAGLPEGQQIHQ-MISKTVFQE 363
Query: 240 SPDHFACMVDLLSRSGHLGDAYELMKSMHEPHAG--AWGALLGACKLHGDSDLGEIVANQ 297
S + ++++ S+ G A ++ H AW ++ A HG + + N+
Sbjct: 364 STYVVSALINMYSKCGDFHVAKKMFDDGLSGHMDLIAWNGMIAAYAHHGYGNEAINLFNK 423
Query: 298 LFELEPQ-NAANYILL 312
+ EL Q N Y+ L
Sbjct: 424 MQELGFQANDVTYVGL 439
Score = 114 bits (284), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 79/281 (28%), Positives = 149/281 (53%), Gaps = 19/281 (6%)
Query: 10 NAMLCGFVKDGDLSSARGVFDAMPEKNVVSFTTMIDGYAKAGDMAAARFLFEQA-TEKDV 68
N + ++G ++ AR VFD M +++ +TTMI GY K G + AR LF++ +K V
Sbjct: 49 NYFISKLCREGKVNEARKVFDEMSKRDSCLWTTMISGYIKCGLINEARKLFDRPDAQKSV 108
Query: 69 VAWSALISGYVQNGQPNQALKVFLEMESKNVKPDEFILVSLMSATSQLGHLELAQWVDSY 128
+ W+A++SGY++ + +A ++F EM +NV +++ ++ G + A +
Sbjct: 109 IVWTAMVSGYIKMNRIEEAERLFNEMPVRNVVS----WNTMIDGYARNGRTQEALDLFGR 164
Query: 129 VSKSSIDLQQDHVIAALLDMNAKCGNMDRALKLFKEMPKRDLVSYCSMIQGLSIHGCGED 188
+ + ++ + + V+ AL A CG +D A +LF EM +RD+VS+ +M+ GLS +G +
Sbjct: 165 MPERNV-VSWNTVMTAL----AHCGRIDDAERLFNEMRERDVVSWTTMVAGLSKNGRVDA 219
Query: 189 AVRLFNSMLMEGLVPDEVAFTIILTACSHSGLVDEGWNYFQSMKQKYGISPSPDHFACMV 248
A +F+ M + + V++ ++ + +G DE F+ M ++ PS + MV
Sbjct: 220 AREVFDKMPIRNV----VSWNAMIAGYAQNGRFDEALKLFERMPER--DMPS---WNTMV 270
Query: 249 DLLSRSGHLGDAYELMKSMHEPHAGAWGALLGACKLHGDSD 289
++G L A +L +M + + W A++ HG S+
Sbjct: 271 TGFIQNGDLNRAEQLFHAMPQKNVITWTAMMTGYVQHGLSE 311
>Medtr2g087120.1 | PPR containing plant-like protein | HC |
chr2:36618951-36617398 | 20130731
Length = 517
Score = 254 bits (649), Expect = 9e-68, Method: Compositional matrix adjust.
Identities = 137/331 (41%), Positives = 204/331 (61%), Gaps = 2/331 (0%)
Query: 10 NAMLCGFVKDGDLSSARGVFDAMPEKNVVSFTTMIDGYAKAGDMAAARFLFEQATEKDVV 69
A++ + K G L AR VFD M +N+VS+ TMIDGY K GD+ A LF++ K+VV
Sbjct: 130 TALIDMYAKCGKLDYARLVFDQMGVRNLVSWNTMIDGYMKNGDVDDALKLFDKLPVKNVV 189
Query: 70 AWSALISGYVQNGQPNQALKVFLEMESKNVKPDEFILVSLMSATSQLGHLELAQWVDSYV 129
+W+ +I G+V+ +AL+ F EM+ V PD +++++SA + LG L L WV V
Sbjct: 190 SWTVVIGGFVKKECYEEALECFREMQLAGVVPDFVTVIAIISACANLGALGLGLWVHRLV 249
Query: 130 SKSSIDLQQDHVIAALLDMNAKCGNMDRALKLFKEMPKRDLVSYCSMIQGLSIHGCGEDA 189
K V+ +L+DM A+CG ++ A ++F M +R+LVS+ S+I G +++G + A
Sbjct: 250 MKKEFR-DNVKVLNSLIDMYARCGCIELARQVFDGMSQRNLVSWNSIIVGFAVNGLADKA 308
Query: 190 VRLFNSMLMEGLVPDEVAFTIILTACSHSGLVDEGWNYFQSMKQKYGISPSPDHFACMVD 249
+ F SM EGL P+ V++T LTACSH+GL+DEG F +K+ + SP +H+ C+VD
Sbjct: 309 LSFFRSMKKEGLEPNGVSYTSALTACSHAGLIDEGLKIFADIKRDHRNSPRIEHYGCLVD 368
Query: 250 LLSRSGHLGDAYELMKSMH-EPHAGAWGALLGACKLHGDSDLGEIVANQLFELEPQNAAN 308
L SR+G L +A++++K M P+ G+LL AC+ GD +L E V EL P +N
Sbjct: 369 LYSRAGRLKEAWDVIKKMPMMPNEVVLGSLLAACRTQGDVELAEKVMKYQVELYPGGDSN 428
Query: 309 YILLSNIYAAAERWIDVSLVRSRMRERSVQK 339
Y+L SNIYAA +W S VR M+ER +QK
Sbjct: 429 YVLFSNIYAAVGKWDGASKVRREMKERGLQK 459
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 62/266 (23%), Positives = 121/266 (45%), Gaps = 37/266 (13%)
Query: 59 LFEQATEKDVVAWSALISGYVQNGQPNQALKVFLEMESKNVKPDEFILVSLMSATSQ--- 115
L + V+W++ IS + +N +A F++M V+P+ L++L+SA +
Sbjct: 43 LKHKPNSNQTVSWTSSISHHCKNNNFLKAASEFIQMLEAEVEPNHITLITLLSACAHSPS 102
Query: 116 LGHLELAQWVDSYVSKSSIDLQQDHVIAALLDMNAKCGNMDR------------------ 157
+ + ++ K + V AL+DM AKCG +D
Sbjct: 103 KTSITFGAALHTHAFKHGFAMNDVMVGTALIDMYAKCGKLDYARLVFDQMGVRNLVSWNT 162
Query: 158 -------------ALKLFKEMPKRDLVSYCSMIQGLSIHGCGEDAVRLFNSMLMEGLVPD 204
ALKLF ++P +++VS+ +I G C E+A+ F M + G+VPD
Sbjct: 163 MIDGYMKNGDVDDALKLFDKLPVKNVVSWTVVIGGFVKKECYEEALECFREMQLAGVVPD 222
Query: 205 EVAFTIILTACSHSGLVDEG-WNYFQSMKQKYGISPSPDHFACMVDLLSRSGHLGDAYEL 263
V I++AC++ G + G W + MK+++ + ++D+ +R G + A ++
Sbjct: 223 FVTVIAIISACANLGALGLGLWVHRLVMKKEF--RDNVKVLNSLIDMYARCGCIELARQV 280
Query: 264 MKSMHEPHAGAWGALLGACKLHGDSD 289
M + + +W +++ ++G +D
Sbjct: 281 FDGMSQRNLVSWNSIIVGFAVNGLAD 306
Score = 58.9 bits (141), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 49/179 (27%), Positives = 86/179 (48%), Gaps = 14/179 (7%)
Query: 1 MPQRNVASWNAMLCGFVKDGDLSSARGVFDAMP----EKNVVSFTTMIDGYAKAGDMAAA 56
M QRN+ SWN+++ GF +G A F +M E N VS+T+ + + AG +
Sbjct: 284 MSQRNLVSWNSIIVGFAVNGLADKALSFFRSMKKEGLEPNGVSYTSALTACSHAGLIDEG 343
Query: 57 RFLF-----EQATEKDVVAWSALISGYVQNGQPNQALKVFLEMESKNVKPDEFILVSLMS 111
+F + + + L+ Y + G+ +A V +M + P+E +L SL++
Sbjct: 344 LKIFADIKRDHRNSPRIEHYGCLVDLYSRAGRLKEAWDVIKKMP---MMPNEVVLGSLLA 400
Query: 112 ATSQLGHLELAQWVDSYVSKSSIDLQQDHVIAALLDMNAKCGNMDRALKLFKEMPKRDL 170
A G +ELA+ V Y + ++V+ + ++ A G D A K+ +EM +R L
Sbjct: 401 ACRTQGDVELAEKVMKYQVELYPGGDSNYVLFS--NIYAAVGKWDGASKVRREMKERGL 457
>Medtr1g059280.1 | pentatricopeptide (PPR) repeat protein | HC |
chr1:21515828-21518970 | 20130731
Length = 616
Score = 253 bits (647), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 145/392 (36%), Positives = 217/392 (55%), Gaps = 51/392 (13%)
Query: 1 MPQRNVASWNAMLCGFVKDGDLSSARGVFDAM----PEKNVVSFTT-------------- 42
MP+RNV SW AM+ + + G S A +F M E N +F T
Sbjct: 101 MPERNVVSWTAMISAYSQRGYASQALNLFLQMLRSGTEPNEFTFATVLTSCTSSLGFILG 160
Query: 43 ---------------------MIDGYAKAGDMAAARFLFEQATEKDVVAWSALISGYVQN 81
++D YAK G + AR +FE E+DVV+ +A+ISGY Q
Sbjct: 161 RQIHSLIIKLNYEDHVFVGSSLLDMYAKDGKIHEARTVFECLPERDVVSCTAIISGYAQL 220
Query: 82 GQPNQALKVFLEMESKNVKPDEFILVSLMSATSQLGHLELAQWVDSYVSKSSID----LQ 137
G +AL++F ++ + +K + +++A S L L+L + V ++V +S I LQ
Sbjct: 221 GLDEEALELFRRLQGEGMKSNYVTYTGVLTALSGLAALDLGKQVHNHVLRSEIPSFVVLQ 280
Query: 138 QDHVIAALLDMNAKCGNMDRALKLFKEMPKRDLVSYCSMIQGLSIHGCGEDAVRLFNSML 197
+L+DM +KCGN+ + ++F M +R ++S+ +M+ G S HG G + ++LF M
Sbjct: 281 N-----SLIDMYSKCGNLTYSRRIFDTMYERTVISWNAMLVGYSKHGEGREVLKLFTLMR 335
Query: 198 MEGLV-PDEVAFTIILTACSHSGLVDEGWNYFQSMKQ-KYGISPSPDHFACMVDLLSRSG 255
E V PD V +L+ CSH GL D+G N F M K + P +H+ C+VDLL RSG
Sbjct: 336 EETKVKPDSVTILAVLSGCSHGGLEDKGLNIFNDMSSGKIEVEPKMEHYGCVVDLLGRSG 395
Query: 256 HLGDAYELMKSM-HEPHAGAWGALLGACKLHGDSDLGEIVANQLFELEPQNAANYILLSN 314
+ +A+E +K M EP A WG+LLGAC++H + D+GE QL E+EP NA NY++LSN
Sbjct: 396 RVEEAFEFIKKMPFEPTAAIWGSLLGACRVHSNVDIGEFAGQQLLEIEPGNAGNYVILSN 455
Query: 315 IYAAAERWIDVSLVRSRMRERSVQKIPGCSKL 346
+YA+A RW DVS +R M +++V K PG S +
Sbjct: 456 LYASAGRWEDVSSLRDLMLKKTVTKEPGRSSI 487
Score = 122 bits (306), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 81/253 (32%), Positives = 136/253 (53%), Gaps = 14/253 (5%)
Query: 41 TTMIDGYAKAGDMAAARFLFEQATEKDVVAWSALISGYVQNGQPNQALKVFLEMESKNVK 100
T +I Y K + A +F++ E++VV+W+A+IS Y Q G +QAL +FL+M +
Sbjct: 79 TRLIVLYTKCDSLGDAHNVFDEMPERNVVSWTAMISAYSQRGYASQALNLFLQMLRSGTE 138
Query: 101 PDEFILVS-LMSATSQLGHLELAQWVDSYVSKSSIDLQQDHVI--AALLDMNAKCGNMDR 157
P+EF + L S TS LG + L + + S + K + +DHV ++LLDM AK G +
Sbjct: 139 PNEFTFATVLTSCTSSLGFI-LGRQIHSLIIKLNY---EDHVFVGSSLLDMYAKDGKIHE 194
Query: 158 ALKLFKEMPKRDLVSYCSMIQGLSIHGCGEDAVRLFNSMLMEGLVPDEVAFTIILTACSH 217
A +F+ +P+RD+VS ++I G + G E+A+ LF + EG+ + V +T +LTA S
Sbjct: 195 ARTVFECLPERDVVSCTAIISGYAQLGLDEEALELFRRLQGEGMKSNYVTYTGVLTALSG 254
Query: 218 SGLVDEGWNYFQSMKQKYGISPSPDHFA---CMVDLLSRSGHLGDAYELMKSMHEPHAGA 274
+D G + + S P ++D+ S+ G+L + + +M+E +
Sbjct: 255 LAALDLGKQVHNHVLR----SEIPSFVVLQNSLIDMYSKCGNLTYSRRIFDTMYERTVIS 310
Query: 275 WGALLGACKLHGD 287
W A+L HG+
Sbjct: 311 WNAMLVGYSKHGE 323
>Medtr8g105720.1 | PPR containing plant-like protein | HC |
chr8:44583313-44585824 | 20130731
Length = 701
Score = 253 bits (645), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 135/386 (34%), Positives = 215/386 (55%), Gaps = 43/386 (11%)
Query: 1 MPQRNVASWNAMLCGFVKDG-----------------------DLSSARGVF----DAMP 33
MP R+V SWN ++ GF ++G LSS +F D
Sbjct: 186 MPVRDVVSWNTVIAGFAQNGMYVEALDMVREMGKNGKLKPDSFTLSSILPIFAEHVDVNK 245
Query: 34 EKNVVSF-------------TTMIDGYAKAGDMAAARFLFEQATEKDVVAWSALISGYVQ 80
K + + +++ID YAK + + F KD ++W+++I+G VQ
Sbjct: 246 GKEIHGYAVRNGFDGDVFIGSSLIDMYAKCNRLECSLRAFYILPRKDAISWNSIIAGCVQ 305
Query: 81 NGQPNQALKVFLEMESKNVKPDEFILVSLMSATSQLGHLELAQWVDSYVSKSSIDLQQDH 140
NG+ ++ L F M +NVKP S++ A + L L L + + + + D +
Sbjct: 306 NGEFDRGLGFFRRMLKENVKPMAVSFSSVIPACAHLTALSLGRQLHGCIVRLGFD-DNEF 364
Query: 141 VIAALLDMNAKCGNMDRALKLFKEMPKRDLVSYCSMIQGLSIHGCGEDAVRLFNSMLMEG 200
+ ++L+DM AKCGN+ A +F + KRD+V++ ++I G ++HG DAV LF +ML +G
Sbjct: 365 IASSLVDMYAKCGNIKMARYVFDRIDKRDMVAWTAIIMGCAMHGHALDAVSLFENMLEDG 424
Query: 201 LVPDEVAFTIILTACSHSGLVDEGWNYFQSMKQKYGISPSPDHFACMVDLLSRSGHLGDA 260
+ P VAF +LTACSH+GLVDEGW YF SM++ +GI+P +H+A + DLL R+G L +A
Sbjct: 425 VRPCYVAFMAVLTACSHAGLVDEGWRYFNSMERDFGIAPGLEHYAAVADLLGRAGRLEEA 484
Query: 261 YELMKSMH--EPHAGAWGALLGACKLHGDSDLGEIVANQLFELEPQNAANYILLSNIYAA 318
Y+ + +M +P W LL AC+ H +L E V ++L ++ +N Y+L+SNIY+A
Sbjct: 485 YDFISNMRGVQPTGSVWSILLAACRAHKSVELAEKVLDKLLSVDSENMGAYVLMSNIYSA 544
Query: 319 AERWIDVSLVRSRMRERSVQKIPGCS 344
A+RW D + +R MR++ ++K P CS
Sbjct: 545 AQRWKDAARLRIHMRKKGLKKTPACS 570
Score = 103 bits (256), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 72/278 (25%), Positives = 137/278 (49%), Gaps = 19/278 (6%)
Query: 10 NAMLCGFVKDGDLSSARGVFDAMPEKNVVSFTTMIDGYAKAGDMAAARFLFEQATEKDVV 69
NA++ + K +A VFD P++ + ID K DM R DVV
Sbjct: 149 NALINTYAK---FHNAGKVFDVFPKRG----ESGIDCVKKVFDMMPVR---------DVV 192
Query: 70 AWSALISGYVQNGQPNQALKVFLEM-ESKNVKPDEFILVSLMSATSQLGHLELAQWVDSY 128
+W+ +I+G+ QNG +AL + EM ++ +KPD F L S++ ++ + + + Y
Sbjct: 193 SWNTVIAGFAQNGMYVEALDMVREMGKNGKLKPDSFTLSSILPIFAEHVDVNKGKEIHGY 252
Query: 129 VSKSSIDLQQDHVIAALLDMNAKCGNMDRALKLFKEMPKRDLVSYCSMIQGLSIHGCGED 188
++ D + ++L+DM AKC ++ +L+ F +P++D +S+ S+I G +G +
Sbjct: 253 AVRNGFD-GDVFIGSSLIDMYAKCNRLECSLRAFYILPRKDAISWNSIIAGCVQNGEFDR 311
Query: 189 AVRLFNSMLMEGLVPDEVAFTIILTACSHSGLVDEGWNYFQSMKQKYGISPSPDHFACMV 248
+ F ML E + P V+F+ ++ AC+H + G + G + + +V
Sbjct: 312 GLGFFRRMLKENVKPMAVSFSSVIPACAHLTALSLG-RQLHGCIVRLGFDDNEFIASSLV 370
Query: 249 DLLSRSGHLGDAYELMKSMHEPHAGAWGALLGACKLHG 286
D+ ++ G++ A + + + AW A++ C +HG
Sbjct: 371 DMYAKCGNIKMARYVFDRIDKRDMVAWTAIIMGCAMHG 408
>Medtr6g075280.1 | pentatricopeptide (PPR) repeat protein | HC |
chr6:27881892-27885186 | 20130731
Length = 684
Score = 252 bits (643), Expect = 4e-67, Method: Compositional matrix adjust.
Identities = 126/322 (39%), Positives = 199/322 (61%), Gaps = 6/322 (1%)
Query: 28 VFDAMPEKNVVSFTTMIDGYAKAGDMAAARFLFEQ----ATEKDVVAWSALISGYVQNGQ 83
VFD + + + S + G ++ G + A +F++ E +VV W+++I+ VQNG+
Sbjct: 156 VFDEIDQTEIGSLNAFLTGLSRNGLVDTALDVFKKFKAGELELNVVTWTSIIASCVQNGK 215
Query: 84 PNQALKVFLEMESKNVKPDEFILVSLMSATSQLGHLELAQWVDSYVSKSSIDLQQDHVIA 143
+AL++F +M++ V+P+ + SL+ A + L + + + + I +V +
Sbjct: 216 DMEALELFRDMQADGVEPNAVTIPSLIPACGNISALTHGKEIHCFSLRKGI-FDDVYVGS 274
Query: 144 ALLDMNAKCGNMDRALKLFKEMPKRDLVSYCSMIQGLSIHGCGEDAVRLFNSMLMEGLVP 203
AL+DM A CG + + F EMP R+LVS+ S++ G ++HG ++ + +F+ ML G P
Sbjct: 275 ALIDMYANCGRIRLSQNCFDEMPFRNLVSWNSIMSGYAMHGKAKETIEMFHMMLQSGQKP 334
Query: 204 DEVAFTIILTACSHSGLVDEGWNYFQSMKQKYGISPSPDHFACMVDLLSRSGHLGDAYEL 263
D + FT +L+AC+ +GL +EGW+YF SM ++Y + P +H+ACMV LLSR G L +AY +
Sbjct: 335 DSITFTSVLSACTQNGLTEEGWHYFNSMSKEYDVKPKMEHYACMVTLLSRVGKLEEAYSI 394
Query: 264 MKSM-HEPHAGAWGALLGACKLHGDSDLGEIVANQLFELEPQNAANYILLSNIYAAAERW 322
+K M EP A WGALL +C++H + LGEI A +LF LEP N NYILLSNIYA+ W
Sbjct: 395 IKEMPFEPDACVWGALLSSCRVHHNLSLGEIAAEKLFVLEPDNPGNYILLSNIYASKGMW 454
Query: 323 IDVSLVRSRMRERSVQKIPGCS 344
+ + VR M+ + +QK PGCS
Sbjct: 455 DEENRVRDMMKSKGLQKNPGCS 476
Score = 99.4 bits (246), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 62/230 (26%), Positives = 126/230 (54%), Gaps = 8/230 (3%)
Query: 16 FVKDGDLSSARGVFDAMPEKNVVSFTTMIDGYAKAGDMAAARFLF----EQATEKDVVAW 71
++K + A+ +FD M +++V+ ++ MI GY++ G++ A+ +F ++ E ++V+W
Sbjct: 8 YLKCNRIDDAQKLFDGMCDRDVIVWSAMIAGYSRLGNVDRAKEVFCEMRKEGVEPNLVSW 67
Query: 72 SALISGYVQNGQPNQALKVFLEMESKNVKPDEFILVSLMSATSQLGHLELAQWVDSYVSK 131
+ +I+G+ G ++A+++F EM S+ PD + ++ L + + + V YV K
Sbjct: 68 NGMIAGFGNVGLYDEAVRLFHEMVSEGFLPDGSTVSCVLPGVGNLEDVLMGKQVHGYVIK 127
Query: 132 SSIDLQQD-HVIAALLDMNAKCGNMDRALKLFKEMPKRDLVSYCSMIQGLSIHGCGEDAV 190
+ L+ D +V++ALLDM +CG ++F E+ + ++ S + + GLS +G + A+
Sbjct: 128 --LGLESDKYVVSALLDMYGRCGCAPEMSRVFDEIDQTEIGSLNAFLTGLSRNGLVDTAL 185
Query: 191 RLFNSMLMEGLVPDEVAFTIILTACSHSGLVDEGWNYFQSMKQKYGISPS 240
+F L + V +T I+ +C +G E F+ M Q G+ P+
Sbjct: 186 DVFKKFKAGELELNVVTWTSIIASCVQNGKDMEALELFRDM-QADGVEPN 234
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 33/107 (30%), Positives = 55/107 (51%), Gaps = 1/107 (0%)
Query: 142 IAALLDMNAKCGNMDRALKLFKEMPKRDLVSYCSMIQGLSIHGCGEDAVRLFNSMLMEGL 201
+++L+ M KC +D A KLF M RD++ + +MI G S G + A +F M EG+
Sbjct: 1 MSSLVHMYLKCNRIDDAQKLFDGMCDRDVIVWSAMIAGYSRLGNVDRAKEVFCEMRKEGV 60
Query: 202 VPDEVAFTIILTACSHSGLVDEGWNYFQSMKQKYGISPSPDHFACMV 248
P+ V++ ++ + GL DE F M + G P +C++
Sbjct: 61 EPNLVSWNGMIAGFGNVGLYDEAVRLFHEMVSE-GFLPDGSTVSCVL 106
>Medtr3g105370.3 | pentatricopeptide (PPR) repeat protein | HC |
chr3:48574897-48578894 | 20130731
Length = 993
Score = 251 bits (641), Expect = 8e-67, Method: Compositional matrix adjust.
Identities = 136/380 (35%), Positives = 211/380 (55%), Gaps = 41/380 (10%)
Query: 5 NVASWNAMLCGFVKDGDLSSARGVFDAMPEK----------------------------- 35
++ASWNAM+ GF + A +F M E+
Sbjct: 464 DLASWNAMMHGFTVSDNYREALRLFSLMHERGEKADQITFANAAKAAGCLVRLQQGKQIH 523
Query: 36 ----------NVVSFTTMIDGYAKAGDMAAARFLFEQATEKDVVAWSALISGYVQNGQPN 85
++ + ++D Y K G+M +AR +F Q D VAW+ +ISG V+NG+
Sbjct: 524 AVVIKMRFHYDLFVISGILDMYLKCGEMKSARKVFNQIPSPDDVAWTTVISGCVENGEEE 583
Query: 86 QALKVFLEMESKNVKPDEFILVSLMSATSQLGHLELAQWVDSYVSKSSIDLQQDHVIAAL 145
QAL + +M V+PDE+ +L+ A S L LE + + + + K + V+ +L
Sbjct: 584 QALFTYHQMRLAGVQPDEYTFATLVKACSLLTALEQGKQIHANIMKLNCAFDP-FVMTSL 642
Query: 146 LDMNAKCGNMDRALKLFKEMPKRDLVSYCSMIQGLSIHGCGEDAVRLFNSMLMEGLVPDE 205
+DM AKCGN++ A LF+ M R + + +MI GL+ HG E+A+ FN M G+ PD
Sbjct: 643 VDMYAKCGNIEDAYGLFRRMNTRSVALWNAMIVGLAQHGNAEEALNFFNEMKSRGVTPDR 702
Query: 206 VAFTIILTACSHSGLVDEGWNYFQSMKQKYGISPSPDHFACMVDLLSRSGHLGDAYELMK 265
V F +L+ACSHSGL + + F SM++ YG+ P +H++C+VD LSR+GH+ +A +++
Sbjct: 703 VTFIGVLSACSHSGLTSDAYKNFDSMQKTYGVEPEIEHYSCLVDALSRAGHIQEAEKVVS 762
Query: 266 SM-HEPHAGAWGALLGACKLHGDSDLGEIVANQLFELEPQNAANYILLSNIYAAAERWID 324
SM E A + LL AC++ GD + GE VA +LF ++P ++A Y+LLSNIYAAA +W +
Sbjct: 763 SMPFEASATMYRTLLNACRVQGDKETGERVAEKLFTMDPSDSAAYVLLSNIYAAANQWEN 822
Query: 325 VSLVRSRMRERSVQKIPGCS 344
R+ M+ +V+K PG S
Sbjct: 823 AVSARNMMKRVNVKKEPGFS 842
Score = 118 bits (296), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 69/249 (27%), Positives = 124/249 (49%), Gaps = 2/249 (0%)
Query: 41 TTMIDGYAKAGDMAAARFLFEQATEKDVVAWSALISGYVQNGQPNQALKVFLEMESKNVK 100
T +ID Y+K G M A LF D+ +W+A++ G+ + +AL++F M + K
Sbjct: 438 TALIDVYSKGGKMEEAELLFHNQDGFDLASWNAMMHGFTVSDNYREALRLFSLMHERGEK 497
Query: 101 PDEFILVSLMSATSQLGHLELAQWVDSYVSKSSIDLQQDHVIAALLDMNAKCGNMDRALK 160
D+ + A L L+ + + + V K VI+ +LDM KCG M A K
Sbjct: 498 ADQITFANAAKAAGCLVRLQQGKQIHAVVIKMRFHYDL-FVISGILDMYLKCGEMKSARK 556
Query: 161 LFKEMPKRDLVSYCSMIQGLSIHGCGEDAVRLFNSMLMEGLVPDEVAFTIILTACSHSGL 220
+F ++P D V++ ++I G +G E A+ ++ M + G+ PDE F ++ ACS
Sbjct: 557 VFNQIPSPDDVAWTTVISGCVENGEEEQALFTYHQMRLAGVQPDEYTFATLVKACSLLTA 616
Query: 221 VDEGWNYFQSMKQKYGISPSPDHFACMVDLLSRSGHLGDAYELMKSMHEPHAGAWGALLG 280
+++G ++ K + P +VD+ ++ G++ DAY L + M+ W A++
Sbjct: 617 LEQGKQIHANI-MKLNCAFDPFVMTSLVDMYAKCGNIEDAYGLFRRMNTRSVALWNAMIV 675
Query: 281 ACKLHGDSD 289
HG+++
Sbjct: 676 GLAQHGNAE 684
Score = 108 bits (269), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 80/294 (27%), Positives = 138/294 (46%), Gaps = 19/294 (6%)
Query: 1 MPQRNVASWNAMLCGFVKDGDLSSARGVFDAMPEK----NVVSFTTMIDGYAKAGDM--- 53
MP R+V WN M+ +V+ G G+F A + VS T++ G K
Sbjct: 183 MPVRDVVLWNVMMKAYVEMGAGDEVLGLFSAFHRSGLRPDCVSVRTILMGVGKKTVFERE 242
Query: 54 -----AAARFLFEQATEKDVVAWSALISGYVQNGQPNQALKVFLEMESKNVKPDEFILVS 108
A A LF + DV W+ +S Y+Q G+ +A+ F +M V D +
Sbjct: 243 LEQVRAYATKLFVCDDDSDVTVWNKTLSSYLQAGEGWEAVDCFRDMIKSRVPCDSLTYIV 302
Query: 109 LMSATSQLGHLELAQWVDSYVSKSSIDLQQDHVIAALLDMNAKCGNMDRALKLFKEMPKR 168
++S + L HLEL + + V + D Q V + ++M K G+++ A ++F +M +
Sbjct: 303 ILSVVASLNHLELGKQIHGAVVRFGWD-QFVSVANSAINMYVKAGSVNYARRMFGQMKEV 361
Query: 169 DLVSYCSMIQGLSIHGCGEDAVRLFNSMLMEGLVPDEVAFTIILTACSHSGLVDEGW--- 225
DL+S+ ++I G + G E ++RLF +L GL+PD+ T +L ACS ++E +
Sbjct: 362 DLISWNTVISGCARSGLEECSLRLFIDLLRSGLLPDQFTITSVLRACSS---LEESYCVG 418
Query: 226 NYFQSMKQKYGISPSPDHFACMVDLLSRSGHLGDAYELMKSMHEPHAGAWGALL 279
+ K GI ++D+ S+ G + +A L + +W A++
Sbjct: 419 RQVHTCALKAGIVLDSFVSTALIDVYSKGGKMEEAELLFHNQDGFDLASWNAMM 472
Score = 89.7 bits (221), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 68/262 (25%), Positives = 125/262 (47%), Gaps = 15/262 (5%)
Query: 44 IDGYAKAGDMAAARFLFEQATEKDVVAWSALISGYVQNGQPNQALKVFLEMESKNVKPDE 103
I+ Y KAG + AR +F Q E D+++W+ +ISG ++G +L++F+++ + PD+
Sbjct: 339 INMYVKAGSVNYARRMFGQMKEVDLISWNTVISGCARSGLEECSLRLFIDLLRSGLLPDQ 398
Query: 104 FILVSLMSATSQLGH-LELAQWVDSYVSKSSIDLQQDHVIAALLDMNAKCGNMDRALKLF 162
F + S++ A S L + + V + K+ I L V AL+D+ +K G M+ A LF
Sbjct: 399 FTITSVLRACSSLEESYCVGRQVHTCALKAGIVLDS-FVSTALIDVYSKGGKMEEAELLF 457
Query: 163 KEMPKRDLVSYCSMIQGLSIHGCGEDAVRLFNSMLMEGLVPDEVAFTIILTACSHSGLVD 222
DL S+ +M+ G ++ +A+RLF+ M G D++ F A +G +
Sbjct: 458 HNQDGFDLASWNAMMHGFTVSDNYREALRLFSLMHERGEKADQITFA---NAAKAAGCLV 514
Query: 223 EGWNYFQSMKQKYGISPSPD-HFACMV-----DLLSRSGHLGDAYELMKSMHEPHAGAWG 276
Q KQ + + H+ V D+ + G + A ++ + P AW
Sbjct: 515 R----LQQGKQIHAVVIKMRFHYDLFVISGILDMYLKCGEMKSARKVFNQIPSPDDVAWT 570
Query: 277 ALLGACKLHGDSDLGEIVANQL 298
++ C +G+ + +Q+
Sbjct: 571 TVISGCVENGEEEQALFTYHQM 592
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 58/226 (25%), Positives = 104/226 (46%), Gaps = 19/226 (8%)
Query: 2 PQRNVASWNAMLCGFVKDGDLSSARGVFDAM------PEKNVVSFTTMIDGYAKAGDMAA 55
P + W ++L + D DL + + P++ V + +I YAK G + +
Sbjct: 9 PSSLLPQWFSILRHAIADSDLILGKRTHAVIVTSGLNPDRYVTN--NLITMYAKCGSLFS 66
Query: 56 ARFLFE--QATEKDVVAWSALISGYVQNGQ------PNQALKVFLEMESKNVKPDEFILV 107
AR LF+ +++D+V ++A+++ Y G+ ++A +F + + L
Sbjct: 67 ARKLFDITPQSDRDLVTYNAILAAYAHTGELHDVEKTHEAFHIFRLLRQSVMLTTRHTLS 126
Query: 108 SLMSATSQLGHLELAQWVDSYVSKSSIDLQQDHVIA-ALLDMNAKCGNMDRALKLFKEMP 166
L G ++ + Y K I LQ D +A AL+++ AK + A LF MP
Sbjct: 127 PLFKLCLLYGSPSASEALQGYAVK--IGLQWDVFVAGALVNIYAKFQRIREARVLFDRMP 184
Query: 167 KRDLVSYCSMIQGLSIHGCGEDAVRLFNSMLMEGLVPDEVAFTIIL 212
RD+V + M++ G G++ + LF++ GL PD V+ IL
Sbjct: 185 VRDVVLWNVMMKAYVEMGAGDEVLGLFSAFHRSGLRPDCVSVRTIL 230
>Medtr3g105370.2 | pentatricopeptide (PPR) repeat protein | HC |
chr3:48574897-48577818 | 20130731
Length = 973
Score = 251 bits (641), Expect = 8e-67, Method: Compositional matrix adjust.
Identities = 136/380 (35%), Positives = 211/380 (55%), Gaps = 41/380 (10%)
Query: 5 NVASWNAMLCGFVKDGDLSSARGVFDAMPEK----------------------------- 35
++ASWNAM+ GF + A +F M E+
Sbjct: 464 DLASWNAMMHGFTVSDNYREALRLFSLMHERGEKADQITFANAAKAAGCLVRLQQGKQIH 523
Query: 36 ----------NVVSFTTMIDGYAKAGDMAAARFLFEQATEKDVVAWSALISGYVQNGQPN 85
++ + ++D Y K G+M +AR +F Q D VAW+ +ISG V+NG+
Sbjct: 524 AVVIKMRFHYDLFVISGILDMYLKCGEMKSARKVFNQIPSPDDVAWTTVISGCVENGEEE 583
Query: 86 QALKVFLEMESKNVKPDEFILVSLMSATSQLGHLELAQWVDSYVSKSSIDLQQDHVIAAL 145
QAL + +M V+PDE+ +L+ A S L LE + + + + K + V+ +L
Sbjct: 584 QALFTYHQMRLAGVQPDEYTFATLVKACSLLTALEQGKQIHANIMKLNCAFDP-FVMTSL 642
Query: 146 LDMNAKCGNMDRALKLFKEMPKRDLVSYCSMIQGLSIHGCGEDAVRLFNSMLMEGLVPDE 205
+DM AKCGN++ A LF+ M R + + +MI GL+ HG E+A+ FN M G+ PD
Sbjct: 643 VDMYAKCGNIEDAYGLFRRMNTRSVALWNAMIVGLAQHGNAEEALNFFNEMKSRGVTPDR 702
Query: 206 VAFTIILTACSHSGLVDEGWNYFQSMKQKYGISPSPDHFACMVDLLSRSGHLGDAYELMK 265
V F +L+ACSHSGL + + F SM++ YG+ P +H++C+VD LSR+GH+ +A +++
Sbjct: 703 VTFIGVLSACSHSGLTSDAYKNFDSMQKTYGVEPEIEHYSCLVDALSRAGHIQEAEKVVS 762
Query: 266 SM-HEPHAGAWGALLGACKLHGDSDLGEIVANQLFELEPQNAANYILLSNIYAAAERWID 324
SM E A + LL AC++ GD + GE VA +LF ++P ++A Y+LLSNIYAAA +W +
Sbjct: 763 SMPFEASATMYRTLLNACRVQGDKETGERVAEKLFTMDPSDSAAYVLLSNIYAAANQWEN 822
Query: 325 VSLVRSRMRERSVQKIPGCS 344
R+ M+ +V+K PG S
Sbjct: 823 AVSARNMMKRVNVKKEPGFS 842
Score = 118 bits (296), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 69/249 (27%), Positives = 124/249 (49%), Gaps = 2/249 (0%)
Query: 41 TTMIDGYAKAGDMAAARFLFEQATEKDVVAWSALISGYVQNGQPNQALKVFLEMESKNVK 100
T +ID Y+K G M A LF D+ +W+A++ G+ + +AL++F M + K
Sbjct: 438 TALIDVYSKGGKMEEAELLFHNQDGFDLASWNAMMHGFTVSDNYREALRLFSLMHERGEK 497
Query: 101 PDEFILVSLMSATSQLGHLELAQWVDSYVSKSSIDLQQDHVIAALLDMNAKCGNMDRALK 160
D+ + A L L+ + + + V K VI+ +LDM KCG M A K
Sbjct: 498 ADQITFANAAKAAGCLVRLQQGKQIHAVVIKMRFHYDL-FVISGILDMYLKCGEMKSARK 556
Query: 161 LFKEMPKRDLVSYCSMIQGLSIHGCGEDAVRLFNSMLMEGLVPDEVAFTIILTACSHSGL 220
+F ++P D V++ ++I G +G E A+ ++ M + G+ PDE F ++ ACS
Sbjct: 557 VFNQIPSPDDVAWTTVISGCVENGEEEQALFTYHQMRLAGVQPDEYTFATLVKACSLLTA 616
Query: 221 VDEGWNYFQSMKQKYGISPSPDHFACMVDLLSRSGHLGDAYELMKSMHEPHAGAWGALLG 280
+++G ++ K + P +VD+ ++ G++ DAY L + M+ W A++
Sbjct: 617 LEQGKQIHANI-MKLNCAFDPFVMTSLVDMYAKCGNIEDAYGLFRRMNTRSVALWNAMIV 675
Query: 281 ACKLHGDSD 289
HG+++
Sbjct: 676 GLAQHGNAE 684
Score = 108 bits (269), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 80/294 (27%), Positives = 138/294 (46%), Gaps = 19/294 (6%)
Query: 1 MPQRNVASWNAMLCGFVKDGDLSSARGVFDAMPEK----NVVSFTTMIDGYAKAGDM--- 53
MP R+V WN M+ +V+ G G+F A + VS T++ G K
Sbjct: 183 MPVRDVVLWNVMMKAYVEMGAGDEVLGLFSAFHRSGLRPDCVSVRTILMGVGKKTVFERE 242
Query: 54 -----AAARFLFEQATEKDVVAWSALISGYVQNGQPNQALKVFLEMESKNVKPDEFILVS 108
A A LF + DV W+ +S Y+Q G+ +A+ F +M V D +
Sbjct: 243 LEQVRAYATKLFVCDDDSDVTVWNKTLSSYLQAGEGWEAVDCFRDMIKSRVPCDSLTYIV 302
Query: 109 LMSATSQLGHLELAQWVDSYVSKSSIDLQQDHVIAALLDMNAKCGNMDRALKLFKEMPKR 168
++S + L HLEL + + V + D Q V + ++M K G+++ A ++F +M +
Sbjct: 303 ILSVVASLNHLELGKQIHGAVVRFGWD-QFVSVANSAINMYVKAGSVNYARRMFGQMKEV 361
Query: 169 DLVSYCSMIQGLSIHGCGEDAVRLFNSMLMEGLVPDEVAFTIILTACSHSGLVDEGW--- 225
DL+S+ ++I G + G E ++RLF +L GL+PD+ T +L ACS ++E +
Sbjct: 362 DLISWNTVISGCARSGLEECSLRLFIDLLRSGLLPDQFTITSVLRACSS---LEESYCVG 418
Query: 226 NYFQSMKQKYGISPSPDHFACMVDLLSRSGHLGDAYELMKSMHEPHAGAWGALL 279
+ K GI ++D+ S+ G + +A L + +W A++
Sbjct: 419 RQVHTCALKAGIVLDSFVSTALIDVYSKGGKMEEAELLFHNQDGFDLASWNAMM 472
Score = 89.7 bits (221), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 68/262 (25%), Positives = 125/262 (47%), Gaps = 15/262 (5%)
Query: 44 IDGYAKAGDMAAARFLFEQATEKDVVAWSALISGYVQNGQPNQALKVFLEMESKNVKPDE 103
I+ Y KAG + AR +F Q E D+++W+ +ISG ++G +L++F+++ + PD+
Sbjct: 339 INMYVKAGSVNYARRMFGQMKEVDLISWNTVISGCARSGLEECSLRLFIDLLRSGLLPDQ 398
Query: 104 FILVSLMSATSQLGH-LELAQWVDSYVSKSSIDLQQDHVIAALLDMNAKCGNMDRALKLF 162
F + S++ A S L + + V + K+ I L V AL+D+ +K G M+ A LF
Sbjct: 399 FTITSVLRACSSLEESYCVGRQVHTCALKAGIVLDS-FVSTALIDVYSKGGKMEEAELLF 457
Query: 163 KEMPKRDLVSYCSMIQGLSIHGCGEDAVRLFNSMLMEGLVPDEVAFTIILTACSHSGLVD 222
DL S+ +M+ G ++ +A+RLF+ M G D++ F A +G +
Sbjct: 458 HNQDGFDLASWNAMMHGFTVSDNYREALRLFSLMHERGEKADQITFA---NAAKAAGCLV 514
Query: 223 EGWNYFQSMKQKYGISPSPD-HFACMV-----DLLSRSGHLGDAYELMKSMHEPHAGAWG 276
Q KQ + + H+ V D+ + G + A ++ + P AW
Sbjct: 515 R----LQQGKQIHAVVIKMRFHYDLFVISGILDMYLKCGEMKSARKVFNQIPSPDDVAWT 570
Query: 277 ALLGACKLHGDSDLGEIVANQL 298
++ C +G+ + +Q+
Sbjct: 571 TVISGCVENGEEEQALFTYHQM 592
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 58/226 (25%), Positives = 104/226 (46%), Gaps = 19/226 (8%)
Query: 2 PQRNVASWNAMLCGFVKDGDLSSARGVFDAM------PEKNVVSFTTMIDGYAKAGDMAA 55
P + W ++L + D DL + + P++ V + +I YAK G + +
Sbjct: 9 PSSLLPQWFSILRHAIADSDLILGKRTHAVIVTSGLNPDRYVTN--NLITMYAKCGSLFS 66
Query: 56 ARFLFEQA--TEKDVVAWSALISGYVQNGQ------PNQALKVFLEMESKNVKPDEFILV 107
AR LF+ +++D+V ++A+++ Y G+ ++A +F + + L
Sbjct: 67 ARKLFDITPQSDRDLVTYNAILAAYAHTGELHDVEKTHEAFHIFRLLRQSVMLTTRHTLS 126
Query: 108 SLMSATSQLGHLELAQWVDSYVSKSSIDLQQDHVIA-ALLDMNAKCGNMDRALKLFKEMP 166
L G ++ + Y K I LQ D +A AL+++ AK + A LF MP
Sbjct: 127 PLFKLCLLYGSPSASEALQGYAVK--IGLQWDVFVAGALVNIYAKFQRIREARVLFDRMP 184
Query: 167 KRDLVSYCSMIQGLSIHGCGEDAVRLFNSMLMEGLVPDEVAFTIIL 212
RD+V + M++ G G++ + LF++ GL PD V+ IL
Sbjct: 185 VRDVVLWNVMMKAYVEMGAGDEVLGLFSAFHRSGLRPDCVSVRTIL 230
>Medtr3g105370.1 | pentatricopeptide (PPR) repeat protein | HC |
chr3:48574897-48577818 | 20130731
Length = 973
Score = 251 bits (641), Expect = 8e-67, Method: Compositional matrix adjust.
Identities = 136/380 (35%), Positives = 211/380 (55%), Gaps = 41/380 (10%)
Query: 5 NVASWNAMLCGFVKDGDLSSARGVFDAMPEK----------------------------- 35
++ASWNAM+ GF + A +F M E+
Sbjct: 464 DLASWNAMMHGFTVSDNYREALRLFSLMHERGEKADQITFANAAKAAGCLVRLQQGKQIH 523
Query: 36 ----------NVVSFTTMIDGYAKAGDMAAARFLFEQATEKDVVAWSALISGYVQNGQPN 85
++ + ++D Y K G+M +AR +F Q D VAW+ +ISG V+NG+
Sbjct: 524 AVVIKMRFHYDLFVISGILDMYLKCGEMKSARKVFNQIPSPDDVAWTTVISGCVENGEEE 583
Query: 86 QALKVFLEMESKNVKPDEFILVSLMSATSQLGHLELAQWVDSYVSKSSIDLQQDHVIAAL 145
QAL + +M V+PDE+ +L+ A S L LE + + + + K + V+ +L
Sbjct: 584 QALFTYHQMRLAGVQPDEYTFATLVKACSLLTALEQGKQIHANIMKLNCAFDP-FVMTSL 642
Query: 146 LDMNAKCGNMDRALKLFKEMPKRDLVSYCSMIQGLSIHGCGEDAVRLFNSMLMEGLVPDE 205
+DM AKCGN++ A LF+ M R + + +MI GL+ HG E+A+ FN M G+ PD
Sbjct: 643 VDMYAKCGNIEDAYGLFRRMNTRSVALWNAMIVGLAQHGNAEEALNFFNEMKSRGVTPDR 702
Query: 206 VAFTIILTACSHSGLVDEGWNYFQSMKQKYGISPSPDHFACMVDLLSRSGHLGDAYELMK 265
V F +L+ACSHSGL + + F SM++ YG+ P +H++C+VD LSR+GH+ +A +++
Sbjct: 703 VTFIGVLSACSHSGLTSDAYKNFDSMQKTYGVEPEIEHYSCLVDALSRAGHIQEAEKVVS 762
Query: 266 SM-HEPHAGAWGALLGACKLHGDSDLGEIVANQLFELEPQNAANYILLSNIYAAAERWID 324
SM E A + LL AC++ GD + GE VA +LF ++P ++A Y+LLSNIYAAA +W +
Sbjct: 763 SMPFEASATMYRTLLNACRVQGDKETGERVAEKLFTMDPSDSAAYVLLSNIYAAANQWEN 822
Query: 325 VSLVRSRMRERSVQKIPGCS 344
R+ M+ +V+K PG S
Sbjct: 823 AVSARNMMKRVNVKKEPGFS 842
Score = 118 bits (296), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 69/249 (27%), Positives = 124/249 (49%), Gaps = 2/249 (0%)
Query: 41 TTMIDGYAKAGDMAAARFLFEQATEKDVVAWSALISGYVQNGQPNQALKVFLEMESKNVK 100
T +ID Y+K G M A LF D+ +W+A++ G+ + +AL++F M + K
Sbjct: 438 TALIDVYSKGGKMEEAELLFHNQDGFDLASWNAMMHGFTVSDNYREALRLFSLMHERGEK 497
Query: 101 PDEFILVSLMSATSQLGHLELAQWVDSYVSKSSIDLQQDHVIAALLDMNAKCGNMDRALK 160
D+ + A L L+ + + + V K VI+ +LDM KCG M A K
Sbjct: 498 ADQITFANAAKAAGCLVRLQQGKQIHAVVIKMRFHYDL-FVISGILDMYLKCGEMKSARK 556
Query: 161 LFKEMPKRDLVSYCSMIQGLSIHGCGEDAVRLFNSMLMEGLVPDEVAFTIILTACSHSGL 220
+F ++P D V++ ++I G +G E A+ ++ M + G+ PDE F ++ ACS
Sbjct: 557 VFNQIPSPDDVAWTTVISGCVENGEEEQALFTYHQMRLAGVQPDEYTFATLVKACSLLTA 616
Query: 221 VDEGWNYFQSMKQKYGISPSPDHFACMVDLLSRSGHLGDAYELMKSMHEPHAGAWGALLG 280
+++G ++ K + P +VD+ ++ G++ DAY L + M+ W A++
Sbjct: 617 LEQGKQIHANI-MKLNCAFDPFVMTSLVDMYAKCGNIEDAYGLFRRMNTRSVALWNAMIV 675
Query: 281 ACKLHGDSD 289
HG+++
Sbjct: 676 GLAQHGNAE 684
Score = 108 bits (269), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 80/294 (27%), Positives = 138/294 (46%), Gaps = 19/294 (6%)
Query: 1 MPQRNVASWNAMLCGFVKDGDLSSARGVFDAMPEK----NVVSFTTMIDGYAKAGDM--- 53
MP R+V WN M+ +V+ G G+F A + VS T++ G K
Sbjct: 183 MPVRDVVLWNVMMKAYVEMGAGDEVLGLFSAFHRSGLRPDCVSVRTILMGVGKKTVFERE 242
Query: 54 -----AAARFLFEQATEKDVVAWSALISGYVQNGQPNQALKVFLEMESKNVKPDEFILVS 108
A A LF + DV W+ +S Y+Q G+ +A+ F +M V D +
Sbjct: 243 LEQVRAYATKLFVCDDDSDVTVWNKTLSSYLQAGEGWEAVDCFRDMIKSRVPCDSLTYIV 302
Query: 109 LMSATSQLGHLELAQWVDSYVSKSSIDLQQDHVIAALLDMNAKCGNMDRALKLFKEMPKR 168
++S + L HLEL + + V + D Q V + ++M K G+++ A ++F +M +
Sbjct: 303 ILSVVASLNHLELGKQIHGAVVRFGWD-QFVSVANSAINMYVKAGSVNYARRMFGQMKEV 361
Query: 169 DLVSYCSMIQGLSIHGCGEDAVRLFNSMLMEGLVPDEVAFTIILTACSHSGLVDEGW--- 225
DL+S+ ++I G + G E ++RLF +L GL+PD+ T +L ACS ++E +
Sbjct: 362 DLISWNTVISGCARSGLEECSLRLFIDLLRSGLLPDQFTITSVLRACSS---LEESYCVG 418
Query: 226 NYFQSMKQKYGISPSPDHFACMVDLLSRSGHLGDAYELMKSMHEPHAGAWGALL 279
+ K GI ++D+ S+ G + +A L + +W A++
Sbjct: 419 RQVHTCALKAGIVLDSFVSTALIDVYSKGGKMEEAELLFHNQDGFDLASWNAMM 472
Score = 89.7 bits (221), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 68/262 (25%), Positives = 125/262 (47%), Gaps = 15/262 (5%)
Query: 44 IDGYAKAGDMAAARFLFEQATEKDVVAWSALISGYVQNGQPNQALKVFLEMESKNVKPDE 103
I+ Y KAG + AR +F Q E D+++W+ +ISG ++G +L++F+++ + PD+
Sbjct: 339 INMYVKAGSVNYARRMFGQMKEVDLISWNTVISGCARSGLEECSLRLFIDLLRSGLLPDQ 398
Query: 104 FILVSLMSATSQLGH-LELAQWVDSYVSKSSIDLQQDHVIAALLDMNAKCGNMDRALKLF 162
F + S++ A S L + + V + K+ I L V AL+D+ +K G M+ A LF
Sbjct: 399 FTITSVLRACSSLEESYCVGRQVHTCALKAGIVLDS-FVSTALIDVYSKGGKMEEAELLF 457
Query: 163 KEMPKRDLVSYCSMIQGLSIHGCGEDAVRLFNSMLMEGLVPDEVAFTIILTACSHSGLVD 222
DL S+ +M+ G ++ +A+RLF+ M G D++ F A +G +
Sbjct: 458 HNQDGFDLASWNAMMHGFTVSDNYREALRLFSLMHERGEKADQITFA---NAAKAAGCLV 514
Query: 223 EGWNYFQSMKQKYGISPSPD-HFACMV-----DLLSRSGHLGDAYELMKSMHEPHAGAWG 276
Q KQ + + H+ V D+ + G + A ++ + P AW
Sbjct: 515 R----LQQGKQIHAVVIKMRFHYDLFVISGILDMYLKCGEMKSARKVFNQIPSPDDVAWT 570
Query: 277 ALLGACKLHGDSDLGEIVANQL 298
++ C +G+ + +Q+
Sbjct: 571 TVISGCVENGEEEQALFTYHQM 592
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 58/226 (25%), Positives = 104/226 (46%), Gaps = 19/226 (8%)
Query: 2 PQRNVASWNAMLCGFVKDGDLSSARGVFDAM------PEKNVVSFTTMIDGYAKAGDMAA 55
P + W ++L + D DL + + P++ V + +I YAK G + +
Sbjct: 9 PSSLLPQWFSILRHAIADSDLILGKRTHAVIVTSGLNPDRYVTN--NLITMYAKCGSLFS 66
Query: 56 ARFLFEQA--TEKDVVAWSALISGYVQNGQ------PNQALKVFLEMESKNVKPDEFILV 107
AR LF+ +++D+V ++A+++ Y G+ ++A +F + + L
Sbjct: 67 ARKLFDITPQSDRDLVTYNAILAAYAHTGELHDVEKTHEAFHIFRLLRQSVMLTTRHTLS 126
Query: 108 SLMSATSQLGHLELAQWVDSYVSKSSIDLQQDHVIA-ALLDMNAKCGNMDRALKLFKEMP 166
L G ++ + Y K I LQ D +A AL+++ AK + A LF MP
Sbjct: 127 PLFKLCLLYGSPSASEALQGYAVK--IGLQWDVFVAGALVNIYAKFQRIREARVLFDRMP 184
Query: 167 KRDLVSYCSMIQGLSIHGCGEDAVRLFNSMLMEGLVPDEVAFTIIL 212
RD+V + M++ G G++ + LF++ GL PD V+ IL
Sbjct: 185 VRDVVLWNVMMKAYVEMGAGDEVLGLFSAFHRSGLRPDCVSVRTIL 230
>Medtr3g084440.1 | pentatricopeptide (PPR) repeat protein | HC |
chr3:38114703-38117150 | 20130731
Length = 616
Score = 250 bits (639), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 135/324 (41%), Positives = 206/324 (63%), Gaps = 9/324 (2%)
Query: 26 RGVFDAMPEKNVVSFTTMIDGYAKAGDMAAARFLFEQATEKDVVAWSALISGYVQNGQPN 85
R VFD++ E + +S+T MI GYA++G A LF ++ K++ AW+ALISG VQ+G N
Sbjct: 166 RAVFDSIFELSSISWTAMISGYARSGRKLEALELFRESPFKNLYAWTALISGLVQSGNAN 225
Query: 86 QALKVFLEMESKNVK-PDEFILVSLMSATSQLGHLELAQWVDSYVSKSSIDLQQDHVI-- 142
AL +F+EM + V D +L S++ A + EL + V V I L + +
Sbjct: 226 DALYLFVEMRREGVSIADPLVLSSVVGACANSAVRELGKQVHCVV----ITLGYESCLFI 281
Query: 143 -AALLDMNAKCGNMDRALKLFKEMPKRDLVSYCSMIQGLSIHGCGEDAVRLFNSMLMEGL 201
AL+DM AKC ++ A +F EM ++D+VS+ S+I G + HG E+A+ L++ M++ G+
Sbjct: 282 SNALVDMYAKCSDVVAAKYIFCEMRRKDVVSWTSIIVGTAQHGLAEEALTLYDDMVLAGV 341
Query: 202 VPDEVAFTIILTACSHSGLVDEGWNYFQSMKQKYGISPSPDHFACMVDLLSRSGHLGDAY 261
P+EV F ++ ACSH GLV +G F+SM + +GI PS H+ C++DL SRSGHL +A
Sbjct: 342 KPNEVTFVGLIYACSHVGLVSKGRALFKSMVEDFGIRPSLQHYTCLLDLFSRSGHLDEAE 401
Query: 262 ELMKSMH-EPHAGAWGALLGACKLHGDSDLGEIVANQLFELEPQNAANYILLSNIYAAAE 320
L+++M +P W ALL ACK HG++ + +A+ L +L+P++ ++YILLSNIYA A
Sbjct: 402 NLIRTMPVKPDEPTWAALLSACKHHGNTKMAVRIADHLLDLKPEDPSSYILLSNIYAGAG 461
Query: 321 RWIDVSLVRSRMRERSVQKIPGCS 344
W +VS+VR M + V+K+PG S
Sbjct: 462 MWENVSMVRKLMAVKEVKKVPGYS 485
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 69/285 (24%), Positives = 131/285 (45%), Gaps = 48/285 (16%)
Query: 42 TMIDGYAKAGDMAAARFLFEQATEKDVVAWSALISGYVQNGQPNQALKVFLEMESKNVKP 101
T+ID Y K G + A LF+ ++D VAW+ ++S + P++A + L + + ++P
Sbjct: 48 TLIDAYGKCGLLKDALKLFDALPQQDHVAWATVLSACNLSNLPHKAFSISLPILHEGLQP 107
Query: 102 DEFILVSLMSATSQLG--HLELAQWVDSYVSKSSIDLQQDHVIAALLDMNAK-------- 151
D F+ SL+ A + LG H++L + + + S + D V ++L+DM AK
Sbjct: 108 DHFVFSSLIKACANLGSVHVKLGKQLHARFLLSPF-FEDDVVKSSLVDMYAKFELPDYGR 166
Query: 152 -----------------------CGNMDRALKLFKEMPKRDLVSYCSMIQGLSIHGCGED 188
G AL+LF+E P ++L ++ ++I GL G D
Sbjct: 167 AVFDSIFELSSISWTAMISGYARSGRKLEALELFRESPFKNLYAWTALISGLVQSGNAND 226
Query: 189 AVRLFNSMLMEGL-VPDEVAFTIILTACSHSGLVDEGWNYFQSMKQKYGISPSPDHFAC- 246
A+ LF M EG+ + D + + ++ AC++S + + G KQ + + + + +C
Sbjct: 227 ALYLFVEMRREGVSIADPLVLSSVVGACANSAVRELG-------KQVHCVVITLGYESCL 279
Query: 247 -----MVDLLSRSGHLGDAYELMKSMHEPHAGAWGALLGACKLHG 286
+VD+ ++ + A + M +W +++ HG
Sbjct: 280 FISNALVDMYAKCSDVVAAKYIFCEMRRKDVVSWTSIIVGTAQHG 324
>Medtr7g109860.1 | pentatricopeptide (PPR) repeat protein | HC |
chr7:45010556-45008657 | 20130731
Length = 512
Score = 250 bits (638), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 130/346 (37%), Positives = 208/346 (60%), Gaps = 5/346 (1%)
Query: 1 MPQRNVASWNAMLCGFVKDGDLSSARGVFDAMPEKNVVSFTTMIDGYAKAGDMAAARFLF 60
+ ++V SWNA++ +++ G A+ FD MP++N++S+TT+++GY K + AR +F
Sbjct: 167 ISMKDVTSWNALVSSYMELGKFVDAQTAFDQMPQRNIISWTTLVNGYVKNKQVNKARSVF 226
Query: 61 EQATEKDVVAWSALISGYVQNGQPNQALKVFLEMESKNVKPDEFILVSLMSATSQLGHLE 120
+ +E++VV+W+A+ISGYVQN + ALK+F+ M +P+ F S++ A + L
Sbjct: 227 DDMSERNVVSWTAMISGYVQNKRFVDALKLFVLMFKTETRPNHFTFSSVLDACAGSSSLI 286
Query: 121 LAQWVDSYVSKSSIDLQQDHV-IAALLDMNAKCGNMDRALKLFKEMPKRDLVSYCSMIQG 179
+ + + KS I D + + +L+DM AKCG+MD A +F+ + ++LVS+ ++I G
Sbjct: 287 MGLQLHPCIIKSGI--ANDVIWLTSLVDMYAKCGDMDAAFGVFESIRDKNLVSWNAIIGG 344
Query: 180 LSIHGCGEDAVRLFNSMLMEGLVPDEVAFTIILTACSHSGLVDEGWNYFQSMKQKYGISP 239
+ HG A+ F+ M + G PDEV F +L+AC H+GLV+EG +F M KYGI
Sbjct: 345 YASHGLATRALEEFDRMKVVG-TPDEVTFVNVLSACVHAGLVEEGEKHFTDMLTKYGIQA 403
Query: 240 SPDHFACMVDLLSRSGHLGDAYELMKSM-HEPHAGAWGALLGACKLHGDSDLGEIVANQL 298
+H++CMVDL R+G +A L+K+M EP WGALL AC LH + +LGE A ++
Sbjct: 404 EMEHYSCMVDLYGRAGRFDEAENLIKNMPFEPDVVLWGALLAACGLHSNLELGEYAAERI 463
Query: 299 FELEPQNAANYILLSNIYAAAERWIDVSLVRSRMRERSVQKIPGCS 344
LE + +Y +LS I W V+ +R M+ER ++K S
Sbjct: 464 RRLESSHPVSYSVLSKIQGEKGVWSSVNELRDTMKERGIKKQTAIS 509
Score = 79.0 bits (193), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 68/315 (21%), Positives = 144/315 (45%), Gaps = 37/315 (11%)
Query: 5 NVASWNAMLCGFVKDGDLSSARGVFDAMPEKNVVSFTTMIDGYAKAGDMAAARFLFEQ-- 62
N+ SWN ++ +++ + +FD MP K+ VS+ M+ G+ + + F Q
Sbjct: 39 NIVSWNMVMTAYLQHNQIGPVHDLFDKMPLKDAVSWNIMLSGFQRTRNSEGLYRCFLQMG 98
Query: 63 -------------------ATEKDVV-----AWSALISGYVQNGQPNQALKVFLEMESKN 98
+TE DV+ A + + Y+ + ++ + ++ +
Sbjct: 99 RAGVVPNDYTISTLLRAVISTELDVLVRQVHALAFHLGHYLNVFVGSSLIRAYAGLKEEE 158
Query: 99 VKPDEFILVSLMSATSQ----LGHLELAQWVDSYVSKSSID-LQQDHVIA--ALLDMNAK 151
F +S+ TS ++EL ++VD ++++ D + Q ++I+ L++ K
Sbjct: 159 ALGRAFNDISMKDVTSWNALVSSYMELGKFVD---AQTAFDQMPQRNIISWTTLVNGYVK 215
Query: 152 CGNMDRALKLFKEMPKRDLVSYCSMIQGLSIHGCGEDAVRLFNSMLMEGLVPDEVAFTII 211
+++A +F +M +R++VS+ +MI G + DA++LF M P+ F+ +
Sbjct: 216 NKQVNKARSVFDDMSERNVVSWTAMISGYVQNKRFVDALKLFVLMFKTETRPNHFTFSSV 275
Query: 212 LTACSHSGLVDEGWNYFQSMKQKYGISPSPDHFACMVDLLSRSGHLGDAYELMKSMHEPH 271
L AC+ S + G + K GI+ +VD+ ++ G + A+ + +S+ + +
Sbjct: 276 LDACAGSSSLIMGLQLHPCII-KSGIANDVIWLTSLVDMYAKCGDMDAAFGVFESIRDKN 334
Query: 272 AGAWGALLGACKLHG 286
+W A++G HG
Sbjct: 335 LVSWNAIIGGYASHG 349
>Medtr5g040920.1 | pentatricopeptide (PPR) repeat protein | HC |
chr5:17991225-17993175 | 20130731
Length = 586
Score = 249 bits (637), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 120/312 (38%), Positives = 194/312 (62%), Gaps = 2/312 (0%)
Query: 36 NVVSFTTMIDGYAKAGDMAAARFLFEQATEKDVVAWSALISGYVQNGQPNQALKVFLEME 95
N+ T+I+ Y GD+ A+R +F++ E VVA++A+I +N + N+AL +F E++
Sbjct: 146 NMYVVPTLINMYTACGDIDASRRVFDKIDEPCVVAYNAIIMSLARNNRANEALALFRELQ 205
Query: 96 SKNVKPDEFILVSLMSATSQLGHLELAQWVDSYVSKSSIDLQQDHVIAALLDMNAKCGNM 155
+KP + ++ ++S+ + LG L+L +W+ YV K D + V L+DM AKCG++
Sbjct: 206 EIGLKPTDVTMLVVLSSCALLGSLDLGRWMHEYVKKYGFD-RYVKVNTTLIDMYAKCGSL 264
Query: 156 DRALKLFKEMPKRDLVSYCSMIQGLSIHGCGEDAVRLFNSMLMEGLVPDEVAFTIILTAC 215
D A+ +F++MPKRD ++ ++I + HG G A+ + N M E + PDE+ F IL AC
Sbjct: 265 DDAVNVFRDMPKRDTQAWSAIIVAYATHGDGFQAISMLNEMKKEKVQPDEITFLGILYAC 324
Query: 216 SHSGLVDEGWNYFQSMKQKYGISPSPDHFACMVDLLSRSGHLGDAYELMKSMH-EPHAGA 274
SH+GLV+EG+ YF M +YGI PS H+ CMVDLL R+G L +AY+ + + +P
Sbjct: 325 SHNGLVEEGFEYFHGMTNEYGIVPSIKHYGCMVDLLGRAGRLDEAYKFIDELPIKPTPIL 384
Query: 275 WGALLGACKLHGDSDLGEIVANQLFELEPQNAANYILLSNIYAAAERWIDVSLVRSRMRE 334
W LL AC HG+ ++G+ V ++FEL+ + +Y++ SN+ A +W DV+ +R M +
Sbjct: 385 WRTLLSACSTHGNVEMGKRVIERIFELDDSHGGDYVIFSNLCARYGKWDDVNHLRKTMID 444
Query: 335 RSVQKIPGCSKL 346
+ KIPGCS +
Sbjct: 445 KGAVKIPGCSSI 456
Score = 81.6 bits (200), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 54/251 (21%), Positives = 112/251 (44%), Gaps = 17/251 (6%)
Query: 37 VVSFTTMIDGYAKAGDMAAARFLFEQATEKDVVAWSALISGYVQNGQPNQALKVFLEMES 96
+ F M A LF+Q T+ ++V ++ + GY + P + + F
Sbjct: 61 ITKFINFCTSNPTKASMEHAHQLFDQITQPNIVLFNTMARGYARLNDPLRMITHFRR--- 117
Query: 97 KNVKPDEFILVSLMSATSQLGHLELAQWVDSYVSKSSIDLQQDHVIAALLDMNAKCGNMD 156
+ S++ L + + + K + +V+ L++M CG++D
Sbjct: 118 ------------CLRLVSKVKALAEGKQLHCFAVKLGVS-DNMYVVPTLINMYTACGDID 164
Query: 157 RALKLFKEMPKRDLVSYCSMIQGLSIHGCGEDAVRLFNSMLMEGLVPDEVAFTIILTACS 216
+ ++F ++ + +V+Y ++I L+ + +A+ LF + GL P +V ++L++C+
Sbjct: 165 ASRRVFDKIDEPCVVAYNAIIMSLARNNRANEALALFRELQEIGLKPTDVTMLVVLSSCA 224
Query: 217 HSGLVDEGWNYFQSMKQKYGISPSPDHFACMVDLLSRSGHLGDAYELMKSMHEPHAGAWG 276
G +D G + +KYG ++D+ ++ G L DA + + M + AW
Sbjct: 225 LLGSLDLG-RWMHEYVKKYGFDRYVKVNTTLIDMYAKCGSLDDAVNVFRDMPKRDTQAWS 283
Query: 277 ALLGACKLHGD 287
A++ A HGD
Sbjct: 284 AIIVAYATHGD 294
>Medtr7g016960.1 | pentatricopeptide (PPR) repeat protein | HC |
chr7:5362710-5366096 | 20130731
Length = 654
Score = 249 bits (636), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 123/314 (39%), Positives = 199/314 (63%), Gaps = 4/314 (1%)
Query: 34 EKNVVSFTTMIDGYAKAGDMAAARFLFEQATEKDVVAWSALISGYVQNGQPNQALKVF-- 91
E +V TT++D YA+ G ++ A +F +K++V+WSA+I+ Y +N P +AL++F
Sbjct: 211 EGHVHVMTTLLDVYARFGYVSYASSVFGAMPDKNIVSWSAMIACYAKNEMPMKALELFQI 270
Query: 92 LEMESKNVKPDEFILVSLMSATSQLGHLELAQWVDSYVSKSSIDLQQDHVIAALLDMNAK 151
+ +E+ + P+ +VS++ A + L LE + V +YV + +D V+ L+ M +
Sbjct: 271 MMLEACDTVPNPITMVSVLQACASLAALEHGKLVHAYVLRRGLD-STLPVLNTLITMYGR 329
Query: 152 CGNMDRALKLFKEMPKRDLVSYCSMIQGLSIHGCGEDAVRLFNSMLMEGLVPDEVAFTII 211
CG + ++F M KRD++S+ S+I +HG G+ A+++F +M+ G+ P + F +
Sbjct: 330 CGEISTGQRVFDYMKKRDVISWNSLISIYGMHGLGKKAIQIFENMINRGVSPSYITFITV 389
Query: 212 LTACSHSGLVDEGWNYFQSMKQKYGISPSPDHFACMVDLLSRSGHLGDAYELMKSM-HEP 270
L ACSH+GLV+E F+SM KY I P +H+ACMVD+L R+ L +A EL+++M +P
Sbjct: 390 LCACSHAGLVEEAKILFESMLNKYRIHPRMEHYACMVDILGRANRLDEAIELIQNMDFKP 449
Query: 271 HAGAWGALLGACKLHGDSDLGEIVANQLFELEPQNAANYILLSNIYAAAERWIDVSLVRS 330
WG+LLG+C++H + +L E + LFELEP+NA NY+LLS+IYA + W DV VR
Sbjct: 450 GPTVWGSLLGSCRIHCNVELAERASAMLFELEPKNAGNYVLLSHIYAKSRMWNDVRRVRK 509
Query: 331 RMRERSVQKIPGCS 344
++ R +QKIP CS
Sbjct: 510 QLESRGLQKIPSCS 523
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 51/234 (21%), Positives = 104/234 (44%), Gaps = 13/234 (5%)
Query: 74 LISGYVQNGQPNQALKVFLEMESKNVKPDEFILVSLMSATSQLGHLELAQWVDSYVSKSS 133
LI + G QA+++ + K E ++ S + S L+ VD +
Sbjct: 49 LIQSLCRGGNLKQAVQLLCCEPNPTKKTFELLINSCIEQNS------LSDGVDVHHRLVG 102
Query: 134 IDLQQDHVIAA-LLDMNAKCGNMDRALKLFKEMPKRDLVSYCSMIQGLSIHGCGEDAVRL 192
L QD +A L++M G++D A K+F E ++ + + ++ + L++ GED + L
Sbjct: 103 SGLDQDPYLATKLINMYCDLGSVDHACKVFDETREKTIFVWNAIFRALAMASRGEDLLVL 162
Query: 193 FNSMLMEGLVPDEVAFTIILTACSHSGL----VDEGWNYFQSMKQKYGISPSPDHFACMV 248
+ M G+ + +T +L AC S L + +G + ++G ++
Sbjct: 163 YGQMNWIGIPSNRFTYTYVLKACVVSELSICPLRKG-KEIHAHILRHGYEGHVHVMTTLL 221
Query: 249 DLLSRSGHLGDAYELMKSMHEPHAGAWGALLGACKLHGDSDLGEIVANQLFELE 302
D+ +R G++ A + +M + + +W A++ AC + + + Q+ LE
Sbjct: 222 DVYARFGYVSYASSVFGAMPDKNIVSWSAMI-ACYAKNEMPMKALELFQIMMLE 274
>Medtr5g008600.1 | pentatricopeptide (PPR) repeat protein | HC |
chr5:1841187-1847304 | 20130731
Length = 880
Score = 249 bits (635), Expect = 4e-66, Method: Compositional matrix adjust.
Identities = 130/385 (33%), Positives = 213/385 (55%), Gaps = 42/385 (10%)
Query: 1 MPQRNVASWNAMLCGFVKDGDLSSARGVFDAMPEK------------------------- 35
MP R+ SWNA++ G+V G A +F M E
Sbjct: 155 MPHRDNFSWNAVISGYVSQGWYMEALDLFRMMQENESSNCNMFTLSSALAAAAAISSLRR 214
Query: 36 ---------------NVVSFTTMIDGYAKAGDMAAARFLFEQATEKDVVAWSALISGYVQ 80
+ V +T ++D Y K G + AR +F+Q +KD+V+W+ +I +
Sbjct: 215 GKEIHGYLIRSGLELDEVVWTALLDLYGKCGSLNEARGIFDQMADKDIVSWTTMIHRCFE 274
Query: 81 NGQPNQALKVFLEMESKNVKPDEFILVSLMSATSQLGHLELAQWVDSYVSKSSIDLQQDH 140
+G+ + +F ++ V+P+E+ +++A + L ++ + V Y+++ D
Sbjct: 275 DGRKKEGFSLFRDLMGSGVRPNEYTFAGVLNACADLAAEQMGKEVHGYMTRVGYD-PFSF 333
Query: 141 VIAALLDMNAKCGNMDRALKLFKEMPKRDLVSYCSMIQGLSIHGCGEDAVRLFNSMLMEG 200
+AL+ + +KCGN + A ++F +MP+ DLVS+ S+I G + +G + A++ F S+L G
Sbjct: 334 AASALVHVYSKCGNTETARRVFNQMPRPDLVSWTSLIVGYAQNGQPDMALQFFESLLRSG 393
Query: 201 LVPDEVAFTIILTACSHSGLVDEGWNYFQSMKQKYGISPSPDHFACMVDLLSRSGHLGDA 260
PDE+ F +L+AC+H+GLVD G YF S+K+K+G+ + DH+AC++DLL+RSG +A
Sbjct: 394 TKPDEITFVGVLSACTHAGLVDIGLEYFHSVKEKHGLVHTADHYACVIDLLARSGRFKEA 453
Query: 261 YELMKSMH-EPHAGAWGALLGACKLHGDSDLGEIVANQLFELEPQNAANYILLSNIYAAA 319
++ +M +P W +LLG C++HG+ +L E A LFELEP+N A YI LSNIYA A
Sbjct: 454 ENIIDNMPMKPDKFLWASLLGGCRIHGNIELAERAAKALFELEPENPATYITLSNIYANA 513
Query: 320 ERWIDVSLVRSRMRERSVQKIPGCS 344
W + + VR+ M R + K PG S
Sbjct: 514 GLWTEETKVRNDMDNRGIVKKPGKS 538
Score = 127 bits (318), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 88/293 (30%), Positives = 152/293 (51%), Gaps = 9/293 (3%)
Query: 10 NAMLCGFVKDGDLSSARGVFDAMPEKNVVSFTTMIDGYAKAGDMAAARFLFEQATEKDVV 69
N ++ + K G L A+ +FD +P+K++ S+ TMI GYA G + AR LF++ +D
Sbjct: 102 NRLIHMYAKCGSLVDAQMLFDEIPQKDLCSWNTMISGYANVGRIEQARKLFDEMPHRDNF 161
Query: 70 AWSALISGYVQNGQPNQALKVFLEM-ESKNVKPDEFILVSLMSATSQLGHLELAQWVDSY 128
+W+A+ISGYV G +AL +F M E+++ + F L S ++A + + L + + Y
Sbjct: 162 SWNAVISGYVSQGWYMEALDLFRMMQENESSNCNMFTLSSALAAAAAISSLRRGKEIHGY 221
Query: 129 VSKSSIDLQQDHVI-AALLDMNAKCGNMDRALKLFKEMPKRDLVSYCSMIQGLSIHGCGE 187
+ +S ++L D V+ ALLD+ KCG+++ A +F +M +D+VS+ +MI G +
Sbjct: 222 LIRSGLEL--DEVVWTALLDLYGKCGSLNEARGIFDQMADKDIVSWTTMIHRCFEDGRKK 279
Query: 188 DAVRLFNSMLMEGLVPDEVAFTIILTACSHSGLVDEGWNYFQSMKQKYGISPSPDHFACM 247
+ LF ++ G+ P+E F +L AC+ G M + G P + +
Sbjct: 280 EGFSLFRDLMGSGVRPNEYTFAGVLNACADLAAEQMGKEVHGYM-TRVGYDPFSFAASAL 338
Query: 248 VDLLSRSGHLGDAYELMKSMHEPHAGAWGALLGACKLHGDSDLGEIVANQLFE 300
V + S+ G+ A + M P +W +L+ +G D+ A Q FE
Sbjct: 339 VHVYSKCGNTETARRVFNQMPRPDLVSWTSLIVGYAQNGQPDM----ALQFFE 387
>Medtr1g111020.2 | pentatricopeptide (PPR) repeat protein | HC |
chr1:50134416-50129873 | 20130731
Length = 860
Score = 247 bits (631), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 121/306 (39%), Positives = 200/306 (65%), Gaps = 2/306 (0%)
Query: 40 FTTMIDGYAKAGDMAAARFLFEQATEKDVVAWSALISGYVQNGQPNQALKVFLEMESKNV 99
+++D Y K + A +FE+ T +D+VA++++I+ Y Q+G +ALK++L+M+ ++
Sbjct: 425 INSLLDTYGKCSHIDEASKIFEERTWEDLVAYTSMITAYSQHGDAEEALKLYLQMQVADI 484
Query: 100 KPDEFILVSLMSATSQLGHLELAQWVDSYVSKSSIDLQQDHVIAALLDMNAKCGNMDRAL 159
KPD F+ SL++A + L E + + + K + +L++M AKCG+++ A
Sbjct: 485 KPDPFVCSSLLNACANLSAYEQGKQLHVHAIKFGF-MSDIFASNSLVNMYAKCGSIEDAD 543
Query: 160 KLFKEMPKRDLVSYCSMIQGLSIHGCGEDAVRLFNSMLMEGLVPDEVAFTIILTACSHSG 219
+ F E+P+R +VS+ +MI GL+ HG G++A+ +FN ML + + P+ + +L AC+H+G
Sbjct: 544 RAFSEIPQRGIVSWSAMIGGLAQHGHGKEALIMFNQMLKDCVSPNHITLVSVLCACNHAG 603
Query: 220 LVDEGWNYFQSMKQKYGISPSPDHFACMVDLLSRSGHLGDAYELMKSM-HEPHAGAWGAL 278
LV+EG YF++M++K+GI P+ +H ACM+DLL RSG L +A EL+ S+ E WGAL
Sbjct: 604 LVNEGKQYFETMEEKFGIKPTQEHHACMIDLLGRSGKLNEAVELVNSIPFEADGSVWGAL 663
Query: 279 LGACKLHGDSDLGEIVANQLFELEPQNAANYILLSNIYAAAERWIDVSLVRSRMRERSVQ 338
LGA ++H + +LGE A +LF LEP + +LL+NIYA+A W +V+ VR M+ +V+
Sbjct: 664 LGAARIHKNVELGEKAAERLFTLEPDKSGTLVLLANIYASAGMWENVANVRKVMQNSNVK 723
Query: 339 KIPGCS 344
K PG S
Sbjct: 724 KEPGMS 729
Score = 115 bits (287), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 78/277 (28%), Positives = 141/277 (50%), Gaps = 5/277 (1%)
Query: 43 MIDGYAKAGDMAAARFLFEQATEKD-VVAWSALISGYVQNGQPNQALKVFLEMESKNVKP 101
+ID Y+K M AR ++ KD ++A +ALISGY Q G QA+ +F E+ +N+
Sbjct: 326 LIDLYSKCEMMDDARRAYDLMPTKDHIIAGNALISGYSQCGDDEQAISLFFELHHENIDF 385
Query: 102 DEFILVSLMSATSQLGHLELAQWVDSYVSKSSIDLQQDHVIAALLDMNAKCGNMDRALKL 161
++ L +++ + + L +++ + + + K I +VI +LLD KC ++D A K+
Sbjct: 386 NQTTLSTVLKSVASLQQIKVCKQIHTLSIKCGI-YSDFYVINSLLDTYGKCSHIDEASKI 444
Query: 162 FKEMPKRDLVSYCSMIQGLSIHGCGEDAVRLFNSMLMEGLVPDEVAFTIILTACSHSGLV 221
F+E DLV+Y SMI S HG E+A++L+ M + + PD + +L AC++
Sbjct: 445 FEERTWEDLVAYTSMITAYSQHGDAEEALKLYLQMQVADIKPDPFVCSSLLNACANLSAY 504
Query: 222 DEGWNYFQSMKQKYGISPSPDHFACMVDLLSRSGHLGDAYELMKSMHEPHAGAWGALLGA 281
++G K+G +V++ ++ G + DA + + +W A++G
Sbjct: 505 EQG-KQLHVHAIKFGFMSDIFASNSLVNMYAKCGSIEDADRAFSEIPQRGIVSWSAMIGG 563
Query: 282 CKLHGDSDLGEIVANQLFELEPQNAANYILLSNIYAA 318
HG I+ NQ+ L+ + N+I L ++ A
Sbjct: 564 LAQHGHGKEALIMFNQM--LKDCVSPNHITLVSVLCA 598
Score = 106 bits (264), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 81/262 (30%), Positives = 134/262 (51%), Gaps = 13/262 (4%)
Query: 43 MIDGYAKAGDMAAARFLFEQATE-KDVVAWSALISGYVQNGQPNQALKVFLEMESKNVKP 101
++ Y+ + A L +Q+TE + VV+WSALIS YVQNG +AL F EM + VK
Sbjct: 22 LLTFYSNSRRFGYACNLLDQSTEPRTVVSWSALISRYVQNGFHKEALLAFNEMCTLGVKS 81
Query: 102 DEFILVSLMSATSQLGHLELAQWVDSYVSKSSIDLQQDHVIAALLDMNAKCGNMDRALKL 161
+EF +++ A S L + + V + S + V L+ M AKCG + KL
Sbjct: 82 NEFTFPTVLKACSIKKDLNMGKKVHAMTVVSGFE-SDAFVSNTLVVMYAKCGQFSDSKKL 140
Query: 162 FKEMPKRDLVSYCSMIQGLSIHGCGEDAVRLFNSMLMEGLVPDEVAFTIILTACSHSGLV 221
F + + +VS+ ++ + V LF M+ + P+E + +IIL AC +GL
Sbjct: 141 FGMILEPGVVSWNALFSCHVQSDFLAETVDLFKRMVEGKVRPNEYSLSIILNAC--AGLR 198
Query: 222 DEGWN---YFQSMKQKYGISPSPDHFA--CMVDLLSRSGHLGDAYELMKSMHEPHAGAWG 276
D G + MK +G+ D F+ +VD+ +++G + DA ++ + M P +W
Sbjct: 199 DGGIGRTVHGLLMKLGHGL----DQFSANALVDMYAKAGRIEDAVDVFREMIHPDTVSWN 254
Query: 277 ALLGACKLHGDSDLGEIVANQL 298
A++ C LH +DL I+ N++
Sbjct: 255 AIIAGCVLHEYNDLALILLNEM 276
Score = 92.8 bits (229), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 93/346 (26%), Positives = 149/346 (43%), Gaps = 53/346 (15%)
Query: 4 RNVASWNAMLCGFVKDGDLSSARGVFDAM----PEKNVVSFTTMIDG------------- 46
R V SW+A++ +V++G A F+ M + N +F T++
Sbjct: 46 RTVVSWSALISRYVQNGFHKEALLAFNEMCTLGVKSNEFTFPTVLKACSIKKDLNMGKKV 105
Query: 47 ----------------------YAKAGDMAAARFLFEQATEKDVVAWSALISGYVQNGQP 84
YAK G + ++ LF E VV+W+AL S +VQ+
Sbjct: 106 HAMTVVSGFESDAFVSNTLVVMYAKCGQFSDSKKLFGMILEPGVVSWNALFSCHVQSDFL 165
Query: 85 NQALKVFLEMESKNVKPDEFILVSLMSATSQLGHLELAQWVDSYVSKSSIDLQQDHVIAA 144
+ + +F M V+P+E+ L +++A + L + + V + K L Q A
Sbjct: 166 AETVDLFKRMVEGKVRPNEYSLSIILNACAGLRDGGIGRTVHGLLMKLGHGLDQ-FSANA 224
Query: 145 LLDMNAKCGNMDRALKLFKEMPKRDLVSYCSMIQGLSIHGCGEDAVRLFNSMLMEGLVPD 204
L+DM AK G ++ A+ +F+EM D VS+ ++I G +H + A+ L N M G P+
Sbjct: 225 LVDMYAKAGRIEDAVDVFREMIHPDTVSWNAIIAGCVLHEYNDLALILLNEMKKSGSCPN 284
Query: 205 EVAFTIILTACSHSGLVDEGWNYFQSMKQKYGISPSPDHFAC--MVDLLSRSGHLGD--- 259
+ L AC+ GL D G Q I D F ++DL S+ + D
Sbjct: 285 VFTLSSALKACAAMGLKDLGR---QIHSCSVKIDSDSDLFVAVGLIDLYSKCEMMDDARR 341
Query: 260 AYELMKSMHEPHAGAWGALLGACKLHGDSDLGEIVANQLFELEPQN 305
AY+LM + + H A AL+ GD E + FEL +N
Sbjct: 342 AYDLMPT--KDHIIAGNALISGYSQCGDD---EQAISLFFELHHEN 382
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 50/183 (27%), Positives = 94/183 (51%), Gaps = 13/183 (7%)
Query: 36 NVVSFTTMIDGYAKAGDMAAARFLFEQATEKDVVAWSALISGYVQNGQPNQALKVFLEME 95
++ + ++++ YAK G + A F + ++ +V+WSA+I G Q+G +AL +F +M
Sbjct: 522 DIFASNSLVNMYAKCGSIEDADRAFSEIPQRGIVSWSAMIGGLAQHGHGKEALIMFNQML 581
Query: 96 SKNVKPDEFILVSLMSATSQLGHL-ELAQWVDSYVSKSSIDLQQDHVIAALLDMNAKCGN 154
V P+ LVS++ A + G + E Q+ ++ K I Q+H A ++D+ + G
Sbjct: 582 KDCVSPNHITLVSVLCACNHAGLVNEGKQYFETMEEKFGIKPTQEHH-ACMIDLLGRSGK 640
Query: 155 MDRALKLFKEMP-KRDLVSYCSMIQGLSIHG---CGEDAV-RLFNSMLMEGLVPDEVAFT 209
++ A++L +P + D + +++ IH GE A RLF L PD+
Sbjct: 641 LNEAVELVNSIPFEADGSVWGALLGAARIHKNVELGEKAAERLFT------LEPDKSGTL 694
Query: 210 IIL 212
++L
Sbjct: 695 VLL 697
>Medtr1g059810.1 | pentatricopeptide (PPR) repeat protein | HC |
chr1:26032045-26029503 | 20130731
Length = 633
Score = 247 bits (631), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 124/310 (40%), Positives = 192/310 (61%), Gaps = 8/310 (2%)
Query: 39 SFTTMIDGYAKAGDMAAARFLFEQATEKDVVAWSALISGYVQNGQPNQALKVFLEMES-K 97
SF TM Y K G++ R +F++ KD++ W+A+ISGY QNG + L+++ EM
Sbjct: 201 SFLTM---YVKCGEVEYGRKVFDEILVKDLITWNAMISGYAQNGHARRVLEIYREMRKVG 257
Query: 98 NVKPDEFILVSLMSATSQLGHLELAQWVDSYVSKSSIDLQQDHVIAALLDMNAKCGNMDR 157
V PD L+ ++ + + LG + + V+ + + ++ AL++M A+CGN+ R
Sbjct: 258 GVNPDPVTLLGVLCSCANLGAQGIGREVEKEIDRFGFR-SNSFLMNALINMYARCGNLVR 316
Query: 158 ALKLFKEMPKRD--LVSYCSMIQGLSIHGCGEDAVRLFNSMLMEGLVPDEVAFTIILTAC 215
A ++F M +R +VS+ ++I G IHG GE AV LF+ M+ G+ PD F +L+AC
Sbjct: 317 AREVFDCMDERSKSVVSWTAIIGGYGIHGEGETAVELFDVMVRSGVKPDRTVFVSVLSAC 376
Query: 216 SHSGLVDEGWNYFQSMKQKYGISPSPDHFACMVDLLSRSGHLGDAYELMKSMH-EPHAGA 274
SH+GL ++G YF M++KYG+ P P+H++C+VDLL RSG L +A +L+ M +P
Sbjct: 377 SHAGLTEKGLEYFDEMERKYGLQPGPEHYSCLVDLLGRSGRLKEAMDLIDLMKVKPDGPV 436
Query: 275 WGALLGACKLHGDSDLGEIVANQLFELEPQNAANYILLSNIYAAAERWIDVSLVRSRMRE 334
WGALLGACK+H + +L E+ + ELEP N Y+LLSN+Y+ + V VR MR+
Sbjct: 437 WGALLGACKIHRNVELAEVAFQHVIELEPTNIGYYVLLSNLYSDTKNLEGVLKVRVMMRD 496
Query: 335 RSVQKIPGCS 344
R+++K PGCS
Sbjct: 497 RNLRKDPGCS 506
Score = 79.3 bits (194), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 62/268 (23%), Positives = 130/268 (48%), Gaps = 12/268 (4%)
Query: 39 SFTTMIDGYAKAGDMAAARFLFEQATEKDVVAWSALISGYVQNGQPNQALKVFLEMESKN 98
+ +++I+ Y+K AR +F+++ ++++A+ISGY N +A+K+F M +N
Sbjct: 96 THSSLINMYSKTSLPCLARKVFDESPVNLTISYNAMISGYTNNMMIVEAIKLFRRMLCEN 155
Query: 99 -VKPDEFILVSLMSATSQLGHLELAQWVDSYVSKSSIDLQQDHVIA-ALLDMNAKCGNMD 156
+ ++ L+S L L + K + D + + L M KCG ++
Sbjct: 156 RFFVNSVTMLGLVSGILVPEKLRLGFCLHGCCFK--FGFENDLSVGNSFLTMYVKCGEVE 213
Query: 157 RALKLFKEMPKRDLVSYCSMIQGLSIHGCGEDAVRLFNSML-MEGLVPDEVAFTIILTAC 215
K+F E+ +DL+++ +MI G + +G + ++ M + G+ PD V +L +C
Sbjct: 214 YGRKVFDEILVKDLITWNAMISGYAQNGHARRVLEIYREMRKVGGVNPDPVTLLGVLCSC 273
Query: 216 SHSGLVDEGWNYFQSMKQKYGISPSPDHFACMVDLLSRSGHLGDAYELMKSMHEPHAG-- 273
++ G G + + ++G + ++++ +R G+L A E+ M E
Sbjct: 274 ANLGAQGIGREVEKEI-DRFGFRSNSFLMNALINMYARCGNLVRAREVFDCMDERSKSVV 332
Query: 274 AWGALLGACKLHGDSDLGEIVANQLFEL 301
+W A++G +HG+ + A +LF++
Sbjct: 333 SWTAIIGGYGIHGEGE----TAVELFDV 356
>Medtr1g111020.1 | pentatricopeptide (PPR) repeat protein | HC |
chr1:50133605-50130067 | 20130731
Length = 1017
Score = 247 bits (631), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 121/306 (39%), Positives = 200/306 (65%), Gaps = 2/306 (0%)
Query: 40 FTTMIDGYAKAGDMAAARFLFEQATEKDVVAWSALISGYVQNGQPNQALKVFLEMESKNV 99
+++D Y K + A +FE+ T +D+VA++++I+ Y Q+G +ALK++L+M+ ++
Sbjct: 425 INSLLDTYGKCSHIDEASKIFEERTWEDLVAYTSMITAYSQHGDAEEALKLYLQMQVADI 484
Query: 100 KPDEFILVSLMSATSQLGHLELAQWVDSYVSKSSIDLQQDHVIAALLDMNAKCGNMDRAL 159
KPD F+ SL++A + L E + + + K + +L++M AKCG+++ A
Sbjct: 485 KPDPFVCSSLLNACANLSAYEQGKQLHVHAIKFGF-MSDIFASNSLVNMYAKCGSIEDAD 543
Query: 160 KLFKEMPKRDLVSYCSMIQGLSIHGCGEDAVRLFNSMLMEGLVPDEVAFTIILTACSHSG 219
+ F E+P+R +VS+ +MI GL+ HG G++A+ +FN ML + + P+ + +L AC+H+G
Sbjct: 544 RAFSEIPQRGIVSWSAMIGGLAQHGHGKEALIMFNQMLKDCVSPNHITLVSVLCACNHAG 603
Query: 220 LVDEGWNYFQSMKQKYGISPSPDHFACMVDLLSRSGHLGDAYELMKSM-HEPHAGAWGAL 278
LV+EG YF++M++K+GI P+ +H ACM+DLL RSG L +A EL+ S+ E WGAL
Sbjct: 604 LVNEGKQYFETMEEKFGIKPTQEHHACMIDLLGRSGKLNEAVELVNSIPFEADGSVWGAL 663
Query: 279 LGACKLHGDSDLGEIVANQLFELEPQNAANYILLSNIYAAAERWIDVSLVRSRMRERSVQ 338
LGA ++H + +LGE A +LF LEP + +LL+NIYA+A W +V+ VR M+ +V+
Sbjct: 664 LGAARIHKNVELGEKAAERLFTLEPDKSGTLVLLANIYASAGMWENVANVRKVMQNSNVK 723
Query: 339 KIPGCS 344
K PG S
Sbjct: 724 KEPGMS 729
Score = 115 bits (289), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 81/279 (29%), Positives = 144/279 (51%), Gaps = 9/279 (3%)
Query: 43 MIDGYAKAGDMAAARFLFEQATEKD-VVAWSALISGYVQNGQPNQALKVFLEMESKNVKP 101
+ID Y+K M AR ++ KD ++A +ALISGY Q G QA+ +F E+ +N+
Sbjct: 326 LIDLYSKCEMMDDARRAYDLMPTKDHIIAGNALISGYSQCGDDEQAISLFFELHHENIDF 385
Query: 102 DEFILVSLMSATSQLGHLELAQWVDSYVSKSSIDLQQDHVIAALLDMNAKCGNMDRALKL 161
++ L +++ + + L +++ + + + K I +VI +LLD KC ++D A K+
Sbjct: 386 NQTTLSTVLKSVASLQQIKVCKQIHTLSIKCGI-YSDFYVINSLLDTYGKCSHIDEASKI 444
Query: 162 FKEMPKRDLVSYCSMIQGLSIHGCGEDAVRLFNSMLMEGLVPDEVAFTIILTACSHSGLV 221
F+E DLV+Y SMI S HG E+A++L+ M + + PD + +L AC++
Sbjct: 445 FEERTWEDLVAYTSMITAYSQHGDAEEALKLYLQMQVADIKPDPFVCSSLLNACANLSAY 504
Query: 222 DEGWNYFQSMKQKYGISPSPDHFA--CMVDLLSRSGHLGDAYELMKSMHEPHAGAWGALL 279
++G K+G D FA +V++ ++ G + DA + + +W A++
Sbjct: 505 EQG-KQLHVHAIKFGF--MSDIFASNSLVNMYAKCGSIEDADRAFSEIPQRGIVSWSAMI 561
Query: 280 GACKLHGDSDLGEIVANQLFELEPQNAANYILLSNIYAA 318
G HG I+ NQ+ L+ + N+I L ++ A
Sbjct: 562 GGLAQHGHGKEALIMFNQM--LKDCVSPNHITLVSVLCA 598
Score = 107 bits (266), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 81/262 (30%), Positives = 134/262 (51%), Gaps = 13/262 (4%)
Query: 43 MIDGYAKAGDMAAARFLFEQATE-KDVVAWSALISGYVQNGQPNQALKVFLEMESKNVKP 101
++ Y+ + A L +Q+TE + VV+WSALIS YVQNG +AL F EM + VK
Sbjct: 22 LLTFYSNSRRFGYACNLLDQSTEPRTVVSWSALISRYVQNGFHKEALLAFNEMCTLGVKS 81
Query: 102 DEFILVSLMSATSQLGHLELAQWVDSYVSKSSIDLQQDHVIAALLDMNAKCGNMDRALKL 161
+EF +++ A S L + + V + S + V L+ M AKCG + KL
Sbjct: 82 NEFTFPTVLKACSIKKDLNMGKKVHAMTVVSGFE-SDAFVSNTLVVMYAKCGQFSDSKKL 140
Query: 162 FKEMPKRDLVSYCSMIQGLSIHGCGEDAVRLFNSMLMEGLVPDEVAFTIILTACSHSGLV 221
F + + +VS+ ++ + V LF M+ + P+E + +IIL AC +GL
Sbjct: 141 FGMILEPGVVSWNALFSCHVQSDFLAETVDLFKRMVEGKVRPNEYSLSIILNAC--AGLR 198
Query: 222 DEGWN---YFQSMKQKYGISPSPDHFA--CMVDLLSRSGHLGDAYELMKSMHEPHAGAWG 276
D G + MK +G+ D F+ +VD+ +++G + DA ++ + M P +W
Sbjct: 199 DGGIGRTVHGLLMKLGHGL----DQFSANALVDMYAKAGRIEDAVDVFREMIHPDTVSWN 254
Query: 277 ALLGACKLHGDSDLGEIVANQL 298
A++ C LH +DL I+ N++
Sbjct: 255 AIIAGCVLHEYNDLALILLNEM 276
Score = 92.8 bits (229), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 93/346 (26%), Positives = 149/346 (43%), Gaps = 53/346 (15%)
Query: 4 RNVASWNAMLCGFVKDGDLSSARGVFDAM----PEKNVVSFTTMIDG------------- 46
R V SW+A++ +V++G A F+ M + N +F T++
Sbjct: 46 RTVVSWSALISRYVQNGFHKEALLAFNEMCTLGVKSNEFTFPTVLKACSIKKDLNMGKKV 105
Query: 47 ----------------------YAKAGDMAAARFLFEQATEKDVVAWSALISGYVQNGQP 84
YAK G + ++ LF E VV+W+AL S +VQ+
Sbjct: 106 HAMTVVSGFESDAFVSNTLVVMYAKCGQFSDSKKLFGMILEPGVVSWNALFSCHVQSDFL 165
Query: 85 NQALKVFLEMESKNVKPDEFILVSLMSATSQLGHLELAQWVDSYVSKSSIDLQQDHVIAA 144
+ + +F M V+P+E+ L +++A + L + + V + K L Q A
Sbjct: 166 AETVDLFKRMVEGKVRPNEYSLSIILNACAGLRDGGIGRTVHGLLMKLGHGLDQ-FSANA 224
Query: 145 LLDMNAKCGNMDRALKLFKEMPKRDLVSYCSMIQGLSIHGCGEDAVRLFNSMLMEGLVPD 204
L+DM AK G ++ A+ +F+EM D VS+ ++I G +H + A+ L N M G P+
Sbjct: 225 LVDMYAKAGRIEDAVDVFREMIHPDTVSWNAIIAGCVLHEYNDLALILLNEMKKSGSCPN 284
Query: 205 EVAFTIILTACSHSGLVDEGWNYFQSMKQKYGISPSPDHFAC--MVDLLSRSGHLGD--- 259
+ L AC+ GL D G Q I D F ++DL S+ + D
Sbjct: 285 VFTLSSALKACAAMGLKDLGR---QIHSCSVKIDSDSDLFVAVGLIDLYSKCEMMDDARR 341
Query: 260 AYELMKSMHEPHAGAWGALLGACKLHGDSDLGEIVANQLFELEPQN 305
AY+LM + + H A AL+ GD E + FEL +N
Sbjct: 342 AYDLMPT--KDHIIAGNALISGYSQCGDD---EQAISLFFELHHEN 382
Score = 68.9 bits (167), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 50/183 (27%), Positives = 94/183 (51%), Gaps = 13/183 (7%)
Query: 36 NVVSFTTMIDGYAKAGDMAAARFLFEQATEKDVVAWSALISGYVQNGQPNQALKVFLEME 95
++ + ++++ YAK G + A F + ++ +V+WSA+I G Q+G +AL +F +M
Sbjct: 522 DIFASNSLVNMYAKCGSIEDADRAFSEIPQRGIVSWSAMIGGLAQHGHGKEALIMFNQML 581
Query: 96 SKNVKPDEFILVSLMSATSQLGHL-ELAQWVDSYVSKSSIDLQQDHVIAALLDMNAKCGN 154
V P+ LVS++ A + G + E Q+ ++ K I Q+H A ++D+ + G
Sbjct: 582 KDCVSPNHITLVSVLCACNHAGLVNEGKQYFETMEEKFGIKPTQEHH-ACMIDLLGRSGK 640
Query: 155 MDRALKLFKEMP-KRDLVSYCSMIQGLSIHG---CGEDAV-RLFNSMLMEGLVPDEVAFT 209
++ A++L +P + D + +++ IH GE A RLF L PD+
Sbjct: 641 LNEAVELVNSIPFEADGSVWGALLGAARIHKNVELGEKAAERLFT------LEPDKSGTL 694
Query: 210 IIL 212
++L
Sbjct: 695 VLL 697
>Medtr8g089960.1 | pentatricopeptide (PPR) repeat protein | HC |
chr8:37592279-37594828 | 20130731
Length = 572
Score = 247 bits (630), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 127/340 (37%), Positives = 200/340 (58%), Gaps = 2/340 (0%)
Query: 1 MPQRNVASWNAMLCGFVKDGDLSSARGVFDAMPEKNVVSFTTMIDGYAKAGDMAAARFLF 60
MP RN SW M+ G V++G A VF MP+KNVV+FT MI G+ K G + A LF
Sbjct: 182 MPSRNEVSWTVMISGLVENGLHEEAWEVFVRMPQKNVVAFTAMITGFCKQGKIDEAWNLF 241
Query: 61 EQATEKDVVAWSALISGYVQNGQPNQALKVFLEMESKNVKPDEFILVSLMSATSQLGHLE 120
+Q KD W+ +I+G+ QNG+ +AL +F +M ++PD+ VSL +A + L L+
Sbjct: 242 QQIRCKDRACWNIMITGFAQNGRGEEALNLFSQMVRTGMQPDDLTFVSLFTACASLALLD 301
Query: 121 LAQWVDSYVSKSSIDLQQDHVIAALLDMNAKCGNMDRALKLFKEMPKRDLVSYCSMIQGL 180
+ ++ K ++ V AL+ M +KCG + + F ++ D+VS+ ++I
Sbjct: 302 EGRQTNALAIKHGLN-SDLSVSNALVTMYSKCGEIVISELAFDQISHPDIVSWNTIIAAF 360
Query: 181 SIHGCGEDAVRLFNSMLMEGLVPDEVAFTIILTACSHSGLVDEGWNYFQSMKQKYGISPS 240
+ HG + A F+ M+ G+ PD + F +L+AC +G VDE N F M KYGI P
Sbjct: 361 AQHGLYDRARYYFDHMVTAGVTPDGITFLNLLSACCRAGKVDETVNLFDLMVHKYGILPR 420
Query: 241 PDHFACMVDLLSRSGHLGDAYELMKSM-HEPHAGAWGALLGACKLHGDSDLGEIVANQLF 299
+H++C+VD++SR+G L A ++++ M E A WGA L C +H + LGE+ A +
Sbjct: 421 SEHYSCVVDVMSRAGQLLRACKVIQEMPFEADASIWGAFLVGCNIHSNVKLGELAARSIL 480
Query: 300 ELEPQNAANYILLSNIYAAAERWIDVSLVRSRMRERSVQK 339
L+P N+ Y+++SNIYAAA +W DV+ +R M+E+ ++K
Sbjct: 481 NLDPYNSGAYVMMSNIYAAAGKWKDVNRMRVLMKEQGIKK 520
Score = 127 bits (318), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 81/294 (27%), Positives = 152/294 (51%), Gaps = 17/294 (5%)
Query: 1 MPQRNVASWNAMLCGFVKDGDLSSARGVFDAMPEKNVVSFTTMIDGYAKAGDMAAARFLF 60
+P +N+ SWN+++ +++ +++ A F AMPEKNV S+ M+ G+ K G + A+ +F
Sbjct: 86 IPIKNIVSWNSIITACIQNDNINDAFSYFTAMPEKNVASYNAMMSGFVKMGRVEEAKKVF 145
Query: 61 EQATEKDVVAWSALISGYVQ---NGQPNQALKVFLEMESKNVKPDEFILVSLMSATSQLG 117
E+ +VV+++ +I GY++ +A +F M S+N E ++S + G
Sbjct: 146 EEIPRPNVVSYTVMIDGYMKMEGGSGIKRARALFDAMPSRN----EVSWTVMISGLVENG 201
Query: 118 HLELAQWVDSYVSKSSIDLQQDHVIA--ALLDMNAKCGNMDRALKLFKEMPKRDLVSYCS 175
E A W + + + Q +V+A A++ K G +D A LF+++ +D +
Sbjct: 202 LHEEA-W------EVFVRMPQKNVVAFTAMITGFCKQGKIDEAWNLFQQIRCKDRACWNI 254
Query: 176 MIQGLSIHGCGEDAVRLFNSMLMEGLVPDEVAFTIILTACSHSGLVDEGWNYFQSMKQKY 235
MI G + +G GE+A+ LF+ M+ G+ PD++ F + TAC+ L+DEG ++ K+
Sbjct: 255 MITGFAQNGRGEEALNLFSQMVRTGMQPDDLTFVSLFTACASLALLDEG-RQTNALAIKH 313
Query: 236 GISPSPDHFACMVDLLSRSGHLGDAYELMKSMHEPHAGAWGALLGACKLHGDSD 289
G++ +V + S+ G + + + P +W ++ A HG D
Sbjct: 314 GLNSDLSVSNALVTMYSKCGEIVISELAFDQISHPDIVSWNTIIAAFAQHGLYD 367
Score = 111 bits (277), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 68/232 (29%), Positives = 122/232 (52%), Gaps = 10/232 (4%)
Query: 3 QRNVASWNAMLCGFVKDGDLSSARGVFDAMPEKNVVSFTTMIDGYAKAGDMAAARFLFEQ 62
Q++V N + + G++++AR +FD +K++V++ +M+ Y + G + ++ LF
Sbjct: 26 QQDVYFANLNITALSRAGNITAARQLFDKTSQKDIVTYNSMLTAYWQNGFLQHSKSLFNS 85
Query: 63 ATEKDVVAWSALISGYVQNGQPNQALKVFLEMESKNVKPDEFILVSLMSATSQLGHLELA 122
K++V+W+++I+ +QN N A F M KNV ++MS ++G +E A
Sbjct: 86 IPIKNIVSWNSIITACIQNDNINDAFSYFTAMPEKNVASYN----AMMSGFVKMGRVEEA 141
Query: 123 QWVDSYVSKSSIDLQQDHVIAALLDMNAKCGNMDRALKLFKEMPKRDLVSYCSMIQGLSI 182
+ V + + ++ + +I + M G + RA LF MP R+ VS+ MI GL
Sbjct: 142 KKVFEEIPRPNV-VSYTVMIDGYMKMEGGSG-IKRARALFDAMPSRNEVSWTVMISGLVE 199
Query: 183 HGCGEDAVRLFNSMLMEGLVPDEVAFTIILTACSHSGLVDEGWNYFQSMKQK 234
+G E+A +F M + + VAFT ++T G +DE WN FQ ++ K
Sbjct: 200 NGLHEEAWEVFVRMPQKNV----VAFTAMITGFCKQGKIDEAWNLFQQIRCK 247
>Medtr4g094402.5 | pentatricopeptide (PPR) repeat protein | HC |
chr4:37900455-37904049 | 20130731
Length = 654
Score = 246 bits (628), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 125/347 (36%), Positives = 211/347 (60%), Gaps = 6/347 (1%)
Query: 1 MPQRNVASWNAMLCGFVKDGDLSSARGVFDAMPEKNVVSFTTMIDGYAKAGDMAAARFLF 60
M +R+ SWN ++ G+V+ GD+ A +F MP +V+S+ ++I G+++ GD+ + F
Sbjct: 303 MVERDACSWNTVIGGYVQIGDMEEASKLFLEMPIPDVLSWNSIISGFSQIGDLKRVKEFF 362
Query: 61 EQATEKDVVAWSALISGYVQNGQPNQALKVFLEMESKNVKPDEFILVSLMSATSQLGHLE 120
E K++++W+++I+GY +N A+++F +M+ K +PD L S++S ++ L L
Sbjct: 363 ENMPHKNLISWNSVIAGYEKNEDYKGAIELFSQMQLKGERPDRHTLSSILSVSTGLVDLY 422
Query: 121 LAQWVDSYVSKSSI-DLQQDHVIAALLDMNAKCGNMDRALKLFKEMP-KRDLVSYCSMIQ 178
L + + +V+K+ + DL ++ +L+ M ++CG + A +F EM +D++++ +MI
Sbjct: 423 LGKQIHQFVTKTVVPDLPINN---SLITMYSRCGEIGDARHVFNEMKLYKDVITWNAMIG 479
Query: 179 GLSIHGCGEDAVRLFNSMLMEGLVPDEVAFTIILTACSHSGLVDEGWNYFQSMKQKYGIS 238
G + HG A+ LF M + P + F +L AC+H+GLV+EG F SM YGI
Sbjct: 480 GYAFHGFAAQALELFERMKGLKIQPTYITFISVLNACAHAGLVEEGKRQFNSMINDYGIE 539
Query: 239 PSPDHFACMVDLLSRSGHLGDAYELMKSMH-EPHAGAWGALLGACKLHGDSDLGEIVANQ 297
P +HFA +VD+L R G L +A +L+ +M +P WGALLGAC++H + DL ++ A
Sbjct: 540 PRVEHFASLVDILGRQGQLQEAMDLIVNMPVKPDKAVWGALLGACRVHSNVDLAQVAAKA 599
Query: 298 LFELEPQNAANYILLSNIYAAAERWIDVSLVRSRMRERSVQKIPGCS 344
L LEP+++A Y LL N+YA +W D VR+ M E +V+K G S
Sbjct: 600 LIRLEPESSAPYALLFNLYADLGQWDDAERVRALMEENNVKKQAGYS 646
Score = 109 bits (272), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 71/248 (28%), Positives = 134/248 (54%), Gaps = 14/248 (5%)
Query: 1 MPQRNVASWNAMLCGFVKDGDLSSARGVFDAMPEKNVVSFTTMIDGYAKAGDMAAARFLF 60
MPQR+ SWN ++ G+ K+G + A +F++MPE+NVVS +++G+ GD+ +A F
Sbjct: 129 MPQRDCVSWNTVISGYAKNGRMDQAIEIFESMPERNVVSCNAVVNGFLLNGDVDSAVGFF 188
Query: 61 EQATEKDVVAWSALISGYVQNGQPNQALKVFLEMESKNVKPDEFILV--SLMSATSQLGH 118
+ E+D + S L+SG V+NG+ + A ++ +E ++ + D+ + +L++ Q G
Sbjct: 189 RKMGERDSASLSGLVSGLVRNGKLDMAAEILVEYGNEGDEKDDLVYAYNTLIAGYGQRGM 248
Query: 119 LELAQWV------DSYVSKSSIDLQQDHVIA--ALLDMNAKCGNMDRALKLFKEMPKRDL 170
+E A+ V D + +V++ +++ K G++ A +LF M +RD
Sbjct: 249 VEEARHVFDGVMSDQGEGNEGKRRLKRNVVSWNSMMMCYVKAGDVVSARELFDRMVERDA 308
Query: 171 VSYCSMIQGLSIHGCGEDAVRLFNSMLMEGLVPDEVAFTIILTACSHSGLVDEGWNYFQS 230
S+ ++I G G E+A +LF +E +PD +++ I++ S G + +F++
Sbjct: 309 CSWNTVIGGYVQIGDMEEASKLF----LEMPIPDVLSWNSIISGFSQIGDLKRVKEFFEN 364
Query: 231 MKQKYGIS 238
M K IS
Sbjct: 365 MPHKNLIS 372
Score = 97.8 bits (242), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 74/298 (24%), Positives = 136/298 (45%), Gaps = 53/298 (17%)
Query: 3 QRNVASWNAMLCGFVKDGDLSSARGVFDAMPEKNVVSFTTMIDGYAKAGD---MAAARFL 59
RN +WN+M+ G+V+ +++ AR +FD MP +++VS+ +I GY + R L
Sbjct: 66 HRNTVTWNSMITGYVQRREIAKARQLFDEMPLRDIVSWNLIISGYFSCRGSRFVEEGRKL 125
Query: 60 FEQATEKDVVAWSALISGYVQNGQPNQALKVFLEMESKNVKPDEFILVSLMSATSQLGHL 119
F+ ++D V+W+ +ISGY +NG+ +QA+++F M +NV
Sbjct: 126 FDIMPQRDCVSWNTVISGYAKNGRMDQAIEIFESMPERNV-------------------- 165
Query: 120 ELAQWVDSYVSKSSIDLQQDHVIAALLDMNAKCGNMDRALKLFKEMPKRDLVSYCSMIQG 179
VS +++ V LL+ G++D A+ F++M +RD S ++ G
Sbjct: 166 ---------VSCNAV------VNGFLLN-----GDVDSAVGFFRKMGERDSASLSGLVSG 205
Query: 180 LSIHGCGEDAVRLFNSMLMEGLVPDEV--AFTIILTACSHSGLVDEGWNYFQSMKQKYG- 236
L +G + A + EG D++ A+ ++ G+V+E + F + G
Sbjct: 206 LVRNGKLDMAAEILVEYGNEGDEKDDLVYAYNTLIAGYGQRGMVEEARHVFDGVMSDQGE 265
Query: 237 -------ISPSPDHFACMVDLLSRSGHLGDAYELMKSMHEPHAGAWGALLGACKLHGD 287
+ + + M+ ++G + A EL M E A +W ++G GD
Sbjct: 266 GNEGKRRLKRNVVSWNSMMMCYVKAGDVVSARELFDRMVERDACSWNTVIGGYVQIGD 323
>Medtr4g094402.4 | pentatricopeptide (PPR) repeat protein | HC |
chr4:37900455-37904049 | 20130731
Length = 654
Score = 246 bits (628), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 125/347 (36%), Positives = 211/347 (60%), Gaps = 6/347 (1%)
Query: 1 MPQRNVASWNAMLCGFVKDGDLSSARGVFDAMPEKNVVSFTTMIDGYAKAGDMAAARFLF 60
M +R+ SWN ++ G+V+ GD+ A +F MP +V+S+ ++I G+++ GD+ + F
Sbjct: 303 MVERDACSWNTVIGGYVQIGDMEEASKLFLEMPIPDVLSWNSIISGFSQIGDLKRVKEFF 362
Query: 61 EQATEKDVVAWSALISGYVQNGQPNQALKVFLEMESKNVKPDEFILVSLMSATSQLGHLE 120
E K++++W+++I+GY +N A+++F +M+ K +PD L S++S ++ L L
Sbjct: 363 ENMPHKNLISWNSVIAGYEKNEDYKGAIELFSQMQLKGERPDRHTLSSILSVSTGLVDLY 422
Query: 121 LAQWVDSYVSKSSI-DLQQDHVIAALLDMNAKCGNMDRALKLFKEMP-KRDLVSYCSMIQ 178
L + + +V+K+ + DL ++ +L+ M ++CG + A +F EM +D++++ +MI
Sbjct: 423 LGKQIHQFVTKTVVPDLPINN---SLITMYSRCGEIGDARHVFNEMKLYKDVITWNAMIG 479
Query: 179 GLSIHGCGEDAVRLFNSMLMEGLVPDEVAFTIILTACSHSGLVDEGWNYFQSMKQKYGIS 238
G + HG A+ LF M + P + F +L AC+H+GLV+EG F SM YGI
Sbjct: 480 GYAFHGFAAQALELFERMKGLKIQPTYITFISVLNACAHAGLVEEGKRQFNSMINDYGIE 539
Query: 239 PSPDHFACMVDLLSRSGHLGDAYELMKSMH-EPHAGAWGALLGACKLHGDSDLGEIVANQ 297
P +HFA +VD+L R G L +A +L+ +M +P WGALLGAC++H + DL ++ A
Sbjct: 540 PRVEHFASLVDILGRQGQLQEAMDLIVNMPVKPDKAVWGALLGACRVHSNVDLAQVAAKA 599
Query: 298 LFELEPQNAANYILLSNIYAAAERWIDVSLVRSRMRERSVQKIPGCS 344
L LEP+++A Y LL N+YA +W D VR+ M E +V+K G S
Sbjct: 600 LIRLEPESSAPYALLFNLYADLGQWDDAERVRALMEENNVKKQAGYS 646
Score = 109 bits (272), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 71/248 (28%), Positives = 134/248 (54%), Gaps = 14/248 (5%)
Query: 1 MPQRNVASWNAMLCGFVKDGDLSSARGVFDAMPEKNVVSFTTMIDGYAKAGDMAAARFLF 60
MPQR+ SWN ++ G+ K+G + A +F++MPE+NVVS +++G+ GD+ +A F
Sbjct: 129 MPQRDCVSWNTVISGYAKNGRMDQAIEIFESMPERNVVSCNAVVNGFLLNGDVDSAVGFF 188
Query: 61 EQATEKDVVAWSALISGYVQNGQPNQALKVFLEMESKNVKPDEFILV--SLMSATSQLGH 118
+ E+D + S L+SG V+NG+ + A ++ +E ++ + D+ + +L++ Q G
Sbjct: 189 RKMGERDSASLSGLVSGLVRNGKLDMAAEILVEYGNEGDEKDDLVYAYNTLIAGYGQRGM 248
Query: 119 LELAQWV------DSYVSKSSIDLQQDHVIA--ALLDMNAKCGNMDRALKLFKEMPKRDL 170
+E A+ V D + +V++ +++ K G++ A +LF M +RD
Sbjct: 249 VEEARHVFDGVMSDQGEGNEGKRRLKRNVVSWNSMMMCYVKAGDVVSARELFDRMVERDA 308
Query: 171 VSYCSMIQGLSIHGCGEDAVRLFNSMLMEGLVPDEVAFTIILTACSHSGLVDEGWNYFQS 230
S+ ++I G G E+A +LF +E +PD +++ I++ S G + +F++
Sbjct: 309 CSWNTVIGGYVQIGDMEEASKLF----LEMPIPDVLSWNSIISGFSQIGDLKRVKEFFEN 364
Query: 231 MKQKYGIS 238
M K IS
Sbjct: 365 MPHKNLIS 372
Score = 97.8 bits (242), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 74/298 (24%), Positives = 136/298 (45%), Gaps = 53/298 (17%)
Query: 3 QRNVASWNAMLCGFVKDGDLSSARGVFDAMPEKNVVSFTTMIDGYAKAGD---MAAARFL 59
RN +WN+M+ G+V+ +++ AR +FD MP +++VS+ +I GY + R L
Sbjct: 66 HRNTVTWNSMITGYVQRREIAKARQLFDEMPLRDIVSWNLIISGYFSCRGSRFVEEGRKL 125
Query: 60 FEQATEKDVVAWSALISGYVQNGQPNQALKVFLEMESKNVKPDEFILVSLMSATSQLGHL 119
F+ ++D V+W+ +ISGY +NG+ +QA+++F M +NV
Sbjct: 126 FDIMPQRDCVSWNTVISGYAKNGRMDQAIEIFESMPERNV-------------------- 165
Query: 120 ELAQWVDSYVSKSSIDLQQDHVIAALLDMNAKCGNMDRALKLFKEMPKRDLVSYCSMIQG 179
VS +++ V LL+ G++D A+ F++M +RD S ++ G
Sbjct: 166 ---------VSCNAV------VNGFLLN-----GDVDSAVGFFRKMGERDSASLSGLVSG 205
Query: 180 LSIHGCGEDAVRLFNSMLMEGLVPDEV--AFTIILTACSHSGLVDEGWNYFQSMKQKYG- 236
L +G + A + EG D++ A+ ++ G+V+E + F + G
Sbjct: 206 LVRNGKLDMAAEILVEYGNEGDEKDDLVYAYNTLIAGYGQRGMVEEARHVFDGVMSDQGE 265
Query: 237 -------ISPSPDHFACMVDLLSRSGHLGDAYELMKSMHEPHAGAWGALLGACKLHGD 287
+ + + M+ ++G + A EL M E A +W ++G GD
Sbjct: 266 GNEGKRRLKRNVVSWNSMMMCYVKAGDVVSARELFDRMVERDACSWNTVIGGYVQIGD 323
>Medtr4g094402.3 | pentatricopeptide (PPR) repeat protein | HC |
chr4:37900455-37904066 | 20130731
Length = 654
Score = 246 bits (628), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 125/347 (36%), Positives = 211/347 (60%), Gaps = 6/347 (1%)
Query: 1 MPQRNVASWNAMLCGFVKDGDLSSARGVFDAMPEKNVVSFTTMIDGYAKAGDMAAARFLF 60
M +R+ SWN ++ G+V+ GD+ A +F MP +V+S+ ++I G+++ GD+ + F
Sbjct: 303 MVERDACSWNTVIGGYVQIGDMEEASKLFLEMPIPDVLSWNSIISGFSQIGDLKRVKEFF 362
Query: 61 EQATEKDVVAWSALISGYVQNGQPNQALKVFLEMESKNVKPDEFILVSLMSATSQLGHLE 120
E K++++W+++I+GY +N A+++F +M+ K +PD L S++S ++ L L
Sbjct: 363 ENMPHKNLISWNSVIAGYEKNEDYKGAIELFSQMQLKGERPDRHTLSSILSVSTGLVDLY 422
Query: 121 LAQWVDSYVSKSSI-DLQQDHVIAALLDMNAKCGNMDRALKLFKEMP-KRDLVSYCSMIQ 178
L + + +V+K+ + DL ++ +L+ M ++CG + A +F EM +D++++ +MI
Sbjct: 423 LGKQIHQFVTKTVVPDLPINN---SLITMYSRCGEIGDARHVFNEMKLYKDVITWNAMIG 479
Query: 179 GLSIHGCGEDAVRLFNSMLMEGLVPDEVAFTIILTACSHSGLVDEGWNYFQSMKQKYGIS 238
G + HG A+ LF M + P + F +L AC+H+GLV+EG F SM YGI
Sbjct: 480 GYAFHGFAAQALELFERMKGLKIQPTYITFISVLNACAHAGLVEEGKRQFNSMINDYGIE 539
Query: 239 PSPDHFACMVDLLSRSGHLGDAYELMKSMH-EPHAGAWGALLGACKLHGDSDLGEIVANQ 297
P +HFA +VD+L R G L +A +L+ +M +P WGALLGAC++H + DL ++ A
Sbjct: 540 PRVEHFASLVDILGRQGQLQEAMDLIVNMPVKPDKAVWGALLGACRVHSNVDLAQVAAKA 599
Query: 298 LFELEPQNAANYILLSNIYAAAERWIDVSLVRSRMRERSVQKIPGCS 344
L LEP+++A Y LL N+YA +W D VR+ M E +V+K G S
Sbjct: 600 LIRLEPESSAPYALLFNLYADLGQWDDAERVRALMEENNVKKQAGYS 646
Score = 109 bits (272), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 71/248 (28%), Positives = 134/248 (54%), Gaps = 14/248 (5%)
Query: 1 MPQRNVASWNAMLCGFVKDGDLSSARGVFDAMPEKNVVSFTTMIDGYAKAGDMAAARFLF 60
MPQR+ SWN ++ G+ K+G + A +F++MPE+NVVS +++G+ GD+ +A F
Sbjct: 129 MPQRDCVSWNTVISGYAKNGRMDQAIEIFESMPERNVVSCNAVVNGFLLNGDVDSAVGFF 188
Query: 61 EQATEKDVVAWSALISGYVQNGQPNQALKVFLEMESKNVKPDEFILV--SLMSATSQLGH 118
+ E+D + S L+SG V+NG+ + A ++ +E ++ + D+ + +L++ Q G
Sbjct: 189 RKMGERDSASLSGLVSGLVRNGKLDMAAEILVEYGNEGDEKDDLVYAYNTLIAGYGQRGM 248
Query: 119 LELAQWV------DSYVSKSSIDLQQDHVIA--ALLDMNAKCGNMDRALKLFKEMPKRDL 170
+E A+ V D + +V++ +++ K G++ A +LF M +RD
Sbjct: 249 VEEARHVFDGVMSDQGEGNEGKRRLKRNVVSWNSMMMCYVKAGDVVSARELFDRMVERDA 308
Query: 171 VSYCSMIQGLSIHGCGEDAVRLFNSMLMEGLVPDEVAFTIILTACSHSGLVDEGWNYFQS 230
S+ ++I G G E+A +LF +E +PD +++ I++ S G + +F++
Sbjct: 309 CSWNTVIGGYVQIGDMEEASKLF----LEMPIPDVLSWNSIISGFSQIGDLKRVKEFFEN 364
Query: 231 MKQKYGIS 238
M K IS
Sbjct: 365 MPHKNLIS 372
Score = 97.8 bits (242), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 74/298 (24%), Positives = 136/298 (45%), Gaps = 53/298 (17%)
Query: 3 QRNVASWNAMLCGFVKDGDLSSARGVFDAMPEKNVVSFTTMIDGYAKAGD---MAAARFL 59
RN +WN+M+ G+V+ +++ AR +FD MP +++VS+ +I GY + R L
Sbjct: 66 HRNTVTWNSMITGYVQRREIAKARQLFDEMPLRDIVSWNLIISGYFSCRGSRFVEEGRKL 125
Query: 60 FEQATEKDVVAWSALISGYVQNGQPNQALKVFLEMESKNVKPDEFILVSLMSATSQLGHL 119
F+ ++D V+W+ +ISGY +NG+ +QA+++F M +NV
Sbjct: 126 FDIMPQRDCVSWNTVISGYAKNGRMDQAIEIFESMPERNV-------------------- 165
Query: 120 ELAQWVDSYVSKSSIDLQQDHVIAALLDMNAKCGNMDRALKLFKEMPKRDLVSYCSMIQG 179
VS +++ V LL+ G++D A+ F++M +RD S ++ G
Sbjct: 166 ---------VSCNAV------VNGFLLN-----GDVDSAVGFFRKMGERDSASLSGLVSG 205
Query: 180 LSIHGCGEDAVRLFNSMLMEGLVPDEV--AFTIILTACSHSGLVDEGWNYFQSMKQKYG- 236
L +G + A + EG D++ A+ ++ G+V+E + F + G
Sbjct: 206 LVRNGKLDMAAEILVEYGNEGDEKDDLVYAYNTLIAGYGQRGMVEEARHVFDGVMSDQGE 265
Query: 237 -------ISPSPDHFACMVDLLSRSGHLGDAYELMKSMHEPHAGAWGALLGACKLHGD 287
+ + + M+ ++G + A EL M E A +W ++G GD
Sbjct: 266 GNEGKRRLKRNVVSWNSMMMCYVKAGDVVSARELFDRMVERDACSWNTVIGGYVQIGD 323
>Medtr4g094402.2 | pentatricopeptide (PPR) repeat protein | HC |
chr4:37900455-37904049 | 20130731
Length = 654
Score = 246 bits (628), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 125/347 (36%), Positives = 211/347 (60%), Gaps = 6/347 (1%)
Query: 1 MPQRNVASWNAMLCGFVKDGDLSSARGVFDAMPEKNVVSFTTMIDGYAKAGDMAAARFLF 60
M +R+ SWN ++ G+V+ GD+ A +F MP +V+S+ ++I G+++ GD+ + F
Sbjct: 303 MVERDACSWNTVIGGYVQIGDMEEASKLFLEMPIPDVLSWNSIISGFSQIGDLKRVKEFF 362
Query: 61 EQATEKDVVAWSALISGYVQNGQPNQALKVFLEMESKNVKPDEFILVSLMSATSQLGHLE 120
E K++++W+++I+GY +N A+++F +M+ K +PD L S++S ++ L L
Sbjct: 363 ENMPHKNLISWNSVIAGYEKNEDYKGAIELFSQMQLKGERPDRHTLSSILSVSTGLVDLY 422
Query: 121 LAQWVDSYVSKSSI-DLQQDHVIAALLDMNAKCGNMDRALKLFKEMP-KRDLVSYCSMIQ 178
L + + +V+K+ + DL ++ +L+ M ++CG + A +F EM +D++++ +MI
Sbjct: 423 LGKQIHQFVTKTVVPDLPINN---SLITMYSRCGEIGDARHVFNEMKLYKDVITWNAMIG 479
Query: 179 GLSIHGCGEDAVRLFNSMLMEGLVPDEVAFTIILTACSHSGLVDEGWNYFQSMKQKYGIS 238
G + HG A+ LF M + P + F +L AC+H+GLV+EG F SM YGI
Sbjct: 480 GYAFHGFAAQALELFERMKGLKIQPTYITFISVLNACAHAGLVEEGKRQFNSMINDYGIE 539
Query: 239 PSPDHFACMVDLLSRSGHLGDAYELMKSMH-EPHAGAWGALLGACKLHGDSDLGEIVANQ 297
P +HFA +VD+L R G L +A +L+ +M +P WGALLGAC++H + DL ++ A
Sbjct: 540 PRVEHFASLVDILGRQGQLQEAMDLIVNMPVKPDKAVWGALLGACRVHSNVDLAQVAAKA 599
Query: 298 LFELEPQNAANYILLSNIYAAAERWIDVSLVRSRMRERSVQKIPGCS 344
L LEP+++A Y LL N+YA +W D VR+ M E +V+K G S
Sbjct: 600 LIRLEPESSAPYALLFNLYADLGQWDDAERVRALMEENNVKKQAGYS 646
Score = 109 bits (272), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 71/248 (28%), Positives = 134/248 (54%), Gaps = 14/248 (5%)
Query: 1 MPQRNVASWNAMLCGFVKDGDLSSARGVFDAMPEKNVVSFTTMIDGYAKAGDMAAARFLF 60
MPQR+ SWN ++ G+ K+G + A +F++MPE+NVVS +++G+ GD+ +A F
Sbjct: 129 MPQRDCVSWNTVISGYAKNGRMDQAIEIFESMPERNVVSCNAVVNGFLLNGDVDSAVGFF 188
Query: 61 EQATEKDVVAWSALISGYVQNGQPNQALKVFLEMESKNVKPDEFILV--SLMSATSQLGH 118
+ E+D + S L+SG V+NG+ + A ++ +E ++ + D+ + +L++ Q G
Sbjct: 189 RKMGERDSASLSGLVSGLVRNGKLDMAAEILVEYGNEGDEKDDLVYAYNTLIAGYGQRGM 248
Query: 119 LELAQWV------DSYVSKSSIDLQQDHVIA--ALLDMNAKCGNMDRALKLFKEMPKRDL 170
+E A+ V D + +V++ +++ K G++ A +LF M +RD
Sbjct: 249 VEEARHVFDGVMSDQGEGNEGKRRLKRNVVSWNSMMMCYVKAGDVVSARELFDRMVERDA 308
Query: 171 VSYCSMIQGLSIHGCGEDAVRLFNSMLMEGLVPDEVAFTIILTACSHSGLVDEGWNYFQS 230
S+ ++I G G E+A +LF +E +PD +++ I++ S G + +F++
Sbjct: 309 CSWNTVIGGYVQIGDMEEASKLF----LEMPIPDVLSWNSIISGFSQIGDLKRVKEFFEN 364
Query: 231 MKQKYGIS 238
M K IS
Sbjct: 365 MPHKNLIS 372
Score = 97.8 bits (242), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 74/298 (24%), Positives = 136/298 (45%), Gaps = 53/298 (17%)
Query: 3 QRNVASWNAMLCGFVKDGDLSSARGVFDAMPEKNVVSFTTMIDGYAKAGD---MAAARFL 59
RN +WN+M+ G+V+ +++ AR +FD MP +++VS+ +I GY + R L
Sbjct: 66 HRNTVTWNSMITGYVQRREIAKARQLFDEMPLRDIVSWNLIISGYFSCRGSRFVEEGRKL 125
Query: 60 FEQATEKDVVAWSALISGYVQNGQPNQALKVFLEMESKNVKPDEFILVSLMSATSQLGHL 119
F+ ++D V+W+ +ISGY +NG+ +QA+++F M +NV
Sbjct: 126 FDIMPQRDCVSWNTVISGYAKNGRMDQAIEIFESMPERNV-------------------- 165
Query: 120 ELAQWVDSYVSKSSIDLQQDHVIAALLDMNAKCGNMDRALKLFKEMPKRDLVSYCSMIQG 179
VS +++ V LL+ G++D A+ F++M +RD S ++ G
Sbjct: 166 ---------VSCNAV------VNGFLLN-----GDVDSAVGFFRKMGERDSASLSGLVSG 205
Query: 180 LSIHGCGEDAVRLFNSMLMEGLVPDEV--AFTIILTACSHSGLVDEGWNYFQSMKQKYG- 236
L +G + A + EG D++ A+ ++ G+V+E + F + G
Sbjct: 206 LVRNGKLDMAAEILVEYGNEGDEKDDLVYAYNTLIAGYGQRGMVEEARHVFDGVMSDQGE 265
Query: 237 -------ISPSPDHFACMVDLLSRSGHLGDAYELMKSMHEPHAGAWGALLGACKLHGD 287
+ + + M+ ++G + A EL M E A +W ++G GD
Sbjct: 266 GNEGKRRLKRNVVSWNSMMMCYVKAGDVVSARELFDRMVERDACSWNTVIGGYVQIGD 323
>Medtr3g027990.1 | pentatricopeptide (PPR) repeat protein | HC |
chr3:8840204-8842727 | 20130731
Length = 623
Score = 245 bits (626), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 134/388 (34%), Positives = 215/388 (55%), Gaps = 45/388 (11%)
Query: 1 MPQRNVASWNAMLCGFVKDGDLSSARGVF-----DAMPEKNVVSFTTMIDG--------- 46
MP+++ SWN+++ G K G L VF D+ + N +F ++I
Sbjct: 106 MPKKDFVSWNSLVSGLAKIGQLGECLSVFCKMKSDSELKLNEFTFLSVISACVSEKACDE 165
Query: 47 --------------------------YAKAGDMAAARFLFEQ--ATEKDVVAWSALISGY 78
Y K G + +A LF + +EK +V+W+++++
Sbjct: 166 GYYVHCCAMKLGLVYEVKVVNALVNMYGKFGFVESAFRLFSEMPESEKSIVSWNSIVAVC 225
Query: 79 VQNGQPNQALKVFLEMESKNVKPDEFILVSLMSATSQLGHLELAQWVDSYVSKSSIDLQQ 138
QNG PN+A F M PD+ +VSL+ A + + + + +D +
Sbjct: 226 AQNGMPNEAFNCFDMMRVNGFFPDDATMVSLLQACENFPLGRMVEVLHGVIFTCGLD-EN 284
Query: 139 DHVIAALLDMNAKCGNMDRALKLFKEMPKRDLVSYCSMIQGLSIHGCGEDAVRLFNSMLM 198
++ LL++ +K G ++ + K+F+E+ K D V++ +M+ G ++HGCG++A+ F ++
Sbjct: 285 LTIVTTLLNLYSKLGRLNNSRKVFEEISKPDKVAWTAMLAGYAMHGCGKEAIEFFERIVR 344
Query: 199 E-GLVPDEVAFTIILTACSHSGLVDEGWNYFQSMKQKYGISPSPDHFACMVDLLSRSGHL 257
E G+ PD V FT +L+ACSHSGLV EG +F+ M Y + P DH++CMVDLL R G L
Sbjct: 345 EEGMEPDHVTFTHLLSACSHSGLVKEGKYFFRVMSDVYKVQPRLDHYSCMVDLLGRCGLL 404
Query: 258 GDAYELMKSM-HEPHAGAWGALLGACKLHGDSDLGEIVANQLFELEPQNAANYILLSNIY 316
DA+EL+K+M EP++G WGALLGAC++H + DLG+ A L L+P + NYI+LSN+Y
Sbjct: 405 DDAHELIKNMPFEPNSGVWGALLGACRVHRNIDLGKEAAKNLIALDPSDPRNYIMLSNMY 464
Query: 317 AAAERWIDVSLVRSRMRERSVQKIPGCS 344
+AA W D S VR+ M+ + + + GCS
Sbjct: 465 SAAGLWNDASKVRTLMKNKVLTRNQGCS 492
Score = 99.8 bits (247), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 68/252 (26%), Positives = 129/252 (51%), Gaps = 15/252 (5%)
Query: 43 MIDGYAKAGDMAAARFLFEQATEKDVVAWSALISGYVQNGQPNQALKVFLEMESKN-VKP 101
++ Y K G A LF++ +KD V+W++L+SG + GQ + L VF +M+S + +K
Sbjct: 86 LVSCYLKMGPTKDAYLLFDEMPKKDFVSWNSLVSGLAKIGQLGECLSVFCKMKSDSELKL 145
Query: 102 DEFILVSLMSATSQLGHLELAQWVDSYVSKSSIDLQQDHVIAALLDMNAKCGNMDRALKL 161
+EF +S++SA + +V K + + + V+ AL++M K G ++ A +L
Sbjct: 146 NEFTFLSVISACVSEKACDEGYYVHCCAMKLGL-VYEVKVVNALVNMYGKFGFVESAFRL 204
Query: 162 FKEMP--KRDLVSYCSMIQGLSIHGCGEDAVRLFNSMLMEGLVPDEVAFTIILTACSHSG 219
F EMP ++ +VS+ S++ + +G +A F+ M + G PD+ +L AC +
Sbjct: 205 FSEMPESEKSIVSWNSIVAVCAQNGMPNEAFNCFDMMRVNGFFPDDATMVSLLQACENFP 264
Query: 220 L-----VDEGWNYFQSMKQKYGISPSPDHFACMVDLLSRSGHLGDAYELMKSMHEPHAGA 274
L V G + + + I + +++L S+ G L ++ ++ + + +P A
Sbjct: 265 LGRMVEVLHGVIFTCGLDENLTIVTT------LLNLYSKLGRLNNSRKVFEEISKPDKVA 318
Query: 275 WGALLGACKLHG 286
W A+L +HG
Sbjct: 319 WTAMLAGYAMHG 330
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 46/185 (24%), Positives = 87/185 (47%), Gaps = 9/185 (4%)
Query: 105 ILVSLMSATSQLGHLELAQWVDSYVSKSSIDLQQDHVIAALLDMNAKCGNMDRALKLFKE 164
+++ L S++S + + + + ++V KS +D + + L+ K G A LF E
Sbjct: 51 LILHLKSSSS----VSICRIIHAHVIKS-LDYRDGFIGDQLVSCYLKMGPTKDAYLLFDE 105
Query: 165 MPKRDLVSYCSMIQGLSIHGCGEDAVRLFNSMLMEG-LVPDEVAFTIILTACSHSGLVDE 223
MPK+D VS+ S++ GL+ G + + +F M + L +E F +++AC DE
Sbjct: 106 MPKKDFVSWNSLVSGLAKIGQLGECLSVFCKMKSDSELKLNEFTFLSVISACVSEKACDE 165
Query: 224 GWNYFQSMKQKYGISPSPDHFACMVDLLSRSGHLGDAYELMKSMHEPHAG--AWGALLGA 281
G+ Y K G+ +V++ + G + A+ L M E +W +++
Sbjct: 166 GY-YVHCCAMKLGLVYEVKVVNALVNMYGKFGFVESAFRLFSEMPESEKSIVSWNSIVAV 224
Query: 282 CKLHG 286
C +G
Sbjct: 225 CAQNG 229
>Medtr1g112500.1 | pentatricopeptide (PPR) repeat protein | HC |
chr1:50925869-50923259 | 20130731
Length = 710
Score = 245 bits (625), Expect = 5e-65, Method: Compositional matrix adjust.
Identities = 140/386 (36%), Positives = 211/386 (54%), Gaps = 43/386 (11%)
Query: 1 MPQRNVASWNAMLCGFVKDGDLSSARGVFDAMP--------------------------- 33
M +++V +W ++ G+V +GD SA + +M
Sbjct: 276 MEEKDVVTWTTLINGYVVNGDARSALMLCRSMQLEGVKPNLVSVASLLSACGDLVSLKHG 335
Query: 34 ------------EKNVVSFTTMIDGYAKAGDMAAARFLFEQATEKDVVAWSALISGYVQN 81
E VV T +ID YAK + + +F + ++K W+A++SG+V N
Sbjct: 336 KCLHAWAIRQNIESEVVMETALIDMYAKCNEGNLSYKVFMKTSKKRTAPWNAVLSGFVHN 395
Query: 82 GQPNQALKVFLEMESKNVKPDEFILVSLMSATSQLGHLELAQWVDSYVSKSSIDLQQDHV 141
A+++F EM +NV+PD SL+ A + L L+ A + Y+ K L + V
Sbjct: 396 RLARNAVQLFKEMLLENVQPDSPTFNSLLPAYAILADLKQAMNMHCYLVKLGF-LCKLEV 454
Query: 142 IAALLDMNAKCGNMDRALKLFKEMP--KRDLVSYCSMIQGLSIHGCGEDAVRLFNSMLME 199
+ L+D+ +KCG + A ++F +P +D++ + ++I HG GE AV LFN M+
Sbjct: 455 ASMLVDIYSKCGTLGYAHQIFDMIPLKDKDIIIWTAIIDAYGKHGYGEMAVSLFNQMVQS 514
Query: 200 GLVPDEVAFTIILTACSHSGLVDEGWNYFQSMKQKYGISPSPDHFACMVDLLSRSGHLGD 259
G P+EV FT +L ACSH+GLVD+G + F M +KY + PS DH+ C+VDLL R+G L D
Sbjct: 515 GEKPNEVTFTSVLHACSHAGLVDQGLSLFNLMLKKYQVIPSVDHYTCIVDLLGRAGRLND 574
Query: 260 AYELMKSMHEPHAGA-WGALLGACKLHGDSDLGEIVANQLFELEPQNAANYILLSNIYAA 318
AY L+++M H A WGALLGAC +H + +LGEI A FELEP+N NY+LL+ +YAA
Sbjct: 575 AYNLIRTMPITHNHAVWGALLGACVIHENVELGEIAARWTFELEPENTGNYVLLAKLYAA 634
Query: 319 AERWIDVSLVRSRMRERSVQKIPGCS 344
RW D VR+ + E ++K P S
Sbjct: 635 VGRWRDAERVRNMVNEVGLRKTPANS 660
Score = 118 bits (296), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 86/293 (29%), Positives = 146/293 (49%), Gaps = 10/293 (3%)
Query: 14 CGFVKDGDLSSARGVFDAMPEK----NVVSFTTMIDGYAKAGDMAAARFLFEQATEKDVV 69
CG +K+ +L R V EK NVV ++D Y K G+M AR L EKDVV
Sbjct: 225 CGVLKNVEL--GREVRALTLEKGYWGNVVVRNALLDMYVKCGEMEEARLLLNGMEEKDVV 282
Query: 70 AWSALISGYVQNGQPNQALKVFLEMESKNVKPDEFILVSLMSATSQLGHLELAQWVDSYV 129
W+ LI+GYV NG AL + M+ + VKP+ + SL+SA L L+ + + ++
Sbjct: 283 TWTTLINGYVVNGDARSALMLCRSMQLEGVKPNLVSVASLLSACGDLVSLKHGKCLHAWA 342
Query: 130 SKSSIDLQQDHVIAALLDMNAKCGNMDRALKLFKEMPKRDLVSYCSMIQGLSIHGCGEDA 189
+ +I+ + + AL+DM AKC + + K+F + K+ + +++ G + +A
Sbjct: 343 IRQNIE-SEVVMETALIDMYAKCNEGNLSYKVFMKTSKKRTAPWNAVLSGFVHNRLARNA 401
Query: 190 VRLFNSMLMEGLVPDEVAFTIILTACSHSGLVDEGWNYFQSMKQKYGISPSPDHFACMVD 249
V+LF ML+E + PD F +L A + + + N K G + + +VD
Sbjct: 402 VQLFKEMLLENVQPDSPTFNSLLPAYAILADLKQAMN-MHCYLVKLGFLCKLEVASMLVD 460
Query: 250 LLSRSGHLGDAYEL--MKSMHEPHAGAWGALLGACKLHGDSDLGEIVANQLFE 300
+ S+ G LG A+++ M + + W A++ A HG ++ + NQ+ +
Sbjct: 461 IYSKCGTLGYAHQIFDMIPLKDKDIIIWTAIIDAYGKHGYGEMAVSLFNQMVQ 513
Score = 103 bits (258), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 82/329 (24%), Positives = 149/329 (45%), Gaps = 62/329 (18%)
Query: 1 MPQRNVASWNAMLCGFVKDGDLSSARGVF-------DAMPEK------------------ 35
+P+RN+ SWN M+ +V+ G A +F AMP+
Sbjct: 73 LPKRNLFSWNTMMRMYVQMGRPHDALNMFVEMLHSGRAMPDHFTYPIVIKACSELLFVDM 132
Query: 36 -------------NVVSFT--TMIDGYAKAGDMAAARFLFEQATEKDVVAWSALISGYVQ 80
++ SF +++ Y G+ AAR +FE E+ VV+W+ LI+G +
Sbjct: 133 GVGVHGQTAKCGFDLNSFVQNSLLAMYMNVGEKEAARLVFELMQERTVVSWNTLINGLFR 192
Query: 81 NGQPNQALKVFLEMESKNVKPDEFILVSLMSATSQLGHLELAQWVDSYVSKSSIDLQQDH 140
N AL+V+ M + V D +VS++ A L ++EL + V ++ L++ +
Sbjct: 193 NNCAEDALRVYSRMVDEGVGVDCATVVSVLQACGVLKNVELGREV------RALTLEKGY 246
Query: 141 -----VIAALLDMNAKCGNMDRALKLFKEMPKRDLVSYCSMIQGLSIHGCGEDAVRLFNS 195
V ALLDM KCG M+ A L M ++D+V++ ++I G ++G A+ L S
Sbjct: 247 WGNVVVRNALLDMYVKCGEMEEARLLLNGMEEKDVVTWTTLINGYVVNGDARSALMLCRS 306
Query: 196 MLMEGLVPDEVAFTIILTACS-----HSGLVDEGWNYFQSMKQKYGISPSPDHFACMVDL 250
M +EG+ P+ V+ +L+AC G W Q+++ + + + ++D+
Sbjct: 307 MQLEGVKPNLVSVASLLSACGDLVSLKHGKCLHAWAIRQNIESEVVMETA------LIDM 360
Query: 251 LSRSGHLGDAYELMKSMHEPHAGAWGALL 279
++ +Y++ + W A+L
Sbjct: 361 YAKCNEGNLSYKVFMKTSKKRTAPWNAVL 389
Score = 96.7 bits (239), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 66/243 (27%), Positives = 123/243 (50%), Gaps = 3/243 (1%)
Query: 47 YAKAGDMAAARFLFEQATEKDVVAWSALISGYVQNGQPNQALKVFLEM-ESKNVKPDEFI 105
YA+ + A LF++ ++++ +W+ ++ YVQ G+P+ AL +F+EM S PD F
Sbjct: 57 YAQCHHASYASQLFDKLPKRNLFSWNTMMRMYVQMGRPHDALNMFVEMLHSGRAMPDHFT 116
Query: 106 LVSLMSATSQLGHLELAQWVDSYVSKSSIDLQQDHVIAALLDMNAKCGNMDRALKLFKEM 165
++ A S+L +++ V +K DL V +LL M G + A +F+ M
Sbjct: 117 YPIVIKACSELLFVDMGVGVHGQTAKCGFDLN-SFVQNSLLAMYMNVGEKEAARLVFELM 175
Query: 166 PKRDLVSYCSMIQGLSIHGCGEDAVRLFNSMLMEGLVPDEVAFTIILTACSHSGLVDEGW 225
+R +VS+ ++I GL + C EDA+R+++ M+ EG+ D +L AC V+ G
Sbjct: 176 QERTVVSWNTLINGLFRNNCAEDALRVYSRMVDEGVGVDCATVVSVLQACGVLKNVELG- 234
Query: 226 NYFQSMKQKYGISPSPDHFACMVDLLSRSGHLGDAYELMKSMHEPHAGAWGALLGACKLH 285
+++ + G + ++D+ + G + +A L+ M E W L+ ++
Sbjct: 235 REVRALTLEKGYWGNVVVRNALLDMYVKCGEMEEARLLLNGMEEKDVVTWTTLINGYVVN 294
Query: 286 GDS 288
GD+
Sbjct: 295 GDA 297
>Medtr6g032915.1 | pentatricopeptide (PPR) repeat protein | HC |
chr6:10235820-10240817 | 20130731
Length = 1144
Score = 245 bits (625), Expect = 5e-65, Method: Compositional matrix adjust.
Identities = 128/382 (33%), Positives = 209/382 (54%), Gaps = 41/382 (10%)
Query: 1 MPQRNVASWNAMLCGFVKDGDLSSARGVFDAMPEKNV----VSFTTMIDG---------- 46
+ + +V SW AM+ G+ + + A +F M ++ + + F + I
Sbjct: 547 LKENDVVSWTAMIAGYTQHDKFTEALNLFKEMQDQGIKSDNIGFASAISACAGIQALDQG 606
Query: 47 -------------------------YAKAGDMAAARFLFEQATEKDVVAWSALISGYVQN 81
YA+ G + A F+Q KD V+W++L+SG+ Q+
Sbjct: 607 RQIHAQSCLSGYSDDLSIGNALVSLYARCGKVREAYAAFDQIYAKDNVSWNSLVSGFAQS 666
Query: 82 GQPNQALKVFLEMESKNVKPDEFILVSLMSATSQLGHLELAQWVDSYVSKSSIDLQQDHV 141
G +AL +F +M ++ + F S +SA + + ++ + + + + K+ D + V
Sbjct: 667 GYFEEALNIFAQMNKAGLEINSFTFGSAVSAAANIANVRIGKQIHGMIRKTGYD-SETEV 725
Query: 142 IAALLDMNAKCGNMDRALKLFKEMPKRDLVSYCSMIQGLSIHGCGEDAVRLFNSMLMEGL 201
AL+ + AKCG +D A + F EMP ++ +S+ SMI G S HGCG +A++LF M +
Sbjct: 726 SNALITLYAKCGTIDDAERHFFEMPDKNEISWNSMITGYSQHGCGFEALKLFEDMKQLDV 785
Query: 202 VPDEVAFTIILTACSHSGLVDEGWNYFQSMKQKYGISPSPDHFACMVDLLSRSGHLGDAY 261
+P+ V F +L+ACSH GLVDEG +YF+SM + + + P P+H+AC+VDLL RSG L A
Sbjct: 786 LPNHVTFVGVLSACSHVGLVDEGISYFRSMSEAHNLVPKPEHYACVVDLLGRSGLLSRAK 845
Query: 262 ELMKSMH-EPHAGAWGALLGACKLHGDSDLGEIVANQLFELEPQNAANYILLSNIYAAAE 320
++ M +P A W LL AC +H + D+GE A+ L ELEP+++A Y+L+SN+YA +
Sbjct: 846 RFVEEMPIQPDAMVWRTLLSACNVHKNIDIGEFAASHLLELEPKDSATYVLVSNMYAVSG 905
Query: 321 RWIDVSLVRSRMRERSVQKIPG 342
+W R M++R V+K PG
Sbjct: 906 KWDCRDRTRQMMKDRGVKKEPG 927
Score = 118 bits (296), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 84/319 (26%), Positives = 144/319 (45%), Gaps = 42/319 (13%)
Query: 1 MPQRNVASWNAMLCGFVKDGDLSSARGVFDAMPEKNV------------------VSF-- 40
MP R+++ WN + F+ + + G+F M KNV VSF
Sbjct: 142 MPIRSLSCWNRIFNTFIAERLMGRVPGLFRRMLTKNVEFDERIFAVVLRGCSGNAVSFRF 201
Query: 41 --------------------TTMIDGYAKAGDMAAARFLFEQATEKDVVAWSALISGYVQ 80
+ID Y K G +++A+ +FE +D V+W A+ISG Q
Sbjct: 202 VEQIHAKTITSGFESSTFICNPLIDLYFKNGFLSSAKKVFENLKARDSVSWVAMISGLSQ 261
Query: 81 NGQPNQALKVFLEMESKNVKPDEFILVSLMSATSQLGHLELAQWVDSYVSKSSIDLQQDH 140
NG +A+ +F +M + + P +I S++SA +++ E + + V K + +
Sbjct: 262 NGYEEEAMLLFCQMHTSGICPTPYIFSSVLSACTKVEFFEFGKQLHGLVLKQGFS-SETY 320
Query: 141 VIAALLDMNAKCGNMDRALKLFKEMPKRDLVSYCSMIQGLSIHGCGEDAVRLFNSMLMEG 200
V AL+ + ++ GN+ A ++F M +RD VSY S+I GL+ G A+ LF M ++
Sbjct: 321 VCNALVTLYSRSGNLSSAEQIFHCMSQRDRVSYNSLISGLAQQGYINRALALFKKMNLDC 380
Query: 201 LVPDEVAFTIILTACSHSGLVDEGWNYFQSMKQKYGISPSPDHFACMVDLLSRSGHLGDA 260
PD V +L+AC+ G + G F S K G++ ++DL + + A
Sbjct: 381 QKPDCVTVASLLSACASVGALPNG-KQFHSYAIKAGMTSDIVVEGSLLDLYVKCSDIKTA 439
Query: 261 YELMKSMHEPHAGAWGALL 279
+E + + W +L
Sbjct: 440 HEFFLACETENVVLWNVML 458
Score = 115 bits (288), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 77/319 (24%), Positives = 149/319 (46%), Gaps = 43/319 (13%)
Query: 1 MPQRNVASWNAMLCGFVKDGDLSSARGVFDAM------PE-------------------- 34
M QR+ S+N+++ G + G ++ A +F M P+
Sbjct: 345 MSQRDRVSYNSLISGLAQQGYINRALALFKKMNLDCQKPDCVTVASLLSACASVGALPNG 404
Query: 35 -------------KNVVSFTTMIDGYAKAGDMAAARFLFEQATEKDVVAWSALISGYVQN 81
++V +++D Y K D+ A F ++VV W+ ++ GY Q
Sbjct: 405 KQFHSYAIKAGMTSDIVVEGSLLDLYVKCSDIKTAHEFFLACETENVVLWNVMLVGYGQL 464
Query: 82 GQPNQALKVFLEMESKNVKPDEFILVSLMSATSQLGHLELAQWVDSYVSKSSIDLQQDHV 141
N++ ++F +M+ + + P++F S++ + LG +L + + + V K+ +V
Sbjct: 465 DNLNKSFQIFTQMQIEGIVPNQFTYPSILKTCTTLGATDLGEQIHTQVLKTGFQFNV-YV 523
Query: 142 IAALLDMNAKCGNMDRALKLFKEMPKRDLVSYCSMIQGLSIHGCGEDAVRLFNSMLMEGL 201
+ L+DM AK G +D ALK+F+ + + D+VS+ +MI G + H +A+ LF M +G+
Sbjct: 524 SSVLIDMYAKHGKLDHALKIFRRLKENDVVSWTAMIAGYTQHDKFTEALNLFKEMQDQGI 583
Query: 202 VPDEVAFTIILTACSHSGLVDEGWN-YFQSMKQKYGISPSPDHFACMVDLLSRSGHLGDA 260
D + F ++AC+ +D+G + QS Y S + +V L +R G + +A
Sbjct: 584 KSDNIGFASAISACAGIQALDQGRQIHAQSCLSGYSDDLSIGN--ALVSLYARCGKVREA 641
Query: 261 YELMKSMHEPHAGAWGALL 279
Y ++ +W +L+
Sbjct: 642 YAAFDQIYAKDNVSWNSLV 660
Score = 101 bits (251), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 70/253 (27%), Positives = 126/253 (49%), Gaps = 6/253 (2%)
Query: 36 NVVSFTTMIDGYAKAGDMAAARFLFEQATEKDVVAWSALISGYVQNGQPNQALKVFLEME 95
NV + +ID YAK G + A +F + E DVV+W+A+I+GY Q+ + +AL +F EM+
Sbjct: 520 NVYVSSVLIDMYAKHGKLDHALKIFRRLKENDVVSWTAMIAGYTQHDKFTEALNLFKEMQ 579
Query: 96 SKNVKPDEFILVSLMSATSQLGHLELAQWV--DSYVSKSSIDLQQDHVIAALLDMNAKCG 153
+ +K D S +SA + + L+ + + S +S S DL + AL+ + A+CG
Sbjct: 580 DQGIKSDNIGFASAISACAGIQALDQGRQIHAQSCLSGYSDDLS---IGNALVSLYARCG 636
Query: 154 NMDRALKLFKEMPKRDLVSYCSMIQGLSIHGCGEDAVRLFNSMLMEGLVPDEVAFTIILT 213
+ A F ++ +D VS+ S++ G + G E+A+ +F M GL + F ++
Sbjct: 637 KVREAYAAFDQIYAKDNVSWNSLVSGFAQSGYFEEALNIFAQMNKAGLEINSFTFGSAVS 696
Query: 214 ACSHSGLVDEGWNYFQSMKQKYGISPSPDHFACMVDLLSRSGHLGDAYELMKSMHEPHAG 273
A ++ V G M +K G + ++ L ++ G + DA M + +
Sbjct: 697 AAANIANVRIG-KQIHGMIRKTGYDSETEVSNALITLYAKCGTIDDAERHFFEMPDKNEI 755
Query: 274 AWGALLGACKLHG 286
+W +++ HG
Sbjct: 756 SWNSMITGYSQHG 768
Score = 86.3 bits (212), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 66/257 (25%), Positives = 119/257 (46%), Gaps = 15/257 (5%)
Query: 37 VVSFTTMIDGYAKAGDMAAARFLFEQATEKDVVAWSALISGYVQNGQPNQALKVFLEMES 96
VV +ID Y GD+ A +F++ + + W+ + + ++ + +F M +
Sbjct: 116 VVLCERLIDFYLAFGDLNCAVNVFDEMPIRSLSCWNRIFNTFIAERLMGRVPGLFRRMLT 175
Query: 97 KNVKPDEFIL-VSLMSATSQLGHLELAQWVDSYVSKSSIDLQQDHVIAALLDMNAKCGNM 155
KNV+ DE I V L + + + + S + + L+D+ K G +
Sbjct: 176 KNVEFDERIFAVVLRGCSGNAVSFRFVEQIHAKTITSGFE-SSTFICNPLIDLYFKNGFL 234
Query: 156 DRALKLFKEMPKRDLVSYCSMIQGLSIHGCGEDAVRLFNSMLMEGLVPDEVAFTIILTAC 215
A K+F+ + RD VS+ +MI GLS +G E+A+ LF M G+ P F+ +L+AC
Sbjct: 235 SSAKKVFENLKARDSVSWVAMISGLSQNGYEEEAMLLFCQMHTSGICPTPYIFSSVLSAC 294
Query: 216 SHSGLVDEGWNYFQSMKQKYGI----SPSPDHFAC--MVDLLSRSGHLGDAYELMKSMHE 269
+ +F+ KQ +G+ S + + C +V L SRSG+L A ++ M +
Sbjct: 295 TKV-------EFFEFGKQLHGLVLKQGFSSETYVCNALVTLYSRSGNLSSAEQIFHCMSQ 347
Query: 270 PHAGAWGALLGACKLHG 286
++ +L+ G
Sbjct: 348 RDRVSYNSLISGLAQQG 364
>Medtr4g094402.1 | pentatricopeptide (PPR) repeat protein | HC |
chr4:37900570-37903619 | 20130731
Length = 662
Score = 244 bits (624), Expect = 7e-65, Method: Compositional matrix adjust.
Identities = 124/345 (35%), Positives = 210/345 (60%), Gaps = 6/345 (1%)
Query: 1 MPQRNVASWNAMLCGFVKDGDLSSARGVFDAMPEKNVVSFTTMIDGYAKAGDMAAARFLF 60
M +R+ SWN ++ G+V+ GD+ A +F MP +V+S+ ++I G+++ GD+ + F
Sbjct: 229 MVERDACSWNTVIGGYVQIGDMEEASKLFLEMPIPDVLSWNSIISGFSQIGDLKRVKEFF 288
Query: 61 EQATEKDVVAWSALISGYVQNGQPNQALKVFLEMESKNVKPDEFILVSLMSATSQLGHLE 120
E K++++W+++I+GY +N A+++F +M+ K +PD L S++S ++ L L
Sbjct: 289 ENMPHKNLISWNSVIAGYEKNEDYKGAIELFSQMQLKGERPDRHTLSSILSVSTGLVDLY 348
Query: 121 LAQWVDSYVSKSSI-DLQQDHVIAALLDMNAKCGNMDRALKLFKEMP-KRDLVSYCSMIQ 178
L + + +V+K+ + DL ++ +L+ M ++CG + A +F EM +D++++ +MI
Sbjct: 349 LGKQIHQFVTKTVVPDLPINN---SLITMYSRCGEIGDARHVFNEMKLYKDVITWNAMIG 405
Query: 179 GLSIHGCGEDAVRLFNSMLMEGLVPDEVAFTIILTACSHSGLVDEGWNYFQSMKQKYGIS 238
G + HG A+ LF M + P + F +L AC+H+GLV+EG F SM YGI
Sbjct: 406 GYAFHGFAAQALELFERMKGLKIQPTYITFISVLNACAHAGLVEEGKRQFNSMINDYGIE 465
Query: 239 PSPDHFACMVDLLSRSGHLGDAYELMKSMH-EPHAGAWGALLGACKLHGDSDLGEIVANQ 297
P +HFA +VD+L R G L +A +L+ +M +P WGALLGAC++H + DL ++ A
Sbjct: 466 PRVEHFASLVDILGRQGQLQEAMDLIVNMPVKPDKAVWGALLGACRVHSNVDLAQVAAKA 525
Query: 298 LFELEPQNAANYILLSNIYAAAERWIDVSLVRSRMRERSVQKIPG 342
L LEP+++A Y LL N+YA +W D VR+ M E +V+K G
Sbjct: 526 LIRLEPESSAPYALLFNLYADLGQWDDAERVRALMEENNVKKQAG 570
Score = 109 bits (273), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 71/248 (28%), Positives = 134/248 (54%), Gaps = 14/248 (5%)
Query: 1 MPQRNVASWNAMLCGFVKDGDLSSARGVFDAMPEKNVVSFTTMIDGYAKAGDMAAARFLF 60
MPQR+ SWN ++ G+ K+G + A +F++MPE+NVVS +++G+ GD+ +A F
Sbjct: 55 MPQRDCVSWNTVISGYAKNGRMDQAIEIFESMPERNVVSCNAVVNGFLLNGDVDSAVGFF 114
Query: 61 EQATEKDVVAWSALISGYVQNGQPNQALKVFLEMESKNVKPDEFILV--SLMSATSQLGH 118
+ E+D + S L+SG V+NG+ + A ++ +E ++ + D+ + +L++ Q G
Sbjct: 115 RKMGERDSASLSGLVSGLVRNGKLDMAAEILVEYGNEGDEKDDLVYAYNTLIAGYGQRGM 174
Query: 119 LELAQWV------DSYVSKSSIDLQQDHVIA--ALLDMNAKCGNMDRALKLFKEMPKRDL 170
+E A+ V D + +V++ +++ K G++ A +LF M +RD
Sbjct: 175 VEEARHVFDGVMSDQGEGNEGKRRLKRNVVSWNSMMMCYVKAGDVVSARELFDRMVERDA 234
Query: 171 VSYCSMIQGLSIHGCGEDAVRLFNSMLMEGLVPDEVAFTIILTACSHSGLVDEGWNYFQS 230
S+ ++I G G E+A +LF +E +PD +++ I++ S G + +F++
Sbjct: 235 CSWNTVIGGYVQIGDMEEASKLF----LEMPIPDVLSWNSIISGFSQIGDLKRVKEFFEN 290
Query: 231 MKQKYGIS 238
M K IS
Sbjct: 291 MPHKNLIS 298
Score = 85.5 bits (210), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 70/289 (24%), Positives = 130/289 (44%), Gaps = 53/289 (18%)
Query: 12 MLCGFVKDGDLSSARGVFDAMPEKNVVSFTTMIDGYAKAGD---MAAARFLFEQATEKDV 68
M+ G+V+ +++ AR +FD MP +++VS+ +I GY + R LF+ ++D
Sbjct: 1 MITGYVQRREIAKARQLFDEMPLRDIVSWNLIISGYFSCRGSRFVEEGRKLFDIMPQRDC 60
Query: 69 VAWSALISGYVQNGQPNQALKVFLEMESKNVKPDEFILVSLMSATSQLGHLELAQWVDSY 128
V+W+ +ISGY +NG+ +QA+++F M +NV
Sbjct: 61 VSWNTVISGYAKNGRMDQAIEIFESMPERNV----------------------------- 91
Query: 129 VSKSSIDLQQDHVIAALLDMNAKCGNMDRALKLFKEMPKRDLVSYCSMIQGLSIHGCGED 188
VS +++ V LL+ G++D A+ F++M +RD S ++ GL +G +
Sbjct: 92 VSCNAV------VNGFLLN-----GDVDSAVGFFRKMGERDSASLSGLVSGLVRNGKLDM 140
Query: 189 AVRLFNSMLMEGLVPDEV--AFTIILTACSHSGLVDEGWNYFQSMKQKYG--------IS 238
A + EG D++ A+ ++ G+V+E + F + G +
Sbjct: 141 AAEILVEYGNEGDEKDDLVYAYNTLIAGYGQRGMVEEARHVFDGVMSDQGEGNEGKRRLK 200
Query: 239 PSPDHFACMVDLLSRSGHLGDAYELMKSMHEPHAGAWGALLGACKLHGD 287
+ + M+ ++G + A EL M E A +W ++G GD
Sbjct: 201 RNVVSWNSMMMCYVKAGDVVSARELFDRMVERDACSWNTVIGGYVQIGD 249
>Medtr8g063290.1 | pentatricopeptide (PPR) repeat protein | HC |
chr8:26513420-26510735 | 20130731
Length = 659
Score = 244 bits (622), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 133/382 (34%), Positives = 210/382 (54%), Gaps = 43/382 (11%)
Query: 5 NVASWNAMLCGFVKDGDLSSARGVFDAMPEKNVVSFTTMIDGYA---------------- 48
N+ N ++ + K G L AR VFD M K+VVS+ +M+ GYA
Sbjct: 153 NLFVGNGLIAMYGKCGCLFEARRVFDEMIWKDVVSWNSMVAGYAHNMRFDDALEICREME 212
Query: 49 ---------------------KAGDMAAARFLFEQATEKDVVAWSALISGYVQNGQPNQA 87
+ ++ +F K++++W+ +I Y++N P QA
Sbjct: 213 DYGQKPDGCTMASLMPAVANTSSENVLYVEKIFVNLERKNLISWNVMIRVYMKNSLPTQA 272
Query: 88 LKVFLEMESKNVKPDEFILVSLMSATSQLGHLELAQWVDSYVSKSSI--DLQQDHVIAAL 145
+ ++L+ME V+PD S++ A L L L + + YV K + +L ++ +L
Sbjct: 273 VDLYLQMEKCRVEPDAITFASVLPACGDLSALLLGRRIHEYVEKKKLCPNLLLEN---SL 329
Query: 146 LDMNAKCGNMDRALKLFKEMPKRDLVSYCSMIQGLSIHGCGEDAVRLFNSMLMEGLVPDE 205
+DM A+CG +D A ++F M RD+ S+ S+I + G G +AV LF ML G PD
Sbjct: 330 IDMYARCGCLDDAKRVFDRMKFRDVASWTSLISAYGMTGQGCNAVALFTEMLNSGQAPDS 389
Query: 206 VAFTIILTACSHSGLVDEGWNYFQSMKQKYGISPSPDHFACMVDLLSRSGHLGDAYELMK 265
+AF IL+ACSHSGL+DEG YF+ M Y I+P +H+AC+VDLL R+G + +AY ++K
Sbjct: 390 IAFVAILSACSHSGLLDEGRIYFKQMTDDYRITPRIEHYACLVDLLGRAGRVDEAYNIIK 449
Query: 266 SMH-EPHAGAWGALLGACKLHGDSDLGEIVANQLFELEPQNAANYILLSNIYAAAERWID 324
M EP+ W LL +C++ + D+G + A+ L +L P+ + Y+LLSNIYA A RW +
Sbjct: 450 QMPIEPNERVWATLLSSCRVFTNMDIGILAADNLLQLAPEQSGYYVLLSNIYAKAGRWKE 509
Query: 325 VSLVRSRMRERSVQKIPGCSKL 346
V+ +RS M+ + ++K PG S +
Sbjct: 510 VTEIRSVMKRKKIRKTPGISNV 531
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 75/307 (24%), Positives = 139/307 (45%), Gaps = 23/307 (7%)
Query: 43 MIDGYAKAGDMAAARFLFEQATEKDVVAWSALISGYVQNGQPNQALKVFLEMESKNVKPD 102
++ YA G+ R +F++ ++++VV ++ +I YV N + + L VF EM + +PD
Sbjct: 59 LMRSYAACGEPGLTRKVFDEMSDRNVVFYNVMIRSYVNNHRYDDGLLVFREMVNGGFRPD 118
Query: 103 EFILVSLMSATSQLGHLELAQWVDSYVSKSSIDLQQDHVIAALLDMNAKCGNMDRALKLF 162
+ ++ A S +L + V K +D V L+ M KCG + A ++F
Sbjct: 119 NYTYPCVLKACSCSENLRYGLLIHGDVLKVGLDFNL-FVGNGLIAMYGKCGCLFEARRVF 177
Query: 163 KEMPKRDLVSYCSMIQGLSIHGCGEDAVRLFNSMLMEGLVPDEVAFTIILTACSHSGLVD 222
EM +D+VS+ SM+ G + + +DA+ + M G PD ++ A +++ +
Sbjct: 178 DEMIWKDVVSWNSMVAGYAHNMRFDDALEICREMEDYGQKPDGCTMASLMPAVANTSSEN 237
Query: 223 EGW--NYFQSMKQKYGISPSPDHFACMVDLLSRSGHLGDAYELMKSMH----EPHAGAWG 276
+ F ++++K IS + M+ + ++ A +L M EP A +
Sbjct: 238 VLYVEKIFVNLERKNLIS-----WNVMIRVYMKNSLPTQAVDLYLQMEKCRVEPDAITFA 292
Query: 277 ALLGACKLHGDSDLGEIVANQLFE--LEPQNAANYILLSN----IYAAAERWIDVSLVRS 330
++L AC DL ++ + +E + +LL N +YA D V
Sbjct: 293 SVLPAC-----GDLSALLLGRRIHEYVEKKKLCPNLLLENSLIDMYARCGCLDDAKRVFD 347
Query: 331 RMRERSV 337
RM+ R V
Sbjct: 348 RMKFRDV 354
>Medtr6g018720.1 | PPR containing plant-like protein | HC |
chr6:7213956-7209580 | 20130731
Length = 535
Score = 244 bits (622), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 127/346 (36%), Positives = 207/346 (59%), Gaps = 6/346 (1%)
Query: 4 RNVASWNAMLCGFVKDGDLSSARGVFDAMPEKNVVSFTTMIDGYAKAGDMAAARFLFEQA 63
++V W M+ G+ K G++ AR VF+ MPE+N +++M+ GY K GD+ A +F +
Sbjct: 179 KDVVIWTMMVDGYAKKGEMEDAREVFELMPERNYFVWSSMVCGYCKKGDVMEAEAIFRRI 238
Query: 64 TEKDVVAWSALISGYVQNGQPNQALKVFLEMESKNVKPDEFILVSLMSATSQLGHLELAQ 123
+++ W+++I+GYVQNG +AL+ F EM +PDEF +VS++SA +QLG L+ +
Sbjct: 239 PVRNLEIWNSMIAGYVQNGCGEKALEAFGEMGVDGFEPDEFTVVSVLSACAQLGDLDAGK 298
Query: 124 WVDSYVSKSSIDLQQDHVIAALLDMNAKCGNMDRALKLFKEMPKRDLVSYCSMIQGLSIH 183
+ + I + Q V++ L+DM AKCG++ A +F+ +R++ + +MI G +++
Sbjct: 299 QMHHMIECKGIAVNQ-FVLSGLIDMYAKCGDLVNARLVFESCNERNVFCWNAMIAGFAVN 357
Query: 184 GCGEDAVRLFNSMLMEGLVPDEVAFTIILTACSHSGLVDEGWNYFQSMKQKYGISPSPDH 243
G + + + M + PD V F +L+AC+H GLV E M ++YGI H
Sbjct: 358 GQCNEVLEYLDRMEESNIRPDAVTFITVLSACAHGGLVSEALEVISKM-EEYGIEMGIRH 416
Query: 244 FACMVDLLSRSGHLGDAYELMKSM-HEPHAGAWGALLGACKLHGDSDLGEIVANQLFELE 302
+ CMVDLL R+G L +AYEL+K M +P+ GA++GAC +H D + E V ++ ++
Sbjct: 417 YGCMVDLLGRAGRLKEAYELIKRMPMKPNETVLGAMIGACWIHSDMKMAEQVM-KMIGVD 475
Query: 303 PQNAANY--ILLSNIYAAAERWIDVSLVRSRMRERSVQKIPGCSKL 346
N +LLSNIYAA+E+W ++RS M + +KIPGCS +
Sbjct: 476 SAACVNSHNVLLSNIYAASEKWEKSEMIRSSMVDGGSEKIPGCSSI 521
Score = 120 bits (301), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 81/282 (28%), Positives = 144/282 (51%), Gaps = 12/282 (4%)
Query: 10 NAMLCGFVKDGDLSSARGVFDAMPEKNVVSFTTMIDGYAKAGDMAAARFLFEQATEKDVV 69
A++ + K G + AR VFD M E+N V++ MI GY + GD +A FE+ K V
Sbjct: 90 TAIVAAYAKCGVVCDARKVFDLMHERNDVTWNAMIGGYLRNGDAKSALLAFEEMPGKTRV 149
Query: 70 AWSALISGYVQNGQPNQALKVF--LEMESKNVKPDEFILVSLMSATSQLGHLELAQWVDS 127
+WS +I G+ +NG A K F + E K+V I ++ ++ G +E A+ V
Sbjct: 150 SWSQMIGGFARNGDTLTARKFFDKVPYELKDV----VIWTMMVDGYAKKGEMEDAREVFE 205
Query: 128 YVSKSSIDLQQDHVIAALLDMNAKCGNMDRALKLFKEMPKRDLVSYCSMIQGLSIHGCGE 187
+ + + V ++++ K G++ A +F+ +P R+L + SMI G +GCGE
Sbjct: 206 LMPERNY-----FVWSSMVCGYCKKGDVMEAEAIFRRIPVRNLEIWNSMIAGYVQNGCGE 260
Query: 188 DAVRLFNSMLMEGLVPDEVAFTIILTACSHSGLVDEGWNYFQSMKQKYGISPSPDHFACM 247
A+ F M ++G PDE +L+AC+ G +D G M + GI+ + + +
Sbjct: 261 KALEAFGEMGVDGFEPDEFTVVSVLSACAQLGDLDAG-KQMHHMIECKGIAVNQFVLSGL 319
Query: 248 VDLLSRSGHLGDAYELMKSMHEPHAGAWGALLGACKLHGDSD 289
+D+ ++ G L +A + +S +E + W A++ ++G +
Sbjct: 320 IDMYAKCGDLVNARLVFESCNERNVFCWNAMIAGFAVNGQCN 361
>Medtr3g080230.1 | PPR containing plant-like protein | HC |
chr3:36292375-36290915 | 20130731
Length = 486
Score = 243 bits (621), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 130/346 (37%), Positives = 208/346 (60%), Gaps = 6/346 (1%)
Query: 4 RNVASWNAMLCGFVKDGDLSSARGVF-DAMP---EKNVVSFTTMIDGYAKAGDMAAARFL 59
R++ NA++ + G SAR VF DA+ + ++VS++ ++ +AKAG++ AR +
Sbjct: 138 RHLHVQNALIHLYAVGGVTISARKVFEDAVRVGLDVDIVSWSGLLVAHAKAGELDVARKV 197
Query: 60 FEQATEKDVVAWSALISGYVQNGQPNQALKVFLEMESKNVKPDEFILVSLMSATSQLGHL 119
F+ E+DVV+W+ ++S Y + +P++ L +F EM V PDE ++S++SA ++LG
Sbjct: 198 FDGMPERDVVSWTIMLSAYSKAKRPHETLDLFQEMRLAGVWPDEVTVLSVISACAELGDA 257
Query: 120 ELAQWVDSYVSKSSIDLQQDHVIAALLDMNAKCGNMDRALKLFKEMPKRDLVSYCSMIQG 179
E+ + V +V ++ + +L+DM KCG ++ A ++F ++ L+++ +M+
Sbjct: 258 EMGRMVHKFVEENGFGWMVA-LCNSLIDMYGKCGCLEEAWQVFDRTKRKSLITWNAMMMV 316
Query: 180 LSIHGCGEDAVRLFNSMLMEGLVPDEVAFTIILTACSHSGLVDEGWNYFQSMKQKYGISP 239
+ HG EDA RLF M+ G+VPD V +L A +H G VDEG F+SM++ YG+ P
Sbjct: 317 CANHGYAEDAFRLFEGMIGSGVVPDGVTILALLVAYAHKGFVDEGIRLFESMQRDYGVEP 376
Query: 240 SPDHFACMVDLLSRSGHLGDAYELMKSMHEPHAGA-WGALLGACKLHGDSDLGEIVANQL 298
+H+ +VD+L RSG L +AY L+ SM P WGALLGAC++HGD +GE V +L
Sbjct: 377 RIEHYGAVVDMLGRSGRLQEAYNLLTSMPIPSNDVIWGALLGACRIHGDVGMGERVIKKL 436
Query: 299 FELEPQNAANYILLSNIYAAAERWIDVSLVRSRMRERSVQKIPGCS 344
EL+P YILL +IY AA R + + +R M +K PGCS
Sbjct: 437 LELKPDEGGYYILLRDIYVAAGRTAEANEMRQAMLASGARKNPGCS 482
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 63/282 (22%), Positives = 116/282 (41%), Gaps = 37/282 (13%)
Query: 51 GDMAAARFLFEQATEKDVVAWSALISGYVQNGQPNQALKVFLEMESKNVKPDEFILVSLM 110
GD++ A +F+Q + ++ LI + + P+ + F M ++ PDEF L+
Sbjct: 55 GDLSYAHNMFDQMPQPTTFFYNTLIRAHSHSTTPSFSSLFFNRMRRNSIAPDEFSFTFLL 114
Query: 111 SATS--------------QLG---HLELAQWVDSYVSKSSIDLQQDHVI----------- 142
+ S + G HL + + + + + V
Sbjct: 115 KSRSFTMPLVHDIHGAVFKFGFCRHLHVQNALIHLYAVGGVTISARKVFEDAVRVGLDVD 174
Query: 143 ----AALLDMNAKCGNMDRALKLFKEMPKRDLVSYCSMIQGLSIHGCGEDAVRLFNSMLM 198
+ LL +AK G +D A K+F MP+RD+VS+ M+ S + + LF M +
Sbjct: 175 IVSWSGLLVAHAKAGELDVARKVFDGMPERDVVSWTIMLSAYSKAKRPHETLDLFQEMRL 234
Query: 199 EGLVPDEVAFTIILTACSHSGLVDEGWNYFQSMKQKYGISPSPDHFACMVDLLSRSGHLG 258
G+ PDEV +++AC+ G + G ++ G ++D+ + G L
Sbjct: 235 AGVWPDEVTVLSVISACAELGDAEMG-RMVHKFVEENGFGWMVALCNSLIDMYGKCGCLE 293
Query: 259 DAYELMKSMHEPHAGAWGALLGACKLHGDSDLGEIVANQLFE 300
+A+++ W A++ C HG ++ A +LFE
Sbjct: 294 EAWQVFDRTKRKSLITWNAMMMVCANHGYAE----DAFRLFE 331
>Medtr3g080230.2 | PPR containing plant-like protein | HC |
chr3:36292375-36290915 | 20130731
Length = 486
Score = 243 bits (621), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 130/346 (37%), Positives = 208/346 (60%), Gaps = 6/346 (1%)
Query: 4 RNVASWNAMLCGFVKDGDLSSARGVF-DAMP---EKNVVSFTTMIDGYAKAGDMAAARFL 59
R++ NA++ + G SAR VF DA+ + ++VS++ ++ +AKAG++ AR +
Sbjct: 138 RHLHVQNALIHLYAVGGVTISARKVFEDAVRVGLDVDIVSWSGLLVAHAKAGELDVARKV 197
Query: 60 FEQATEKDVVAWSALISGYVQNGQPNQALKVFLEMESKNVKPDEFILVSLMSATSQLGHL 119
F+ E+DVV+W+ ++S Y + +P++ L +F EM V PDE ++S++SA ++LG
Sbjct: 198 FDGMPERDVVSWTIMLSAYSKAKRPHETLDLFQEMRLAGVWPDEVTVLSVISACAELGDA 257
Query: 120 ELAQWVDSYVSKSSIDLQQDHVIAALLDMNAKCGNMDRALKLFKEMPKRDLVSYCSMIQG 179
E+ + V +V ++ + +L+DM KCG ++ A ++F ++ L+++ +M+
Sbjct: 258 EMGRMVHKFVEENGFGWMVA-LCNSLIDMYGKCGCLEEAWQVFDRTKRKSLITWNAMMMV 316
Query: 180 LSIHGCGEDAVRLFNSMLMEGLVPDEVAFTIILTACSHSGLVDEGWNYFQSMKQKYGISP 239
+ HG EDA RLF M+ G+VPD V +L A +H G VDEG F+SM++ YG+ P
Sbjct: 317 CANHGYAEDAFRLFEGMIGSGVVPDGVTILALLVAYAHKGFVDEGIRLFESMQRDYGVEP 376
Query: 240 SPDHFACMVDLLSRSGHLGDAYELMKSMHEPHAGA-WGALLGACKLHGDSDLGEIVANQL 298
+H+ +VD+L RSG L +AY L+ SM P WGALLGAC++HGD +GE V +L
Sbjct: 377 RIEHYGAVVDMLGRSGRLQEAYNLLTSMPIPSNDVIWGALLGACRIHGDVGMGERVIKKL 436
Query: 299 FELEPQNAANYILLSNIYAAAERWIDVSLVRSRMRERSVQKIPGCS 344
EL+P YILL +IY AA R + + +R M +K PGCS
Sbjct: 437 LELKPDEGGYYILLRDIYVAAGRTAEANEMRQAMLASGARKNPGCS 482
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 63/282 (22%), Positives = 116/282 (41%), Gaps = 37/282 (13%)
Query: 51 GDMAAARFLFEQATEKDVVAWSALISGYVQNGQPNQALKVFLEMESKNVKPDEFILVSLM 110
GD++ A +F+Q + ++ LI + + P+ + F M ++ PDEF L+
Sbjct: 55 GDLSYAHNMFDQMPQPTTFFYNTLIRAHSHSTTPSFSSLFFNRMRRNSIAPDEFSFTFLL 114
Query: 111 SATS--------------QLG---HLELAQWVDSYVSKSSIDLQQDHVI----------- 142
+ S + G HL + + + + + V
Sbjct: 115 KSRSFTMPLVHDIHGAVFKFGFCRHLHVQNALIHLYAVGGVTISARKVFEDAVRVGLDVD 174
Query: 143 ----AALLDMNAKCGNMDRALKLFKEMPKRDLVSYCSMIQGLSIHGCGEDAVRLFNSMLM 198
+ LL +AK G +D A K+F MP+RD+VS+ M+ S + + LF M +
Sbjct: 175 IVSWSGLLVAHAKAGELDVARKVFDGMPERDVVSWTIMLSAYSKAKRPHETLDLFQEMRL 234
Query: 199 EGLVPDEVAFTIILTACSHSGLVDEGWNYFQSMKQKYGISPSPDHFACMVDLLSRSGHLG 258
G+ PDEV +++AC+ G + G ++ G ++D+ + G L
Sbjct: 235 AGVWPDEVTVLSVISACAELGDAEMG-RMVHKFVEENGFGWMVALCNSLIDMYGKCGCLE 293
Query: 259 DAYELMKSMHEPHAGAWGALLGACKLHGDSDLGEIVANQLFE 300
+A+++ W A++ C HG ++ A +LFE
Sbjct: 294 EAWQVFDRTKRKSLITWNAMMMVCANHGYAE----DAFRLFE 331
>Medtr4g032895.1 | pentatricopeptide (PPR) repeat protein | HC |
chr4:11375774-11372564 | 20130731
Length = 938
Score = 243 bits (620), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 126/307 (41%), Positives = 188/307 (61%), Gaps = 4/307 (1%)
Query: 41 TTMIDGYAKAGDMAAARFLFEQATE-KDVVAWSALISGYVQNGQPNQALKVFLEMESKNV 99
T+++ Y + +A LF + + K +V W+ALISG+ QN +QAL ++ EM N+
Sbjct: 584 TSLLGMYMDSQKLAEGNILFSELSNLKSIVLWTALISGHTQNDCSDQALNLYREMRDNNI 643
Query: 100 KPDEFILVSLMSATSQLGHLELAQWVDSYVSKSSIDLQQDHVIAALLDMNAKCGNMDRAL 159
PD+ V+++ A + L L+ Q + S + + DL + +AL+DM AKCG++ A
Sbjct: 644 LPDQATFVTVLRACALLSSLQDGQEIHSLIFHTGFDLDE-LTSSALVDMYAKCGDVKSAA 702
Query: 160 KLFKEMP-KRDLVSYCSMIQGLSIHGCGEDAVRLFNSMLMEGLVPDEVAFTIILTACSHS 218
K+F+E+P K+D++S+ SMI G + +G E A+++F+ M + + PD+V F +LTACSH+
Sbjct: 703 KVFEELPIKKDVISWNSMIVGFAKNGYAERALKVFDEMTLSSVSPDDVTFLGVLTACSHA 762
Query: 219 GLVDEGWNYFQSMKQKYGISPSPDHFACMVDLLSRSGHLGDAYELMKSMH-EPHAGAWGA 277
GLV EG F +M Y I P DH ACMVDLL R G L +A E + + EP+A W
Sbjct: 763 GLVSEGRQIFDNMVNYYSIHPRVDHHACMVDLLGRCGFLEEAEEFIDKLDVEPNAMIWAN 822
Query: 278 LLGACKLHGDSDLGEIVANQLFELEPQNAANYILLSNIYAAAERWIDVSLVRSRMRERSV 337
LLGAC +HGD G A +L ELEPQN++ Y+LL N++A + W + +R M + V
Sbjct: 823 LLGACSIHGDEKRGLRAAEKLIELEPQNSSPYVLLYNMHAGSGHWDEAKSLRRTMVQNEV 882
Query: 338 QKIPGCS 344
QK PGCS
Sbjct: 883 QKTPGCS 889
Score = 102 bits (255), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 68/248 (27%), Positives = 125/248 (50%), Gaps = 2/248 (0%)
Query: 34 EKNVVSFTTMIDGYAKAGDMAAARFLFEQATEKDVVAWSALISGYVQNGQPNQALKVFLE 93
E +V +++I+ Y K + A+ +F+ +++VV W+ ++ Y QNG + +++F E
Sbjct: 274 ESSVYVASSLINMYGKCEMLCDAKKVFDVVCDRNVVMWNTILGVYAQNGCLSDVMELFSE 333
Query: 94 MESKNVKPDEFILVSLMSATSQLGHLELAQWVDSYVSKSSIDLQQDHVIAALLDMNAKCG 153
M PDEF S++S+ + L++ + + S + K V AL+DM AK G
Sbjct: 334 MMGCGNDPDEFTYSSILSSCACFDFLDIGRQLHSTIIKKRFT-DNLCVNNALVDMYAKAG 392
Query: 154 NMDRALKLFKEMPKRDLVSYCSMIQGLSIHGCGEDAVRLFNSMLMEGLVPDEVAFTIILT 213
+ A K F+ M RD +S+ +++ G +A +F M G+VPDEV IL+
Sbjct: 393 ALKEARKQFERMKYRDNISWNAILVGYVQEEEETEAFNMFRRMNRHGVVPDEVCMASILS 452
Query: 214 ACSHSGLVDEGWNYFQSMKQKYGISPSPDHFACMVDLLSRSGHLGDAYELMKSMHEPHAG 273
AC + +++ G F + K G+ + + ++D+ S+ G + DA ++ M E
Sbjct: 453 ACGNIKVLEAGLQ-FHGLSVKLGLDTNLFAGSSLIDMYSKCGGIEDARKIYSCMPEWSVV 511
Query: 274 AWGALLGA 281
+ AL+
Sbjct: 512 SMNALIAG 519
Score = 101 bits (252), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 70/254 (27%), Positives = 115/254 (45%), Gaps = 41/254 (16%)
Query: 4 RNVASWNAMLCGFVKDGDLSSARGVFDAM------PEK---------------------- 35
RNV WN +L + ++G LS +F M P++
Sbjct: 306 RNVVMWNTILGVYAQNGCLSDVMELFSEMMGCGNDPDEFTYSSILSSCACFDFLDIGRQL 365
Query: 36 -----------NVVSFTTMIDGYAKAGDMAAARFLFEQATEKDVVAWSALISGYVQNGQP 84
N+ ++D YAKAG + AR FE+ +D ++W+A++ GYVQ +
Sbjct: 366 HSTIIKKRFTDNLCVNNALVDMYAKAGALKEARKQFERMKYRDNISWNAILVGYVQEEEE 425
Query: 85 NQALKVFLEMESKNVKPDEFILVSLMSATSQLGHLELAQWVDSYVSKSSIDLQQDHVIAA 144
+A +F M V PDE + S++SA + LE K +D ++
Sbjct: 426 TEAFNMFRRMNRHGVVPDEVCMASILSACGNIKVLEAGLQFHGLSVKLGLDTNL-FAGSS 484
Query: 145 LLDMNAKCGNMDRALKLFKEMPKRDLVSYCSMIQGLSIHGCGEDAVRLFNSMLMEGLVPD 204
L+DM +KCG ++ A K++ MP+ +VS ++I G +I E A+ L + M + GL P
Sbjct: 485 LIDMYSKCGGIEDARKIYSCMPEWSVVSMNALIAGYAIKDTKE-AINLLHEMQILGLKPS 543
Query: 205 EVAFTIILTACSHS 218
E+ F ++ C S
Sbjct: 544 EITFASLIDCCKES 557
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 70/280 (25%), Positives = 142/280 (50%), Gaps = 8/280 (2%)
Query: 5 NVASWNAMLCGFVKDGDLSSARGVFDAMPEKNVVS---FTTMIDGYAKAGDMAAARFLFE 61
+ A++ A++ G+V+ G A +FD M V+ T+++ G + A LF+
Sbjct: 140 DTATFTALIGGYVRVGMFDDALQLFDEMQSGFVLDELVIVTVLNACVNLGKLDHACELFD 199
Query: 62 QATE-KDVVAWSALISGYVQNGQPNQALKVFLEMESKNVKPDEFILVSLMSATSQLGHLE 120
+ +VVAW+ +ISG+ + G +A++ + +M V L S++SA + LG L
Sbjct: 200 EMDGCGNVVAWNVMISGHGKRGYHKEAVEFYRKMRMNGVISSRSTLASVLSAVAGLGDLG 259
Query: 121 LAQWVDSYVSKSSIDLQQDHVIAALLDMNAKCGNMDRALKLFKEMPKRDLVSYCSMIQGL 180
V K + +V ++L++M KC + A K+F + R++V + +++
Sbjct: 260 CGLLVHGEAVKLGFE-SSVYVASSLINMYGKCEMLCDAKKVFDVVCDRNVVMWNTILGVY 318
Query: 181 SIHGCGEDAVRLFNSMLMEGLVPDEVAFTIILTACSHSGLVDEGWNYFQS-MKQKYGISP 239
+ +GC D + LF+ M+ G PDE ++ IL++C+ +D G + +K+++ +
Sbjct: 319 AQNGCLSDVMELFSEMMGCGNDPDEFTYSSILSSCACFDFLDIGRQLHSTIIKKRFTDNL 378
Query: 240 SPDHFACMVDLLSRSGHLGDAYELMKSMHEPHAGAWGALL 279
++ +VD+ +++G L +A + + M +W A+L
Sbjct: 379 CVNN--ALVDMYAKAGALKEARKQFERMKYRDNISWNAIL 416
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 64/307 (20%), Positives = 130/307 (42%), Gaps = 42/307 (13%)
Query: 1 MPQRNVASWNAMLCGFVKDGDLSSARGVFDAMP--------------------------- 33
M R+ SWNA+L G+V++ + + A +F M
Sbjct: 404 MKYRDNISWNAILVGYVQEEEETEAFNMFRRMNRHGVVPDEVCMASILSACGNIKVLEAG 463
Query: 34 ------------EKNVVSFTTMIDGYAKAGDMAAARFLFEQATEKDVVAWSALISGYVQN 81
+ N+ + +++ID Y+K G + AR ++ E VV+ +ALI+GY
Sbjct: 464 LQFHGLSVKLGLDTNLFAGSSLIDMYSKCGGIEDARKIYSCMPEWSVVSMNALIAGYAIK 523
Query: 82 GQPNQALKVFLEMESKNVKPDEFILVSLMSATSQLGHLELAQWVDSYVSKSSIDLQQDHV 141
+A+ + EM+ +KP E SL+ + + L + + K+ + + +
Sbjct: 524 -DTKEAINLLHEMQILGLKPSEITFASLIDCCKESPKVILGMQIHCAILKNGLLCGSEFL 582
Query: 142 IAALLDMNAKCGNMDRALKLFKEMPK-RDLVSYCSMIQGLSIHGCGEDAVRLFNSMLMEG 200
+LL M + LF E+ + +V + ++I G + + C + A+ L+ M
Sbjct: 583 GTSLLGMYMDSQKLAEGNILFSELSNLKSIVLWTALISGHTQNDCSDQALNLYREMRDNN 642
Query: 201 LVPDEVAFTIILTACSHSGLVDEGWNYFQSMKQKYGISPSPDHFACMVDLLSRSGHLGDA 260
++PD+ F +L AC+ + +G S+ G + +VD+ ++ G + A
Sbjct: 643 ILPDQATFVTVLRACALLSSLQDGQE-IHSLIFHTGFDLDELTSSALVDMYAKCGDVKSA 701
Query: 261 YELMKSM 267
++ + +
Sbjct: 702 AKVFEEL 708
>Medtr2g036960.1 | PPR containing plant-like protein | HC |
chr2:16044626-16048085 | 20130731
Length = 702
Score = 243 bits (620), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 133/388 (34%), Positives = 218/388 (56%), Gaps = 46/388 (11%)
Query: 1 MPQRNVASWNAMLCGFVKDGDLSSARGVFDAMPEKN------------------------ 36
+ ++++ SWN++L G+ K G A VF + E++
Sbjct: 178 ITEKDLVSWNSLLSGYAKLGFAREAVEVFGRLREESGFEPDEMSLVSVLGACGELGDLEL 237
Query: 37 --------------VVSF--TTMIDGYAKAGDMAAARFLFEQATEKDVVAWSALISGYVQ 80
V S+ + +I Y+K G++ ++R +F+ +D + W+A IS Y Q
Sbjct: 238 GRWVEGFVVERGMKVNSYIGSALISMYSKCGELVSSRRIFDGMPSRDFITWNAAISAYAQ 297
Query: 81 NGQPNQALKVFLEMESKNVKPDEFILVSLMSATSQLGHLELAQWVDSYVSKSSIDLQQDH 140
NG ++A+ +F M+ V P++ L +++SA + +G L+L + +D Y + LQ D
Sbjct: 298 NGMADEAISLFHSMKENGVDPNKVTLTAVLSACASIGALDLGKQMDEYATHRG--LQHDI 355
Query: 141 VIA-ALLDMNAKCGNMDRALKLFKEMPKRDLVSYCSMIQGLSIHGCGEDAVRLFNSMLME 199
+A AL+DM AKCG+++ A ++F +MP+++ S+ +MI L+ HG ++A+ LF M E
Sbjct: 356 FVATALIDMYAKCGSLESAQRVFNDMPRKNDASWNAMISALASHGKAKEALSLFERMSDE 415
Query: 200 G--LVPDEVAFTIILTACSHSGLVDEGWNYFQSMKQKYGISPSPDHFACMVDLLSRSGHL 257
G P+++ F +L+AC H+GLVDEG+ F M +G+ P +H++CMVDLLSR+GHL
Sbjct: 416 GGSARPNDITFVSLLSACVHAGLVDEGYRLFDMMSTLFGLVPKIEHYSCMVDLLSRAGHL 475
Query: 258 GDAYELMKSMHE-PHAGAWGALLGACKLHGDSDLGEIVANQLFELEPQNAANYILLSNIY 316
+A+++++ M E P GAL AC+ + D+GE V L EL+P N+ NYI+ S IY
Sbjct: 476 YEAWDVIEKMPEKPDNVTLGALHSACQRKKNVDIGERVIQMLLELDPSNSGNYIISSKIY 535
Query: 317 AAAERWIDVSLVRSRMRERSVQKIPGCS 344
W D + +R+ MRE V K PGCS
Sbjct: 536 ENLNMWDDAARMRALMRENGVTKTPGCS 563
Score = 142 bits (359), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 75/251 (29%), Positives = 143/251 (56%), Gaps = 3/251 (1%)
Query: 39 SFTTMIDGYAKAGDMAAARFLFEQATEKDVVAWSALISGYVQNGQPNQALKVFLEM-ESK 97
+ +M+ Y + G+ AR +F++ TEKD+V+W++L+SGY + G +A++VF + E
Sbjct: 154 TVNSMVTMYFRCGENGVARKVFDEITEKDLVSWNSLLSGYAKLGFAREAVEVFGRLREES 213
Query: 98 NVKPDEFILVSLMSATSQLGHLELAQWVDSYVSKSSIDLQQDHVIAALLDMNAKCGNMDR 157
+PDE LVS++ A +LG LEL +WV+ +V + + + ++ +AL+ M +KCG +
Sbjct: 214 GFEPDEMSLVSVLGACGELGDLELGRWVEGFVVERGMKVNS-YIGSALISMYSKCGELVS 272
Query: 158 ALKLFKEMPKRDLVSYCSMIQGLSIHGCGEDAVRLFNSMLMEGLVPDEVAFTIILTACSH 217
+ ++F MP RD +++ + I + +G ++A+ LF+SM G+ P++V T +L+AC+
Sbjct: 273 SRRIFDGMPSRDFITWNAAISAYAQNGMADEAISLFHSMKENGVDPNKVTLTAVLSACAS 332
Query: 218 SGLVDEGWNYFQSMKQKYGISPSPDHFACMVDLLSRSGHLGDAYELMKSMHEPHAGAWGA 277
G +D G + + G+ ++D+ ++ G L A + M + +W A
Sbjct: 333 IGALDLGKQMDEYATHR-GLQHDIFVATALIDMYAKCGSLESAQRVFNDMPRKNDASWNA 391
Query: 278 LLGACKLHGDS 288
++ A HG +
Sbjct: 392 MISALASHGKA 402
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 49/204 (24%), Positives = 98/204 (48%), Gaps = 3/204 (1%)
Query: 87 ALKVFLEMESKNVKPDEFILVSLMSATSQLGHLELAQWVDSYVSKSSIDLQQDHVIAALL 146
L ++ +M++ N+ P+ F + A + L + +A+ V K +D H + +++
Sbjct: 101 TLHLYHQMKTLNISPNNFTFPFVFLACANLEEIRMARLAHCEVFKLGLD-NDHHTVNSMV 159
Query: 147 DMNAKCGNMDRALKLFKEMPKRDLVSYCSMIQGLSIHGCGEDAVRLFNSMLME-GLVPDE 205
M +CG A K+F E+ ++DLVS+ S++ G + G +AV +F + E G PDE
Sbjct: 160 TMYFRCGENGVARKVFDEITEKDLVSWNSLLSGYAKLGFAREAVEVFGRLREESGFEPDE 219
Query: 206 VAFTIILTACSHSGLVDEGWNYFQSMKQKYGISPSPDHFACMVDLLSRSGHLGDAYELMK 265
++ +L AC G ++ G + + + G+ + + ++ + S+ G L + +
Sbjct: 220 MSLVSVLGACGELGDLELG-RWVEGFVVERGMKVNSYIGSALISMYSKCGELVSSRRIFD 278
Query: 266 SMHEPHAGAWGALLGACKLHGDSD 289
M W A + A +G +D
Sbjct: 279 GMPSRDFITWNAAISAYAQNGMAD 302
>Medtr5g091640.1 | PPR containing plant-like protein | HC |
chr5:39962522-39960655 | 20130731
Length = 542
Score = 243 bits (620), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 123/343 (35%), Positives = 216/343 (62%), Gaps = 7/343 (2%)
Query: 10 NAMLCGFVKDGDLSSARGVFDA----MPEKNVVSFTTMIDGYAKAGDMAAARFLFEQATE 65
N ++ + G +S AR VFD + + +VV+ +MI GYAK G++ +R LF+
Sbjct: 166 NTIIYMYANGGLMSEARRVFDGKKLELYDHDVVAINSMIMGYAKCGEIDESRNLFDDMIT 225
Query: 66 KDVVAWSALISGYVQNGQPNQALKVFLEMESKNVKPDEFILVSLMSATSQLGHLELAQWV 125
+ V+W+++ISGYV+NG+ +AL++F +M+ + + EF +VSL++A + LG L+ +WV
Sbjct: 226 RTSVSWNSMISGYVRNGKLMEALELFNKMQVEGFEVSEFTMVSLLNACAHLGALQHGKWV 285
Query: 126 DSYVSKSSIDLQQDHVIAALLDMNAKCGNMDRALKLFKEMPKRDLVSYCSMIQGLSIHGC 185
Y+ ++ +L V+ A++DM KCG+++ A+++F+ P+R L + S+I GL+++G
Sbjct: 286 HDYIKRNHFELNVI-VVTAIIDMYCKCGSVENAVEVFETCPRRGLSCWNSIIIGLAMNGH 344
Query: 186 GEDAVRLFNSMLMEGLV-PDEVAFTIILTACSHSGLVDEGWNYFQSMKQKYGISPSPDHF 244
+A F+ + L+ PD V+F +LTAC H G +++ +YF+ M KY I PS H+
Sbjct: 345 EREAFEFFSKLESSKLLKPDSVSFIGVLTACKHLGAINKARDYFELMMNKYEIEPSIKHY 404
Query: 245 ACMVDLLSRSGHLGDAYELMKSMH-EPHAGAWGALLGACKLHGDSDLGEIVANQLFELEP 303
C+VD+L ++G L +A EL+K M +P A WG+LL +C+ H + + A +++EL P
Sbjct: 405 TCIVDVLGQAGLLEEAEELIKGMPLKPDAIIWGSLLSSCRKHRNVQIARRAAQRVYELNP 464
Query: 304 QNAANYILLSNIYAAAERWIDVSLVRSRMRERSVQKIPGCSKL 346
+A+ Y+L+SN++AA+ ++ + R M+E +K PGCS +
Sbjct: 465 SDASGYVLMSNVHAASNKFEEAIEQRLLMKENLTEKEPGCSSI 507
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 68/295 (23%), Positives = 131/295 (44%), Gaps = 26/295 (8%)
Query: 6 VASWNAMLCGFVKDGDLSSARGVFDAMPEKNVVSFTTMIDGYAKAGDMAAARFLF----E 61
+AS A+ G+++ A +F MP N+ S+ T+I ++++ A LF
Sbjct: 61 IASTRALTFCASPSGNINYAYKLFVRMPNPNLYSWNTIIRAFSRSSTPQFAISLFVDMLY 120
Query: 62 QATEKDVVAWSALISGYVQNGQPNQALKVFLEMESKNVKPDEFILVSLMSATSQLGHLEL 121
+ + + ++ Y Q G + ++ + ++ D+FI +++ + G +
Sbjct: 121 SQIQPQYLTYPSVFKAYAQLGHAHYGAQLHGRVVKLGLQNDQFICNTIIYMYANGGLMSE 180
Query: 122 AQWVDSYVSKSSIDLQQDHVIAALLDM---NAKCGNMDRALKLFKEMPKRDLVSYCSMIQ 178
A+ V ++L DH + A+ M AKCG +D + LF +M R VS+ SMI
Sbjct: 181 ARRV---FDGKKLEL-YDHDVVAINSMIMGYAKCGEIDESRNLFDDMITRTSVSWNSMIS 236
Query: 179 GLSIHGCGEDAVRLFNSMLMEGLVPDEVAFTIILTACSHSGLVDEGWNYFQSMKQKYGIS 238
G +G +A+ LFN M +EG E +L AC+H G + G +K+
Sbjct: 237 GYVRNGKLMEALELFNKMQVEGFEVSEFTMVSLLNACAHLGALQHGKWVHDYIKR----- 291
Query: 239 PSPDHF-------ACMVDLLSRSGHLGDAYELMKSMHEPHAGAWGALLGACKLHG 286
+HF ++D+ + G + +A E+ ++ W +++ ++G
Sbjct: 292 ---NHFELNVIVVTAIIDMYCKCGSVENAVEVFETCPRRGLSCWNSIIIGLAMNG 343
>Medtr4g131300.1 | PPR containing plant-like protein | HC |
chr4:54775340-54772788 | 20130731
Length = 734
Score = 243 bits (619), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 139/381 (36%), Positives = 207/381 (54%), Gaps = 41/381 (10%)
Query: 4 RNVASWNAMLCGFVKDGDLSSARGVFDAMPEKNVV------------------------- 38
+N +W+AM+ G+ + GD A +F+ M V+
Sbjct: 283 KNSITWSAMVTGYAQGGDSDKALKLFNKMHSSGVLPSEFTLVGVINACSDLCAVVEGKQM 342
Query: 39 -SF-------------TTMIDGYAKAGDMAAARFLFEQATEKDVVAWSALISGYVQNGQP 84
SF + ++D YAK G +A AR FE + DVV W+++I+GYVQNG
Sbjct: 343 HSFAFKLGFGLQLYVLSAVVDMYAKCGSLADARKGFECVQQPDVVLWTSIITGYVQNGDY 402
Query: 85 NQALKVFLEMESKNVKPDEFILVSLMSATSQLGHLELAQWVDSYVSKSSIDLQQDHVIAA 144
L ++ +M+ + V P+E + S++ A S L L+ + + + + K L+ + +A
Sbjct: 403 EGGLNLYGKMQMERVIPNELTMASVLRACSSLAALDQGKQMHARIIKYGFKLEVP-IGSA 461
Query: 145 LLDMNAKCGNMDRALKLFKEMPKRDLVSYCSMIQGLSIHGCGEDAVRLFNSMLMEGLVPD 204
L M KCG++D +F MP RD++S+ +MI GLS +G G A+ LF ML+EG+ PD
Sbjct: 462 LSAMYTKCGSLDDGYLIFWRMPSRDVISWNAMISGLSQNGHGNKALELFEKMLLEGIKPD 521
Query: 205 EVAFTIILTACSHSGLVDEGWNYFQSMKQKYGISPSPDHFACMVDLLSRSGHLGDAYELM 264
V F +L+ACSH GLVD GW YF+ M ++ I+P +H+ACMVD+LSR+G L +A E +
Sbjct: 522 PVTFVNLLSACSHMGLVDRGWEYFKMMFDEFNIAPMVEHYACMVDILSRAGKLNEAKEFI 581
Query: 265 KSMHEPHA-GAWGALLGACKLHGDSDLGEIVANQLFELEPQNAANYILLSNIYAAAERWI 323
+S H W LLGACK H + +LG +L EL ++ Y+LLS+IY A
Sbjct: 582 ESATVDHGLCLWRILLGACKNHRNYELGVYAGEKLVELGSPESSAYVLLSSIYTALGDRE 641
Query: 324 DVSLVRSRMRERSVQKIPGCS 344
+V VR M+ R V K PGCS
Sbjct: 642 NVERVRRIMKARGVNKEPGCS 662
Score = 127 bits (320), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 93/339 (27%), Positives = 157/339 (46%), Gaps = 45/339 (13%)
Query: 1 MPQRNVASWNAMLCGFVKDGDLSSARGVFDAMPE----KNVVSFTTMIDG---------- 46
MP+RN SW M+ G+ A VF+ M +N + T+++
Sbjct: 179 MPERNTVSWATMISGYASSDIADKAVEVFELMRREEEIQNEFALTSVLSALTSDVFVYTG 238
Query: 47 -------------------------YAKAGDMAAARFLFEQATEKDVVAWSALISGYVQN 81
YAK G + A FE + +K+ + WSA+++GY Q
Sbjct: 239 RQVHSLAIKNGLLAIVSVANALVTMYAKCGSLDDAVRTFEFSGDKNSITWSAMVTGYAQG 298
Query: 82 GQPNQALKVFLEMESKNVKPDEFILVSLMSATSQLGHLELAQWVDSYVSKSSIDLQQDHV 141
G ++ALK+F +M S V P EF LV +++A S L + + + S+ K LQ +V
Sbjct: 299 GDSDKALKLFNKMHSSGVLPSEFTLVGVINACSDLCAVVEGKQMHSFAFKLGFGLQL-YV 357
Query: 142 IAALLDMNAKCGNMDRALKLFKEMPKRDLVSYCSMIQGLSIHGCGEDAVRLFNSMLMEGL 201
++A++DM AKCG++ A K F+ + + D+V + S+I G +G E + L+ M ME +
Sbjct: 358 LSAVVDMYAKCGSLADARKGFECVQQPDVVLWTSIITGYVQNGDYEGGLNLYGKMQMERV 417
Query: 202 VPDEVAFTIILTACSHSGLVDEGWNYFQSMKQKYGISPSPDHFACMVDLLSRSGHLGDAY 261
+P+E+ +L ACS +D+G + KYG + + + ++ G L D Y
Sbjct: 418 IPNELTMASVLRACSSLAALDQG-KQMHARIIKYGFKLEVPIGSALSAMYTKCGSLDDGY 476
Query: 262 ELMKSMHEPHAGAWGALLGACKLHGDSDLGEIVANQLFE 300
+ M +W A++ +G + A +LFE
Sbjct: 477 LIFWRMPSRDVISWNAMISGLSQNGHGN----KALELFE 511
Score = 112 bits (279), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 72/268 (26%), Positives = 137/268 (51%), Gaps = 12/268 (4%)
Query: 41 TTMIDGYAKAGDMAAARFLFEQATEKDVVAWSALISGYVQNGQPNQALKVFLEMESKNVK 100
+++++ Y K G + AR LF++ E++ V+W+ +ISGY + ++A++VF M +
Sbjct: 157 SSLLNMYCKTGFVFDARKLFDRMPERNTVSWATMISGYASSDIADKAVEVFELMRREEEI 216
Query: 101 PDEFILVSLMSATSQLGHLELAQWVDSYVSKSSIDLQQDHVIAALLDMNAKCGNMDRALK 160
+EF L S++SA + + + V S K+ + L V AL+ M AKCG++D A++
Sbjct: 217 QNEFALTSVLSALTSDVFVYTGRQVHSLAIKNGL-LAIVSVANALVTMYAKCGSLDDAVR 275
Query: 161 LFKEMPKRDLVSYCSMIQGLSIHGCGEDAVRLFNSMLMEGLVPDEVAFTIILTACSHSGL 220
F+ ++ +++ +M+ G + G + A++LFN M G++P E ++ ACS
Sbjct: 276 TFEFSGDKNSITWSAMVTGYAQGGDSDKALKLFNKMHSSGVLPSEFTLVGVINACSDLCA 335
Query: 221 VDEGWNYFQSMKQKYGISPSPDHFACMVDLLSRSGHLGDAYELMKSMHEPHAGAWGALL- 279
V EG S K G + +VD+ ++ G L DA + + + +P W +++
Sbjct: 336 VVEG-KQMHSFAFKLGFGLQLYVLSAVVDMYAKCGSLADARKGFECVQQPDVVLWTSIIT 394
Query: 280 ---------GACKLHGDSDLGEIVANQL 298
G L+G + ++ N+L
Sbjct: 395 GYVQNGDYEGGLNLYGKMQMERVIPNEL 422
Score = 88.6 bits (218), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 72/255 (28%), Positives = 121/255 (47%), Gaps = 8/255 (3%)
Query: 41 TTMIDGYAKAGDMAAARFLFEQATE--KDVVAWSALISGYVQNGQPNQ---ALKVFLEM- 94
T ++ YAK ++ A LF+ + KD V+W++LI+ + QN + A+ +F M
Sbjct: 50 NTFLNLYAKTNHLSHALTLFDSINDNDKDDVSWNSLINAFSQNHSSSSSSFAISLFRRMM 109
Query: 95 ESKNVKPDEFILVSLMSATSQLGHLELAQWVDSYVSKSSIDLQQDHVIAALLDMNAKCGN 154
+ NV P+ L + SA S L + + S K+ +V ++LL+M K G
Sbjct: 110 RANNVIPNAHTLAGVFSAASNLSDVVAGKQAHSVAVKTGCS-GDVYVGSSLLNMYCKTGF 168
Query: 155 MDRALKLFKEMPKRDLVSYCSMIQGLSIHGCGEDAVRLFNSMLMEGLVPDEVAFTIILTA 214
+ A KLF MP+R+ VS+ +MI G + + AV +F M E + +E A T +L+A
Sbjct: 169 VFDARKLFDRMPERNTVSWATMISGYASSDIADKAVEVFELMRREEEIQNEFALTSVLSA 228
Query: 215 CSHSGLVDEGWNYFQSMKQKYGISPSPDHFACMVDLLSRSGHLGDAYELMKSMHEPHAGA 274
+ V G S+ K G+ +V + ++ G L DA + + ++
Sbjct: 229 LTSDVFVYTG-RQVHSLAIKNGLLAIVSVANALVTMYAKCGSLDDAVRTFEFSGDKNSIT 287
Query: 275 WGALLGACKLHGDSD 289
W A++ GDSD
Sbjct: 288 WSAMVTGYAQGGDSD 302
>Medtr1g040635.1 | pentatricopeptide (PPR) repeat protein | HC |
chr1:15046911-15042560 | 20130731
Length = 737
Score = 242 bits (618), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 123/308 (39%), Positives = 186/308 (60%), Gaps = 6/308 (1%)
Query: 43 MIDGYAKAGDMAAARFLFEQAT--EKDVVAWSALISGYVQNGQPNQALKVFLEMESKN-- 98
+ID YAK + AR +F++ ++DVV W+ +I GY Q+G N AL++F EM +
Sbjct: 299 LIDMYAKCKSLEVARAMFDEICPKDRDVVTWTVMIGGYAQHGDANHALQLFSEMFKIDNC 358
Query: 99 VKPDEFILVSLMSATSQLGHLELAQWVDSYVSKSSIDLQQDHVIA-ALLDMNAKCGNMDR 157
+ P++F + ++ + ++L L + + +YV + S+ +A L+DM +K G++D
Sbjct: 359 IVPNDFTISCVLMSCARLSALNFGKQIHAYVLRRSLIYSDVLFVANCLIDMYSKSGDVDT 418
Query: 158 ALKLFKEMPKRDLVSYCSMIQGLSIHGCGEDAVRLFNSMLMEGLVPDEVAFTIILTACSH 217
A +F M KR+ VS+ S++ G +HG EDA R+F+ M E LVPD + F ++L ACSH
Sbjct: 419 AQVVFDSMSKRNAVSWTSLLTGYGMHGRSEDAFRVFDEMRKEALVPDGITFLVVLYACSH 478
Query: 218 SGLVDEGWNYFQSMKQKYGISPSPDHFACMVDLLSRSGHLGDAYELMKSMH-EPHAGAWG 276
SG+VD G N F M + +G+ P +H+ACMVDLL R+G L +A L+ M EP W
Sbjct: 479 SGMVDRGINLFYRMSKDFGVDPGVEHYACMVDLLGRAGRLCEATRLINDMSMEPTPVVWI 538
Query: 277 ALLGACKLHGDSDLGEIVANQLFELEPQNAANYILLSNIYAAAERWIDVSLVRSRMRERS 336
+LL AC+ H + +L E A +L EL+ N Y LLSNIYA A RW DV+ +R M+
Sbjct: 539 SLLSACRTHSNIELAEFAAKKLLELKADNDGTYTLLSNIYANARRWKDVARIRYLMKRTG 598
Query: 337 VQKIPGCS 344
++K PG S
Sbjct: 599 IKKRPGWS 606
Score = 136 bits (342), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 94/295 (31%), Positives = 156/295 (52%), Gaps = 15/295 (5%)
Query: 10 NAMLCGFVKDGDLSSARGVFDAMPEKNVVSFTTMIDGYAKAGDMAAARFLF----EQATE 65
NA++ + K G + A VF+ M K+VV++ M+ GY++ G A LF E+ E
Sbjct: 154 NALVDMYAKCGKMEDANKVFERMRFKDVVTWNAMVTGYSQNGRFEDALSLFGKMREEKIE 213
Query: 66 KDVVAWSALISGYVQNGQPNQALKVFLEMESKNVKPDEFILVSLMSATSQLGHLELAQWV 125
DVV WS++ISGY Q G +A+ VF +M +P+ L+SL+SA + +G L +
Sbjct: 214 SDVVTWSSVISGYAQRGFGCEAMDVFRQMCGCRCRPNVVTLMSLLSACASVGALLHGKET 273
Query: 126 DSYVSKSSI------DLQQDHVIAALLDMNAKCGNMDRALKLFKEM-PK-RDLVSYCSMI 177
Y K + D VI AL+DM AKC +++ A +F E+ PK RD+V++ MI
Sbjct: 274 HCYSVKFILKGEHNDDTDDLAVINALIDMYAKCKSLEVARAMFDEICPKDRDVVTWTVMI 333
Query: 178 QGLSIHGCGEDAVRLFNSMLM--EGLVPDEVAFTIILTACSHSGLVDEGWNYFQSMKQKY 235
G + HG A++LF+ M +VP++ + +L +C+ ++ G + ++
Sbjct: 334 GGYAQHGDANHALQLFSEMFKIDNCIVPNDFTISCVLMSCARLSALNFGKQIHAYVLRRS 393
Query: 236 GISPSPDHFA-CMVDLLSRSGHLGDAYELMKSMHEPHAGAWGALLGACKLHGDSD 289
I A C++D+ S+SG + A + SM + +A +W +LL +HG S+
Sbjct: 394 LIYSDVLFVANCLIDMYSKSGDVDTAQVVFDSMSKRNAVSWTSLLTGYGMHGRSE 448
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 60/202 (29%), Positives = 104/202 (51%), Gaps = 5/202 (2%)
Query: 34 EKNVVSFTTMIDGYAKAGDMAAARFLFEQATEK---DVVAWSALISGYVQNGQPNQALKV 90
E NV +I Y K + AR +F++ + D V W++++S Y PN A+ +
Sbjct: 42 ESNVFVCNAVISMYGKCKAVVHARKVFDELCYRGICDSVTWNSIVSVYSHCFVPNVAVSL 101
Query: 91 FLEME-SKNVKPDEFILVSLMSATSQLGHLELAQWVDSYVSKSSIDLQQDHVIAALLDMN 149
F EM + PD +V+++ LG + V + +S + ++ V AL+DM
Sbjct: 102 FREMTVGYGILPDTVGVVNILPVCGYLGLGLCGRQVHGFCVRSGL-VEDVFVGNALVDMY 160
Query: 150 AKCGNMDRALKLFKEMPKRDLVSYCSMIQGLSIHGCGEDAVRLFNSMLMEGLVPDEVAFT 209
AKCG M+ A K+F+ M +D+V++ +M+ G S +G EDA+ LF M E + D V ++
Sbjct: 161 AKCGKMEDANKVFERMRFKDVVTWNAMVTGYSQNGRFEDALSLFGKMREEKIESDVVTWS 220
Query: 210 IILTACSHSGLVDEGWNYFQSM 231
+++ + G E + F+ M
Sbjct: 221 SVISGYAQRGFGCEAMDVFRQM 242
>Medtr3g434800.1 | pentatricopeptide (PPR) repeat protein | HC |
chr3:11323375-11320804 | 20130731
Length = 724
Score = 242 bits (618), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 125/306 (40%), Positives = 188/306 (61%), Gaps = 4/306 (1%)
Query: 43 MIDGYAKAGD--MAAARFLFEQATEKDVVAWSALISGYVQNGQ-PNQALKVFLEMESKNV 99
+ID Y+K M +FE+ + D+V W+ +ISG+ Q+ AL F EM+
Sbjct: 284 LIDLYSKCAPHGMLECMKVFEEIPKPDLVLWNTMISGFSQHEDLCEDALSSFREMQRVGF 343
Query: 100 KPDEFILVSLMSATSQLGHLELAQWVDSYVSKSSIDLQQDHVIAALLDMNAKCGNMDRAL 159
PD+ V ++SA S L + + V + KS I + V A + M +KCGN+ A
Sbjct: 344 CPDDCSFVCVISACSNLSSPSVGKQVHALAIKSDIPCNRVSVNNAFVAMYSKCGNLHDAR 403
Query: 160 KLFKEMPKRDLVSYCSMIQGLSIHGCGEDAVRLFNSMLMEGLVPDEVAFTIILTACSHSG 219
++F MP+++ VS SMI G + HG ++++LF ML E +VP+ + F +L+AC+H+G
Sbjct: 404 RIFDTMPEQNTVSLNSMIAGYAQHGAEIESLQLFELMLQEKIVPNNITFISVLSACAHTG 463
Query: 220 LVDEGWNYFQSMKQKYGISPSPDHFACMVDLLSRSGHLGDAYELMKSM-HEPHAGAWGAL 278
VDEG YF MK+K+GI P +H++CM+DLL R+G L A ++++M +P + W AL
Sbjct: 464 KVDEGEKYFNMMKEKFGIEPEAEHYSCMIDLLGRAGKLNKAERIIETMPFDPGSIEWAAL 523
Query: 279 LGACKLHGDSDLGEIVANQLFELEPQNAANYILLSNIYAAAERWIDVSLVRSRMRERSVQ 338
LGACK HG+ +L AN+ +LEP NAA Y++LSN+YA+A RW + + V+ MRER V+
Sbjct: 524 LGACKKHGNVELAVKAANKFLQLEPYNAAPYVMLSNVYASANRWEEAATVKRLMRERGVK 583
Query: 339 KIPGCS 344
K PGCS
Sbjct: 584 KKPGCS 589
Score = 92.4 bits (228), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 96/381 (25%), Positives = 158/381 (41%), Gaps = 94/381 (24%)
Query: 5 NVASWNAMLCGFVKDGDLSSARGVFDAMPEKNVVSFTTMIDGYAKAGDMAAARFLFEQAT 64
NV S+N ++ K + A +FD +PE +VVS+ T+I +A+ G+ A +F++
Sbjct: 75 NVFSYNTIIHACAKHNLPNLAHQLFDEIPEPDVVSYNTLIAVHARRGECGQAVSVFKEVR 134
Query: 65 EKDVV----AWSALISGYVQN---------------------------------GQPNQA 87
E +V S +IS V++ G+ N+A
Sbjct: 135 EVGLVLDGFTLSGVISASVEDVGLVRQLHCFALLCGYDCYASVCNAVLACYGRLGRLNEA 194
Query: 88 LKVFL---------------------------------EMESKNVKPDEFILVSLMSATS 114
+VF EME ++ D F + S+++A +
Sbjct: 195 WRVFREMGEGCRDMVSWNAMIVACGQHREGAKALRLFGEMERMGLEVDMFTMASVLTAFT 254
Query: 115 QLGHLELAQWVDSYVSKSSIDLQQDHVIAALLDMNAKCG--NMDRALKLFKEMPKRDLVS 172
L L + KS + HV + L+D+ +KC M +K+F+E+PK DLV
Sbjct: 255 CLKDLAGGMQFHGKMIKSGFH-RNSHVGSGLIDLYSKCAPHGMLECMKVFEEIPKPDLVL 313
Query: 173 YCSMIQGLSIH-GCGEDAVRLFNSMLMEGLVPDEVAFTIILTACSHSGLVDEGWNYFQSM 231
+ +MI G S H EDA+ F M G PD+ +F +++ACS+ G
Sbjct: 314 WNTMISGFSQHEDLCEDALSSFREMQRVGFCPDDCSFVCVISACSNLSSPSVG------- 366
Query: 232 KQKYGISPSPDHFAC--------MVDLLSRSGHLGDAYELMKSMHEPHAGAWGALLGACK 283
KQ + ++ D C V + S+ G+L DA + +M E + + +++
Sbjct: 367 KQVHALAIKSD-IPCNRVSVNNAFVAMYSKCGNLHDARRIFDTMPEQNTVSLNSMIAGYA 425
Query: 284 LHGDSDLGEIVANQLFELEPQ 304
HG EI + QLFEL Q
Sbjct: 426 QHG----AEIESLQLFELMLQ 442
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 79/284 (27%), Positives = 125/284 (44%), Gaps = 24/284 (8%)
Query: 16 FVKDGDLSSARGVFDAMPEKNVVSFTTMIDGYAKAGDMAAARFLFEQATEKDVVAWSALI 75
+ K G S+A F NV S+ T+I AK A LF++ E DVV+++ LI
Sbjct: 55 YSKFGTFSNALTAFHFTGYPNVFSYNTIIHACAKHNLPNLAHQLFDEIPEPDVVSYNTLI 114
Query: 76 SGYVQNGQPNQALKVFLEMESKNVKPDEFILVSLMSAT-------SQLGHLELAQWVDSY 128
+ + + G+ QA+ VF E+ + D F L ++SA+ QL L D Y
Sbjct: 115 AVHARRGECGQAVSVFKEVREVGLVLDGFTLSGVISASVEDVGLVRQLHCFALLCGYDCY 174
Query: 129 VSKSSIDLQQDHVIAALLDMNAKCGNMDRALKLFKEMPK--RDLVSYCSMIQGLSIHGCG 186
S V A+L + G ++ A ++F+EM + RD+VS+ +MI H G
Sbjct: 175 AS----------VCNAVLACYGRLGRLNEAWRVFREMGEGCRDMVSWNAMIVACGQHREG 224
Query: 187 EDAVRLFNSMLMEGLVPDEVAFTIILTACSHSGLVD-EGWNYFQSMKQKYGISPSPDHFA 245
A+RLF M GL D +LTA + L D G F K G + +
Sbjct: 225 AKALRLFGEMERMGLEVDMFTMASVLTA--FTCLKDLAGGMQFHGKMIKSGFHRNSHVGS 282
Query: 246 CMVDLLSRSGHLG--DAYELMKSMHEPHAGAWGALLGACKLHGD 287
++DL S+ G + ++ + + +P W ++ H D
Sbjct: 283 GLIDLYSKCAPHGMLECMKVFEEIPKPDLVLWNTMISGFSQHED 326
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 56/243 (23%), Positives = 108/243 (44%), Gaps = 36/243 (14%)
Query: 1 MPQRNVASWNAMLCGFVKDGDLSSARGVFDAMPEKNVVSFTTMIDGYAKAGDMAAARFLF 60
+P V+ NA + + K G+L AR +FD MPE+N VS +MI GYA
Sbjct: 378 IPCNRVSVNNAFVAMYSKCGNLHDARRIFDTMPEQNTVSLNSMIAGYA------------ 425
Query: 61 EQATEKDVVAWSALISGYVQNGQPNQALKVFLEMESKNVKPDEFILVSLMSATSQLGHL- 119
Q+G ++L++F M + + P+ +S++SA + G +
Sbjct: 426 -------------------QHGAEIESLQLFELMLQEKIVPNNITFISVLSACAHTGKVD 466
Query: 120 ELAQWVDSYVSKSSIDLQQDHVIAALLDMNAKCGNMDRALKLFKEMP-KRDLVSYCSMIQ 178
E ++ + K I+ + +H + ++D+ + G +++A ++ + MP + + +++
Sbjct: 467 EGEKYFNMMKEKFGIEPEAEHY-SCMIDLLGRAGKLNKAERIIETMPFDPGSIEWAALLG 525
Query: 179 GLSIHGCGEDAVRLFNSMLMEGLVPDEVAFTIILTACSHSGLVDEGWNYFQSMKQKYGIS 238
HG E AV+ N L L P A ++L+ S E + + ++ G+
Sbjct: 526 ACKKHGNVELAVKAANKFLQ--LEPYNAAPYVMLSNVYASANRWEEAATVKRLMRERGVK 583
Query: 239 PSP 241
P
Sbjct: 584 KKP 586
>Medtr1g007600.1 | pentatricopeptide (PPR) repeat protein | HC |
chr1:452191-449631 | 20130731
Length = 827
Score = 242 bits (617), Expect = 4e-64, Method: Compositional matrix adjust.
Identities = 122/347 (35%), Positives = 210/347 (60%), Gaps = 7/347 (2%)
Query: 3 QRNVASWNAMLCGFVKDGDLSSARGVFDAMPEKNVVSFTTMIDGYAKAGDMAAARFLFEQ 62
Q N A++ + K D+ +A+ FD + E++ ++ +I GYA+ + R L E+
Sbjct: 438 QSNSFVGGALVEMYCKCNDIIAAQMAFDEISERDTSTWNALISGYARCNQIGKIRELVER 497
Query: 63 ----ATEKDVVAWSALISGYVQNGQPNQALKVFLEMESKNVKPDEFILVSLMSATSQLGH 118
E +V W+++++G V+N Q + A+++F EM+ +++PD + + +++A S+L
Sbjct: 498 MKSDGFEPNVYTWNSILAGLVENKQYDLAMQLFNEMQVSSLRPDIYTVGIILAACSKLAT 557
Query: 119 LELAQWVDSYVSKSSIDLQQDHVIAALLDMNAKCGNMDRALKLFKEMPKRDLVSYCSMIQ 178
+ + V +Y ++ D H+ A L+DM AKCG++ +++ ++ +LV + +M+
Sbjct: 558 IHRGKQVHAYSIRAGYD-SDAHIGATLVDMYAKCGSIKHCYQVYNKISNPNLVCHNAMLT 616
Query: 179 GLSIHGCGEDAVRLFNSMLMEGLVPDEVAFTIILTACSHSGLVDEGWNYFQSMKQKYGIS 238
++HG GE+ + +F ML + PD V F +L++C H+G + G+ F M + Y I+
Sbjct: 617 AYAMHGHGEEGIVIFRRMLDSRVRPDHVTFLSVLSSCVHAGSIKIGYECFYLM-ETYNIT 675
Query: 239 PSPDHFACMVDLLSRSGHLGDAYELMKSM-HEPHAGAWGALLGACKLHGDSDLGEIVANQ 297
P+ H+ CMVDLLSR+G L +AY+L+K+M E + W ALLG C +H + LGEI A +
Sbjct: 676 PTLKHYTCMVDLLSRAGKLDEAYQLIKNMPMEADSVTWSALLGGCFIHKEVALGEIAAEK 735
Query: 298 LFELEPQNAANYILLSNIYAAAERWIDVSLVRSRMRERSVQKIPGCS 344
L ELEP N NY+LL+N+YA+A RW D++ R M ++ +QK PGCS
Sbjct: 736 LIELEPSNTGNYVLLANLYASAGRWHDLAKTRELMNDKGMQKSPGCS 782
Score = 107 bits (267), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 79/330 (23%), Positives = 148/330 (44%), Gaps = 41/330 (12%)
Query: 10 NAMLCGFVKDGDLSSARGVFDAMPEKNVVSFTTMIDGYAKAGDMAAARFLFEQ----ATE 65
NA++ + + GD+ SA +F K S+ TMI GY + G++ A+ LF Q E
Sbjct: 309 NALVGMYRRCGDMKSAFKIFSKFARKCAASYNTMIVGYLENGNVGKAKELFYQMEQEGVE 368
Query: 66 KDVVAWSALISGYVQNGQPNQALKVFLEMESKNVKPDEFILVSLMSATSQLGHLELAQWV 125
+D ++W+ +ISG+V N + AL +F ++ + ++PD F L S+++ + + + + +
Sbjct: 369 RDRISWNCMISGHVDNFMFDDALMLFRDLLMEGIEPDSFTLGSILTGFADMTCIRQGKEI 428
Query: 126 DSYVSKSSIDLQQDHVIAALLDMNAKCGNMDRALKLFKEMPKRDLVSYCSMIQGLS---- 181
S + V AL++M KC ++ A F E+ +RD ++ ++I G +
Sbjct: 429 HSIAIVKGLQ-SNSFVGGALVEMYCKCNDIIAAQMAFDEISERDTSTWNALISGYARCNQ 487
Query: 182 --------------------------IHGCGED-----AVRLFNSMLMEGLVPDEVAFTI 210
+ G E+ A++LFN M + L PD I
Sbjct: 488 IGKIRELVERMKSDGFEPNVYTWNSILAGLVENKQYDLAMQLFNEMQVSSLRPDIYTVGI 547
Query: 211 ILTACSHSGLVDEGWNYFQSMKQKYGISPSPDHFACMVDLLSRSGHLGDAYELMKSMHEP 270
IL ACS + G + + G A +VD+ ++ G + Y++ + P
Sbjct: 548 ILAACSKLATIHRG-KQVHAYSIRAGYDSDAHIGATLVDMYAKCGSIKHCYQVYNKISNP 606
Query: 271 HAGAWGALLGACKLHGDSDLGEIVANQLFE 300
+ A+L A +HG + G ++ ++ +
Sbjct: 607 NLVCHNAMLTAYAMHGHGEEGIVIFRRMLD 636
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 66/239 (27%), Positives = 117/239 (48%), Gaps = 6/239 (2%)
Query: 5 NVASWNAMLCGFVKDGDLSSARGVFDAMPEKNVVSFTTMIDGYAKAGDMAAARFLFEQ-- 62
NV NA++ + K G L A+ V + M +K+ VS+ ++I G + A L E
Sbjct: 168 NVYVGNALIDMYGKCGSLDEAKKVLEGMTQKDCVSWNSIITACVANGVVYEALDLLENML 227
Query: 63 --ATEKDVVAWSALISGYVQNGQPNQALKVFLEMESKNVKPDEFILVSLMSATSQLGHLE 120
E +VV WSA+I G+ N +++++F M V PD L S++ A S++ L
Sbjct: 228 LSELEPNVVTWSAVIGGFSSNAYDVESVELFARMVGAGVAPDARTLASVLPACSRMKWLF 287
Query: 121 LAQWVDSYVSKSSIDLQQDHVIAALLDMNAKCGNMDRALKLFKEMPKRDLVSYCSMIQGL 180
+ + + Y+ + + V AL+ M +CG+M A K+F + ++ SY +MI G
Sbjct: 288 VGKELHGYIVRHEL-FSNGFVANALVGMYRRCGDMKSAFKIFSKFARKCAASYNTMIVGY 346
Query: 181 SIHGCGEDAVRLFNSMLMEGLVPDEVAFTIILTACSHSGLVDEGWNYFQSMKQKYGISP 239
+G A LF M EG+ D +++ +++ + + D+ F+ + + GI P
Sbjct: 347 LENGNVGKAKELFYQMEQEGVERDRISWNCMISGHVDNFMFDDALMLFRDLLME-GIEP 404
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 66/253 (26%), Positives = 119/253 (47%), Gaps = 8/253 (3%)
Query: 41 TTMIDGYAKAGDMAAARFLFEQATEKDVVAWSALISGYVQNGQPNQALKVFLEMESKNV- 99
T ++ Y+ A +F++ T K++ +W+A++ ++ G + +F E +
Sbjct: 70 TKLLQMYSINSSFEDAWHMFDKMTLKNLHSWTAVLRLHLNMGLFYKGFMLFEEFLCDGLG 129
Query: 100 -KPDEFILVSLMSATSQLGHLELAQWVDSYVSKSSIDLQQDHVIAALLDMNAKCGNMDRA 158
K D F+ +++ LG LEL + V V K + +V AL+DM KCG++D A
Sbjct: 130 EKLDFFVFPVVLNICCGLGDLELGRQVHGMVLKHGF-VTNVYVGNALIDMYGKCGSLDEA 188
Query: 159 LKLFKEMPKRDLVSYCSMIQGLSIHGCGEDAVRLFNSMLMEGLVPDEVAFTIILTACSHS 218
K+ + M ++D VS+ S+I +G +A+ L +ML+ L P+ V ++ ++ S +
Sbjct: 189 KKVLEGMTQKDCVSWNSIITACVANGVVYEALDLLENMLLSELEPNVVTWSAVIGGFSSN 248
Query: 219 GLVDEGWNYFQSMKQKYGISPSPDHFACMVDLLSRSGHLGDAYELMKSM--HEPHAGAW- 275
E F M G++P A ++ SR L EL + HE + +
Sbjct: 249 AYDVESVELFARMVGA-GVAPDARTLASVLPACSRMKWLFVGKELHGYIVRHELFSNGFV 307
Query: 276 -GALLGACKLHGD 287
AL+G + GD
Sbjct: 308 ANALVGMYRRCGD 320
>Medtr5g088310.1 | pentatricopeptide (PPR) repeat protein | HC |
chr5:38310385-38313323 | 20130731
Length = 684
Score = 242 bits (617), Expect = 5e-64, Method: Compositional matrix adjust.
Identities = 138/387 (35%), Positives = 221/387 (57%), Gaps = 45/387 (11%)
Query: 1 MPQRNVASWNAMLCGFVKDGDLSSARGVFDAM----PEKNVVSFTT-------------- 42
MPQRN+A+WNA + V+D A F E N ++F
Sbjct: 169 MPQRNLATWNAYISNAVQDRRSLDAIVAFKEFLCVHGEPNSITFCAFLNACVDMVRLNLG 228
Query: 43 ---------------------MIDGYAKAGDMAAARFLFEQ-ATEKDVVAWSALISGYVQ 80
+ID Y K GD+ +A +F + K+VV+W ++++ VQ
Sbjct: 229 RQLHAFIVRCGYKEDVSVANGLIDFYGKCGDIVSAEMVFNRIGNRKNVVSWCSMLAALVQ 288
Query: 81 NGQPNQALKVFLEMESKNVKPDEFILVSLMSATSQLGHLELAQWVDSYVSKSSIDLQQDH 140
N + +A VFL+ K V+P +F++ S++SA ++LG LEL + V + K+ ++
Sbjct: 289 NHEEERACMVFLQAR-KEVEPTDFMISSVLSACAELGGLELGRSVHALAVKACVE-DNIF 346
Query: 141 VIAALLDMNAKCGNMDRALKLFKEMPKRDLVSYCSMIQGLSIHGCGEDAVRLFNSMLM-- 198
V +AL+DM KCG+++ A ++F E+P+R+LV++ +MI G + G + A+RLF M +
Sbjct: 347 VGSALVDMYGKCGSIENAEQVFSELPERNLVTWNAMIGGYAHQGDIDMALRLFEEMTLGS 406
Query: 199 EGLVPDEVAFTIILTACSHSGLVDEGWNYFQSMKQKYGISPSPDHFACMVDLLSRSGHLG 258
G+ P V IL+ CS G V+ G F+SM+ YGI P +HFAC+VDLL RSG +
Sbjct: 407 HGIRPSYVTLISILSVCSRVGAVERGIQIFESMRLNYGIEPGAEHFACVVDLLGRSGLVD 466
Query: 259 DAYELMKSMH-EPHAGAWGALLGACKLHGDSDLGEIVANQLFELEPQNAANYILLSNIYA 317
AYE +++M +P WGALLGAC++HG ++LG+I A +LFEL+ ++ N+++LSN+ A
Sbjct: 467 RAYEFIQNMAIQPTISVWGALLGACRMHGKTELGKIAAEKLFELDHVDSGNHVVLSNMLA 526
Query: 318 AAERWIDVSLVRSRMRERSVQKIPGCS 344
+A RW + ++VR M++ ++K G S
Sbjct: 527 SAGRWEEATVVRKEMKDIGIKKNVGYS 553
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 61/261 (23%), Positives = 127/261 (48%), Gaps = 10/261 (3%)
Query: 42 TMIDGYAKAGDMAAARFLFEQATEKDVVAWSALISGYVQNGQPNQALKVFLEMESKNVKP 101
+ D Y K G A +F++ ++++ W+A IS VQ+ + A+ F E + +P
Sbjct: 148 SCFDMYCKTGFRGDACNMFDEMPQRNLATWNAYISNAVQDRRSLDAIVAFKEFLCVHGEP 207
Query: 102 DEFILVSLMSATSQLGHLELAQWVDSYVSKSSIDLQQDHVIA-ALLDMNAKCGNMDRALK 160
+ + ++A + L L + + +++ + ++D +A L+D KCG++ A
Sbjct: 208 NSITFCAFLNACVDMVRLNLGRQLHAFIVRCG--YKEDVSVANGLIDFYGKCGDIVSAEM 265
Query: 161 LFKEMPKR-DLVSYCSMIQGLSIHGCGEDAVRLFNSMLMEGLVPDEVAFTIILTACSHSG 219
+F + R ++VS+CSM+ L + E A +F E + P + + +L+AC+ G
Sbjct: 266 VFNRIGNRKNVVSWCSMLAALVQNHEEERACMVFLQARKE-VEPTDFMISSVLSACAELG 324
Query: 220 LVDEGWNYFQSMKQKYGISPSPDHFACMVDLLSRSGHLGDAYELMKSMHEPHAGAWGALL 279
++ G + ++ K + + + +VD+ + G + +A ++ + E + W A++
Sbjct: 325 GLELGRS-VHALAVKACVEDNIFVGSALVDMYGKCGSIENAEQVFSELPERNLVTWNAMI 383
Query: 280 GACKLHGDSDLGEIVANQLFE 300
G GD D+ A +LFE
Sbjct: 384 GGYAHQGDIDM----ALRLFE 400
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 44/173 (25%), Positives = 77/173 (44%), Gaps = 1/173 (0%)
Query: 43 MIDGYAKAGDMAAARFLFEQATEKDVVAWSALISGYVQNGQPNQALKVFLEMESKNVKPD 102
+++ Y+K + +A+ + + VV W++LISG V N + AL F M NV+P+
Sbjct: 48 LVNMYSKLDLLNSAQHVLSLTHLRTVVTWTSLISGCVHNRRFLPALLHFTNMRRDNVQPN 107
Query: 103 EFILVSLMSATSQLGHLELAQWVDSYVSKSSIDLQQDHVIAALLDMNAKCGNMDRALKLF 162
+F + A++ + + + K + + V + DM K G A +F
Sbjct: 108 DFTFPCVFKASAFVQIPMTGKQIHGLALKGGM-IYDVFVGCSCFDMYCKTGFRGDACNMF 166
Query: 163 KEMPKRDLVSYCSMIQGLSIHGCGEDAVRLFNSMLMEGLVPDEVAFTIILTAC 215
EMP+R+L ++ + I DA+ F L P+ + F L AC
Sbjct: 167 DEMPQRNLATWNAYISNAVQDRRSLDAIVAFKEFLCVHGEPNSITFCAFLNAC 219
>Medtr7g083820.1 | pentatricopeptide (PPR) repeat protein | HC |
chr7:32273955-32271537 | 20130731
Length = 672
Score = 241 bits (616), Expect = 6e-64, Method: Compositional matrix adjust.
Identities = 131/397 (32%), Positives = 221/397 (55%), Gaps = 55/397 (13%)
Query: 1 MPQRNVASWNAMLCGFVKDGDLSSARGVF------------------------------D 30
+P+RNV SW +M+ G+V++ A +F
Sbjct: 147 IPERNVVSWTSMISGYVQNERAREAVFLFKEFLLVDETDYDEIVGVGVGVDSVLLGCVIS 206
Query: 31 AMPEKNVVSFT--------------------TMIDGYAKAGDMAAARFLFEQATEKDVVA 70
A V S T T++D YAK G+++ +R +F+ E DV +
Sbjct: 207 ACARVCVKSVTECVHGLAVKKGFEGCLAVGNTLMDAYAKCGEISVSRKVFDGMEETDVCS 266
Query: 71 WSALISGYVQNGQPNQALKVFLEMESK-NVKPDEFILVSLMSATSQLGHLELAQWVDSYV 129
W++LI+ Y QNG +A +F +M + V+ + L +++ A + G L++ + + V
Sbjct: 267 WNSLIAVYAQNGLSVEAFSLFSDMVKRGEVRYNAVTLSAVLLACAHSGALQIGKCIHDQV 326
Query: 130 SKSSIDLQQDHVI-AALLDMNAKCGNMDRALKLFKEMPKRDLVSYCSMIQGLSIHGCGED 188
K ++L+ + V+ +++DM KCG ++ A K F + ++++ S+ M+ G +HG G++
Sbjct: 327 VK--MELEDNLVVGTSIVDMYCKCGRVEMARKAFDRLKRKNVKSWTVMVAGYGMHGHGKE 384
Query: 189 AVRLFNSMLMEGLVPDEVAFTIILTACSHSGLVDEGWNYFQSMKQKYGISPSPDHFACMV 248
A+++F M+ G+ P+ + F +L ACSH+GL+ EGW++F MK ++ + P +H++CMV
Sbjct: 385 AMKVFYEMIRCGIKPNYITFVSVLAACSHAGLLKEGWHWFNKMKCEFDVEPGIEHYSCMV 444
Query: 249 DLLSRSGHLGDAYELMKSMH-EPHAGAWGALLGACKLHGDSDLGEIVANQLFELEPQNAA 307
DLL R+G+L +AY L++ M +P WG+LLGAC++H + +LGEI A +LF+L+P N
Sbjct: 445 DLLGRAGYLKEAYGLIQEMKVKPDFIVWGSLLGACRIHKNVELGEISARKLFKLDPSNCG 504
Query: 308 NYILLSNIYAAAERWIDVSLVRSRMRERSVQKIPGCS 344
Y+LLSNIYA A RW DV +R M+ + K PG S
Sbjct: 505 YYVLLSNIYADAGRWDDVERMRILMKNHGLLKTPGYS 541
Score = 90.1 bits (222), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 86/370 (23%), Positives = 157/370 (42%), Gaps = 59/370 (15%)
Query: 3 QRNVASWNAMLCGFVKDGDLSSARGVFDAM------PEKNVVSFT--------------- 41
+ +V SWN+++ F + GD A F +M P ++ T
Sbjct: 48 KTSVYSWNSIIADFARSGDSLQALYAFSSMRKLSLHPNRSTFPCTIKSCSSLYDLCAGKQ 107
Query: 42 ------------------TMIDGYAKAGDMAAARFLFEQATEKDVVAWSALISGYVQNGQ 83
+ID Y+K G + AR LF++ E++VV+W+++ISGYVQN +
Sbjct: 108 IHQQAFVFGYGSDIFVASALIDMYSKCGYLNDARKLFDEIPERNVVSWTSMISGYVQNER 167
Query: 84 PNQALKVFL-----------EMESKNVKPDEFILVSLMSATSQLGHLELAQWVDSYVSKS 132
+A+ +F E+ V D +L ++SA +++ + + V K
Sbjct: 168 AREAVFLFKEFLLVDETDYDEIVGVGVGVDSVLLGCVISACARVCVKSVTECVHGLAVKK 227
Query: 133 SIDLQQDHVIAALLDMNAKCGNMDRALKLFKEMPKRDLVSYCSMIQGLSIHGCGEDAVRL 192
+ V L+D AKCG + + K+F M + D+ S+ S+I + +G +A L
Sbjct: 228 GFE-GCLAVGNTLMDAYAKCGEISVSRKVFDGMEETDVCSWNSLIAVYAQNGLSVEAFSL 286
Query: 193 FNSMLMEGLVP-DEVAFTIILTACSHSGLVDEGWNYFQSMKQKYGISPSPDHFACMVDLL 251
F+ M+ G V + V + +L AC+HSG + G K + + +VD+
Sbjct: 287 FSDMVKRGEVRYNAVTLSAVLLACAHSGALQIG-KCIHDQVVKMELEDNLVVGTSIVDMY 345
Query: 252 SRSGHLGDAYELMKSMHEPHAGAWGALLGACKLHGDSDLGEIVANQLFE--LEPQNAANY 309
+ G + A + + + +W ++ +HG V ++ ++P NY
Sbjct: 346 CKCGRVEMARKAFDRLKRKNVKSWTVMVAGYGMHGHGKEAMKVFYEMIRCGIKP----NY 401
Query: 310 ILLSNIYAAA 319
I ++ AA
Sbjct: 402 ITFVSVLAAC 411
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 59/242 (24%), Positives = 110/242 (45%), Gaps = 18/242 (7%)
Query: 54 AAARFLFEQATEK-DVVAWSALISGYVQNGQPNQALKVFLEMESKNVKPDEFILVSLMSA 112
A R +F + +K V +W+++I+ + ++G QAL F M ++ P+ + +
Sbjct: 36 ANLRSMFGKYVDKTSVYSWNSIIADFARSGDSLQALYAFSSMRKLSLHPNRSTFPCTIKS 95
Query: 113 TSQLGHLELAQWV--DSYVSKSSIDLQQDHVIAALLDMNAKCGNMDRALKLFKEMPKRDL 170
S L L + + ++V D+ V +AL+DM +KCG ++ A KLF E+P+R++
Sbjct: 96 CSSLYDLCAGKQIHQQAFVFGYGSDI---FVASALIDMYSKCGYLNDARKLFDEIPERNV 152
Query: 171 VSYCSMIQGLSIHGCGEDAVRLFNSMLM-----------EGLVPDEVAFTIILTACSHSG 219
VS+ SMI G + +AV LF L+ G+ D V +++AC+
Sbjct: 153 VSWTSMISGYVQNERAREAVFLFKEFLLVDETDYDEIVGVGVGVDSVLLGCVISACARV- 211
Query: 220 LVDEGWNYFQSMKQKYGISPSPDHFACMVDLLSRSGHLGDAYELMKSMHEPHAGAWGALL 279
V + K G ++D ++ G + + ++ M E +W +L+
Sbjct: 212 CVKSVTECVHGLAVKKGFEGCLAVGNTLMDAYAKCGEISVSRKVFDGMEETDVCSWNSLI 271
Query: 280 GA 281
Sbjct: 272 AV 273
>Medtr7g083820.2 | pentatricopeptide (PPR) repeat protein | HC |
chr7:32273955-32271537 | 20130731
Length = 672
Score = 241 bits (616), Expect = 6e-64, Method: Compositional matrix adjust.
Identities = 131/397 (32%), Positives = 221/397 (55%), Gaps = 55/397 (13%)
Query: 1 MPQRNVASWNAMLCGFVKDGDLSSARGVF------------------------------D 30
+P+RNV SW +M+ G+V++ A +F
Sbjct: 147 IPERNVVSWTSMISGYVQNERAREAVFLFKEFLLVDETDYDEIVGVGVGVDSVLLGCVIS 206
Query: 31 AMPEKNVVSFT--------------------TMIDGYAKAGDMAAARFLFEQATEKDVVA 70
A V S T T++D YAK G+++ +R +F+ E DV +
Sbjct: 207 ACARVCVKSVTECVHGLAVKKGFEGCLAVGNTLMDAYAKCGEISVSRKVFDGMEETDVCS 266
Query: 71 WSALISGYVQNGQPNQALKVFLEMESK-NVKPDEFILVSLMSATSQLGHLELAQWVDSYV 129
W++LI+ Y QNG +A +F +M + V+ + L +++ A + G L++ + + V
Sbjct: 267 WNSLIAVYAQNGLSVEAFSLFSDMVKRGEVRYNAVTLSAVLLACAHSGALQIGKCIHDQV 326
Query: 130 SKSSIDLQQDHVI-AALLDMNAKCGNMDRALKLFKEMPKRDLVSYCSMIQGLSIHGCGED 188
K ++L+ + V+ +++DM KCG ++ A K F + ++++ S+ M+ G +HG G++
Sbjct: 327 VK--MELEDNLVVGTSIVDMYCKCGRVEMARKAFDRLKRKNVKSWTVMVAGYGMHGHGKE 384
Query: 189 AVRLFNSMLMEGLVPDEVAFTIILTACSHSGLVDEGWNYFQSMKQKYGISPSPDHFACMV 248
A+++F M+ G+ P+ + F +L ACSH+GL+ EGW++F MK ++ + P +H++CMV
Sbjct: 385 AMKVFYEMIRCGIKPNYITFVSVLAACSHAGLLKEGWHWFNKMKCEFDVEPGIEHYSCMV 444
Query: 249 DLLSRSGHLGDAYELMKSMH-EPHAGAWGALLGACKLHGDSDLGEIVANQLFELEPQNAA 307
DLL R+G+L +AY L++ M +P WG+LLGAC++H + +LGEI A +LF+L+P N
Sbjct: 445 DLLGRAGYLKEAYGLIQEMKVKPDFIVWGSLLGACRIHKNVELGEISARKLFKLDPSNCG 504
Query: 308 NYILLSNIYAAAERWIDVSLVRSRMRERSVQKIPGCS 344
Y+LLSNIYA A RW DV +R M+ + K PG S
Sbjct: 505 YYVLLSNIYADAGRWDDVERMRILMKNHGLLKTPGYS 541
Score = 90.1 bits (222), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 86/370 (23%), Positives = 157/370 (42%), Gaps = 59/370 (15%)
Query: 3 QRNVASWNAMLCGFVKDGDLSSARGVFDAM------PEKNVVSFT--------------- 41
+ +V SWN+++ F + GD A F +M P ++ T
Sbjct: 48 KTSVYSWNSIIADFARSGDSLQALYAFSSMRKLSLHPNRSTFPCTIKSCSSLYDLCAGKQ 107
Query: 42 ------------------TMIDGYAKAGDMAAARFLFEQATEKDVVAWSALISGYVQNGQ 83
+ID Y+K G + AR LF++ E++VV+W+++ISGYVQN +
Sbjct: 108 IHQQAFVFGYGSDIFVASALIDMYSKCGYLNDARKLFDEIPERNVVSWTSMISGYVQNER 167
Query: 84 PNQALKVFL-----------EMESKNVKPDEFILVSLMSATSQLGHLELAQWVDSYVSKS 132
+A+ +F E+ V D +L ++SA +++ + + V K
Sbjct: 168 AREAVFLFKEFLLVDETDYDEIVGVGVGVDSVLLGCVISACARVCVKSVTECVHGLAVKK 227
Query: 133 SIDLQQDHVIAALLDMNAKCGNMDRALKLFKEMPKRDLVSYCSMIQGLSIHGCGEDAVRL 192
+ V L+D AKCG + + K+F M + D+ S+ S+I + +G +A L
Sbjct: 228 GFE-GCLAVGNTLMDAYAKCGEISVSRKVFDGMEETDVCSWNSLIAVYAQNGLSVEAFSL 286
Query: 193 FNSMLMEGLVP-DEVAFTIILTACSHSGLVDEGWNYFQSMKQKYGISPSPDHFACMVDLL 251
F+ M+ G V + V + +L AC+HSG + G K + + +VD+
Sbjct: 287 FSDMVKRGEVRYNAVTLSAVLLACAHSGALQIG-KCIHDQVVKMELEDNLVVGTSIVDMY 345
Query: 252 SRSGHLGDAYELMKSMHEPHAGAWGALLGACKLHGDSDLGEIVANQLFE--LEPQNAANY 309
+ G + A + + + +W ++ +HG V ++ ++P NY
Sbjct: 346 CKCGRVEMARKAFDRLKRKNVKSWTVMVAGYGMHGHGKEAMKVFYEMIRCGIKP----NY 401
Query: 310 ILLSNIYAAA 319
I ++ AA
Sbjct: 402 ITFVSVLAAC 411
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 59/242 (24%), Positives = 110/242 (45%), Gaps = 18/242 (7%)
Query: 54 AAARFLFEQATEK-DVVAWSALISGYVQNGQPNQALKVFLEMESKNVKPDEFILVSLMSA 112
A R +F + +K V +W+++I+ + ++G QAL F M ++ P+ + +
Sbjct: 36 ANLRSMFGKYVDKTSVYSWNSIIADFARSGDSLQALYAFSSMRKLSLHPNRSTFPCTIKS 95
Query: 113 TSQLGHLELAQWV--DSYVSKSSIDLQQDHVIAALLDMNAKCGNMDRALKLFKEMPKRDL 170
S L L + + ++V D+ V +AL+DM +KCG ++ A KLF E+P+R++
Sbjct: 96 CSSLYDLCAGKQIHQQAFVFGYGSDI---FVASALIDMYSKCGYLNDARKLFDEIPERNV 152
Query: 171 VSYCSMIQGLSIHGCGEDAVRLFNSMLM-----------EGLVPDEVAFTIILTACSHSG 219
VS+ SMI G + +AV LF L+ G+ D V +++AC+
Sbjct: 153 VSWTSMISGYVQNERAREAVFLFKEFLLVDETDYDEIVGVGVGVDSVLLGCVISACARV- 211
Query: 220 LVDEGWNYFQSMKQKYGISPSPDHFACMVDLLSRSGHLGDAYELMKSMHEPHAGAWGALL 279
V + K G ++D ++ G + + ++ M E +W +L+
Sbjct: 212 CVKSVTECVHGLAVKKGFEGCLAVGNTLMDAYAKCGEISVSRKVFDGMEETDVCSWNSLI 271
Query: 280 GA 281
Sbjct: 272 AV 273
>Medtr8g087980.1 | PPR containing plant-like protein | HC |
chr8:36412954-36411351 | 20130731
Length = 515
Score = 241 bits (615), Expect = 8e-64, Method: Compositional matrix adjust.
Identities = 124/341 (36%), Positives = 208/341 (60%), Gaps = 7/341 (2%)
Query: 10 NAMLCGFVKDGDLSSARGVFDAMPEKNVVSFTTMIDGYAKAGDMAAARFLFEQATEKDVV 69
++++ F K + AR VFD +NVV +T+++ GY G + AR +F++ ++
Sbjct: 124 SSVINAFSKHSAIHLARQVFDECSNRNVVCWTSLVSGYCSCGLVNEARDVFDKMPLRNEA 183
Query: 70 AWSALISGYVQNGQPNQALKVFLEMESKN-----VKPDEFILVSLMSATSQLGHLELAQW 124
++SA++SGYV+NG ++ +++F E++ K+ +K + +LVS+++A + +G E +W
Sbjct: 184 SYSAMVSGYVRNGFFSEGVQLFRELKKKDKGCACLKFNGALLVSVLNACTMVGAFEEGKW 243
Query: 125 VDSYVSKSSIDLQQDHVIAALLDMNAKCGNMDRALKLFKEMPKRDLVSYCSMIQGLSIHG 184
+ SYV ++ ++ + + AL+D KCG + A K+F +MP +D+ ++ +MI GL+I+G
Sbjct: 244 IHSYVEENGLEYDLE-LGTALIDFYMKCGWVKGAEKVFNKMPVKDVATWSAMILGLAING 302
Query: 185 CGEDAVRLFNSMLMEGLVPDEVAFTIILTACSHSGLVDEGWNYFQSMKQKYGISPSPDHF 244
+ A+ LF M G P+EV F +LTAC+H L E F M +KY I+PS +H+
Sbjct: 303 NNKMALELFEKMEKVGPKPNEVTFVGVLTACNHKSLFGESARLFGIMSEKYNITPSIEHY 362
Query: 245 ACMVDLLSRSGHLGDAYELMKSMH-EPHAGAWGALLGACKLHGDSDLGEIVANQLFELEP 303
C+VD+L+RSG + A + SMH EP WG+LL C +HG +LG+ V L E EP
Sbjct: 363 GCVVDVLARSGQVKKALTFINSMHIEPDGAIWGSLLNGCLMHGHYELGQKVGKYLIEFEP 422
Query: 304 QNAANYILLSNIYAAAERWIDVSLVRSRMRERSVQKIPGCS 344
+++ Y+LL+N+YA +W VS VR M++R V + G S
Sbjct: 423 KHSGRYVLLANMYANMGKWEGVSEVRKLMKDRGVMIVSGWS 463
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 61/282 (21%), Positives = 115/282 (40%), Gaps = 37/282 (13%)
Query: 51 GDMAAARFLFEQATEKDVVAWSALISGYVQNGQPNQALKVFLEMESKNVKPDEFILVSLM 110
GD A LF ++ ++++I+ Y N Q ++ VF +M + N++P+ +L+
Sbjct: 36 GDFRYAETLFTHIPNPNIFDYNSIITSYTTNSQFHKLFFVFTKMLNTNIRPNSHTFTTLV 95
Query: 111 SATSQLGHLE--------LAQWVDSYVSKSSIDLQQDH-------------------VIA 143
A L LE L D Y S I+ H
Sbjct: 96 KACVSLSSLEQVFTLSMKLGNSSDVYFVSSVINAFSKHSAIHLARQVFDECSNRNVVCWT 155
Query: 144 ALLDMNAKCGNMDRALKLFKEMPKRDLVSYCSMIQGLSIHGCGEDAVRLFNSMLMEG--- 200
+L+ CG ++ A +F +MP R+ SY +M+ G +G + V+LF + +
Sbjct: 156 SLVSGYCSCGLVNEARDVFDKMPLRNEASYSAMVSGYVRNGFFSEGVQLFRELKKKDKGC 215
Query: 201 --LVPDEVAFTIILTACSHSGLVDEGWNYFQSMKQKYGISPSPDHFACMVDLLSRSGHLG 258
L + +L AC+ G +EG + S ++ G+ + ++D + G +
Sbjct: 216 ACLKFNGALLVSVLNACTMVGAFEEG-KWIHSYVEENGLEYDLELGTALIDFYMKCGWVK 274
Query: 259 DAYELMKSMHEPHAGAWGALLGACKLHGDSDLGEIVANQLFE 300
A ++ M W A++ ++G++ + A +LFE
Sbjct: 275 GAEKVFNKMPVKDVATWSAMILGLAINGNNKM----ALELFE 312
Score = 52.4 bits (124), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 46/182 (25%), Positives = 83/182 (45%), Gaps = 18/182 (9%)
Query: 1 MPQRNVASWNAMLCGFVKDGDLSSARGVFDAM----PEKNVVSFTTMIDGYAKAGDMAAA 56
MP ++VA+W+AM+ G +G+ A +F+ M P+ N V+F ++ +
Sbjct: 283 MPVKDVATWSAMILGLAINGNNKMALELFEKMEKVGPKPNEVTFVGVLTACNHKSLFGES 342
Query: 57 RFLFEQATEK-----DVVAWSALISGYVQNGQPNQALKVFLEMESKNVKPDEFILVSLMS 111
LF +EK + + ++ ++GQ +AL + S +++PD I SL++
Sbjct: 343 ARLFGIMSEKYNITPSIEHYGCVVDVLARSGQVKKALTF---INSMHIEPDGAIWGSLLN 399
Query: 112 ATSQLGHLELAQWVDSYVSKSSIDLQQDHV--IAALLDMNAKCGNMDRALKLFKEMPKRD 169
GH EL Q V Y+ I+ + H L +M A G + ++ K M R
Sbjct: 400 GCLMHGHYELGQKVGKYL----IEFEPKHSGRYVLLANMYANMGKWEGVSEVRKLMKDRG 455
Query: 170 LV 171
++
Sbjct: 456 VM 457
>Medtr2g042550.1 | pentatricopeptide (PPR) repeat protein | HC |
chr2:18562024-18564318 | 20130731
Length = 740
Score = 241 bits (615), Expect = 8e-64, Method: Compositional matrix adjust.
Identities = 120/328 (36%), Positives = 199/328 (60%), Gaps = 18/328 (5%)
Query: 33 PEKNVVSFTTMIDGYAKAGDMAAARFLFEQATEKDVVAWSALISGYVQNGQPN------- 85
P N V ++++ YAK G M +R++F++ E D+ W+ +++ Y ++ +
Sbjct: 284 PFDNFVQ-ASLLNFYAKYGKMCVSRYIFDRINEPDLATWNVILNAYARSSSYHSYSNSFD 342
Query: 86 ------QALKVFLEMESKNVKPDEFILVSLMSATSQLGHLELAQWVDSYVSKSSIDLQQD 139
++L +F +M+ ++P+E +V+L+SA S LG + WV +V ++ I + +
Sbjct: 343 DADFSLESLYLFRDMQVIGIRPNEVTIVALISACSNLGAVSQGFWVHCFVLRNKIKMNR- 401
Query: 140 HVIAALLDMNAKCGNMDRALKLFKEMPKRDLVSYC--SMIQGLSIHGCGEDAVRLFNSML 197
V A +DM +KCG ++ A ++F +MP+ D S+C +MI G ++HG G A+ L+ M
Sbjct: 402 FVGTAFVDMYSKCGCLNLACQVFDKMPENDRDSFCYTAMIGGFAVHGYGNQALELYRKMK 461
Query: 198 MEGLVPDEVAFTIILTACSHSGLVDEGWNYFQSMKQKYGISPSPDHFACMVDLLSRSGHL 257
+GLVPD F + + ACSH GLV+EG F+SMK+ +G+ P +H+ C++DLL R+G L
Sbjct: 462 FKGLVPDSATFVVTMFACSHVGLVEEGLEIFKSMKEVHGVEPKLEHYGCLIDLLGRAGRL 521
Query: 258 GDAYELMKSM-HEPHAGAWGALLGACKLHGDSDLGEIVANQLFELEPQNAANYILLSNIY 316
+A E + M +P+A W +LLGA ++HG+ +GE+ +L ELEP+ + NY+LLSN+Y
Sbjct: 522 KEAEEWLADMPMKPNAVLWRSLLGAARIHGNLGVGEVALTKLIELEPETSGNYVLLSNMY 581
Query: 317 AAAERWIDVSLVRSRMRERSVQKIPGCS 344
A+ R DV VR M+ V K+PG S
Sbjct: 582 ASVGRVNDVKRVRKLMKHHGVNKLPGFS 609
>Medtr2g024080.1 | PPR containing plant-like protein | HC |
chr2:8563899-8566215 | 20130731
Length = 767
Score = 241 bits (615), Expect = 8e-64, Method: Compositional matrix adjust.
Identities = 127/381 (33%), Positives = 211/381 (55%), Gaps = 41/381 (10%)
Query: 4 RNVASWNAMLCGFVKDGDLSSARGVFDAM------PEK---------------------- 35
++V W AM+ G V++ + A VFD M P
Sbjct: 332 KDVVLWTAMISGLVQNENADKALAVFDQMFKFGMKPSTETMASVITACAQLGAFNLGKSI 391
Query: 36 -----------NVVSFTTMIDGYAKAGDMAAARFLFEQATEKDVVAWSALISGYVQNGQP 84
+ + +++ YAK G + + +F++ +++D+V+W+A+++GY QNG
Sbjct: 392 HGYILRQKLSLDTAAHNSLVTMYAKCGHLDQSYIVFDRMSKRDLVSWNAIVAGYAQNGCV 451
Query: 85 NQALKVFLEMESKNVKPDEFILVSLMSATSQLGHLELAQWVDSYVSKSSIDLQQDHVIAA 144
+A +F EM S + PD +VSL+ + G L +W+ +V ++ + V +
Sbjct: 452 YKAFSLFNEMRSCHQTPDSITIVSLVQGCASTGQLHPGKWIHGFVIRNGLR-PCILVDTS 510
Query: 145 LLDMNAKCGNMDRALKLFKEMPKRDLVSYCSMIQGLSIHGCGEDAVRLFNSMLMEGLVPD 204
L+DM KCG++D A + F MP +DLVS+ ++I G HG GE A+RL++ L + P+
Sbjct: 511 LVDMYCKCGDLDSAQRCFNLMPSQDLVSWSAIIAGYGYHGKGETALRLYSKFLETRIKPN 570
Query: 205 EVAFTIILTACSHSGLVDEGWNYFQSMKQKYGISPSPDHFACMVDLLSRSGHLGDAYELM 264
V F IL++CSH+GL+D+G N ++SM + +G P+ +H ACMVDLL R+G + +AY L
Sbjct: 571 HVIFLSILSSCSHNGLIDQGLNIYESMTRDFGFVPNLEHHACMVDLLCRAGKVEEAYNLY 630
Query: 265 KSMH-EPHAGAWGALLGACKLHGDSDLGEIVANQLFELEPQNAANYILLSNIYAAAERWI 323
K M +P G +L AC+ +G+ +LG+I+AN + +L P +A NY+ L++ YA+ +W
Sbjct: 631 KRMFSDPVLDVLGIILDACRANGNKELGDIIANDIIKLRPMSAGNYVQLAHCYASINKWE 690
Query: 324 DVSLVRSRMRERSVQKIPGCS 344
V V + MR ++KIPG S
Sbjct: 691 GVGEVWTHMRSLGLRKIPGWS 711
Score = 132 bits (333), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 92/360 (25%), Positives = 163/360 (45%), Gaps = 43/360 (11%)
Query: 1 MPQRNVASWNAMLCGFVKDGDLSSARGVFDAMP----EKNVVSF---------------- 40
M +R+V SWN++L + + GDL + M E + +F
Sbjct: 228 MDRRDVVSWNSLLSAYAQIGDLCEVLLLLKRMKLQGLEPGLQAFGSVLSVAVSTGDMRLG 287
Query: 41 -------------------TTMIDGYAKAGDMAAARFLFEQATEKDVVAWSALISGYVQN 81
T+ I Y K G++ A +FE++ +KDVV W+A+ISG VQN
Sbjct: 288 RLVHGQILRGGFVLDAHIETSFIVMYLKGGNINVAFKMFERSLDKDVVLWTAMISGLVQN 347
Query: 82 GQPNQALKVFLEMESKNVKPDEFILVSLMSATSQLGHLELAQWVDSYVSKSSIDLQQDHV 141
++AL VF +M +KP + S+++A +QLG L + + Y+ + + L
Sbjct: 348 ENADKALAVFDQMFKFGMKPSTETMASVITACAQLGAFNLGKSIHGYILRQKLSLDTA-A 406
Query: 142 IAALLDMNAKCGNMDRALKLFKEMPKRDLVSYCSMIQGLSIHGCGEDAVRLFNSMLMEGL 201
+L+ M AKCG++D++ +F M KRDLVS+ +++ G + +GC A LFN M
Sbjct: 407 HNSLVTMYAKCGHLDQSYIVFDRMSKRDLVSWNAIVAGYAQNGCVYKAFSLFNEMRSCHQ 466
Query: 202 VPDEVAFTIILTACSHSGLVDEGWNYFQSMKQKYGISPSPDHFACMVDLLSRSGHLGDAY 261
PD + ++ C+ +G + G + + G+ P +VD+ + G L A
Sbjct: 467 TPDSITIVSLVQGCASTGQLHPG-KWIHGFVIRNGLRPCILVDTSLVDMYCKCGDLDSAQ 525
Query: 262 ELMKSMHEPHAGAWGALLGACKLHGDSDLGEIVANQLFELEPQNAANYILLSNIYAAAER 321
M +W A++ HG + + ++ LE + N+++ +I ++
Sbjct: 526 RCFNLMPSQDLVSWSAIIAGYGYHGKGETALRLYSKF--LETRIKPNHVIFLSILSSCSH 583
Score = 100 bits (249), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 75/323 (23%), Positives = 143/323 (44%), Gaps = 40/323 (12%)
Query: 1 MPQRNVASWNAMLCGFVKDGDLSSARGVFDAMPEKNV-------------VS-------- 39
MP+RNV W ++ + K GD+ A +F M + + VS
Sbjct: 130 MPERNVVPWTTVIGCYSKMGDVREAFSLFRQMRYEGIQPSSVTLLSLLFGVSEVPYVQCL 189
Query: 40 ---------------FTTMIDGYAKAGDMAAARFLFEQATEKDVVAWSALISGYVQNGQP 84
+M++ Y K G + R LFE +DVV+W++L+S Y Q G
Sbjct: 190 HGCAIFYGFMSDLNLLNSMVNLYGKCGSIEDCRKLFEFMDRRDVVSWNSLLSAYAQIGDL 249
Query: 85 NQALKVFLEMESKNVKPDEFILVSLMSATSQLGHLELAQWVDSYVSKSSIDLQQDHVIAA 144
+ L + M+ + ++P S++S G + L + V + + L H+ +
Sbjct: 250 CEVLLLLKRMKLQGLEPGLQAFGSVLSVAVSTGDMRLGRLVHGQILRGGFVLDA-HIETS 308
Query: 145 LLDMNAKCGNMDRALKLFKEMPKRDLVSYCSMIQGLSIHGCGEDAVRLFNSMLMEGLVPD 204
+ M K GN++ A K+F+ +D+V + +MI GL + + A+ +F+ M G+ P
Sbjct: 309 FIVMYLKGGNINVAFKMFERSLDKDVVLWTAMISGLVQNENADKALAVFDQMFKFGMKPS 368
Query: 205 EVAFTIILTACSHSGLVDEGWN-YFQSMKQKYGISPSPDHFACMVDLLSRSGHLGDAYEL 263
++TAC+ G + G + + ++QK + + + +V + ++ GHL +Y +
Sbjct: 369 TETMASVITACAQLGAFNLGKSIHGYILRQKLSLDTAAHN--SLVTMYAKCGHLDQSYIV 426
Query: 264 MKSMHEPHAGAWGALLGACKLHG 286
M + +W A++ +G
Sbjct: 427 FDRMSKRDLVSWNAIVAGYAQNG 449
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 57/262 (21%), Positives = 132/262 (50%), Gaps = 7/262 (2%)
Query: 41 TTMIDGYAKAGDMAAARFLFEQATEKDVVAWSALISGYVQNGQPNQALKVFLEMESKNVK 100
+++I+ Y K G AR +F+ E++VV W+ +I Y + G +A +F +M + ++
Sbjct: 108 SSLINFYVKFGYNDVARKVFDFMPERNVVPWTTVIGCYSKMGDVREAFSLFRQMRYEGIQ 167
Query: 101 PDEFILVSLMSATSQLGHLELAQWVDSYVSKSSIDLQQDHVIAALLDMNAKCGNMDRALK 160
P L+SL+ S++ +++ + S DL +++ +++++ KCG+++ K
Sbjct: 168 PSSVTLLSLLFGVSEVPYVQCLHGCAIFYGFMS-DL---NLLNSMVNLYGKCGSIEDCRK 223
Query: 161 LFKEMPKRDLVSYCSMIQGLSIHGCGEDAVRLFNSMLMEGLVPDEVAFTIILTACSHSGL 220
LF+ M +RD+VS+ S++ + G + + L M ++GL P AF +L+ +G
Sbjct: 224 LFEFMDRRDVVSWNSLLSAYAQIGDLCEVLLLLKRMKLQGLEPGLQAFGSVLSVAVSTGD 283
Query: 221 VDEG-WNYFQSMKQKYGISPSPDHFACMVDLLSRSGHLGDAYELMKSMHEPHAGAWGALL 279
+ G + Q ++ + + + + + + G++ A+++ + + W A++
Sbjct: 284 MRLGRLVHGQILRGGFVLDAHIE--TSFIVMYLKGGNINVAFKMFERSLDKDVVLWTAMI 341
Query: 280 GACKLHGDSDLGEIVANQLFEL 301
+ ++D V +Q+F+
Sbjct: 342 SGLVQNENADKALAVFDQMFKF 363
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 58/220 (26%), Positives = 95/220 (43%), Gaps = 9/220 (4%)
Query: 70 AWSALISGYVQNGQPNQALKVFLEMESKNVKPDEFILVSLMSATSQLGHLELAQWVDSYV 129
+++ALI+ + G Q L + M + N+ D + SL+ A S L L + V
Sbjct: 36 SYNALINRHSTQGAHRQVLITYTSMLNANIPSDAYTFPSLLKACSFLNLFHLGNSLHQRV 95
Query: 130 SKSSIDLQQDHVIAALLDMNAKCGNMDRALKLFKEMPKRDLVSYCSMIQGLSIHGCGEDA 189
+ + ++ ++L++ K G D A K+F MP+R++V + ++I S G +A
Sbjct: 96 IVNGLS-TDSYIASSLINFYVKFGYNDVARKVFDFMPERNVVPWTTVIGCYSKMGDVREA 154
Query: 190 VRLFNSMLMEGLVPDEVAFTIILTACSHSGLVD--EGWNYFQSMKQKYGISPSPDHFACM 247
LF M EG+ P V +L S V G F YG + M
Sbjct: 155 FSLFRQMRYEGIQPSSVTLLSLLFGVSEVPYVQCLHGCAIF------YGFMSDLNLLNSM 208
Query: 248 VDLLSRSGHLGDAYELMKSMHEPHAGAWGALLGACKLHGD 287
V+L + G + D +L + M +W +LL A GD
Sbjct: 209 VNLYGKCGSIEDCRKLFEFMDRRDVVSWNSLLSAYAQIGD 248
>Medtr3g096440.1 | PPR containing plant-like protein | HC |
chr3:44085648-44087691 | 20130731
Length = 580
Score = 241 bits (614), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 127/343 (37%), Positives = 212/343 (61%), Gaps = 6/343 (1%)
Query: 10 NAMLCGFVKDGDLSSARGVFDAMPEKNVVSFTTMIDGYAKAGDMAAARFLFEQATEKDVV 69
NA++ + K G+ +S+ +F +M EK+ VS+T+M+ Y +A + A +F + K V
Sbjct: 184 NALIDAYGKCGEPNSSFCLFRSMVEKDAVSWTSMVVTYTRASRIDDACKVFNEMPVKYTV 243
Query: 70 AWSALISGYVQNGQPNQALKVFLEMESKNVKPDEFILVSLMSATSQLGHLELAQWVDSYV 129
+W+ALISG+V+NG+ +AL+VF +M + V P VS++ A + + + V +
Sbjct: 244 SWAALISGFVKNGRCYEALEVFHQMIKEGVLPRAQTFVSVLDACASEALIGRGKQVHCQI 303
Query: 130 --SKSSIDLQQDHVIAALLDMNAKCGNMDRALKLFKEMPK-RDLVSYCSMIQGLSIHGCG 186
+SS +L +V AL+DM AKCG+M A LF+ M +D+VS+ ++I G + +G G
Sbjct: 304 IRGRSSDNLFNVYVFNALMDMYAKCGDMKSAENLFEMMIHVKDVVSWNTLITGFAQNGRG 363
Query: 187 EDAVRLFNSMLMEGLVPDEVAFTIILTACSHSGLVDEGWNYFQSMKQKYGISPSPDHFAC 246
ED++ +F+ M+ + P+ V F +L+AC+H+GLV+ G SM+++YG+ P +H+A
Sbjct: 364 EDSLAVFDRMIESNIEPNHVTFLGVLSACNHAGLVNAGLELLDSMERRYGVKPKSNHYAL 423
Query: 247 MVDLLSRSGHLGDAYELMKSMHEP---HAGAWGALLGACKLHGDSDLGEIVANQLFELEP 303
++DLL R L +A L++ + H WGA+LG C++HG+ +L A LF LEP
Sbjct: 424 LIDLLGRKNRLEEAMCLIEKVPNEISNHIAMWGAVLGGCRVHGNLELARKAAEALFALEP 483
Query: 304 QNAANYILLSNIYAAAERWIDVSLVRSRMRERSVQKIPGCSKL 346
+N Y++LSNIYAA+ RW D + +R+ M+ER ++K P S++
Sbjct: 484 ENTGRYVMLSNIYAASGRWSDTNRIRNVMKERGLKKEPAFSRI 526
Score = 99.4 bits (246), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 87/349 (24%), Positives = 162/349 (46%), Gaps = 53/349 (15%)
Query: 10 NAMLCGFVKDGDLSSARGVFDAMPEKNVVSFTTMIDGYAKAGDMAAARFLFEQATEKDVV 69
N ++ + K G S FD +P K ++ T++ Y+K G A LF++ ++++V
Sbjct: 50 NGLIDLYSKCGCKESIHKAFDDLPNKTTRTWNTLLSFYSKKGVFNQAYKLFDEMPQRNLV 109
Query: 70 AWSALISGYVQNGQPNQALKVFLEMES--KNVKPDEFILVSLMSATSQLGHLELAQWVDS 127
++++LISG ++ +A+K F EM++ + DEF LVSL+S S L+ +W+
Sbjct: 110 SYNSLISGLTRHEFHKEAVKFFREMQNGVGGLMLDEFTLVSLVSNCSC---LDTVKWLRQ 166
Query: 128 YVSKSSIDLQQDHVI--AALLDMNAKCG-------------------------------N 154
++I + ++I AL+D KCG
Sbjct: 167 VHGVATIVGFRTNLILNNALIDAYGKCGEPNSSFCLFRSMVEKDAVSWTSMVVTYTRASR 226
Query: 155 MDRALKLFKEMPKRDLVSYCSMIQGLSIHGCGEDAVRLFNSMLMEGLVPDEVAFTIILTA 214
+D A K+F EMP + VS+ ++I G +G +A+ +F+ M+ EG++P F +L A
Sbjct: 227 IDDACKVFNEMPVKYTVSWAALISGFVKNGRCYEALEVFHQMIKEGVLPRAQTFVSVLDA 286
Query: 215 CSHSGLVDEGWN-YFQSMKQKYGISPSPDH------FACMVDLLSRSGHLGDAYELMKSM 267
C+ L+ G + Q ++ + S D+ F ++D+ ++ G + A L + M
Sbjct: 287 CASEALIGRGKQVHCQIIRGR-----SSDNLFNVYVFNALMDMYAKCGDMKSAENLFEMM 341
Query: 268 -HEPHAGAWGALLGACKLHGDSDLGEIVANQLFE--LEPQNAANYILLS 313
H +W L+ +G + V +++ E +EP + +LS
Sbjct: 342 IHVKDVVSWNTLITGFAQNGRGEDSLAVFDRMIESNIEPNHVTFLGVLS 390
>Medtr7g417770.1 | PPR containing plant-like protein | HC |
chr7:5697167-5694522 | 20130731
Length = 881
Score = 240 bits (613), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 118/306 (38%), Positives = 187/306 (61%), Gaps = 4/306 (1%)
Query: 41 TTMIDGYAKAGDMAAARFLFEQATEKDVVAWSALISGYVQNGQPNQALKVFLEMESKNVK 100
+ +ID Y K G + A + E+ E+ V+W+++ISG+ Q AL F M V
Sbjct: 512 SAIIDMYCKCGMLVEAEKIHERLEERTTVSWNSIISGFSSEKQGENALSYFSRMLQVGVI 571
Query: 101 PDEFILVSLMSATSQLGHLELAQWVDSYVSKSSIDLQQDHVIAA-LLDMNAKCGNMDRAL 159
PD F +++ + L +EL + + + K + L D IA+ ++DM +KCGNM +
Sbjct: 572 PDNFTYATVLDICANLATVELGKQIHGQILK--LQLHSDVYIASTIVDMYSKCGNMQDSR 629
Query: 160 KLFKEMPKRDLVSYCSMIQGLSIHGCGEDAVRLFNSMLMEGLVPDEVAFTIILTACSHSG 219
+F++ PKRD V++ +MI + HG GEDA++LF M ++ + P+ F +L AC+H G
Sbjct: 630 IMFEKAPKRDYVTWSAMICAYAYHGLGEDAIKLFEEMQLQNVKPNHTIFISVLRACAHMG 689
Query: 220 LVDEGWNYFQSMKQKYGISPSPDHFACMVDLLSRSGHLGDAYELMKSM-HEPHAGAWGAL 278
VD+G +YF+ M+ YG+ P +H++CMVDLL RSG + +A EL++SM E W L
Sbjct: 690 FVDKGLHYFREMRSHYGLDPQMEHYSCMVDLLGRSGQVNEALELIESMPFEADDVIWRTL 749
Query: 279 LGACKLHGDSDLGEIVANQLFELEPQNAANYILLSNIYAAAERWIDVSLVRSRMRERSVQ 338
LG C+L G+ ++ E AN L +L+PQ+++ Y+LLSN+YA A W +V+ +RS M+ ++
Sbjct: 750 LGICRLQGNVEVAEKAANSLLQLDPQDSSAYVLLSNVYAIAGMWGEVAKIRSFMKNYKLK 809
Query: 339 KIPGCS 344
K PGCS
Sbjct: 810 KEPGCS 815
Score = 116 bits (291), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 74/272 (27%), Positives = 139/272 (51%), Gaps = 6/272 (2%)
Query: 10 NAMLCGFVKDGDLSSARGVFDAMPEKNVVSFTTMIDGYAKAGDMAAARFLFEQATEKDVV 69
N +L + K +L+ A VFD MP+++V+S+ TMI GYA G+M A+FLF+ E+DVV
Sbjct: 77 NCLLQFYCKCLNLNYAFNVFDKMPQRDVISWNTMIFGYAGVGNMEFAQFLFDSMPERDVV 136
Query: 70 AWSALISGYVQNGQPNQALKVFLEMESKNVKPDEFILVSLMSATSQLGHLELAQWVDSYV 129
+W++++S Y+QNG +++++F +M ++ D ++ A + + L V
Sbjct: 137 SWNSMLSCYLQNGFHRKSIEIFTKMRLLEIQHDYATFAVVLKACTGIEDYGLGLQVHCLA 196
Query: 130 SKSSIDLQQDHVI-AALLDMNAKCGNMDRALKLFKEMPKRDLVSYCSMIQGLSIHGCGED 188
+ D D V AL+DM + C +D A +F EMP+R+ V + ++I G + +
Sbjct: 197 IQMGFD--SDVVTGTALVDMYSTCKKLDHAFNIFCEMPERNSVCWSAVIAGYVRNDRFTE 254
Query: 189 AVRLFNSMLMEGLVPDEVAFTIILTACSHSGLVDEGWN-YFQSMKQKYGISPSPDHFACM 247
++L+ ML EG+ + F +C+ + G + ++K +G
Sbjct: 255 GLKLYKVMLDEGMGVSQATFASAFRSCAGLSAFELGTQLHAYALKTNFGYDNIVG--TAT 312
Query: 248 VDLLSRSGHLGDAYELMKSMHEPHAGAWGALL 279
+D+ ++ + DA ++ + P + AL+
Sbjct: 313 LDMYAKCDRMVDARKVFNTFPNPTRQSHNALI 344
Score = 115 bits (288), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 82/288 (28%), Positives = 143/288 (49%), Gaps = 11/288 (3%)
Query: 36 NVVSFTTMIDGYAKAGDMAAARFLFEQATEKDVVAWSALISGYVQNGQPNQALKVFLEME 95
N+ T++D YAK G + A +F+ KD V+W+A+I+ + QN + L +F+ M
Sbjct: 406 NICVANTILDMYAKCGALMEACLIFDDMEIKDAVSWNAIIAAHEQNEHVEETLALFVSML 465
Query: 96 SKNVKPDEFILVSLMSATSQLGHLELAQWVDSYVSKSSIDLQQDHVIAALLDMNAKCGNM 155
++PD++ S++ A + L V V KS + L V +A++DM KCG +
Sbjct: 466 RSTMEPDDYTFGSVVKACAGKKALNYGMEVHGRVIKSGMGLDW-FVGSAIIDMYCKCGML 524
Query: 156 DRALKLFKEMPKRDLVSYCSMIQGLSIHGCGEDAVRLFNSMLMEGLVPDEVAFTIILTAC 215
A K+ + + +R VS+ S+I G S GE+A+ F+ ML G++PD + +L C
Sbjct: 525 VEAEKIHERLEERTTVSWNSIISGFSSEKQGENALSYFSRMLQVGVIPDNFTYATVLDIC 584
Query: 216 SHSGLVDEGWNYFQSMKQKYGISPSPDHF--ACMVDLLSRSGHLGDAYELMKSMHEPHAG 273
++ V+ G Q Q + D + + +VD+ S+ G++ D+ + + +
Sbjct: 585 ANLATVELGK---QIHGQILKLQLHSDVYIASTIVDMYSKCGNMQDSRIMFEKAPKRDYV 641
Query: 274 AWGALLGACKLHGDSDLGEIVANQLFELEPQNAA--NYILLSNIYAAA 319
W A++ A HG LGE E++ QN + I +S + A A
Sbjct: 642 TWSAMICAYAYHG---LGEDAIKLFEEMQLQNVKPNHTIFISVLRACA 686
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 78/321 (24%), Positives = 142/321 (44%), Gaps = 43/321 (13%)
Query: 1 MPQRNVASWNAMLCGFVKDGDLSSARGVFDAMP--------------------------- 33
MP+R+V SWN+ML ++++G + +F M
Sbjct: 130 MPERDVVSWNSMLSCYLQNGFHRKSIEIFTKMRLLEIQHDYATFAVVLKACTGIEDYGLG 189
Query: 34 ------------EKNVVSFTTMIDGYAKAGDMAAARFLFEQATEKDVVAWSALISGYVQN 81
+ +VV+ T ++D Y+ + A +F + E++ V WSA+I+GYV+N
Sbjct: 190 LQVHCLAIQMGFDSDVVTGTALVDMYSTCKKLDHAFNIFCEMPERNSVCWSAVIAGYVRN 249
Query: 82 GQPNQALKVFLEMESKNVKPDEFILVSLMSATSQLGHLELAQWVDSYVSKSSIDLQQDHV 141
+ + LK++ M + + + S + + L EL + +Y K+ + D++
Sbjct: 250 DRFTEGLKLYKVMLDEGMGVSQATFASAFRSCAGLSAFELGTQLHAYALKT--NFGYDNI 307
Query: 142 I-AALLDMNAKCGNMDRALKLFKEMPKRDLVSYCSMIQGLSIHGCGEDAVRLFNSMLMEG 200
+ A LDM AKC M A K+F P S+ ++I G + +A+ +F S+
Sbjct: 308 VGTATLDMYAKCDRMVDARKVFNTFPNPTRQSHNALIVGYARQDQVLEALEIFRSLQKSY 367
Query: 201 LVPDEVAFTIILTACSHSGLVDEGWNYFQSMKQKYGISPSPDHFACMVDLLSRSGHLGDA 260
L DE++ + LTACS EG + K G+ + ++D+ ++ G L +A
Sbjct: 368 LDFDEISLSGALTACSAIKGYLEGIQ-LHGLAVKCGLDFNICVANTILDMYAKCGALMEA 426
Query: 261 YELMKSMHEPHAGAWGALLGA 281
+ M A +W A++ A
Sbjct: 427 CLIFDDMEIKDAVSWNAIIAA 447
Score = 85.5 bits (210), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 77/323 (23%), Positives = 143/323 (44%), Gaps = 51/323 (15%)
Query: 1 MPQRNVASWNAMLCGFVKDGDLSSARGVFDAMPEK------------------------- 35
MP+RN W+A++ G+V++ + ++ M ++
Sbjct: 231 MPERNSVCWSAVIAGYVRNDRFTEGLKLYKVMLDEGMGVSQATFASAFRSCAGLSAFELG 290
Query: 36 ---------------NVVSFTTMIDGYAKAGDMAAARFLFEQATEKDVVAWSALISGYVQ 80
N+V T +D YAK M AR +F + +ALI GY +
Sbjct: 291 TQLHAYALKTNFGYDNIVG-TATLDMYAKCDRMVDARKVFNTFPNPTRQSHNALIVGYAR 349
Query: 81 NGQPNQALKVFLEMESKNVKPDEFILVSLMSATSQL-GHLELAQWVDSYVSKSSIDLQQD 139
Q +AL++F ++ + DE L ++A S + G+LE Q + K +D
Sbjct: 350 QDQVLEALEIFRSLQKSYLDFDEISLSGALTACSAIKGYLEGIQ-LHGLAVKCGLDFNI- 407
Query: 140 HVIAALLDMNAKCGNMDRALKLFKEMPKRDLVSYCSMIQGLSIHGCGEDAVRLFNSMLME 199
V +LDM AKCG + A +F +M +D VS+ ++I + E+ + LF SML
Sbjct: 408 CVANTILDMYAKCGALMEACLIFDDMEIKDAVSWNAIIAAHEQNEHVEETLALFVSMLRS 467
Query: 200 GLVPDEVAFTIILTACSHSGLVDEGWN-YFQSMKQKYGISPSPDHF--ACMVDLLSRSGH 256
+ PD+ F ++ AC+ ++ G + + +K G+ D F + ++D+ + G
Sbjct: 468 TMEPDDYTFGSVVKACAGKKALNYGMEVHGRVIKSGMGL----DWFVGSAIIDMYCKCGM 523
Query: 257 LGDAYELMKSMHEPHAGAWGALL 279
L +A ++ + + E +W +++
Sbjct: 524 LVEAEKIHERLEERTTVSWNSII 546
>Medtr7g017700.1 | PPR containing plant-like protein | HC |
chr7:5672185-5669078 | 20130731
Length = 881
Score = 240 bits (613), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 118/306 (38%), Positives = 187/306 (61%), Gaps = 4/306 (1%)
Query: 41 TTMIDGYAKAGDMAAARFLFEQATEKDVVAWSALISGYVQNGQPNQALKVFLEMESKNVK 100
+ +ID Y K G + A + E+ E+ V+W+++ISG+ Q AL F M V
Sbjct: 512 SAIIDMYCKCGMLVEAEKIHERLEERTTVSWNSIISGFSSEKQGENALSYFSRMLQVGVI 571
Query: 101 PDEFILVSLMSATSQLGHLELAQWVDSYVSKSSIDLQQDHVIAA-LLDMNAKCGNMDRAL 159
PD F +++ + L +EL + + + K + L D IA+ ++DM +KCGNM +
Sbjct: 572 PDNFTYATVLDICANLATVELGKQIHGQILK--LQLHSDVYIASTIVDMYSKCGNMQDSR 629
Query: 160 KLFKEMPKRDLVSYCSMIQGLSIHGCGEDAVRLFNSMLMEGLVPDEVAFTIILTACSHSG 219
+F++ PKRD V++ +MI + HG GEDA++LF M ++ + P+ F +L AC+H G
Sbjct: 630 IMFEKAPKRDYVTWSAMICAYAYHGLGEDAIKLFEEMQLQNVKPNHTIFISVLRACAHMG 689
Query: 220 LVDEGWNYFQSMKQKYGISPSPDHFACMVDLLSRSGHLGDAYELMKSM-HEPHAGAWGAL 278
VD+G +YF+ M+ YG+ P +H++CMVDLL RSG + +A EL++SM E W L
Sbjct: 690 FVDKGLHYFREMRSHYGLDPQMEHYSCMVDLLGRSGQVNEALELIESMPFEADDVIWRTL 749
Query: 279 LGACKLHGDSDLGEIVANQLFELEPQNAANYILLSNIYAAAERWIDVSLVRSRMRERSVQ 338
LG C+L G+ ++ E AN L +L+PQ+++ Y+LLSN+YA A W +V+ +RS M+ ++
Sbjct: 750 LGICRLQGNVEVAEKAANSLLQLDPQDSSAYVLLSNVYAIAGMWGEVAKIRSFMKNYKLK 809
Query: 339 KIPGCS 344
K PGCS
Sbjct: 810 KEPGCS 815
Score = 116 bits (291), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 74/272 (27%), Positives = 139/272 (51%), Gaps = 6/272 (2%)
Query: 10 NAMLCGFVKDGDLSSARGVFDAMPEKNVVSFTTMIDGYAKAGDMAAARFLFEQATEKDVV 69
N +L + K +L+ A VFD MP+++V+S+ TMI GYA G+M A+FLF+ E+DVV
Sbjct: 77 NCLLQFYCKCLNLNYAFNVFDKMPQRDVISWNTMIFGYAGVGNMEFAQFLFDSMPERDVV 136
Query: 70 AWSALISGYVQNGQPNQALKVFLEMESKNVKPDEFILVSLMSATSQLGHLELAQWVDSYV 129
+W++++S Y+QNG +++++F +M ++ D ++ A + + L V
Sbjct: 137 SWNSMLSCYLQNGFHRKSIEIFTKMRLLEIQHDYATFAVVLKACTGIEDYGLGLQVHCLA 196
Query: 130 SKSSIDLQQDHVI-AALLDMNAKCGNMDRALKLFKEMPKRDLVSYCSMIQGLSIHGCGED 188
+ D D V AL+DM + C +D A +F EMP+R+ V + ++I G + +
Sbjct: 197 IQMGFD--SDVVTGTALVDMYSTCKKLDHAFNIFCEMPERNSVCWSAVIAGYVRNDRFTE 254
Query: 189 AVRLFNSMLMEGLVPDEVAFTIILTACSHSGLVDEGWN-YFQSMKQKYGISPSPDHFACM 247
++L+ ML EG+ + F +C+ + G + ++K +G
Sbjct: 255 GLKLYKVMLDEGMGVSQATFASAFRSCAGLSAFELGTQLHAYALKTNFGYDNIVG--TAT 312
Query: 248 VDLLSRSGHLGDAYELMKSMHEPHAGAWGALL 279
+D+ ++ + DA ++ + P + AL+
Sbjct: 313 LDMYAKCDRMVDARKVFNTFPNPTRQSHNALI 344
Score = 115 bits (288), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 82/288 (28%), Positives = 143/288 (49%), Gaps = 11/288 (3%)
Query: 36 NVVSFTTMIDGYAKAGDMAAARFLFEQATEKDVVAWSALISGYVQNGQPNQALKVFLEME 95
N+ T++D YAK G + A +F+ KD V+W+A+I+ + QN + L +F+ M
Sbjct: 406 NICVANTILDMYAKCGALMEACLIFDDMEIKDAVSWNAIIAAHEQNEHVEETLALFVSML 465
Query: 96 SKNVKPDEFILVSLMSATSQLGHLELAQWVDSYVSKSSIDLQQDHVIAALLDMNAKCGNM 155
++PD++ S++ A + L V V KS + L V +A++DM KCG +
Sbjct: 466 RSTMEPDDYTFGSVVKACAGKKALNYGMEVHGRVIKSGMGLDW-FVGSAIIDMYCKCGML 524
Query: 156 DRALKLFKEMPKRDLVSYCSMIQGLSIHGCGEDAVRLFNSMLMEGLVPDEVAFTIILTAC 215
A K+ + + +R VS+ S+I G S GE+A+ F+ ML G++PD + +L C
Sbjct: 525 VEAEKIHERLEERTTVSWNSIISGFSSEKQGENALSYFSRMLQVGVIPDNFTYATVLDIC 584
Query: 216 SHSGLVDEGWNYFQSMKQKYGISPSPDHF--ACMVDLLSRSGHLGDAYELMKSMHEPHAG 273
++ V+ G Q Q + D + + +VD+ S+ G++ D+ + + +
Sbjct: 585 ANLATVELGK---QIHGQILKLQLHSDVYIASTIVDMYSKCGNMQDSRIMFEKAPKRDYV 641
Query: 274 AWGALLGACKLHGDSDLGEIVANQLFELEPQNAA--NYILLSNIYAAA 319
W A++ A HG LGE E++ QN + I +S + A A
Sbjct: 642 TWSAMICAYAYHG---LGEDAIKLFEEMQLQNVKPNHTIFISVLRACA 686
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 78/321 (24%), Positives = 142/321 (44%), Gaps = 43/321 (13%)
Query: 1 MPQRNVASWNAMLCGFVKDGDLSSARGVFDAMP--------------------------- 33
MP+R+V SWN+ML ++++G + +F M
Sbjct: 130 MPERDVVSWNSMLSCYLQNGFHRKSIEIFTKMRLLEIQHDYATFAVVLKACTGIEDYGLG 189
Query: 34 ------------EKNVVSFTTMIDGYAKAGDMAAARFLFEQATEKDVVAWSALISGYVQN 81
+ +VV+ T ++D Y+ + A +F + E++ V WSA+I+GYV+N
Sbjct: 190 LQVHCLAIQMGFDSDVVTGTALVDMYSTCKKLDHAFNIFCEMPERNSVCWSAVIAGYVRN 249
Query: 82 GQPNQALKVFLEMESKNVKPDEFILVSLMSATSQLGHLELAQWVDSYVSKSSIDLQQDHV 141
+ + LK++ M + + + S + + L EL + +Y K+ + D++
Sbjct: 250 DRFTEGLKLYKVMLDEGMGVSQATFASAFRSCAGLSAFELGTQLHAYALKT--NFGYDNI 307
Query: 142 I-AALLDMNAKCGNMDRALKLFKEMPKRDLVSYCSMIQGLSIHGCGEDAVRLFNSMLMEG 200
+ A LDM AKC M A K+F P S+ ++I G + +A+ +F S+
Sbjct: 308 VGTATLDMYAKCDRMVDARKVFNTFPNPTRQSHNALIVGYARQDQVLEALEIFRSLQKSY 367
Query: 201 LVPDEVAFTIILTACSHSGLVDEGWNYFQSMKQKYGISPSPDHFACMVDLLSRSGHLGDA 260
L DE++ + LTACS EG + K G+ + ++D+ ++ G L +A
Sbjct: 368 LDFDEISLSGALTACSAIKGYLEGIQ-LHGLAVKCGLDFNICVANTILDMYAKCGALMEA 426
Query: 261 YELMKSMHEPHAGAWGALLGA 281
+ M A +W A++ A
Sbjct: 427 CLIFDDMEIKDAVSWNAIIAA 447
Score = 85.5 bits (210), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 77/323 (23%), Positives = 143/323 (44%), Gaps = 51/323 (15%)
Query: 1 MPQRNVASWNAMLCGFVKDGDLSSARGVFDAMPEK------------------------- 35
MP+RN W+A++ G+V++ + ++ M ++
Sbjct: 231 MPERNSVCWSAVIAGYVRNDRFTEGLKLYKVMLDEGMGVSQATFASAFRSCAGLSAFELG 290
Query: 36 ---------------NVVSFTTMIDGYAKAGDMAAARFLFEQATEKDVVAWSALISGYVQ 80
N+V T +D YAK M AR +F + +ALI GY +
Sbjct: 291 TQLHAYALKTNFGYDNIVG-TATLDMYAKCDRMVDARKVFNTFPNPTRQSHNALIVGYAR 349
Query: 81 NGQPNQALKVFLEMESKNVKPDEFILVSLMSATSQL-GHLELAQWVDSYVSKSSIDLQQD 139
Q +AL++F ++ + DE L ++A S + G+LE Q + K +D
Sbjct: 350 QDQVLEALEIFRSLQKSYLDFDEISLSGALTACSAIKGYLEGIQ-LHGLAVKCGLDFNI- 407
Query: 140 HVIAALLDMNAKCGNMDRALKLFKEMPKRDLVSYCSMIQGLSIHGCGEDAVRLFNSMLME 199
V +LDM AKCG + A +F +M +D VS+ ++I + E+ + LF SML
Sbjct: 408 CVANTILDMYAKCGALMEACLIFDDMEIKDAVSWNAIIAAHEQNEHVEETLALFVSMLRS 467
Query: 200 GLVPDEVAFTIILTACSHSGLVDEGWN-YFQSMKQKYGISPSPDHF--ACMVDLLSRSGH 256
+ PD+ F ++ AC+ ++ G + + +K G+ D F + ++D+ + G
Sbjct: 468 TMEPDDYTFGSVVKACAGKKALNYGMEVHGRVIKSGMGL----DWFVGSAIIDMYCKCGM 523
Query: 257 LGDAYELMKSMHEPHAGAWGALL 279
L +A ++ + + E +W +++
Sbjct: 524 LVEAEKIHERLEERTTVSWNSII 546
>Medtr8g089940.1 | pentatricopeptide (PPR) repeat protein | HC |
chr8:37579244-37581349 | 20130731
Length = 701
Score = 240 bits (613), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 135/378 (35%), Positives = 212/378 (56%), Gaps = 39/378 (10%)
Query: 3 QRNVASWNAMLCGFVKDGDLSSARGVFDAMPEKNVVSFTTMIDGYAK------------- 49
++NV WNA+ + K GD+ AR +FD M KN+VS+ MI GY K
Sbjct: 195 EKNVFVWNAVTDLYAKCGDIDRARWLFDGMVNKNLVSWNLMISGYVKMGKPDECISFFNK 254
Query: 50 ----------------------AGDMAAARFLFEQATEKDVVAWSALISGYVQNGQPNQA 87
+G + AR +F++ +KD + W+ +I GY Q+G+ A
Sbjct: 255 MQLSGLKPDQVTVSSVLNAYFQSGRVDDARNMFDKIDKKDEICWTTMIVGYAQSGREEDA 314
Query: 88 LKVFLEMESKNVKPDEFILVSLMSATSQLGHLELAQWVDSYVSKSSIDLQQDHVIAALLD 147
L +F EM NV+PD + +++S+ ++L L Q V V +D V +AL+D
Sbjct: 315 LMLFSEMLRGNVRPDSHTISTVVSSCAKLASLYHGQAVHGKVILMGVDSNM-LVSSALVD 373
Query: 148 MNAKCGNMDRALKLFKEMPKRDLVSYCSMIQGLSIHGCGEDAVRLFNSMLMEGLVPDEVA 207
M KCG A +F+ MP ++++ + SMI G + +G E+A+ L+ ML E PD ++
Sbjct: 374 MYCKCGVPLDARVIFETMPIKNVIIWNSMILGYAQNGEAEEALTLYERMLQENFKPDNIS 433
Query: 208 FTIILTACSHSGLVDEGWNYFQSMKQKYGISPSPDHFACMVDLLSRSGHLGDAYELMKSM 267
F +L+AC ++ +V EG +F S+ ++ G++P+ DH+ACM+ LL RSG++ A +L+K M
Sbjct: 434 FVGVLSACINTNMVKEGRKHFDSISEQ-GMTPTLDHYACMIILLGRSGNIDKALDLIKGM 492
Query: 268 -HEPHAGAWGALLGACKLHGDSDLGEIVANQLFELEPQNAANYILLSNIYAAAERWIDVS 326
H+P W ALL C GD E+ AN +F+L+P NA +YI+LSN+YAA RW DV+
Sbjct: 493 PHKPDCRIWSALLSVCS-KGDIKTAEVAANHIFQLDPHNAGSYIMLSNLYAACGRWKDVA 551
Query: 327 LVRSRMRERSVQKIPGCS 344
+VRS M+ ++ +K S
Sbjct: 552 VVRSLMKSKNAKKFSAYS 569
Score = 125 bits (314), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 80/294 (27%), Positives = 148/294 (50%), Gaps = 15/294 (5%)
Query: 10 NAMLCGFVKDGDLSSARGVFDAMPEKNVVSFTTMIDGYAKAGDMAAARFLFEQATEKDVV 69
N +L + K G +S A+ +FD M ++++ S+ ++ YAK G + +F++ +D V
Sbjct: 70 NQLLHLYAKCGKISDAQQLFDKMSKRDIYSWNALLSAYAKVGLVEDLNLVFDRMACRDSV 129
Query: 70 AWSALISGYVQNGQPNQALKVFLEMESKNVKPDEFILVSLMSATSQLGHLELAQWVDSYV 129
+++ +I+ + N +AL+ F+ M+ +P ++ V+ + A SQL L + + V
Sbjct: 130 SYNTMIACFASNWLSGKALRFFVRMQEDGFRPTQYSYVNALQACSQLLDFRLGKQIHGRV 189
Query: 130 SKSSIDLQQDHVIAALLDMNAKCGNMDRALKLFKEMPKRDLVSYCSMIQGLSIHGCGEDA 189
+ + V A+ D+ AKCG++DRA LF M ++LVS+ MI G G ++
Sbjct: 190 VVGEFE-KNVFVWNAVTDLYAKCGDIDRARWLFDGMVNKNLVSWNLMISGYVKMGKPDEC 248
Query: 190 VRLFNSMLMEGLVPDEVAFTIILTACSHSGLVDEGWNYFQSMKQKYGISPSPDHFACMVD 249
+ FN M + GL PD+V + +L A SG VD+ N F + +K I + M+
Sbjct: 249 ISFFNKMQLSGLKPDQVTVSSVLNAYFQSGRVDDARNMFDKIDKKDEIC-----WTTMIV 303
Query: 250 LLSRSGHLGDAY----ELMKSMHEPHAGAWGALLGACK-----LHGDSDLGEIV 294
++SG DA E+++ P + ++ +C HG + G+++
Sbjct: 304 GYAQSGREEDALMLFSEMLRGNVRPDSHTISTVVSSCAKLASLYHGQAVHGKVI 357
>Medtr1g014340.1 | PPR containing plant-like protein | HC |
chr1:3000992-3003085 | 20130731
Length = 697
Score = 240 bits (612), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 133/385 (34%), Positives = 210/385 (54%), Gaps = 42/385 (10%)
Query: 1 MPQRNVASWNAMLCGFVKDGDLSSARGVFDAMPEKNVVSF-------------------- 40
MP + V +WN+M+ G+ GD S +F M + V
Sbjct: 268 MPNKTVVAWNSMINGYGFKGDGISCIQLFKRMYSEGVKPTLTTLTSTLMACSQSAQLLEG 327
Query: 41 -------------------TTMIDGYAKAGDMAAARFLFEQATEKDVVAWSALISGYVQN 81
++++D Y K G + +A +F+ + V+W+ +ISGYV
Sbjct: 328 KFVHGYIIRNRIQPDIFLNSSLMDLYFKCGKVESAETIFKLMPKTTTVSWNVMISGYVTE 387
Query: 82 GQPNQALKVFLEMESKNVKPDEFILVSLMSATSQLGHLELAQWVDSYVSKSSIDLQQDHV 141
G+ AL++F EM V+PD S+++A SQL LE + + + + + ++ + V
Sbjct: 388 GKLFDALRLFGEMSKSFVEPDAITFTSVLAACSQLAALEKGREIHNLIVERNLG-NNEVV 446
Query: 142 IAALLDMNAKCGNMDRALKLFKEMPKRDLVSYCSMIQGLSIHGCGEDAVRLFNSMLMEGL 201
+ ALLDM AKCG ++ A +FK +P+RDLVS+ SMI HG +A+ LF ML +
Sbjct: 447 MGALLDMYAKCGAVEEAFGVFKCLPERDLVSWTSMITAYGSHGRVYEALELFAEMLQSNV 506
Query: 202 VPDEVAFTIILTACSHSGLVDEGWNYFQSMKQKYGISPSPDHFACMVDLLSRSGHLGDAY 261
PD V F IL+ACSH+GLVD+G +F M YGI P +H++C++ LL R+G L +AY
Sbjct: 507 KPDRVTFLAILSACSHAGLVDDGLYHFNQMINVYGIIPRIEHYSCLITLLGRAGRLHEAY 566
Query: 262 ELMKSMHE--PHAGAWGALLGACKLHGDSDLGEIVANQLFELEPQNAANYILLSNIYAAA 319
E+++S E L AC+LH + DLG +A L + +P +++ YI+LSN+YA+
Sbjct: 567 EILQSNPEISDDFQLLSTLFSACRLHKNLDLGVEIAENLIDKDPDDSSTYIILSNMYASF 626
Query: 320 ERWIDVSLVRSRMRERSVQKIPGCS 344
+W +V +VRS+M++ ++K PGCS
Sbjct: 627 GKWDEVRMVRSKMKDLGLKKNPGCS 651
Score = 112 bits (280), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 69/244 (28%), Positives = 125/244 (51%), Gaps = 2/244 (0%)
Query: 36 NVVSFTTMIDGYAKAGDMAAARFLFEQATEKDVVAWSALISGYVQNGQPNQALKVFLEME 95
++V ++++ YAK + A LF++ +KDV W+ +IS Y Q+G+ +AL+ F M
Sbjct: 140 DIVVGSSLVGMYAKCNEFECAVKLFDEMPDKDVACWNTVISCYYQSGKFEEALRYFGMMR 199
Query: 96 SKNVKPDEFILVSLMSATSQLGHLELAQWVDSYVSKSSIDLQQDHVIAALLDMNAKCGNM 155
+PD + + +S+ ++L L+ + + + S + V AAL+DM KCG +
Sbjct: 200 RFGFEPDSVTITTAISSCARLLDLDRGREIHKELVNSGFRMDS-FVSAALVDMYGKCGQL 258
Query: 156 DRALKLFKEMPKRDLVSYCSMIQGLSIHGCGEDAVRLFNSMLMEGLVPDEVAFTIILTAC 215
+ A+++F++MP + +V++ SMI G G G ++LF M EG+ P T L AC
Sbjct: 259 EMAIEVFEQMPNKTVVAWNSMINGYGFKGDGISCIQLFKRMYSEGVKPTLTTLTSTLMAC 318
Query: 216 SHSGLVDEGWNYFQSMKQKYGISPSPDHFACMVDLLSRSGHLGDAYELMKSMHEPHAGAW 275
S S + EG + + I P + ++DL + G + A + K M + +W
Sbjct: 319 SQSAQLLEG-KFVHGYIIRNRIQPDIFLNSSLMDLYFKCGKVESAETIFKLMPKTTTVSW 377
Query: 276 GALL 279
++
Sbjct: 378 NVMI 381
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 65/231 (28%), Positives = 110/231 (47%), Gaps = 9/231 (3%)
Query: 72 SALISGYVQNGQPNQALKVFLE-MESKNVKPDEFILVSLMSATSQLGHLELAQWVDSYVS 130
+ L++GY +N ++AL +F + M +KPD + S++ A L + L Q + + +
Sbjct: 74 NGLMAGYTRNCMYDEALGLFDKLMCYPCLKPDSYTYPSVLKACGGLRRVVLGQMIHTCLV 133
Query: 131 KSSIDLQQDHVI-AALLDMNAKCGNMDRALKLFKEMPKRDLVSYCSMIQGLSIHGCGEDA 189
K L D V+ ++L+ M AKC + A+KLF EMP +D+ + ++I G E+A
Sbjct: 134 KEG--LMVDIVVGSSLVGMYAKCNEFECAVKLFDEMPDKDVACWNTVISCYYQSGKFEEA 191
Query: 190 VRLFNSMLMEGLVPDEVAFTIILTACSHSGLVDEGWNYFQSMKQKYGISPSPDHFACMVD 249
+R F M G PD V T +++C+ +D G + + G A +VD
Sbjct: 192 LRYFGMMRRFGFEPDSVTITTAISSCARLLDLDRGREIHKELVNS-GFRMDSFVSAALVD 250
Query: 250 LLSRSGHLGDAYELMKSMHEPHAGAWGALLGACKLHGDSDLGEIVANQLFE 300
+ + G L A E+ + M AW +++ GD I QLF+
Sbjct: 251 MYGKCGQLEMAIEVFEQMPNKTVVAWNSMINGYGFKGDG----ISCIQLFK 297
>Medtr1g014340.2 | PPR containing plant-like protein | HC |
chr1:3000992-3003085 | 20130731
Length = 697
Score = 240 bits (612), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 133/385 (34%), Positives = 210/385 (54%), Gaps = 42/385 (10%)
Query: 1 MPQRNVASWNAMLCGFVKDGDLSSARGVFDAMPEKNVVSF-------------------- 40
MP + V +WN+M+ G+ GD S +F M + V
Sbjct: 268 MPNKTVVAWNSMINGYGFKGDGISCIQLFKRMYSEGVKPTLTTLTSTLMACSQSAQLLEG 327
Query: 41 -------------------TTMIDGYAKAGDMAAARFLFEQATEKDVVAWSALISGYVQN 81
++++D Y K G + +A +F+ + V+W+ +ISGYV
Sbjct: 328 KFVHGYIIRNRIQPDIFLNSSLMDLYFKCGKVESAETIFKLMPKTTTVSWNVMISGYVTE 387
Query: 82 GQPNQALKVFLEMESKNVKPDEFILVSLMSATSQLGHLELAQWVDSYVSKSSIDLQQDHV 141
G+ AL++F EM V+PD S+++A SQL LE + + + + + ++ + V
Sbjct: 388 GKLFDALRLFGEMSKSFVEPDAITFTSVLAACSQLAALEKGREIHNLIVERNLG-NNEVV 446
Query: 142 IAALLDMNAKCGNMDRALKLFKEMPKRDLVSYCSMIQGLSIHGCGEDAVRLFNSMLMEGL 201
+ ALLDM AKCG ++ A +FK +P+RDLVS+ SMI HG +A+ LF ML +
Sbjct: 447 MGALLDMYAKCGAVEEAFGVFKCLPERDLVSWTSMITAYGSHGRVYEALELFAEMLQSNV 506
Query: 202 VPDEVAFTIILTACSHSGLVDEGWNYFQSMKQKYGISPSPDHFACMVDLLSRSGHLGDAY 261
PD V F IL+ACSH+GLVD+G +F M YGI P +H++C++ LL R+G L +AY
Sbjct: 507 KPDRVTFLAILSACSHAGLVDDGLYHFNQMINVYGIIPRIEHYSCLITLLGRAGRLHEAY 566
Query: 262 ELMKSMHE--PHAGAWGALLGACKLHGDSDLGEIVANQLFELEPQNAANYILLSNIYAAA 319
E+++S E L AC+LH + DLG +A L + +P +++ YI+LSN+YA+
Sbjct: 567 EILQSNPEISDDFQLLSTLFSACRLHKNLDLGVEIAENLIDKDPDDSSTYIILSNMYASF 626
Query: 320 ERWIDVSLVRSRMRERSVQKIPGCS 344
+W +V +VRS+M++ ++K PGCS
Sbjct: 627 GKWDEVRMVRSKMKDLGLKKNPGCS 651
Score = 112 bits (280), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 69/244 (28%), Positives = 125/244 (51%), Gaps = 2/244 (0%)
Query: 36 NVVSFTTMIDGYAKAGDMAAARFLFEQATEKDVVAWSALISGYVQNGQPNQALKVFLEME 95
++V ++++ YAK + A LF++ +KDV W+ +IS Y Q+G+ +AL+ F M
Sbjct: 140 DIVVGSSLVGMYAKCNEFECAVKLFDEMPDKDVACWNTVISCYYQSGKFEEALRYFGMMR 199
Query: 96 SKNVKPDEFILVSLMSATSQLGHLELAQWVDSYVSKSSIDLQQDHVIAALLDMNAKCGNM 155
+PD + + +S+ ++L L+ + + + S + V AAL+DM KCG +
Sbjct: 200 RFGFEPDSVTITTAISSCARLLDLDRGREIHKELVNSGFRMDS-FVSAALVDMYGKCGQL 258
Query: 156 DRALKLFKEMPKRDLVSYCSMIQGLSIHGCGEDAVRLFNSMLMEGLVPDEVAFTIILTAC 215
+ A+++F++MP + +V++ SMI G G G ++LF M EG+ P T L AC
Sbjct: 259 EMAIEVFEQMPNKTVVAWNSMINGYGFKGDGISCIQLFKRMYSEGVKPTLTTLTSTLMAC 318
Query: 216 SHSGLVDEGWNYFQSMKQKYGISPSPDHFACMVDLLSRSGHLGDAYELMKSMHEPHAGAW 275
S S + EG + + I P + ++DL + G + A + K M + +W
Sbjct: 319 SQSAQLLEG-KFVHGYIIRNRIQPDIFLNSSLMDLYFKCGKVESAETIFKLMPKTTTVSW 377
Query: 276 GALL 279
++
Sbjct: 378 NVMI 381
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 65/231 (28%), Positives = 110/231 (47%), Gaps = 9/231 (3%)
Query: 72 SALISGYVQNGQPNQALKVFLE-MESKNVKPDEFILVSLMSATSQLGHLELAQWVDSYVS 130
+ L++GY +N ++AL +F + M +KPD + S++ A L + L Q + + +
Sbjct: 74 NGLMAGYTRNCMYDEALGLFDKLMCYPCLKPDSYTYPSVLKACGGLRRVVLGQMIHTCLV 133
Query: 131 KSSIDLQQDHVI-AALLDMNAKCGNMDRALKLFKEMPKRDLVSYCSMIQGLSIHGCGEDA 189
K L D V+ ++L+ M AKC + A+KLF EMP +D+ + ++I G E+A
Sbjct: 134 KEG--LMVDIVVGSSLVGMYAKCNEFECAVKLFDEMPDKDVACWNTVISCYYQSGKFEEA 191
Query: 190 VRLFNSMLMEGLVPDEVAFTIILTACSHSGLVDEGWNYFQSMKQKYGISPSPDHFACMVD 249
+R F M G PD V T +++C+ +D G + + G A +VD
Sbjct: 192 LRYFGMMRRFGFEPDSVTITTAISSCARLLDLDRGREIHKELVNS-GFRMDSFVSAALVD 250
Query: 250 LLSRSGHLGDAYELMKSMHEPHAGAWGALLGACKLHGDSDLGEIVANQLFE 300
+ + G L A E+ + M AW +++ GD I QLF+
Sbjct: 251 MYGKCGQLEMAIEVFEQMPNKTVVAWNSMINGYGFKGDG----ISCIQLFK 297
>Medtr1g040565.1 | pentatricopeptide (PPR) repeat protein | HC |
chr1:15020896-15019352 | 20130731
Length = 514
Score = 239 bits (611), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 122/315 (38%), Positives = 184/315 (58%), Gaps = 6/315 (1%)
Query: 36 NVVSFTTMIDGYAKAGDMAAARFLFEQ--ATEKDVVAWSALISGYVQNGQPNQALKVFLE 93
++ +ID YAK + AR +F++ ++DVV W+ +I GY Q G N AL++F E
Sbjct: 127 DLAGINALIDMYAKCKSLEVARAMFDEICPKDRDVVTWTVMIGGYAQYGDANHALQLFSE 186
Query: 94 MESKN--VKPDEFILVSLMSATSQLGHLELAQWVDSYV-SKSSIDLQQDHVIAALLDMNA 150
M + + P++F + ++ A ++L L + + +YV +S ID V L+DM +
Sbjct: 187 MFKFDNCIVPNDFTISCVLMACARLAALRFGKQIHAYVLRRSRIDSDVLFVANCLIDMYS 246
Query: 151 KCGNMDRALKLFKEMPKRDLVSYCSMIQGLSIHGCGEDAVRLFNSMLMEGLVPDEVAFTI 210
K G++D A +F M KR+ +S+ S++ G +HGC EDA R+F+ M E LV D + F +
Sbjct: 247 KSGDVDTAQVVFDSMSKRNAISWTSLLTGYGMHGCSEDAFRVFDEMRKEALVLDGITFLV 306
Query: 211 ILTACSHSGLVDEGWNYFQSMKQKYGISPSPDHFACMVDLLSRSGHLGDAYELMKSMH-E 269
+L ACSHSG+VD G + F M + + + P +H+ACM DL R+G L +A L+ M E
Sbjct: 307 VLYACSHSGMVDRGIDLFYRMSKDFVVDPGVEHYACMADLFGRAGRLCEATRLINDMSME 366
Query: 270 PHAGAWGALLGACKLHGDSDLGEIVANQLFELEPQNAANYILLSNIYAAAERWIDVSLVR 329
P W ALL AC+ H + +L E A +L EL+ N Y LLSNIYA A RW DV+ +R
Sbjct: 367 PTPVVWIALLSACRTHSNVELAEFAAKKLLELKADNDGTYTLLSNIYANARRWKDVARIR 426
Query: 330 SRMRERSVQKIPGCS 344
M+ ++K PG S
Sbjct: 427 YLMKRTGIKKRPGWS 441
Score = 122 bits (307), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 87/283 (30%), Positives = 150/283 (53%), Gaps = 15/283 (5%)
Query: 22 LSSARGVFDAMPEKNVVSFTTMIDGYAKAGDMAAARFLF----EQATEKDVVAWSALISG 77
+ A V++ M K+VV++ M+ GY++ G A LF E+ E DVV WS++ISG
Sbjct: 1 MEDASKVYERMRFKDVVTWNAMVTGYSQNGRFEDALSLFGKMREERIELDVVTWSSVISG 60
Query: 78 YVQNGQPNQALKVFLEMESKNVKPDEFILVSLMSATSQLGHL----ELAQWVDSYVSKSS 133
Y Q G +A+ VF +M + +P+ L+SL+S + +G L E + ++ K
Sbjct: 61 YAQRGFGCEAMDVFRQMCGCSCRPNVVTLMSLLSGCASVGALLHGKETHCYSIKFILKGE 120
Query: 134 IDLQQDHV--IAALLDMNAKCGNMDRALKLFKEM-PK-RDLVSYCSMIQGLSIHGCGEDA 189
+ D + I AL+DM AKC +++ A +F E+ PK RD+V++ MI G + +G A
Sbjct: 121 HNDDNDDLAGINALIDMYAKCKSLEVARAMFDEICPKDRDVVTWTVMIGGYAQYGDANHA 180
Query: 190 VRLFNSMLM--EGLVPDEVAFTIILTACSHSGLVDEGWNYFQSMKQKYGISPSPDHFA-C 246
++LF+ M +VP++ + +L AC+ + G + ++ I A C
Sbjct: 181 LQLFSEMFKFDNCIVPNDFTISCVLMACARLAALRFGKQIHAYVLRRSRIDSDVLFVANC 240
Query: 247 MVDLLSRSGHLGDAYELMKSMHEPHAGAWGALLGACKLHGDSD 289
++D+ S+SG + A + SM + +A +W +LL +HG S+
Sbjct: 241 LIDMYSKSGDVDTAQVVFDSMSKRNAISWTSLLTGYGMHGCSE 283
>Medtr7g076350.1 | pentatricopeptide (PPR) repeat protein | HC |
chr7:28741911-28744729 | 20130731
Length = 786
Score = 239 bits (611), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 127/349 (36%), Positives = 208/349 (59%), Gaps = 10/349 (2%)
Query: 5 NVASWNAMLCGFVKDGDLSSARGVFDAMPEKNVVSFTTMIDGYAKAGDMAAARFLF---- 60
N+ +A++ + K + AR VFD MP ++VVS+ ++ Y K + LF
Sbjct: 213 NLFVCSALVSLYAKCLSVREARMVFDLMPHRDVVSWNGVLTAYFKNKEYEKGFSLFLKMS 272
Query: 61 EQATEKDVVAWSALISGYVQNGQPNQALKVFLEMESKNVKPDEFILVSLMSATSQLGHLE 120
D W+A+I G ++NG+ +A+++F +M+ KP+E + S++ A S +L
Sbjct: 273 RDGVRADEATWNAVIGGCMENGRSEEAVEMFRKMQKMGFKPNEITISSILPACSFSENLR 332
Query: 121 LAQWVDSYVSK--SSIDLQQDHVIAALLDMNAKCGNMDRALKLFKEMPKRDLVSYCSMIQ 178
+ + + YV + DL ALL M AKCG+++ + +F M ++D+V++ +MI
Sbjct: 333 MGKEIHCYVFRHWKVGDLTS---TTALLYMYAKCGDLNLSRNVFDMMRRKDVVAWNTMII 389
Query: 179 GLSIHGCGEDAVRLFNSMLMEGLVPDEVAFTIILTACSHSGLVDEGWNYFQSMKQKYGIS 238
++HG G++A+ LF+ ML+ + P+ V FT +L+ CSHS LV+EG F SM + + +
Sbjct: 390 ANAMHGNGKEALFLFDKMLLSRVQPNSVTFTGVLSGCSHSRLVEEGVQIFNSMGRDHLVE 449
Query: 239 PSPDHFACMVDLLSRSGHLGDAYELMKSM-HEPHAGAWGALLGACKLHGDSDLGEIVANQ 297
P +H++C+VD+ SR+G L +AY+ ++ M EP A AWGALL AC+++ + +L +I A +
Sbjct: 450 PDANHYSCVVDIYSRAGRLNEAYKFIQGMPMEPTASAWGALLAACRVYKNVELAKISAKK 509
Query: 298 LFELEPQNAANYILLSNIYAAAERWIDVSLVRSRMRERSVQKIPGCSKL 346
LFE+EP N NY+ L NI A+ W + S VR M+ER + K PGCS L
Sbjct: 510 LFEIEPNNPGNYVSLFNILVTAKMWSEASQVRILMKERGITKTPGCSWL 558
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 57/198 (28%), Positives = 101/198 (51%), Gaps = 2/198 (1%)
Query: 43 MIDGYAKAGDMAAARFLFEQATEKDVVAWSALISGYVQNGQPNQALKVFLEMESKNVKPD 102
+I Y K + AR +F+ +DVV+W++L S YV+ G P + + VF EM VKP+
Sbjct: 119 LIHAYGKCKCVEGARRVFDDLVVRDVVSWTSLSSCYVKCGFPRKGMDVFREMGWSGVKPN 178
Query: 103 EFILVSLMSATSQLGHLELAQWVDSYVSKSSIDLQQDHVIAALLDMNAKCGNMDRALKLF 162
+ S++ A ++L L+ + + + + + + V +AL+ + AKC ++ A +F
Sbjct: 179 PMTVSSILPACAELKDLKSGKEIHGFAVRHGMVVNL-FVCSALVSLYAKCLSVREARMVF 237
Query: 163 KEMPKRDLVSYCSMIQGLSIHGCGEDAVRLFNSMLMEGLVPDEVAFTIILTACSHSGLVD 222
MP RD+VS+ ++ + E LF M +G+ DE + ++ C +G +
Sbjct: 238 DLMPHRDVVSWNGVLTAYFKNKEYEKGFSLFLKMSRDGVRADEATWNAVIGGCMENGRSE 297
Query: 223 EGWNYFQSMKQKYGISPS 240
E F+ M QK G P+
Sbjct: 298 EAVEMFRKM-QKMGFKPN 314
Score = 65.1 bits (157), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 42/166 (25%), Positives = 79/166 (47%), Gaps = 1/166 (0%)
Query: 51 GDMAAARFLFEQATEKDVVAWSALISGYVQNGQPNQALKVFLEMESKNVKPDEFILVSLM 110
GD AR LF+ + D S LIS +G N+A+K++ ++ + +KPD + ++
Sbjct: 26 GDFNRARQLFDNIPQPDPTTCSTLISALTTHGLSNEAIKIYSSLQERGIKPDMPVFLAAA 85
Query: 111 SATSQLGHLELAQWVDSYVSKSSIDLQQDHVIAALLDMNAKCGNMDRALKLFKEMPKRDL 170
A + G + V ++ + + V AL+ KC ++ A ++F ++ RD+
Sbjct: 86 KACAVSGDALRVKEVHDDATRCGV-MSDVFVGNALIHAYGKCKCVEGARRVFDDLVVRDV 144
Query: 171 VSYCSMIQGLSIHGCGEDAVRLFNSMLMEGLVPDEVAFTIILTACS 216
VS+ S+ G + +F M G+ P+ + + IL AC+
Sbjct: 145 VSWTSLSSCYVKCGFPRKGMDVFREMGWSGVKPNPMTVSSILPACA 190
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 23/80 (28%), Positives = 44/80 (55%)
Query: 140 HVIAALLDMNAKCGNMDRALKLFKEMPKRDLVSYCSMIQGLSIHGCGEDAVRLFNSMLME 199
H+ L+ + G+ +RA +LF +P+ D + ++I L+ HG +A+++++S+
Sbjct: 13 HLGLRLIRVALNVGDFNRARQLFDNIPQPDPTTCSTLISALTTHGLSNEAIKIYSSLQER 72
Query: 200 GLVPDEVAFTIILTACSHSG 219
G+ PD F AC+ SG
Sbjct: 73 GIKPDMPVFLAAAKACAVSG 92
>Medtr1g040585.1 | pentatricopeptide (PPR) repeat protein | HC |
chr1:15028593-15026470 | 20130731
Length = 571
Score = 239 bits (611), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 122/315 (38%), Positives = 184/315 (58%), Gaps = 6/315 (1%)
Query: 36 NVVSFTTMIDGYAKAGDMAAARFLFEQ--ATEKDVVAWSALISGYVQNGQPNQALKVFLE 93
++ +ID YAK + AR +F++ ++DVV W+ +I GY Q G N AL++F E
Sbjct: 184 DLAGINALIDMYAKCKSLEVARAMFDEICPKDRDVVTWTVMIGGYAQYGDANHALQLFSE 243
Query: 94 MESKN--VKPDEFILVSLMSATSQLGHLELAQWVDSYV-SKSSIDLQQDHVIAALLDMNA 150
M + + P++F + ++ A ++L L + + +YV +S ID V L+DM +
Sbjct: 244 MFKFDNCIVPNDFTISCVLMACARLAALRFGKQIHAYVLRRSRIDSDVLFVANCLIDMYS 303
Query: 151 KCGNMDRALKLFKEMPKRDLVSYCSMIQGLSIHGCGEDAVRLFNSMLMEGLVPDEVAFTI 210
K G++D A +F M KR+ +S+ S++ G +HGC EDA R+F+ M E LV D + F +
Sbjct: 304 KSGDVDTAQVVFDSMSKRNAISWTSLLTGYGMHGCSEDAFRVFDEMRKEALVLDGITFLV 363
Query: 211 ILTACSHSGLVDEGWNYFQSMKQKYGISPSPDHFACMVDLLSRSGHLGDAYELMKSMH-E 269
+L ACSHSG+VD G + F M + + + P +H+ACM DL R+G L +A L+ M E
Sbjct: 364 VLYACSHSGMVDRGIDLFYRMSKDFVVDPGVEHYACMADLFGRAGRLCEATRLINDMSME 423
Query: 270 PHAGAWGALLGACKLHGDSDLGEIVANQLFELEPQNAANYILLSNIYAAAERWIDVSLVR 329
P W ALL AC+ H + +L E A +L EL+ N Y LLSNIYA A RW DV+ +R
Sbjct: 424 PTPVVWIALLSACRTHSNVELAEFAAKKLLELKADNDGTYTLLSNIYANARRWKDVARIR 483
Query: 330 SRMRERSVQKIPGCS 344
M+ ++K PG S
Sbjct: 484 YLMKRTGIKKRPGWS 498
Score = 128 bits (321), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 92/304 (30%), Positives = 159/304 (52%), Gaps = 15/304 (4%)
Query: 1 MPQRNVASWNAMLCGFVKDGDLSSARGVFDAMPEKNVVSFTTMIDGYAKAGDMAAARFLF 60
+P NA++ + K G + A V++ M K+VV++ M+ GY++ G A LF
Sbjct: 37 LPVSGFFVGNALVDMYAKCGKMEDASKVYERMRFKDVVTWNAMVTGYSQNGRFEDALSLF 96
Query: 61 ----EQATEKDVVAWSALISGYVQNGQPNQALKVFLEMESKNVKPDEFILVSLMSATSQL 116
E+ E DVV WS++ISGY Q G +A+ VF +M + +P+ L+SL+S + +
Sbjct: 97 GKMREERIELDVVTWSSVISGYAQRGFGCEAMDVFRQMCGCSCRPNVVTLMSLLSGCASV 156
Query: 117 GHL----ELAQWVDSYVSKSSIDLQQDHV--IAALLDMNAKCGNMDRALKLFKEM-PK-R 168
G L E + ++ K + D + I AL+DM AKC +++ A +F E+ PK R
Sbjct: 157 GALLHGKETHCYSIKFILKGEHNDDNDDLAGINALIDMYAKCKSLEVARAMFDEICPKDR 216
Query: 169 DLVSYCSMIQGLSIHGCGEDAVRLFNSMLM--EGLVPDEVAFTIILTACSHSGLVDEGWN 226
D+V++ MI G + +G A++LF+ M +VP++ + +L AC+ + G
Sbjct: 217 DVVTWTVMIGGYAQYGDANHALQLFSEMFKFDNCIVPNDFTISCVLMACARLAALRFGKQ 276
Query: 227 YFQSMKQKYGISPSPDHFA-CMVDLLSRSGHLGDAYELMKSMHEPHAGAWGALLGACKLH 285
+ ++ I A C++D+ S+SG + A + SM + +A +W +LL +H
Sbjct: 277 IHAYVLRRSRIDSDVLFVANCLIDMYSKSGDVDTAQVVFDSMSKRNAISWTSLLTGYGMH 336
Query: 286 GDSD 289
G S+
Sbjct: 337 GCSE 340
>Medtr4g088840.1 | pentatricopeptide (PPR) repeat protein | HC |
chr4:35446469-35444694 | 20130731
Length = 591
Score = 239 bits (609), Expect = 4e-63, Method: Compositional matrix adjust.
Identities = 124/307 (40%), Positives = 191/307 (62%), Gaps = 12/307 (3%)
Query: 47 YAKAGDMAAARFLFEQATEKDVVAWSALISGYVQNGQPNQALKVFLEMESKNVKPDEFIL 106
YAK+ + AR +F++ ++ VVAW+ +ISGY NG N+A+ +F +M V PD
Sbjct: 161 YAKSSALCVARKVFDKMPQRSVVAWNTMISGYEHNGLANEAMTLFRKMNEMGVCPDSATF 220
Query: 107 VSLMSATSQLGHLELAQWVDSYVSKSSIDLQQDHVI--AALLDMNAKCGNMDRALKLFKE 164
VS+ SA SQ+G LEL WV + + I + VI +L++M ++CG++ RA +F
Sbjct: 221 VSVSSACSQIGSLELGCWVYDSIVSNGIRVN---VILGTSLINMFSRCGDVRRARAVFDS 277
Query: 165 MPKRDLVSYCSMIQGLSIHGCGEDAVRLFNSMLME-GLVPDEVAFTIILTACSHSGLVDE 223
+ + +++++ +MI G +HG G +A+ LF M E GLVP+ V F +L+AC+H+GL+ E
Sbjct: 278 ISEGNVIAWTAMISGYGMHGYGVEAMELFYEMKKERGLVPNTVTFVAVLSACAHAGLIHE 337
Query: 224 GWNYFQSMKQKYGISPSPDHFACMVDLLSRSGHLGDAYELMKSM----HEPHAGAWGALL 279
G F SM+++YG+ P +H CMVD+L ++G L +AY+ +K + H P W A+L
Sbjct: 338 GRQVFASMREEYGLVPGLEHHVCMVDMLGKAGLLTEAYQFIKELCPVEHVP--AVWTAML 395
Query: 280 GACKLHGDSDLGEIVANQLFELEPQNAANYILLSNIYAAAERWIDVSLVRSRMRERSVQK 339
GACK+H + DLG A L LEP+N +NY+LLSN+YA A R V VR+ M +R ++K
Sbjct: 396 GACKMHKNYDLGVEAAQHLISLEPENPSNYVLLSNMYALAGRMDRVESVRNVMIQRGIKK 455
Query: 340 IPGCSKL 346
G S +
Sbjct: 456 QAGYSSI 462
Score = 95.9 bits (237), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 66/237 (27%), Positives = 113/237 (47%), Gaps = 2/237 (0%)
Query: 50 AGDMAAARFLFEQATEKDVVAWSALISGYVQNGQPNQALKVFLEMESKNVKPDEFILVSL 109
AG +A R LF T+ D +++LI Q+G + + M S KP + S+
Sbjct: 63 AGSIAYTRRLFLSVTDPDSFLFNSLIKASSQHGFSLDTIFFYRRMLSSPHKPSSYTFTSV 122
Query: 110 MSATSQLGHLELAQWVDSYVSKSSIDLQQDHVIAALLDMNAKCGNMDRALKLFKEMPKRD 169
A + L L++ + S+V S V AA++ AK + A K+F +MP+R
Sbjct: 123 FKACAHLSALKIGTILHSHVFVSGFG-SNSFVQAAIVAFYAKSSALCVARKVFDKMPQRS 181
Query: 170 LVSYCSMIQGLSIHGCGEDAVRLFNSMLMEGLVPDEVAFTIILTACSHSGLVDEGWNYFQ 229
+V++ +MI G +G +A+ LF M G+ PD F + +ACS G ++ G +
Sbjct: 182 VVAWNTMISGYEHNGLANEAMTLFRKMNEMGVCPDSATFVSVSSACSQIGSLELGCWVYD 241
Query: 230 SMKQKYGISPSPDHFACMVDLLSRSGHLGDAYELMKSMHEPHAGAWGALLGACKLHG 286
S+ GI + ++++ SR G + A + S+ E + AW A++ +HG
Sbjct: 242 SIVSN-GIRVNVILGTSLINMFSRCGDVRRARAVFDSISEGNVIAWTAMISGYGMHG 297
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 52/207 (25%), Positives = 99/207 (47%), Gaps = 44/207 (21%)
Query: 1 MPQRNVASWNAMLCGFVKDGDLSSARGVFDAMPEK------------------------- 35
MPQR+V +WN M+ G+ +G + A +F M E
Sbjct: 177 MPQRSVVAWNTMISGYEHNGLANEAMTLFRKMNEMGVCPDSATFVSVSSACSQIGSLELG 236
Query: 36 --------------NVVSFTTMIDGYAKAGDMAAARFLFEQATEKDVVAWSALISGYVQN 81
NV+ T++I+ +++ GD+ AR +F+ +E +V+AW+A+ISGY +
Sbjct: 237 CWVYDSIVSNGIRVNVILGTSLINMFSRCGDVRRARAVFDSISEGNVIAWTAMISGYGMH 296
Query: 82 GQPNQALKVFLEMES-KNVKPDEFILVSLMSATSQLGHLELAQWVDSYVSKSS--IDLQQ 138
G +A+++F EM+ + + P+ V+++SA + G + + V + + + + +
Sbjct: 297 GYGVEAMELFYEMKKERGLVPNTVTFVAVLSACAHAGLIHEGRQVFASMREEYGLVPGLE 356
Query: 139 DHVIAALLDMNAKCGNMDRALKLFKEM 165
HV ++DM K G + A + KE+
Sbjct: 357 HHV--CMVDMLGKAGLLTEAYQFIKEL 381
>Medtr5g006570.1 | pentatricopeptide (PPR) repeat protein | HC |
chr5:988953-991582 | 20130731
Length = 838
Score = 238 bits (608), Expect = 5e-63, Method: Compositional matrix adjust.
Identities = 119/338 (35%), Positives = 209/338 (61%), Gaps = 2/338 (0%)
Query: 10 NAMLCGFVKDGDLSSARGVFDAMPEKNVVSFTTMIDGYAKAGDMAAARFLFEQATEKDVV 69
NA++ ++K G +A VFD+M K VV++ ++I G + G++ A +F + E ++V
Sbjct: 373 NAIIDMYMKCGKREAACKVFDSMSNKTVVTWNSLIAGLVRDGELELALRIFGEMPESNLV 432
Query: 70 AWSALISGYVQNGQPNQALKVFLEMESKNVKPDEFILVSLMSATSQLGHLELAQWVDSYV 129
+W+ +I VQ +A+ + EM+++ +K D +V + SA LG L+LA+W+ +Y+
Sbjct: 433 SWNTMIGAMVQASMFEEAIDLLREMQNQGIKGDRVTMVGIASACGYLGALDLAKWIYTYI 492
Query: 130 SKSSIDLQQDHVIAALLDMNAKCGNMDRALKLFKEMPKRDLVSYCSMIQGLSIHGCGEDA 189
K+ I + + AL+DM ++CG+ A+++F+ M KRD+ ++ + I+ ++ G + A
Sbjct: 493 EKNDIHIDM-QLGTALVDMFSRCGDPLNAMRVFENMEKRDVSAWTAAIRVKAVEGNAKGA 551
Query: 190 VRLFNSMLMEGLVPDEVAFTIILTACSHSGLVDEGWNYFQSMKQKYGISPSPDHFACMVD 249
+ LF+ ML + + D+ F +LTA SH G VD+G F +M++ +G+SP H+ CMVD
Sbjct: 552 IELFDEMLKQDVKADDFVFVALLTAFSHGGYVDQGRQLFWAMEKIHGVSPQIVHYGCMVD 611
Query: 250 LLSRSGHLGDAYELMKSMH-EPHAGAWGALLGACKLHGDSDLGEIVANQLFELEPQNAAN 308
LL R+G L +A++LMKSM +P+ WG+ L AC+ H + + ++ +L P+
Sbjct: 612 LLGRAGLLEEAFDLMKSMPIKPNDVIWGSFLAACRKHKNVEFANYADEKITQLAPEKVGI 671
Query: 309 YILLSNIYAAAERWIDVSLVRSRMRERSVQKIPGCSKL 346
++LLSNIYA+A +W DV+ VR +M+E+ QK+ G S +
Sbjct: 672 HVLLSNIYASAGKWNDVARVRLQMKEKGFQKVAGSSSI 709
Score = 118 bits (296), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 87/317 (27%), Positives = 153/317 (48%), Gaps = 42/317 (13%)
Query: 11 AMLCGF---VKDGDLSSARGVFDAMPEKNVVSFT----TMIDGYAKAGDMAAARFLFEQA 63
M+C K DL + V + M E V S T ++D Y K GDM A R +F++
Sbjct: 235 TMVCAISACAKLKDLELGKKVCNLMTELGVKSNTLVVNALLDMYMKCGDMYAVREIFDEF 294
Query: 64 TEKDVVAWSALISGYVQNGQPNQALKVFLEMESKNVKPDEFILVSLMSATSQLGHLELAQ 123
++K++V ++ ++S YVQ+G + L V EM K +PD+ ++S ++A +QLG L + +
Sbjct: 295 SDKNLVMYNTIMSNYVQHGLAGEVLVVLDEMLQKGQRPDKVTMLSTIAACAQLGDLSVGK 354
Query: 124 WVDSYVSKSSIDLQQDHVIAALLDMNAKCGN----------------------------- 154
+YV ++ ++ + D++ A++DM KCG
Sbjct: 355 SSHAYVFRNGLE-RLDNISNAIIDMYMKCGKREAACKVFDSMSNKTVVTWNSLIAGLVRD 413
Query: 155 --MDRALKLFKEMPKRDLVSYCSMIQGLSIHGCGEDAVRLFNSMLMEGLVPDEVAFTIIL 212
++ AL++F EMP+ +LVS+ +MI + E+A+ L M +G+ D V I
Sbjct: 414 GELELALRIFGEMPESNLVSWNTMIGAMVQASMFEEAIDLLREMQNQGIKGDRVTMVGIA 473
Query: 213 TACSHSGLVD-EGWNYFQSMKQKYGISPSPDHFACMVDLLSRSGHLGDAYELMKSMHEPH 271
+AC + G +D W Y + +K I +VD+ SR G +A + ++M +
Sbjct: 474 SACGYLGALDLAKWIY--TYIEKNDIHIDMQLGTALVDMFSRCGDPLNAMRVFENMEKRD 531
Query: 272 AGAWGALLGACKLHGDS 288
AW A + + G++
Sbjct: 532 VSAWTAAIRVKAVEGNA 548
Score = 103 bits (256), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 66/257 (25%), Positives = 128/257 (49%), Gaps = 2/257 (0%)
Query: 35 KNVVSFTTMIDGYAKAGDMAAARFLFEQATEKDVVAWSALISGYVQNGQPNQALKVFLEM 94
K++ ++I YA G + R +F++ E++VV+W++LI+GY +A+ +F EM
Sbjct: 165 KDLFVANSLIHFYAACGKVDLGRKVFDEMLERNVVSWTSLINGYSVVNMAKEAVCLFFEM 224
Query: 95 ESKNVKPDEFILVSLMSATSQLGHLELAQWVDSYVSKSSIDLQQDHVIAALLDMNAKCGN 154
V+P+ +V +SA ++L LEL + V + +++ + V+ ALLDM KCG+
Sbjct: 225 VEVGVEPNPVTMVCAISACAKLKDLELGKKVCNLMTELGVK-SNTLVVNALLDMYMKCGD 283
Query: 155 MDRALKLFKEMPKRDLVSYCSMIQGLSIHGCGEDAVRLFNSMLMEGLVPDEVAFTIILTA 214
M ++F E ++LV Y +++ HG + + + + ML +G PD+V + A
Sbjct: 284 MYAVREIFDEFSDKNLVMYNTIMSNYVQHGLAGEVLVVLDEMLQKGQRPDKVTMLSTIAA 343
Query: 215 CSHSGLVDEGWNYFQSMKQKYGISPSPDHFACMVDLLSRSGHLGDAYELMKSMHEPHAGA 274
C+ G + G + + + G+ + ++D+ + G A ++ SM
Sbjct: 344 CAQLGDLSVGKSS-HAYVFRNGLERLDNISNAIIDMYMKCGKREAACKVFDSMSNKTVVT 402
Query: 275 WGALLGACKLHGDSDLG 291
W +L+ G+ +L
Sbjct: 403 WNSLIAGLVRDGELELA 419
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 54/206 (26%), Positives = 94/206 (45%), Gaps = 41/206 (19%)
Query: 1 MPQRNVASWNAMLCGFVK-------------------DGD------LSSARGVFDAMP-- 33
MP+ N+ SWN M+ V+ GD ++SA G A+
Sbjct: 426 MPESNLVSWNTMIGAMVQASMFEEAIDLLREMQNQGIKGDRVTMVGIASACGYLGALDLA 485
Query: 34 -------EKNVVSF-----TTMIDGYAKAGDMAAARFLFEQATEKDVVAWSALISGYVQN 81
EKN + T ++D +++ GD A +FE ++DV AW+A I
Sbjct: 486 KWIYTYIEKNDIHIDMQLGTALVDMFSRCGDPLNAMRVFENMEKRDVSAWTAAIRVKAVE 545
Query: 82 GQPNQALKVFLEMESKNVKPDEFILVSLMSATSQLGHLELAQWVDSYVSK-SSIDLQQDH 140
G A+++F EM ++VK D+F+ V+L++A S G+++ + + + K + Q H
Sbjct: 546 GNAKGAIELFDEMLKQDVKADDFVFVALLTAFSHGGYVDQGRQLFWAMEKIHGVSPQIVH 605
Query: 141 VIAALLDMNAKCGNMDRALKLFKEMP 166
++D+ + G ++ A L K MP
Sbjct: 606 Y-GCMVDLLGRAGLLEEAFDLMKSMP 630
>Medtr2g016780.1 | editing factor, putative | HC |
chr2:5197710-5195940 | 20130731
Length = 551
Score = 238 bits (607), Expect = 6e-63, Method: Compositional matrix adjust.
Identities = 129/355 (36%), Positives = 203/355 (57%), Gaps = 10/355 (2%)
Query: 1 MPQRNVASWNAMLCGFVKDGDLSSARGVFDAMP----EKNVVSFTTMIDGYAKAGDMAAA 56
M +R+VASW +M+CGF G + A +F+ M E N ++ +I YA+ GD A
Sbjct: 177 MSERDVASWTSMICGFCNTGRIEEALVLFERMKMEGYEPNDFTWNAIIATYARLGDSKKA 236
Query: 57 RFLFEQATEK----DVVAWSALISGYVQNGQPNQALKVFLEMESKNVKPDEFILVSLMSA 112
E+ ++ DVVAW+ALISG+ QN Q + VF EM + P++ + +L+ A
Sbjct: 237 FGFMERMQKEGFIPDVVAWNALISGFAQNHQFRETFTVFREMLVSGICPNQVTIAALLPA 296
Query: 113 TSQLGHLELAQWVDSYVSKSSIDLQQDHVIAALLDMNAKCGNMDRALKLFKEMPKRDLVS 172
+G ++ + V ++ + D + +AL+DM +KCG++ A +F ++ +++ S
Sbjct: 297 CGSVGSVKWGREVHGFICRKGFD-ANVFIASALIDMYSKCGSLKDARNVFDKIQCKNVAS 355
Query: 173 YCSMIQGLSIHGCGEDAVRLFNSMLMEGLVPDEVAFTIILTACSHSGLVDEGWNYFQSMK 232
+ +MI G + A+ LF M EGL P+EV F IL+ACSHSG V++G F MK
Sbjct: 356 WNAMIDCFGKCGMVDSALELFTKMKEEGLQPNEVTFACILSACSHSGSVEKGLEIFTLMK 415
Query: 233 QKYGISPSPDHFACMVDLLSRSGHLGDAYELMKSMH-EPHAGAWGALLGACKLHGDSDLG 291
+ YG+ +H+AC+VDLL RSG + +AYE +K+M + GA L CK+HG DL
Sbjct: 416 ECYGVEICKEHYACIVDLLCRSGKIVEAYEFIKAMPIQVTESIAGAFLNGCKIHGRKDLA 475
Query: 292 EIVANQLFELEPQNAANYILLSNIYAAAERWIDVSLVRSRMRERSVQKIPGCSKL 346
+ +A ++ ++ + +++ LSNIYAA W + VR M+ER+V K PG S L
Sbjct: 476 KKMAEEIMRMQLNGSGSFVTLSNIYAAEGDWEEAGNVRKVMKERNVNKWPGSSWL 530
Score = 89.0 bits (219), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 69/265 (26%), Positives = 125/265 (47%), Gaps = 9/265 (3%)
Query: 36 NVVSFTTMIDG-YAKAGDMAAARFLFEQATEKDVVAWSALISGYVQNGQPNQALKVFLEM 94
N++S ++ + G Y+ D+ +A LF + +V A++ +I G V NG + AL F M
Sbjct: 48 NILSLSSKLVGMYSSCTDLKSATLLFHNIHKPNVFAFNWMILGMVYNGYFDNALFYFRLM 107
Query: 95 ESKNVKPDEFILVSLMSATSQLGHLELAQWVDSYVSKSSIDLQQDHVIA-ALLDMNAKCG 153
+ ++F ++ L ++ + V + + + L D +I L+DM KCG
Sbjct: 108 RDIGLIGNKFTFGIVIKTCVGLMDMKKGKQVHGMICE--MGLMNDVLIGNGLIDMYGKCG 165
Query: 154 NMDRALKLFKEMPKRDLVSYCSMIQGLSIHGCGEDAVRLFNSMLMEGLVPDEVAFTIILT 213
++D A ++F M +RD+ S+ SMI G G E+A+ LF M MEG P++ + I+
Sbjct: 166 SVDYACRVFDGMSERDVASWTSMICGFCNTGRIEEALVLFERMKMEGYEPNDFTWNAIIA 225
Query: 214 ACSHSGLVDEGWNYFQSMKQKYGISPSPDHFACMVDLLSRSGHLGDAYELMKSMHE---- 269
+ G + + + + M QK G P + ++ +++ + + + + M
Sbjct: 226 TYARLGDSKKAFGFMERM-QKEGFIPDVVAWNALISGFAQNHQFRETFTVFREMLVSGIC 284
Query: 270 PHAGAWGALLGACKLHGDSDLGEIV 294
P+ ALL AC G G V
Sbjct: 285 PNQVTIAALLPACGSVGSVKWGREV 309
>Medtr1g059280.2 | pentatricopeptide (PPR) repeat protein | HC |
chr1:21517672-21518970 | 20130731
Length = 432
Score = 238 bits (607), Expect = 6e-63, Method: Compositional matrix adjust.
Identities = 126/307 (41%), Positives = 190/307 (61%), Gaps = 12/307 (3%)
Query: 47 YAKAGDMAAARFLFEQATEKDVVAWSALISGYVQNGQPNQALKVFLEMESKNVKPDEFIL 106
YAK G + AR +FE E+DVV+ +A+ISGY Q G +AL++F ++ + +K +
Sbjct: 2 YAKDGKIHEARTVFECLPERDVVSCTAIISGYAQLGLDEEALELFRRLQGEGMKSNYVTY 61
Query: 107 VSLMSATSQLGHLELAQWVDSYVSKSSID----LQQDHVIAALLDMNAKCGNMDRALKLF 162
+++A S L L+L + V ++V +S I LQ +L+DM +KCGN+ + ++F
Sbjct: 62 TGVLTALSGLAALDLGKQVHNHVLRSEIPSFVVLQN-----SLIDMYSKCGNLTYSRRIF 116
Query: 163 KEMPKRDLVSYCSMIQGLSIHGCGEDAVRLFNSMLMEGLV-PDEVAFTIILTACSHSGLV 221
M +R ++S+ +M+ G S HG G + ++LF M E V PD V +L+ CSH GL
Sbjct: 117 DTMYERTVISWNAMLVGYSKHGEGREVLKLFTLMREETKVKPDSVTILAVLSGCSHGGLE 176
Query: 222 DEGWNYFQSMKQ-KYGISPSPDHFACMVDLLSRSGHLGDAYELMKSM-HEPHAGAWGALL 279
D+G N F M K + P +H+ C+VDLL RSG + +A+E +K M EP A WG+LL
Sbjct: 177 DKGLNIFNDMSSGKIEVEPKMEHYGCVVDLLGRSGRVEEAFEFIKKMPFEPTAAIWGSLL 236
Query: 280 GACKLHGDSDLGEIVANQLFELEPQNAANYILLSNIYAAAERWIDVSLVRSRMRERSVQK 339
GAC++H + D+GE QL E+EP NA NY++LSN+YA+A RW DVS +R M +++V K
Sbjct: 237 GACRVHSNVDIGEFAGQQLLEIEPGNAGNYVILSNLYASAGRWEDVSSLRDLMLKKTVTK 296
Query: 340 IPGCSKL 346
PG S +
Sbjct: 297 EPGRSSI 303
Score = 72.4 bits (176), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 44/172 (25%), Positives = 89/172 (51%), Gaps = 10/172 (5%)
Query: 3 QRNVASWNAMLCGFVKDGDLSSARGVFDAMPEKNVVSFT----TMIDGYAKAGDMAAARF 58
+ N ++ +L L + V + + + SF ++ID Y+K G++ +R
Sbjct: 55 KSNYVTYTGVLTALSGLAALDLGKQVHNHVLRSEIPSFVVLQNSLIDMYSKCGNLTYSRR 114
Query: 59 LFEQATEKDVVAWSALISGYVQNGQPNQALKVFLEM-ESKNVKPDEFILVSLMSATSQLG 117
+F+ E+ V++W+A++ GY ++G+ + LK+F M E VKPD +++++S S G
Sbjct: 115 IFDTMYERTVISWNAMLVGYSKHGEGREVLKLFTLMREETKVKPDSVTILAVLSGCSH-G 173
Query: 118 HLE---LAQWVDSYVSKSSIDLQQDHVIAALLDMNAKCGNMDRALKLFKEMP 166
LE L + D K ++ + +H ++D+ + G ++ A + K+MP
Sbjct: 174 GLEDKGLNIFNDMSSGKIEVEPKMEHY-GCVVDLLGRSGRVEEAFEFIKKMP 224
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 41/143 (28%), Positives = 72/143 (50%), Gaps = 7/143 (4%)
Query: 148 MNAKCGNMDRALKLFKEMPKRDLVSYCSMIQGLSIHGCGEDAVRLFNSMLMEGLVPDEVA 207
M AK G + A +F+ +P+RD+VS ++I G + G E+A+ LF + EG+ + V
Sbjct: 1 MYAKDGKIHEARTVFECLPERDVVSCTAIISGYAQLGLDEEALELFRRLQGEGMKSNYVT 60
Query: 208 FTIILTACSHSGLVDEGWNYFQSMKQKYGISPSPDHFA---CMVDLLSRSGHLGDAYELM 264
+T +LTA S +D G + + S P ++D+ S+ G+L + +
Sbjct: 61 YTGVLTALSGLAALDLGKQVHNHVLR----SEIPSFVVLQNSLIDMYSKCGNLTYSRRIF 116
Query: 265 KSMHEPHAGAWGALLGACKLHGD 287
+M+E +W A+L HG+
Sbjct: 117 DTMYERTVISWNAMLVGYSKHGE 139
>Medtr3g466010.1 | PPR containing plant-like protein | HC |
chr3:27120018-27122473 | 20130731
Length = 536
Score = 238 bits (607), Expect = 6e-63, Method: Compositional matrix adjust.
Identities = 128/345 (37%), Positives = 209/345 (60%), Gaps = 6/345 (1%)
Query: 5 NVASWNAMLCGFVKDGDLSS-ARGVFDAMPEK---NVVSFTTMIDGYAKAGDMAAARFLF 60
NV NA++ + + D+S A+ VF+ ++ +VV++ +M+ G + G++ A +F
Sbjct: 144 NVFVRNALIHFYFEGFDVSEYAKRVFEEEVDEVCSDVVTWNSMLAGLVRKGEVRDAEKMF 203
Query: 61 EQATEKDVVAWSALISGYVQNGQPNQALKVFLEMESKNVKPDEFILVSLMSATSQLGHLE 120
++ ++DVV+WS++I GYVQNG+ L+ F M K ++P+E ILV+++SA++QLG L
Sbjct: 204 DEMPKRDVVSWSSMIMGYVQNGKLEDGLECFRLMREKGIRPNESILVTMLSASAQLGLLG 263
Query: 121 LAQWVDSYVSKSSIDLQQDHVIAALLDMNAKCGNMDRALKLFKEMPKRDLVSYCSMIQGL 180
++V S + + + L+DM AKCG ++ + LF M +RD+ ++ MI GL
Sbjct: 264 WGRFVHSTIESLRFRISVA-IGTGLVDMYAKCGCIEESRDLFDGMMERDIWTWTVMICGL 322
Query: 181 SIHGCGEDAVRLFNSMLMEGLVPDEVAFTIILTACSHSGLVDEGWNYFQSMKQKYGISPS 240
+ H ++A+ LF + EG P V F +L ACS +GLV EG YF+ M YGISP
Sbjct: 323 ASHDRAKEALVLFREFIREGFRPVNVIFVGVLNACSRAGLVSEGRYYFKLMVDGYGISPE 382
Query: 241 PDHFACMVDLLSRSGHLGDAYELMKSMH-EPHAGAWGALLGACKLHGDSDLGEIVANQLF 299
+H+ CMVDL +R+G + +A L+++M EP W LL AC++HG ++GE + N+L
Sbjct: 383 MEHYGCMVDLFARAGLIDEAVRLIETMTVEPDPVMWATLLDACEIHGFVEMGEKIGNKLI 442
Query: 300 ELEPQNAANYILLSNIYAAAERWIDVSLVRSRMRERSVQKIPGCS 344
+++P + +Y+ L+ IYA + +W DV VR M ER K+ G S
Sbjct: 443 KMDPTHDGHYVQLAGIYAKSRKWDDVVRVRRLMVERVPIKVAGWS 487
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 59/242 (24%), Positives = 110/242 (45%), Gaps = 50/242 (20%)
Query: 1 MPQRNVASWNAMLCGFVKDGDLSSARGVFDAMPEKNV----------------------- 37
MP+R+V SW++M+ G+V++G L F M EK +
Sbjct: 206 MPKRDVVSWSSMIMGYVQNGKLEDGLECFRLMREKGIRPNESILVTMLSASAQLGLLGWG 265
Query: 38 ---------VSF-------TTMIDGYAKAGDMAAARFLFEQATEKDVVAWSALISGYVQN 81
+ F T ++D YAK G + +R LF+ E+D+ W+ +I G +
Sbjct: 266 RFVHSTIESLRFRISVAIGTGLVDMYAKCGCIEESRDLFDGMMERDIWTWTVMICGLASH 325
Query: 82 GQPNQALKVFLEMESKNVKPDEFILVSLMSATSQLGHLELAQW-----VDSYVSKSSIDL 136
+ +AL +F E + +P I V +++A S+ G + ++ VD Y I
Sbjct: 326 DRAKEALVLFREFIREGFRPVNVIFVGVLNACSRAGLVSEGRYYFKLMVDGY----GISP 381
Query: 137 QQDHVIAALLDMNAKCGNMDRALKLFKEMP-KRDLVSYCSMIQGLSIHGCGEDAVRLFNS 195
+ +H ++D+ A+ G +D A++L + M + D V + +++ IHG E ++ N
Sbjct: 382 EMEHY-GCMVDLFARAGLIDEAVRLIETMTVEPDPVMWATLLDACEIHGFVEMGEKIGNK 440
Query: 196 ML 197
++
Sbjct: 441 LI 442
>Medtr4g094502.1 | pentatricopeptide (PPR) repeat protein | HC |
chr4:38095334-38099255 | 20130731
Length = 653
Score = 238 bits (607), Expect = 7e-63, Method: Compositional matrix adjust.
Identities = 132/381 (34%), Positives = 208/381 (54%), Gaps = 40/381 (10%)
Query: 1 MPQRNVASWNAMLCGF----------------VKDG-------------------DLSSA 25
MP+RNV SW M+ + ++DG DL
Sbjct: 145 MPERNVVSWTTMISAYSYAKLNDRAMKLLVFMIRDGVMPNMYTFSSVLRACERLCDLKQV 204
Query: 26 R-GVFDAMPEKNVVSFTTMIDGYAKAGDMAAARFLFEQATEKDVVAWSALISGYVQNGQP 84
G+ A E +V + +ID Y+K G++ A +F + D V W+++I+ + Q+
Sbjct: 205 HSGILKAGLESDVFVRSALIDAYSKLGELLEAVGVFREMVTGDSVVWNSIIAAFAQHSDG 264
Query: 85 NQALKVFLEMESKNVKPDEFILVSLMSATSQLGHLELAQWVDSYVSKSSIDLQQDHVIAA 144
++AL ++ M + D+ L S++ A + LEL + V +V K DL ++ A
Sbjct: 265 DEALALYKSMRREGFPADQSTLTSVLRACTGSSLLELGRQVHVHVLKFDQDLILNN---A 321
Query: 145 LLDMNAKCGNMDRALKLFKEMPKRDLVSYCSMIQGLSIHGCGEDAVRLFNSMLMEGLVPD 204
LLDM KCG+++ A +F M +D++S+ +MI GL+ +G +A+ LF+SM + G P+
Sbjct: 322 LLDMYCKCGSLEDAKFIFSRMAVKDVISWSTMISGLAQNGFSVEALNLFDSMKVSGPRPN 381
Query: 205 EVAFTIILTACSHSGLVDEGWNYFQSMKQKYGISPSPDHFACMVDLLSRSGHLGDAYELM 264
+ +L ACSH+GLV+EGW YF+SMK YGI P +H++C++DLL R+G L + +L+
Sbjct: 382 YITILGVLFACSHAGLVNEGWGYFRSMKNLYGIDPGREHYSCLLDLLGRAGKLDEMVKLI 441
Query: 265 KSMH-EPHAGAWGALLGACKLHGDSDLGEIVANQLFELEPQNAANYILLSNIYAAAERWI 323
M EP W LL AC+ + DL A ++ +L+ Q+A Y+LLSNIYA ++RW
Sbjct: 442 HEMTCEPDVVTWRTLLDACRAQRNVDLATYAAKEILKLDQQDAGAYVLLSNIYANSKRWD 501
Query: 324 DVSLVRSRMRERSVQKIPGCS 344
DV+ VR M R ++K PGCS
Sbjct: 502 DVAEVRRTMSARGIRKEPGCS 522
>Medtr8g068150.1 | SLOW growth protein, putative | HC |
chr8:28404022-28408146 | 20130731
Length = 633
Score = 238 bits (606), Expect = 7e-63, Method: Compositional matrix adjust.
Identities = 135/346 (39%), Positives = 210/346 (60%), Gaps = 6/346 (1%)
Query: 5 NVASWNAMLCGFVKDGDLSSARGVFDAM-PEKNVVS-FTTMIDGYAKAGDMAAARFLFEQ 62
NV N ++ + K G L A V + P K+VV+ +T+++ YA G++ AR LF+Q
Sbjct: 255 NVLLVNKLVDMYAKCGRLVMAETVLSVVKPGKSVVAAWTSLVSAYALRGEVKVARRLFDQ 314
Query: 63 ATEKDVVAWSALISGYVQNGQPNQALKVFLEMESKNVKPDEFILVSLMSATSQLGHLELA 122
E+DVV+W+A+ISGY G +AL++F+++E +KPDE +V+ +SA ++LG LEL
Sbjct: 315 MGERDVVSWTAMISGYSHAGCFQEALELFVKLEGLGMKPDEVAVVAALSACARLGALELG 374
Query: 123 QWVD-SYVSKSSIDLQQDHVIAALLDMNAKCGNMDRALKLFKEMP--KRDLVSYCSMIQG 179
+ + Y ++ +A++DM AKCG++D AL +F++ K+ Y S+I G
Sbjct: 375 RRIHRQYAGENWTCSINRGFTSAVVDMYAKCGSIDIALDVFRKTSDDKKTTFLYNSIISG 434
Query: 180 LSIHGCGEDAVRLFNSMLMEGLVPDEVAFTIILTACSHSGLVDEGWNYFQSMKQKYGISP 239
L+ HG GE A LF M + GL PD + F +L+AC H GLVD G F+SM YG+SP
Sbjct: 435 LAHHGRGEYAKNLFEEMGLLGLKPDNITFVAVLSACGHCGLVDFGKKLFESMFTVYGVSP 494
Query: 240 SPDHFACMVDLLSRSGHLGDAYELMKSM-HEPHAGAWGALLGACKLHGDSDLGEIVANQL 298
+H+ CMVDLL R+GHL +A+ L+ M + +A W ALL ACK+HGD L + + +L
Sbjct: 495 EMEHYGCMVDLLGRAGHLDEAHRLILKMPFKANAVIWRALLSACKVHGDVALARVASYEL 554
Query: 299 FELEPQNAANYILLSNIYAAAERWIDVSLVRSRMRERSVQKIPGCS 344
EL+ + A Y++LSN+ + ++ + + +R + +QK PG S
Sbjct: 555 VELQHDHGAGYVMLSNMLSDTDQHDEAASLRKAIDNVGIQKPPGWS 600
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 89/350 (25%), Positives = 148/350 (42%), Gaps = 84/350 (24%)
Query: 10 NAML---CGFVKDGDLSSARGVFDAMPEKNVVSFTTMIDGYAKAGDMAAARFLFEQATEK 66
NA+L CGF GD+ +A VFD ++ VSF TMI+G+A+ GD++
Sbjct: 157 NALLNFYCGF---GDVVNAYKVFDESFVRDCVSFNTMINGFARKGDVSG----------- 202
Query: 67 DVVAWSALISGYVQNGQPNQALKVFLEMESKNVKPDEFILVSLMSATSQLGHLELAQWVD 126
+VF EM V+PDE+ V+L+S S L + + V
Sbjct: 203 --------------------CFRVFGEMRGVCVRPDEYTFVALLSGCSVLEDYRIGRQVH 242
Query: 127 SYVSKSSIDLQQDHVIA-ALLDMNAKCGNM------------------------------ 155
V + + ++ L+DM AKCG +
Sbjct: 243 GLVYRELGCFGGNVLLVNKLVDMYAKCGRLVMAETVLSVVKPGKSVVAAWTSLVSAYALR 302
Query: 156 ---DRALKLFKEMPKRDLVSYCSMIQGLSIHGCGEDAVRLFNSMLMEGLVPDEVAFTIIL 212
A +LF +M +RD+VS+ +MI G S GC ++A+ LF + G+ PDEVA L
Sbjct: 303 GEVKVARRLFDQMGERDVVSWTAMISGYSHAGCFQEALELFVKLEGLGMKPDEVAVVAAL 362
Query: 213 TACSHSGLVDEGWN-YFQSMKQKYGISPSPDHFACMVDLLSRSGHLGDAYELMKSMHEPH 271
+AC+ G ++ G + Q + + S + + +VD+ ++ G + A ++ + +
Sbjct: 363 SACARLGALELGRRIHRQYAGENWTCSINRGFTSAVVDMYAKCGSIDIALDVFRKTSDDK 422
Query: 272 AGA--WGALLGACKLHGDSDLGEIVANQLFE------LEPQNAANYILLS 313
+ +++ HG + A LFE L+P N +LS
Sbjct: 423 KTTFLYNSIISGLAHHGRGEY----AKNLFEEMGLLGLKPDNITFVAVLS 468
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 67/258 (25%), Positives = 115/258 (44%), Gaps = 27/258 (10%)
Query: 59 LFEQATEKDVVAWSALISGYVQ-NGQPNQALKVFLEMESKNVKPDEFILVSLMSATSQ-- 115
LF Q T D+ W+A+I Y Q + P +F M + +V PD F L+ A +
Sbjct: 71 LFTQITNPDIFLWNAIIKAYSQIHSPPQHPFSLFKTMLNSSVLPDSFTFPFLLKACANVL 130
Query: 116 LGHLELAQWVDSYVSKSSIDLQQDHVIAALLDMNAKCGNMDRALKLFKEMPKRDLVSYCS 175
+ + V +V ++ V ALL+ G++ A K+F E RD VS+ +
Sbjct: 131 ISAPQFGFQVHCHVLRNGFG-SDVFVNNALLNFYCGFGDVVNAYKVFDESFVRDCVSFNT 189
Query: 176 MIQGLSIHGCGEDAVRLFNSMLMEGLVPDEVAFTIILTACSHSGLVDEGWNYFQSMKQKY 235
MI G + G R+F M + PDE F +L+ CS ++++ ++ +Q +
Sbjct: 190 MINGFARKGDVSGCFRVFGEMRGVCVRPDEYTFVALLSGCS---VLED----YRIGRQVH 242
Query: 236 GISPSPDHFAC----------MVDLLSRSGHLGDAYELMKSMHEPH---AGAWGALLGAC 282
G+ C +VD+ ++ G L A E + S+ +P AW +L+ A
Sbjct: 243 GLVYR--ELGCFGGNVLLVNKLVDMYAKCGRLVMA-ETVLSVVKPGKSVVAAWTSLVSAY 299
Query: 283 KLHGDSDLGEIVANQLFE 300
L G+ + + +Q+ E
Sbjct: 300 ALRGEVKVARRLFDQMGE 317
>Medtr5g013950.1 | pentatricopeptide (PPR) repeat protein | HC |
chr5:4606693-4603955 | 20130731
Length = 735
Score = 238 bits (606), Expect = 8e-63, Method: Compositional matrix adjust.
Identities = 125/342 (36%), Positives = 203/342 (59%), Gaps = 5/342 (1%)
Query: 8 SWNAMLCGFVKDGDLSSARGVFDAMPEKNVVSFTTMIDGYAKAGDMAAARFLFEQA--TE 65
S+N+M+ G+V+ G L A+ +FD +P +N +++T MI GY AG + A LF+ ++
Sbjct: 366 SFNSMINGYVQAGQLHKAQELFDTVPIRNKIAWTCMISGYLSAGQVLKASNLFDDMPDSD 425
Query: 66 KDVVAWSALISGYVQNGQPNQALKVFLEMESKNVKPDEFILVSLMSATSQLGHLELAQWV 125
KD +AW+ +I GYVQN +A+ +F EM ++ P L A + +L+L +
Sbjct: 426 KDSIAWTLMIYGYVQNELIAEAINLFAEMMAQGASPINSTYAVLFGAVGSVAYLDLGWQL 485
Query: 126 DSYVSKSSIDLQQD-HVIAALLDMNAKCGNMDRALKLFKEMPKRDLVSYCSMIQGLSIHG 184
+ K+ + + D ++ +L+ M AKCG ++ A ++F M RD +S+ SMI GLS HG
Sbjct: 486 HAMQLKTIYEYEYDVYLENSLISMYAKCGEIEDAYRIFSNMNCRDKISWNSMIMGLSDHG 545
Query: 185 CGEDAVRLFNSMLMEGLVPDEVAFTIILTACSHSGLVDEGWNYFQSMKQKYGISPSPDHF 244
+A+ ++ +ML G+ PD V F +LTAC+H+G VD+G F M Y + P +H+
Sbjct: 546 RANEALNMYETMLEFGVYPDAVTFLGVLTACAHAGFVDKGCELFSVMLNDYALQPGLEHY 605
Query: 245 ACMVDLLSRSGHLGDAYELMKSMH-EPHAGAWGALLGACKL-HGDSDLGEIVANQLFELE 302
++++L R+G + DA E + + EP+ WGAL+G C L D+D+ A +L EL+
Sbjct: 606 VSIINILGRAGRVKDAEEFVLRLPVEPNHTIWGALIGVCGLSKTDADIARRAATRLLELD 665
Query: 303 PQNAANYILLSNIYAAAERWIDVSLVRSRMRERSVQKIPGCS 344
P NA ++ L NIYAA +R ++ + +R MR + V+K PGCS
Sbjct: 666 PLNAPGHVTLCNIYAANDRHLEETSLRREMRMKGVRKAPGCS 707
Score = 125 bits (315), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 70/221 (31%), Positives = 118/221 (53%), Gaps = 41/221 (18%)
Query: 1 MPQRNVASWNAMLCGFVKDGDLSSARGVFDAMPEKNVVSFTTMIDGYAKAGDMAAARFLF 60
MP+RNV SW AML G+ G + AR VFD MPE+NVVS+ +M+ G + GD+ AR +F
Sbjct: 129 MPERNVVSWTAMLSGYAGLGWIDDARKVFDEMPERNVVSWNSMVVGLIRNGDLEEARKVF 188
Query: 61 EQATEKDVVAWSALISGYVQNGQPNQALKVFLEMESKNVKPDEFILVSLMSATSQLGHLE 120
+ +K+VV+W+A+I GYV+NG+ + A +F ++E +NV
Sbjct: 189 DDTPDKNVVSWNAMIEGYVENGRMDDAKDLFDQIECRNV--------------------- 227
Query: 121 LAQWVDSYVSKSSIDLQQDHVIAALLDMNAKCGNMDRALKLFKEMPKRDLVSYCSMIQGL 180
W +++ + G+++ A +LF+ MP++++VS+ +MI G
Sbjct: 228 -ITW------------------TSMISGYCRVGDVNEAFRLFQIMPEKNVVSWTAMIGGF 268
Query: 181 SIHGCGEDAVRLF-NSMLMEGLVPDEVAFTIILTACSHSGL 220
+ +G +A+ LF + M + P+E F ++ AC+ G
Sbjct: 269 AWNGFYREALLLFLDMMTLSDAKPNEETFVSLVYACAGMGF 309
Score = 95.1 bits (235), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 77/313 (24%), Positives = 141/313 (45%), Gaps = 57/313 (18%)
Query: 13 LCGFVKDGDLSSARGVFDAMPEKN----VVSFTTMIDGYAKAGDMAAARFLFEQATEKDV 68
L ++ +G L AR + + P N VV +T+M+ YAK G + AR LF+ +++
Sbjct: 44 LLHYLTNGFLHEARTILHSFPSGNIHSRVVHWTSMLTNYAKHGYVEQARNLFDIMPHRNI 103
Query: 69 VAWSALISGYVQNGQPNQALKVFLEMESKNVKPDEFILVSLMSATSQLGHLELAQWVDSY 128
V ++A++S Y+Q+G QA + F +M +NV W
Sbjct: 104 VTYNAMLSAYLQSGMTRQAKRFFDDMPERNV----------------------VSW---- 137
Query: 129 VSKSSIDLQQDHVIAALLDMNAKCGNMDRALKLFKEMPKRDLVSYCSMIQGLSIHGCGED 188
A+L A G +D A K+F EMP+R++VS+ SM+ GL +G E+
Sbjct: 138 --------------TAMLSGYAGLGWIDDARKVFDEMPERNVVSWNSMVVGLIRNGDLEE 183
Query: 189 AVRLFNSMLMEGLVPDE--VAFTIILTACSHSGLVDEGWNYFQSMKQKYGISPSPDHFAC 246
A ++F+ PD+ V++ ++ +G +D+ + F ++ + I+ +
Sbjct: 184 ARKVFDD------TPDKNVVSWNAMIEGYVENGRMDDAKDLFDQIECRNVIT-----WTS 232
Query: 247 MVDLLSRSGHLGDAYELMKSMHEPHAGAWGALLGACKLHGDSDLGEIVANQLFELEPQNA 306
M+ R G + +A+ L + M E + +W A++G +G ++ + L
Sbjct: 233 MISGYCRVGDVNEAFRLFQIMPEKNVVSWTAMIGGFAWNGFYREALLLFLDMMTLSDAKP 292
Query: 307 ANYILLSNIYAAA 319
+S +YA A
Sbjct: 293 NEETFVSLVYACA 305
>Medtr2g013500.1 | PPR containing plant-like protein | HC |
chr2:3639056-3640975 | 20130731
Length = 515
Score = 238 bits (606), Expect = 8e-63, Method: Compositional matrix adjust.
Identities = 126/333 (37%), Positives = 202/333 (60%), Gaps = 5/333 (1%)
Query: 15 GFVKDGDLSSARGVFDAMPEKNVVSFTTMIDGYAKAGDMAAARFLFEQATEKDVVAWSAL 74
G +K G A G+ M + N+V + +D YAK G + AR +F + +++DV++W+ L
Sbjct: 170 GAIKFGKAIHAYGLKSLMIDGNIVFYNAALDLYAKCGFFSNARNVFVKMSKRDVISWTTL 229
Query: 75 ISGYVQNGQPNQALKVFLEM-ESKNVKPDEFILVSLMSATSQLGHLELAQWVDSYVSKSS 133
+ Y + GQ +A++VF +M S +P+E +V+++SA + +G L L WV Y+ K
Sbjct: 230 LMAYARGGQCGEAVEVFKQMIVSGEAEPNESTVVTVLSACASIGSLSLGCWVHDYIEKR- 288
Query: 134 IDLQQDHVIA-ALLDMNAKCGNMDRALKLFKEMPKRDLVSYCSMIQGLSIHGCGEDAVRL 192
IDL D I AL++M KCG+M LK+F + +D++S+ ++I GL+++G G+ V++
Sbjct: 289 IDLDVDGNIGNALVNMYVKCGDMKMGLKVFNMVVHKDVISWGTVICGLAMNGYGKQVVQM 348
Query: 193 FNSMLMEGLVPDEVAFTIILTACSHSGLVDEGWNYFQSMKQKYGISPSPDHFACMVDLLS 252
F+ ML+ G++PD+V F +L+ACSH GLV EG +F++M+ YGI P H+ CMVD+
Sbjct: 349 FSHMLVHGVLPDDVTFIGLLSACSHVGLVSEGMMFFKAMRDSYGIVPQMSHYGCMVDMYG 408
Query: 253 RSGHLGDAYELMKSMH-EPHAGAWGALLGACKLHGDSDLGEIVANQLFELEPQNAANYIL 311
R+ +A +K M E W ALL ACK HG+ ++ E + Q+ + + L
Sbjct: 409 RASLFEEAVAFLKGMPVEAEGPIWSALLQACKTHGNEEMSEWIRGQIHD-KNVGVGTLAL 467
Query: 312 LSNIYAAAERWIDVSLVRSRMRERSVQKIPGCS 344
LSNIYA++ERW D + VR MR ++K+ G S
Sbjct: 468 LSNIYASSERWDDANNVRKIMRGTGLKKVAGLS 500
Score = 99.8 bits (247), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 68/261 (26%), Positives = 130/261 (49%), Gaps = 12/261 (4%)
Query: 28 VFDAMPEKNVVSFTTMIDGYAKAGDMAAARFLFEQATEKDVVAWSALISGYVQNGQPNQA 87
+FD + ++ F Y + D+ +A +F+ DVV+W++LISG + G +A
Sbjct: 90 IFDGFIKNTLLYF------YLSSNDVVSATRVFKSIPSPDVVSWTSLISGLSKCGFETEA 143
Query: 88 LKVFLEMESKNVKPDEFILVSLMSATSQLGHLELAQWVDSYVSKSSIDLQQDHVIAALLD 147
++ F S NVKP+ LVS +SA S +G ++ + + +Y KS + A LD
Sbjct: 144 IEAF---SSINVKPNALTLVSAISACSSIGAIKFGKAIHAYGLKSLMIDGNIVFYNAALD 200
Query: 148 MNAKCGNMDRALKLFKEMPKRDLVSYCSMIQGLSIHG-CGEDAVRLFNSMLMEGLV-PDE 205
+ AKCG A +F +M KRD++S+ +++ + G CGE AV +F M++ G P+E
Sbjct: 201 LYAKCGFFSNARNVFVKMSKRDVISWTTLLMAYARGGQCGE-AVEVFKQMIVSGEAEPNE 259
Query: 206 VAFTIILTACSHSGLVDEGWNYFQSMKQKYGISPSPDHFACMVDLLSRSGHLGDAYELMK 265
+L+AC+ G + G ++++ + + +V++ + G + ++
Sbjct: 260 STVVTVLSACASIGSLSLGCWVHDYIEKRIDLDVDGNIGNALVNMYVKCGDMKMGLKVFN 319
Query: 266 SMHEPHAGAWGALLGACKLHG 286
+ +WG ++ ++G
Sbjct: 320 MVVHKDVISWGTVICGLAMNG 340
>Medtr4g023510.1 | PPR containing plant-like protein | HC |
chr4:7953334-7955464 | 20130731
Length = 494
Score = 237 bits (605), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 122/332 (36%), Positives = 201/332 (60%), Gaps = 9/332 (2%)
Query: 20 GDLSSARGVFDAMPEKNVVSFTTMIDGYAKAGDMAAARFLFEQATEKDVVAWSALISGYV 79
G L A VF MP++N V++ I G K G + AR +F++ + VV+W+ +I GY
Sbjct: 163 GFLVDAAQVFGEMPDRNTVTWNVFISGLIKWGQLEFARSVFDRMVVRSVVSWTLVIDGYT 222
Query: 80 QNGQPNQALKVFLEM-ESKNVKPDEFILVSLMSATSQLGHLELAQWVDSYVSKSSIDLQQ 138
+ +P +AL +F +M E ++P+E L+++ A + LG++++ + V YV K +
Sbjct: 223 RMNKPLKALALFRKMIEVDGIEPNEVTLLTVFPAIAHLGNVKMCESVHGYVEKRGFNAVD 282
Query: 139 DHVIAALLDMNAKCGNMDRALKLFKEMP--KRDLVSYCSMIQGLSIHGCGEDAVRLFNSM 196
++ AL+D+ AKCG ++ A LF EMP +R+ VS+ S++ G + G +AV F M
Sbjct: 283 IRIVNALIDLYAKCGCIESASGLFSEMPDWRRNSVSWNSVMSGYATFGMVREAVDTFEKM 342
Query: 197 LMEGLVPDEVAFTIILTACSHSGLVDEGWNYFQSMKQKYGISPSPDHFACMVDLLSRSGH 256
G+ P+ VAF IL+ACSHSGLV+EG +F M YG+ P H+ C++D+L R+G
Sbjct: 343 EKAGVRPNHVAFLSILSACSHSGLVEEGLEFFGKMVNDYGLVPDIKHYGCVIDMLGRAGR 402
Query: 257 LGDAYELMKSMHEPHAGA----WGALLGACKLHGDSDLGEIVANQLFELEPQNAANYILL 312
LG+A ++ ++ PH A W LLGAC +H + ++G+ V ++ E+E + +Y+L+
Sbjct: 403 LGEAEKV--ALEVPHEAANDVIWRTLLGACSVHDNVEIGKRVTKKILEMEKGHGGDYVLM 460
Query: 313 SNIYAAAERWIDVSLVRSRMRERSVQKIPGCS 344
SNI+A+ R+ DV +R + +R+V K+PG S
Sbjct: 461 SNIFASVGRFKDVERLREMIDKRNVFKLPGYS 492
>Medtr2g015530.1 | pentatricopeptide (PPR) repeat protein | HC |
chr2:4610013-4612058 | 20130731
Length = 520
Score = 237 bits (605), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 124/339 (36%), Positives = 206/339 (60%), Gaps = 5/339 (1%)
Query: 10 NAMLCGFVKDGDLSSARGVFDAMPEKNVVSFTTMIDGYAKAGDMAAARFLFEQATEKDVV 69
A++ +VK+G + R VFD M EKNV+S T++I GY G A ++F + +KDVV
Sbjct: 181 TALIDSYVKNGRVGYGRTVFDVMSEKNVISSTSLISGYMNKGFFDDAEYIFRKTLDKDVV 240
Query: 70 AWSALISGYVQNGQ-PNQALKVFLEMESKNVKPDEFILVSLMSATSQLGHLELAQWVDSY 128
++A+I GY + + ++L+V+++M+ N +P+ S++ A S L E+ + V +
Sbjct: 241 VFNAMIEGYSKVSEYAMRSLEVYIDMQRLNFRPNLSTFASIIGACSVLAAFEIGEQVQAQ 300
Query: 129 VSKSSIDLQQDHVIAALLDMNAKCGNMDRALKLFKEMPKRDLVSYCSMIQGLSIHGCGED 188
+ K+ + +AL+DM +KCG + A ++F M ++++ S+ SMI G +G ++
Sbjct: 301 LMKTPF-FAVIKLGSALIDMYSKCGRVIDAQRVFDHMLEKNVFSWTSMIDGYGKNGFPDE 359
Query: 189 AVRLFNSMLME-GLVPDEVAFTIILTACSHSGLVDEGWNYFQSMKQKYGISPSPDHFACM 247
A+ LF M +E + P+ V F LTAC+H+GLV+ GW FQSM+ +Y + P +H+ACM
Sbjct: 360 ALELFKKMQIEYSITPNFVTFLSALTACAHAGLVERGWEIFQSMESEYKLKPRMEHYACM 419
Query: 248 VDLLSRSGHLGDAYELMKSMHE-PHAGAWGALLGACKLHGDSDLGEIVANQLFELEPQ-N 305
VDLL R+G L A+E + M E P++ W ALL +C++HG+ ++ ++ AN+LF+L
Sbjct: 420 VDLLGRAGWLNQAWEFVTRMPERPNSDVWLALLSSCRIHGNIEMAKLAANELFKLNAYGR 479
Query: 306 AANYILLSNIYAAAERWIDVSLVRSRMRERSVQKIPGCS 344
Y+ LSN A A +W +VS +R M+E+ + K CS
Sbjct: 480 PGAYVALSNTLADAGKWDNVSELREVMKEKGISKDTACS 518
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 72/300 (24%), Positives = 138/300 (46%), Gaps = 49/300 (16%)
Query: 47 YAKAGDMAAARFLFEQATEKDVVAWSALISGYVQNGQPNQALKVFLEMESKNVKPDEFIL 106
Y K+ + AR +F+ ++ + A++ +I GY++NGQ +++L +F ++ KPD F
Sbjct: 82 YIKSHSLRYARQVFDDLHDRTLSAYNYMIGGYLKNGQVDESLDLFHQLSVSGEKPDGFTF 141
Query: 107 VSLMSATSQ------LGHLELAQWVDSYVSKSSIDLQQDHVI-AALLDMNAKCGNMDRAL 159
++ A++ +G +L + V + + K D+++D V+ AL+D K G +
Sbjct: 142 SMILKASTNRVSNGMVG--DLGRMVHAQILK--FDVEKDDVLCTALIDSYVKNGRVGYGR 197
Query: 160 KLFKEMPKRDLVSYCSMIQGLSIHGCGEDAVRLFNSMLMEGLVPDEVAFTIILTACSHSG 219
+F M +++++S S+I G G +DA +F L + D V F ++
Sbjct: 198 TVFDVMSEKNVISSTSLISGYMNKGFFDDAEYIFRKTLDK----DVVVFNAMI------- 246
Query: 220 LVDEGWNYFQSMKQKYGISPSPDHFACMVDLLSRSGHLGDAYELMKSMHEPHAGAWGALL 279
EG+ S +Y + RS L ++ + P+ + +++
Sbjct: 247 ---EGY----SKVSEYAM---------------RS--LEVYIDMQRLNFRPNLSTFASII 282
Query: 280 GACKLHGDSDLGEIVANQLFELEPQNAANYI--LLSNIYAAAERWIDVSLVRSRMRERSV 337
GAC + ++GE V QL + P A + L ++Y+ R ID V M E++V
Sbjct: 283 GACSVLAAFEIGEQVQAQLMK-TPFFAVIKLGSALIDMYSKCGRVIDAQRVFDHMLEKNV 341
>Medtr8g105210.1 | PPR containing plant-like protein | HC |
chr8:44370221-44373841 | 20130731
Length = 959
Score = 237 bits (604), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 121/299 (40%), Positives = 182/299 (60%), Gaps = 2/299 (0%)
Query: 47 YAKAGDMAAARFLFEQATEKDVVAWSALISGYVQNGQPNQALKVFLEMESKNVKPDEFIL 106
YAK+G + A F + KD V W+ +I + QNG+P A+ +F +M + K D L
Sbjct: 525 YAKSGRLDLAYQFFRRMPVKDSVCWNLMIVSFSQNGKPELAIDLFRQMGTSGTKFDSVSL 584
Query: 107 VSLMSATSQLGHLELAQWVDSYVSKSSIDLQQDHVIAALLDMNAKCGNMDRALKLFKEMP 166
+ +SA + L + + +V ++S + V + L+DM +KCG + A +F M
Sbjct: 585 SATLSACANYPALYYGKELHCFVVRNSF-ISDTFVASTLIDMYSKCGKLALARSVFDMMD 643
Query: 167 KRDLVSYCSMIQGLSIHGCGEDAVRLFNSMLMEGLVPDEVAFTIILTACSHSGLVDEGWN 226
++ VS+ S+I HG + + LF+ M+ G+ PD V F +I++AC H+GLVDEG
Sbjct: 644 WKNEVSWNSIIAAYGNHGRPRECLDLFHEMVEAGIQPDHVTFLVIMSACGHAGLVDEGIY 703
Query: 227 YFQSMKQKYGISPSPDHFACMVDLLSRSGHLGDAYELMKSM-HEPHAGAWGALLGACKLH 285
YF+ M ++YGI +HFACMVDL R+G L +A++ +KSM P AG WG+LLGAC+LH
Sbjct: 704 YFRCMTEEYGICARMEHFACMVDLYGRAGRLHEAFDTIKSMPFTPDAGTWGSLLGACRLH 763
Query: 286 GDSDLGEIVANQLFELEPQNAANYILLSNIYAAAERWIDVSLVRSRMRERSVQKIPGCS 344
G+ +L ++ + L EL+P N+ Y+LLSN++A A W V VRS M+E+ VQKIPG S
Sbjct: 764 GNVELAKLASKHLVELDPNNSGYYVLLSNVHAGAGEWESVLKVRSLMKEKGVQKIPGYS 822
Score = 124 bits (312), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 86/329 (26%), Positives = 154/329 (46%), Gaps = 41/329 (12%)
Query: 1 MPQRNVASWNAMLCGFVKDGDLSSARGVFDAMP----EKNVVSFT--------------- 41
+P R+ WN ML G+VK+GD +SA G F M + N VSF
Sbjct: 238 LPVRDCILWNVMLNGYVKNGDFNSALGTFQEMRNSCVKPNSVSFVCLLSVCATRGIVRAG 297
Query: 42 --------------------TMIDGYAKAGDMAAARFLFEQATEKDVVAWSALISGYVQN 81
T+I Y+K G++ AR +F+ + D V W+ LI+GYVQN
Sbjct: 298 IQLHGLVIRSGFESDPTVANTIITMYSKCGNLFDARKIFDIMPQTDTVTWNGLIAGYVQN 357
Query: 82 GQPNQALKVFLEMESKNVKPDEFILVSLMSATSQLGHLELAQWVDSYVSKSSIDLQQDHV 141
G ++A+ +F M + VK D S + + + G L+ + V SY+ + + ++
Sbjct: 358 GFTDEAVALFKAMVTSGVKLDSITFASFLPSVLKSGSLKYCKEVHSYIVRHGVPFDV-YL 416
Query: 142 IAALLDMNAKCGNMDRALKLFKEMPKRDLVSYCSMIQGLSIHGCGEDAVRLFNSMLMEGL 201
+AL+D+ K G+++ A K F++ D+ +MI G ++G +A+ LF ++ EG+
Sbjct: 417 KSALVDIYFKGGDVEMACKTFQQNTLVDVAVCTAMISGYVLNGLNVEALNLFRWLIQEGM 476
Query: 202 VPDEVAFTIILTACSHSGLVDEGWNYFQSMKQKYGISPSPDHFACMVDLLSRSGHLGDAY 261
VP+ + +L AC+ + G + +K G+ + + + ++SG L AY
Sbjct: 477 VPNCLTMASVLPACAALASLKLGKELHCDILKK-GLENVCQVGSSITYMYAKSGRLDLAY 535
Query: 262 ELMKSMHEPHAGAWGALLGACKLHGDSDL 290
+ + M + W ++ + +G +L
Sbjct: 536 QFFRRMPVKDSVCWNLMIVSFSQNGKPEL 564
Score = 105 bits (261), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 85/327 (25%), Positives = 147/327 (44%), Gaps = 45/327 (13%)
Query: 1 MPQRNVASWNAMLCGFVKDGDLSSARGVFDAMPEKNV----VSFTT-------------- 42
MPQ + +WN ++ G+V++G A +F AM V ++F +
Sbjct: 339 MPQTDTVTWNGLIAGYVQNGFTDEAVALFKAMVTSGVKLDSITFASFLPSVLKSGSLKYC 398
Query: 43 ---------------------MIDGYAKAGDMAAARFLFEQATEKDVVAWSALISGYVQN 81
++D Y K GD+ A F+Q T DV +A+ISGYV N
Sbjct: 399 KEVHSYIVRHGVPFDVYLKSALVDIYFKGGDVEMACKTFQQNTLVDVAVCTAMISGYVLN 458
Query: 82 GQPNQALKVFLEMESKNVKPDEFILVSLMSATSQLGHLELAQWVDSYVSKSSIDLQQDHV 141
G +AL +F + + + P+ + S++ A + L L+L + + + K ++ V
Sbjct: 459 GLNVEALNLFRWLIQEGMVPNCLTMASVLPACAALASLKLGKELHCDILKKGLE-NVCQV 517
Query: 142 IAALLDMNAKCGNMDRALKLFKEMPKRDLVSYCSMIQGLSIHGCGEDAVRLFNSMLMEGL 201
+++ M AK G +D A + F+ MP +D V + MI S +G E A+ LF M G
Sbjct: 518 GSSITYMYAKSGRLDLAYQFFRRMPVKDSVCWNLMIVSFSQNGKPELAIDLFRQMGTSGT 577
Query: 202 VPDEVAFTIILTACSHSGLVDEGWNYFQSMKQKYGISPSPDHF--ACMVDLLSRSGHLGD 259
D V+ + L+AC++ + G + + IS D F + ++D+ S+ G L
Sbjct: 578 KFDSVSLSATLSACANYPALYYGKELHCFVVRNSFIS---DTFVASTLIDMYSKCGKLAL 634
Query: 260 AYELMKSMHEPHAGAWGALLGACKLHG 286
A + M + +W +++ A HG
Sbjct: 635 ARSVFDMMDWKNEVSWNSIIAAYGNHG 661
Score = 100 bits (250), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 56/180 (31%), Positives = 97/180 (53%), Gaps = 3/180 (1%)
Query: 41 TTMIDGYAKAGDMAAARFLFEQATEKDVVAWSALISGYVQNGQPNQALKVFLEMESKNVK 100
+++I Y G + A++LF++ +D + W+ +++GYV+NG N AL F EM + VK
Sbjct: 216 SSLIKLYTDNGYIHDAKYLFDELPVRDCILWNVMLNGYVKNGDFNSALGTFQEMRNSCVK 275
Query: 101 PDEFILVSLMSATSQLGHLELAQWVDSYVSKSSIDLQQDHVIA-ALLDMNAKCGNMDRAL 159
P+ V L+S + G + + V +S + D +A ++ M +KCGN+ A
Sbjct: 276 PNSVSFVCLLSVCATRGIVRAGIQLHGLVIRSG--FESDPTVANTIITMYSKCGNLFDAR 333
Query: 160 KLFKEMPKRDLVSYCSMIQGLSIHGCGEDAVRLFNSMLMEGLVPDEVAFTIILTACSHSG 219
K+F MP+ D V++ +I G +G ++AV LF +M+ G+ D + F L + SG
Sbjct: 334 KIFDIMPQTDTVTWNGLIAGYVQNGFTDEAVALFKAMVTSGVKLDSITFASFLPSVLKSG 393
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 55/222 (24%), Positives = 98/222 (44%), Gaps = 4/222 (1%)
Query: 69 VAWSALISGYVQNGQPNQALKVFLEMESKNVKPDEFILVSLMSATSQLGHLELAQWVDSY 128
+ W+ LI G+ G + AL F M NV PD++ ++ A L ++ L + V
Sbjct: 143 LPWNWLIRGFSMLGCFDFALMFFFRMLGSNVAPDKYTFPYVIKACGGLNNVPLCKMVHEL 202
Query: 129 VSKSSIDLQQDHVI-AALLDMNAKCGNMDRALKLFKEMPKRDLVSYCSMIQGLSIHGCGE 187
S+ D I ++L+ + G + A LF E+P RD + + M+ G +G
Sbjct: 203 AR--SMGFHMDLFIGSSLIKLYTDNGYIHDAKYLFDELPVRDCILWNVMLNGYVKNGDFN 260
Query: 188 DAVRLFNSMLMEGLVPDEVAFTIILTACSHSGLVDEGWNYFQSMKQKYGISPSPDHFACM 247
A+ F M + P+ V+F +L+ C+ G+V G + + G P +
Sbjct: 261 SALGTFQEMRNSCVKPNSVSFVCLLSVCATRGIVRAGIQ-LHGLVIRSGFESDPTVANTI 319
Query: 248 VDLLSRSGHLGDAYELMKSMHEPHAGAWGALLGACKLHGDSD 289
+ + S+ G+L DA ++ M + W L+ +G +D
Sbjct: 320 ITMYSKCGNLFDARKIFDIMPQTDTVTWNGLIAGYVQNGFTD 361
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 49/175 (28%), Positives = 92/175 (52%), Gaps = 5/175 (2%)
Query: 41 TTMIDGYAKAGDMAAARFLFEQATEKDVVAWSALISGYVQNGQPNQALKVFLEMESKNVK 100
+T+ID Y+K G +A AR +F+ K+ V+W+++I+ Y +G+P + L +F EM ++
Sbjct: 620 STLIDMYSKCGKLALARSVFDMMDWKNEVSWNSIIAAYGNHGRPRECLDLFHEMVEAGIQ 679
Query: 101 PDEFILVSLMSATSQLGHL-ELAQWVDSYVSKSSIDLQQDHVIAALLDMNAKCGNMDRAL 159
PD + +MSA G + E + + I + +H A ++D+ + G + A
Sbjct: 680 PDHVTFLVIMSACGHAGLVDEGIYYFRCMTEEYGICARMEH-FACMVDLYGRAGRLHEAF 738
Query: 160 KLFKEMP-KRDLVSYCSMIQGLSIHGCGEDAVRLFNSMLMEGLVPDEVAFTIILT 213
K MP D ++ S++ +HG E A +L + L+E L P+ + ++L+
Sbjct: 739 DTIKSMPFTPDAGTWGSLLGACRLHGNVELA-KLASKHLVE-LDPNNSGYYVLLS 791
>Medtr1g059720.1 | organelle transcript processing protein, putative
| HC | chr1:25973337-25971195 | 20130731
Length = 574
Score = 237 bits (604), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 129/383 (33%), Positives = 213/383 (55%), Gaps = 44/383 (11%)
Query: 1 MPQRNVASWNAMLCGFVKDGDLSSARGVF------DAMPEKNVVSFT------------- 41
MP R+ +W+ M+ GF K GD ++ F + P+ + F
Sbjct: 61 MPTRDPTTWSIMVGGFSKLGDYNNCYATFREILRCNITPDNYTLPFVIRACRDRKDIQMG 120
Query: 42 --------------------TMIDGYAKAGDMAAARFLFEQATEKDVVAWSALISGYVQN 81
T++D YAK + AR LF+ KD+V W+ +I Y +
Sbjct: 121 RMIHDVVLKYGLVLDHFVCATLVDMYAKCAVIEDARKLFDVMVSKDLVTWTVMIGCYA-D 179
Query: 82 GQPNQALKVFLEMESKNVKPDEFILVSLMSATSQLGHLELAQWVDSYVSKSSIDLQQDHV 141
++L +F + + D+ +V++++A ++LG + A++V+ Y+ + + L D +
Sbjct: 180 YDAYESLVLFDRLREEGFVSDKVAMVTVVNACAKLGAMHRARFVNEYICGNGLSL--DVI 237
Query: 142 I-AALLDMNAKCGNMDRALKLFKEMPKRDLVSYCSMIQGLSIHGCGEDAVRLFNSMLMEG 200
+ A++DM AKCG +D A ++F M +++++S+ +MI HG G++A+ LF+ ML G
Sbjct: 238 LGTAMIDMYAKCGCVDSAREVFDRMKEKNVISWSAMIAAYGYHGKGKEALDLFHMMLSCG 297
Query: 201 LVPDEVAFTIILTACSHSGLVDEGWNYFQSMKQKYGISPSPDHFACMVDLLSRSGHLGDA 260
+ P+ + F +L ACSHSGL DEG ++F SM + YG+ P H+ C+VDLL R+G L +A
Sbjct: 298 ISPNRITFVSLLYACSHSGLTDEGLHFFDSMWRDYGVRPDVKHYTCVVDLLGRAGRLDEA 357
Query: 261 YELMKSMH-EPHAGAWGALLGACKLHGDSDLGEIVANQLFELEPQNAANYILLSNIYAAA 319
+L+++M+ E W ALLGAC++HG+ +L VA L EL+P+N Y+LLSNIYA A
Sbjct: 358 LKLIETMNVEKDERLWSALLGACRVHGNMELAGKVAESLLELQPKNPGIYVLLSNIYAKA 417
Query: 320 ERWIDVSLVRSRMRERSVQKIPG 342
+W V R M +R ++K+PG
Sbjct: 418 GKWEKVGEFRDLMTQRKLKKVPG 440
Score = 103 bits (258), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 68/252 (26%), Positives = 120/252 (47%), Gaps = 5/252 (1%)
Query: 36 NVVSFTTMIDGYAKAGDMAAARFLFEQATEKDVVAWSALISGYVQNGQPNQALKVFLEME 95
N++ ++ Y + + A +LF++ +D WS ++ G+ + G N F E+
Sbjct: 34 NLIVANKLLHFYVQHKAINDAYYLFDEMPTRDPTTWSIMVGGFSKLGDYNNCYATFREIL 93
Query: 96 SKNVKPDEFILVSLMSATSQLGHLELAQWVDSYVSKSSIDLQQDH-VIAALLDMNAKCGN 154
N+ PD + L ++ A +++ + + V K + L DH V A L+DM AKC
Sbjct: 94 RCNITPDNYTLPFVIRACRDRKDIQMGRMIHDVVLKYGLVL--DHFVCATLVDMYAKCAV 151
Query: 155 MDRALKLFKEMPKRDLVSYCSMIQGLSIHGCGEDAVRLFNSMLMEGLVPDEVAFTIILTA 214
++ A KLF M +DLV++ MI + + E V LF+ + EG V D+VA ++ A
Sbjct: 152 IEDARKLFDVMVSKDLVTWTVMIGCYADYDAYESLV-LFDRLREEGFVSDKVAMVTVVNA 210
Query: 215 CSHSGLVDEGWNYFQSMKQKYGISPSPDHFACMVDLLSRSGHLGDAYELMKSMHEPHAGA 274
C+ G + + G+S M+D+ ++ G + A E+ M E + +
Sbjct: 211 CAKLGAMHRA-RFVNEYICGNGLSLDVILGTAMIDMYAKCGCVDSAREVFDRMKEKNVIS 269
Query: 275 WGALLGACKLHG 286
W A++ A HG
Sbjct: 270 WSAMIAAYGYHG 281
>Medtr1g103660.1 | PPR containing plant-like protein | HC |
chr1:46920306-46922872 | 20130731
Length = 684
Score = 237 bits (604), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 136/389 (34%), Positives = 226/389 (58%), Gaps = 49/389 (12%)
Query: 1 MPQRNVASWNAMLCGFVKDG---DLSSARGVFDAMP-EKNVVSFTT-------------- 42
MP RN+A+WNA + V+D D+ +A F + E N ++F
Sbjct: 169 MPHRNLATWNAYISNAVQDRRSLDVIAAFKEFLCVHGEPNSITFCAFLNACVDMMRLNLG 228
Query: 43 ---------------------MIDGYAKAGDMAAARFLFEQ-ATEKDVVAWSALISGYVQ 80
+ID Y K GD+ +A +F + K+VV+W ++++ VQ
Sbjct: 229 RQLHAFIVRCGYKEDVSVANGLIDFYGKCGDIVSAEMVFSRIGNRKNVVSWCSMLTALVQ 288
Query: 81 NGQPNQALKVFLEMESKNVKPDEFILVSLMSATSQLGHLELAQWVDSYVSKSSIDLQQDH 140
N + +A VFL++ K V+P +F++ S++SA ++LG LEL + V + K+ + +D+
Sbjct: 289 NHEEERACMVFLQVR-KEVEPTDFMISSVLSACAELGGLELGRSVHALAVKACV---KDN 344
Query: 141 VI--AALLDMNAKCGNMDRALKLFKEMPKRDLVSYCSMIQGLSIHGCGEDAVRLFNSMLM 198
+ +AL+D+ KCG+++ A ++F E+P+ +LV++ +MI G + G + A+RLF M +
Sbjct: 345 IFVGSALVDLYGKCGSIENAEQVFSELPESNLVTWNAMIGGYAHQGDIDMALRLFEEMTL 404
Query: 199 --EGLVPDEVAFTIILTACSHSGLVDEGWNYFQSMKQKYGISPSPDHFACMVDLLSRSGH 256
G+ P V IL+ CS G V+ G F+SM+ YGI P +HFAC+VDLL RSG
Sbjct: 405 GSRGIRPSYVTLVSILSVCSRVGAVERGIQIFESMRLNYGIEPGAEHFACVVDLLGRSGL 464
Query: 257 LGDAYELMKSMH-EPHAGAWGALLGACKLHGDSDLGEIVANQLFELEPQNAANYILLSNI 315
+ AYE +++M +P WGALLGAC++HG ++LG+I A +LFEL+ ++ N+++LSN+
Sbjct: 465 VDRAYEFIQNMPIQPTISVWGALLGACRMHGKTELGKIAAEKLFELDHVDSGNHVVLSNM 524
Query: 316 YAAAERWIDVSLVRSRMRERSVQKIPGCS 344
A+A RW + ++VR M++ ++K G S
Sbjct: 525 LASAGRWEEATVVRKEMKDIGIKKNVGYS 553
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 61/261 (23%), Positives = 126/261 (48%), Gaps = 10/261 (3%)
Query: 42 TMIDGYAKAGDMAAARFLFEQATEKDVVAWSALISGYVQNGQPNQALKVFLEMESKNVKP 101
+ D Y K G A +F++ +++ W+A IS VQ+ + + F E + +P
Sbjct: 148 SCFDMYCKTGFHGDACNMFDEMPHRNLATWNAYISNAVQDRRSLDVIAAFKEFLCVHGEP 207
Query: 102 DEFILVSLMSATSQLGHLELAQWVDSYVSKSSIDLQQDHVIA-ALLDMNAKCGNMDRALK 160
+ + ++A + L L + + +++ + ++D +A L+D KCG++ A
Sbjct: 208 NSITFCAFLNACVDMMRLNLGRQLHAFIVRCG--YKEDVSVANGLIDFYGKCGDIVSAEM 265
Query: 161 LFKEMPKR-DLVSYCSMIQGLSIHGCGEDAVRLFNSMLMEGLVPDEVAFTIILTACSHSG 219
+F + R ++VS+CSM+ L + E A +F + E + P + + +L+AC+ G
Sbjct: 266 VFSRIGNRKNVVSWCSMLTALVQNHEEERACMVFLQVRKE-VEPTDFMISSVLSACAELG 324
Query: 220 LVDEGWNYFQSMKQKYGISPSPDHFACMVDLLSRSGHLGDAYELMKSMHEPHAGAWGALL 279
++ G + ++ K + + + +VDL + G + +A ++ + E + W A++
Sbjct: 325 GLELGRS-VHALAVKACVKDNIFVGSALVDLYGKCGSIENAEQVFSELPESNLVTWNAMI 383
Query: 280 GACKLHGDSDLGEIVANQLFE 300
G GD D+ A +LFE
Sbjct: 384 GGYAHQGDIDM----ALRLFE 400
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 43/173 (24%), Positives = 75/173 (43%), Gaps = 1/173 (0%)
Query: 43 MIDGYAKAGDMAAARFLFEQATEKDVVAWSALISGYVQNGQPNQALKVFLEMESKNVKPD 102
+++ Y+K + +A+ + + VV W++LISG V N + AL F M NV+P+
Sbjct: 48 LVNMYSKLDLLNSAQHVLSFTHLRTVVTWTSLISGCVHNRRFLPALLHFTNMRRDNVQPN 107
Query: 103 EFILVSLMSATSQLGHLELAQWVDSYVSKSSIDLQQDHVIAALLDMNAKCGNMDRALKLF 162
+F + A++ + + + K + + V + DM K G A +F
Sbjct: 108 DFTFPCVFKASALMQIPMTGKQIHGLALKGGM-IYDVFVGCSCFDMYCKTGFHGDACNMF 166
Query: 163 KEMPKRDLVSYCSMIQGLSIHGCGEDAVRLFNSMLMEGLVPDEVAFTIILTAC 215
EMP R+L ++ + I D + F L P+ + F L AC
Sbjct: 167 DEMPHRNLATWNAYISNAVQDRRSLDVIAAFKEFLCVHGEPNSITFCAFLNAC 219
>Medtr2g058990.1 | pentatricopeptide (PPR) repeat protein | HC |
chr2:24361845-24364937 | 20130731
Length = 975
Score = 237 bits (604), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 132/384 (34%), Positives = 203/384 (52%), Gaps = 41/384 (10%)
Query: 1 MPQRNVASWNAMLCGFVKDG-------------------DLSSARGVFDAMPEKNVVSFT 41
M + V+SWNA++ G V++G DL + + A +S
Sbjct: 462 MESKMVSSWNALIGGHVQNGFPRKALDLYLLMRGSGLEPDLFTIASLLSACARLKSLSCG 521
Query: 42 TMIDG--------------------YAKAGDMAAARFLFEQATEKDVVAWSALISGYVQN 81
I G Y + G + A+ F+ EK++V W+ +I+G+ QN
Sbjct: 522 KEIHGSMLRNGFELDEFICISLVSLYVQCGKILLAKLFFDNMEEKNLVCWNTMINGFSQN 581
Query: 82 GQPNQALKVFLEMESKNVKPDEFILVSLMSATSQLGHLELAQWVDSYVSKSSIDLQQDHV 141
P AL +F +M S + PDE ++ + A SQ+ L L + + + KS + + V
Sbjct: 582 EFPFDALDMFHQMLSSKIWPDEISIIGALGACSQVSALRLGKELHCFAVKSHLT-EHSFV 640
Query: 142 IAALLDMNAKCGNMDRALKLFKEMPKRDLVSYCSMIQGLSIHGCGEDAVRLFNSMLMEGL 201
+L+DM AKCG M+++ +F + + V++ +I G IHG G A+ LF SM G
Sbjct: 641 TCSLIDMYAKCGCMEQSQNIFDRVHLKGEVTWNVLITGYGIHGHGRKAIELFKSMQNAGF 700
Query: 202 VPDEVAFTIILTACSHSGLVDEGWNYFQSMKQKYGISPSPDHFACMVDLLSRSGHLGDAY 261
PD V F +LTAC+H+GLV EG Y M+ +GI P +H+AC+VD+L R+G L +A
Sbjct: 701 RPDSVTFIALLTACNHAGLVAEGLEYLGQMQSLFGIKPKLEHYACVVDMLGRAGRLNEAL 760
Query: 262 ELMKSM-HEPHAGAWGALLGACKLHGDSDLGEIVANQLFELEPQNAANYILLSNIYAAAE 320
EL+ + +P + W +LL +C+ + D D+GE VAN+L EL P A NY+L+SN YA
Sbjct: 761 ELVNELPDKPDSRIWSSLLSSCRNYRDLDIGEKVANKLLELGPDKAENYVLISNFYARLG 820
Query: 321 RWIDVSLVRSRMRERSVQKIPGCS 344
+W +V +R RM+E +QK GCS
Sbjct: 821 KWDEVRKMRQRMKEIGLQKDAGCS 844
Score = 114 bits (284), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 83/328 (25%), Positives = 147/328 (44%), Gaps = 49/328 (14%)
Query: 3 QRNVASWNAMLCGFVKDGDLSSARGVFD-----AMPEKNVVSFTTMID------------ 45
++NV SWN+M+ G+ KD D RG F+ M +K V+ T+++
Sbjct: 361 EKNVISWNSMIGGYSKDRDF---RGAFELLRKMQMEDKVKVNEVTLLNVLPVCEEEIQFL 417
Query: 46 ---------------------------GYAKAGDMAAARFLFEQATEKDVVAWSALISGY 78
GYAK G + A +F K V +W+ALI G+
Sbjct: 418 KLKEIHGYALRHGFIQSDELVANAFVAGYAKCGSLHYAEGVFCGMESKMVSSWNALIGGH 477
Query: 79 VQNGQPNQALKVFLEMESKNVKPDEFILVSLMSATSQLGHLELAQWVDSYVSKSSIDLQQ 138
VQNG P +AL ++L M ++PD F + SL+SA ++L L + + + ++ +L +
Sbjct: 478 VQNGFPRKALDLYLLMRGSGLEPDLFTIASLLSACARLKSLSCGKEIHGSMLRNGFELDE 537
Query: 139 DHVIAALLDMNAKCGNMDRALKLFKEMPKRDLVSYCSMIQGLSIHGCGEDAVRLFNSMLM 198
+ +L+ + +CG + A F M +++LV + +MI G S + DA+ +F+ ML
Sbjct: 538 -FICISLVSLYVQCGKILLAKLFFDNMEEKNLVCWNTMINGFSQNEFPFDALDMFHQMLS 596
Query: 199 EGLVPDEVAFTIILTACSHSGLVDEGWNYFQSMKQKYGISPSPDHFACMVDLLSRSGHLG 258
+ PDE++ L ACS + G K ++ ++D+ ++ G +
Sbjct: 597 SKIWPDEISIIGALGACSQVSALRLG-KELHCFAVKSHLTEHSFVTCSLIDMYAKCGCME 655
Query: 259 DAYELMKSMHEPHAGAWGALLGACKLHG 286
+ + +H W L+ +HG
Sbjct: 656 QSQNIFDRVHLKGEVTWNVLITGYGIHG 683
Score = 102 bits (253), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 84/318 (26%), Positives = 153/318 (48%), Gaps = 12/318 (3%)
Query: 13 LCGFVKDGDLSSARGVFDAMP---EKNVVSFTTMIDGYAKAGDMAAARFLFEQATEKDVV 69
LCG K+ ++ F + + +VV T ++ Y+ + +F + K++
Sbjct: 102 LCGEYKNIEIGRKIHNFISTSPHFQNDVVLITRLVTMYSICDSPYDSCLVFNASRRKNLF 161
Query: 70 AWSALISGYVQNGQPNQALKVFLEMES-KNVKPDEFILVSLMSATSQLGHLELAQWVDSY 128
W+AL+SGY++N A+ VF+EM S PD F L ++ A + + L + V +
Sbjct: 162 LWNALLSGYLRNSLFRDAVFVFVEMISLTEFVPDNFTLPCVIKACVGVYDVRLGEAVHGF 221
Query: 129 VSKSSIDLQQDHVIAALLDMNAKCGNMDRALKLFKEMPKRDLVSYCSMIQGLSIHGCGED 188
K+ + L V AL+ M K G ++ A+K+F +MP+R+LVS+ S++ +G E+
Sbjct: 222 ALKTKV-LSDVFVGNALIAMYGKFGFVESAVKVFDKMPQRNLVSWNSVMYACLENGVFEE 280
Query: 189 AVRLFNSMLM--EGLVPDEVAFTIILTACSHSGLVDEGWNYFQSMKQKYGISPSPDHFAC 246
+ LF +L EGL+PD ++ C+ G V G F + K G+ +
Sbjct: 281 SYGLFKGLLNGDEGLMPDVATMVTVIPLCARQGEVRLGM-VFHGLALKLGLCGELKVNSS 339
Query: 247 MVDLLSRSGHLGDAYELMKSMHEPHAGAWGALLGACKLHGDSDL-GEIVANQLFELEPQN 305
++D+ S+ G+L +A L + +E + +W +++G D D G + ++E +
Sbjct: 340 LLDMYSKCGYLCEARVLFDT-NEKNVISWNSMIGG--YSKDRDFRGAFELLRKMQMEDKV 396
Query: 306 AANYILLSNIYAAAERWI 323
N + L N+ E I
Sbjct: 397 KVNEVTLLNVLPVCEEEI 414
Score = 79.0 bits (193), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 76/328 (23%), Positives = 141/328 (42%), Gaps = 54/328 (16%)
Query: 1 MPQRNVASWNAMLCGFVKDGDLSSARGVFDA--------MPEKNVVSFTTMI-------- 44
MPQRN+ SWN+++ +++G + G+F MP+ V + T+I
Sbjct: 257 MPQRNLVSWNSVMYACLENGVFEESYGLFKGLLNGDEGLMPD--VATMVTVIPLCARQGE 314
Query: 45 ---------------------------DGYAKAGDMAAARFLFEQATEKDVVAWSALISG 77
D Y+K G + AR LF+ EK+V++W+++I G
Sbjct: 315 VRLGMVFHGLALKLGLCGELKVNSSLLDMYSKCGYLCEARVLFD-TNEKNVISWNSMIGG 373
Query: 78 YVQNGQPNQALKVFLEMESKN-VKPDEFILVSLMSATSQLGHLELAQWVDSYVSKSSIDL 136
Y ++ A ++ +M+ ++ VK +E L++++ + + + Y + +
Sbjct: 374 YSKDRDFRGAFELLRKMQMEDKVKVNEVTLLNVLPVCEEEIQFLKLKEIHGYALRHGF-I 432
Query: 137 QQDHVIA-ALLDMNAKCGNMDRALKLFKEMPKRDLVSYCSMIQGLSIHGCGEDAVRLFNS 195
Q D ++A A + AKCG++ A +F M + + S+ ++I G +G A+ L+
Sbjct: 433 QSDELVANAFVAGYAKCGSLHYAEGVFCGMESKMVSSWNALIGGHVQNGFPRKALDLYLL 492
Query: 196 MLMEGLVPDEVAFTIILTACSHSGLVDEGWNYFQSMKQKYGISPSPDHFAC--MVDLLSR 253
M GL PD +L+AC+ + G SM + D F C +V L +
Sbjct: 493 MRGSGLEPDLFTIASLLSACARLKSLSCGKEIHGSMLRN---GFELDEFICISLVSLYVQ 549
Query: 254 SGHLGDAYELMKSMHEPHAGAWGALLGA 281
G + A +M E + W ++
Sbjct: 550 CGKILLAKLFFDNMEEKNLVCWNTMING 577
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 67/282 (23%), Positives = 117/282 (41%), Gaps = 50/282 (17%)
Query: 10 NAMLCGFVKDGDLSSARGVFDAMPEKNVVSFTTMIDGYAKAGDMAAARFLFEQATEKDVV 69
NA++ + K G + SA VFD MP++N+VS
Sbjct: 235 NALIAMYGKFGFVESAVKVFDKMPQRNLVS------------------------------ 264
Query: 70 AWSALISGYVQNGQPNQALKVF--LEMESKNVKPDEFILVSLMSATSQLGHLELAQWVDS 127
W++++ ++NG ++ +F L + + PD +V+++ ++ G + L
Sbjct: 265 -WNSVMYACLENGVFEESYGLFKGLLNGDEGLMPDVATMVTVIPLCARQGEVRLGMVFHG 323
Query: 128 YVSKSSIDLQQDHVIAALLDMNAKCGNMDRALKLFKEMPKRDLVSYCSMIQGLSIHGCGE 187
K + + V ++LLDM +KCG + A LF + +++++S+ SMI G S
Sbjct: 324 LALKLGL-CGELKVNSSLLDMYSKCGYLCEARVLF-DTNEKNVISWNSMIGGYSKDRDFR 381
Query: 188 DAVRLFNSMLMEGLVP-DEVAFTIILTACSHSGLVDEGWNYFQSMKQ------KYGISPS 240
A L M ME V +EV +L C E F +K+ ++G S
Sbjct: 382 GAFELLRKMQMEDKVKVNEVTLLNVLPVC-------EEEIQFLKLKEIHGYALRHGFIQS 434
Query: 241 PDHFA-CMVDLLSRSGHLGDAYELMKSMHEPHAGAWGALLGA 281
+ A V ++ G L A + M +W AL+G
Sbjct: 435 DELVANAFVAGYAKCGSLHYAEGVFCGMESKMVSSWNALIGG 476
>Medtr0011s0300.1 | PPR containing plant-like protein | HC |
scaffold0011:236494-238095 | 20130731
Length = 533
Score = 236 bits (603), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 119/329 (36%), Positives = 200/329 (60%), Gaps = 4/329 (1%)
Query: 20 GDLSSARGVFDAMPEKNVVSFTTMIDGYAKAGDMAAARFLFEQATEKDVVAWSALISGYV 79
G+L AR +FD K+VV +T MIDGY K GD+ +AR +F++ E++VV+WSA+++ Y
Sbjct: 164 GELRKARVLFDQTGRKDVVLWTAMIDGYGKIGDVESAREMFDEMPERNVVSWSAMMAAYS 223
Query: 80 QNGQPNQALKVFLEMESKNVKPDEFILVSLMSATSQLGHLELAQWVDSYVSKSSIDLQQD 139
+ + + L +FLEM+S+ V+P++ +LV++++A + LG L WV SY +
Sbjct: 224 RVSEFREVLDLFLEMQSEGVRPNDSVLVTVLTACAHLGALTQGMWVHSYARRFDRVSSNP 283
Query: 140 HVIAALLDMNAKCGNMDRALKLFKEMPKRDLVSYCSMIQGLSIHGCGEDAVRLFNSMLME 199
+ AL+DM +KCG ++ AL +F + +D+ ++ +MI G++++G ++ LF M++
Sbjct: 284 ILATALVDMYSKCGCVESALSVFDGISDKDVGAWNAMISGVALNGDARKSLELFQQMIVC 343
Query: 200 GLVPDEVAFTIILTACSHSGLVDEGWNYFQSMKQKYGISPSPDHFACMVDLLSRSGHLGD 259
G P+E F +LTAC+H+ +V EG F+ M YG+ P +H+AC+VDLLSRSG + +
Sbjct: 344 GNKPNETTFVAVLTACTHARMVREGLRLFEEMSGTYGVEPCAEHYACVVDLLSRSGMVEE 403
Query: 260 A----YELMKSMHEPHAGAWGALLGACKLHGDSDLGEIVANQLFELEPQNAANYILLSNI 315
A E M A WGA+L AC+++ + ++G V +L ++ + ++L NI
Sbjct: 404 AERFIEEKMGGFAAGDANVWGAILNACRIYKNINVGNRVWKKLIDMGVADCGTHVLTYNI 463
Query: 316 YAAAERWIDVSLVRSRMRERSVQKIPGCS 344
Y A + + VRS + E ++K PGCS
Sbjct: 464 YREAGWDAEANRVRSMISEAGMKKKPGCS 492
>Medtr2g026210.1 | PPR containing plant-like protein | HC |
chr2:9478558-9480181 | 20130731
Length = 467
Score = 236 bits (602), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 123/303 (40%), Positives = 181/303 (59%), Gaps = 6/303 (1%)
Query: 47 YAKAGDMAAARFLFEQATEKDVVAWSALISGYVQNGQPNQALKVFLEMESKNVKPDEFIL 106
YAK+G + A+FLF EKD AW+A+I+GYVQ G L+ F EM +++PD++
Sbjct: 99 YAKSGCLETAQFLFNNLVEKDSFAWNAMIAGYVQKGLEEVGLETFYEMRQASLRPDQYTF 158
Query: 107 VSLMSATSQLGHLELAQWVDSYVSKSSIDLQQDHVI--AALLDMNAKCGNMDRALKLFKE 164
S+ A + L LE + + K I D+V+ +AL+DM KC + LF +
Sbjct: 159 ASVFRACATLALLEPGRQAHGVMLKCQIG---DNVVVNSALIDMYFKCSCICDGRLLFDK 215
Query: 165 MPKRDLVSYCSMIQGLSIHGCGEDAVRLFNSMLMEGLVPDEVAFTIILTACSHSGLVDEG 224
R+ +++ ++I G HG + + F+ M+ E P+ V F +L ACSH GL+DE
Sbjct: 216 CLSRNTITWTTLISGYGKHGQVVEVLDSFHRMISESFRPNYVTFLAVLVACSHVGLIDEA 275
Query: 225 WNYFQSMKQKYGISPSPDHFACMVDLLSRSGHLGDAYE-LMKSMHEPHAGAWGALLGACK 283
+ YFQSM + Y + P H+A MVDLL RSG L +AYE ++KS ++ H+ WGALLGACK
Sbjct: 276 YKYFQSMIRDYEMVPHAKHYAAMVDLLGRSGKLKEAYEFVLKSPYKEHSVIWGALLGACK 335
Query: 284 LHGDSDLGEIVANQLFELEPQNAANYILLSNIYAAAERWIDVSLVRSRMRERSVQKIPGC 343
+HGD DL +I + + FE E N Y++L+N YA++ W DV VR+ +RE V K PG
Sbjct: 336 IHGDLDLLKIASKKYFEFERVNTGKYVVLANAYASSGLWDDVEEVRASLRESGVTKEPGY 395
Query: 344 SKL 346
S++
Sbjct: 396 SRI 398
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 50/210 (23%), Positives = 104/210 (49%), Gaps = 5/210 (2%)
Query: 36 NVVSFTTMIDGYAKAGDMAAARFLFEQATEKDVVAWSALISGYVQNGQPNQALKVFLEME 95
NVV + +ID Y K + R LF++ ++ + W+ LISGY ++GQ + L F M
Sbjct: 189 NVVVNSALIDMYFKCSCICDGRLLFDKCLSRNTITWTTLISGYGKHGQVVEVLDSFHRMI 248
Query: 96 SKNVKPDEFILVSLMSATSQLGHLELA-QWVDSYVSKSSIDLQQDHVIAALLDMNAKCGN 154
S++ +P+ ++++ A S +G ++ A ++ S + + H AA++D+ + G
Sbjct: 249 SESFRPNYVTFLAVLVACSHVGLIDEAYKYFQSMIRDYEMVPHAKHY-AAMVDLLGRSGK 307
Query: 155 MDRALKLFKEMP-KRDLVSYCSMIQGLSIHGCGEDAVRLFNSMLMEGLVPDEVAFTIILT 213
+ A + + P K V + +++ IHG D +++ + E + + ++
Sbjct: 308 LKEAYEFVLKSPYKEHSVIWGALLGACKIHG-DLDLLKIASKKYFEFERVNTGKYVVLAN 366
Query: 214 ACSHSGLVDEGWNYFQSMKQKYGISPSPDH 243
A + SGL D+ S+++ G++ P +
Sbjct: 367 AYASSGLWDDVEEVRASLRES-GVTKEPGY 395
>Medtr2g035620.1 | PPR containing plant protein | HC |
chr2:15068017-15065354 | 20130731
Length = 887
Score = 236 bits (601), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 138/410 (33%), Positives = 223/410 (54%), Gaps = 68/410 (16%)
Query: 1 MPQRNVASWNAMLCGFVKDGDLSSARGVFDAMP--------------------------- 33
M +R +A WNAM+ G+V++ A +F M
Sbjct: 349 MFRRTIAVWNAMIAGYVRNEFDYEAIELFVEMVFELGLSPNSVTLSSVLPACVRCESFLD 408
Query: 34 -------------EKNVVSFTTMIDGYAKAGDMAAARFLFEQATEKDVVAWSALISGYVQ 80
EK+ ++D Y++ G + AR +F KD+V+W+ +I+GYV
Sbjct: 409 KEGIHSCVVKWGFEKDKYVQNALMDMYSRMGRIEIARSIFGSMNRKDIVSWNTMITGYVV 468
Query: 81 NGQPNQALKVFLEME----------------SKN--VKPDEFILVSLMSATSQLGHLELA 122
G+ + AL + +M+ +KN +KP+ L++++ + L L
Sbjct: 469 CGRHDDALNLLHDMQRGQAEHRINTFDDYEDNKNFPLKPNSVTLMTVLPGCAALAALGKG 528
Query: 123 QWVDSYVSKSSIDLQQDHVI-AALLDMNAKCGNMDRALKLFKEMPKRDLVSYCSMIQGLS 181
+ + +Y K L +D + +AL+DM AKCG ++ + +F++M R+++++ +I
Sbjct: 529 KEIHAYAVKQM--LSKDVAVGSALVDMYAKCGCLNLSRTVFEQMSVRNVITWNVLIMAYG 586
Query: 182 IHGCGEDAVRLFNSMLMEG-----LVPDEVAFTIILTACSHSGLVDEGWNYFQSMKQKYG 236
+HG GE+A++LF M+ EG + P+EV + I + SHSG+VDEG N F +MK K+G
Sbjct: 587 MHGKGEEALKLFRRMVEEGDNNREIRPNEVTYIAIFASLSHSGMVDEGLNLFYTMKAKHG 646
Query: 237 ISPSPDHFACMVDLLSRSGHLGDAYELMKSM--HEPHAGAWGALLGACKLHGDSDLGEIV 294
I P+ DH+AC+VDLL RSG + +AY L+K+M + AW +LLGACK+H + ++GEI
Sbjct: 647 IEPTSDHYACLVDLLGRSGQIEEAYNLIKTMPSNMKKVDAWSSLLGACKIHQNLEIGEIA 706
Query: 295 ANQLFELEPQNAANYILLSNIYAAAERWIDVSLVRSRMRERSVQKIPGCS 344
A LF L+P A+ Y+LLSNIY++A W VR +M+E+ V+K PGCS
Sbjct: 707 AKNLFVLDPNVASYYVLLSNIYSSAGLWDQAIDVRKKMKEKGVRKEPGCS 756
Score = 93.2 bits (230), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 71/258 (27%), Positives = 122/258 (47%), Gaps = 11/258 (4%)
Query: 39 SFTT--MIDGYAKAGDMAAARFLFEQATEKDVVAWSALISGYVQNGQPNQALKVFLEMES 96
+FT ++ YAK G + A+ LF+ +KD+V+W+ +IS QN + +AL M
Sbjct: 221 TFTNNALVTMYAKLGRVYEAKTLFDVFDDKDLVSWNTIISSLSQNDRFEEALLYLHVMLQ 280
Query: 97 KNVKPDEFILVSLMSATSQLGHLELAQWVDSYVSKSSIDLQQDHVIAALLDMNAKCGNMD 156
V+P+ L S++ A S L L + + ++V ++ ++ V AL+DM C +
Sbjct: 281 SGVRPNGVTLASVLPACSHLEMLGCGKEIHAFVLMNNDLIENSFVGCALVDMYCNCKQPE 340
Query: 157 RALKLFKEMPKRDLVSYCSMIQGLSIHGCGEDAVRLFNSMLME-GLVPDEVAFTIILTAC 215
+ +F M +R + + +MI G + +A+ LF M+ E GL P+ V + +L AC
Sbjct: 341 KGRLVFDGMFRRTIAVWNAMIAGYVRNEFDYEAIELFVEMVFELGLSPNSVTLSSVLPAC 400
Query: 216 --SHSGLVDEGWNYFQSMKQKYGISPSPDHFACMVDLLSRSGHLGDAYELMKSMHEPHAG 273
S L EG S K+G ++D+ SR G + A + SM+
Sbjct: 401 VRCESFLDKEG---IHSCVVKWGFEKDKYVQNALMDMYSRMGRIEIARSIFGSMNRKDIV 457
Query: 274 AWGALLGA---CKLHGDS 288
+W ++ C H D+
Sbjct: 458 SWNTMITGYVVCGRHDDA 475
Score = 89.0 bits (219), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 80/293 (27%), Positives = 134/293 (45%), Gaps = 9/293 (3%)
Query: 31 AMPEKNVVSFTTMIDGYAKAGDMAAARFLFEQATEKDVVAWSALISGYVQNGQPNQALKV 90
A+P SF M Y K GD+ AAR +F++ T +D V+W+++I+ + + A+ +
Sbjct: 117 ALPTAVPNSFVNM---YGKCGDIDAARRVFDEITNRDDVSWNSMINAACRFEEWELAVHL 173
Query: 91 FLEMESKNVKPDEFILVSLMSATSQL-GHLELAQWVDSYVSKSSIDLQQDHVIAALLDMN 149
F M +NV P F LVS+ A S L L L + V ++V ++ + AL+ M
Sbjct: 174 FRLMLLENVGPTSFTLVSVAHACSNLINGLLLGKQVHAFVLRNGD--WRTFTNNALVTMY 231
Query: 150 AKCGNMDRALKLFKEMPKRDLVSYCSMIQGLSIHGCGEDAVRLFNSMLMEGLVPDEVAFT 209
AK G + A LF +DLVS+ ++I LS + E+A+ + ML G+ P+ V
Sbjct: 232 AKLGRVYEAKTLFDVFDDKDLVSWNTIISSLSQNDRFEEALLYLHVMLQSGVRPNGVTLA 291
Query: 210 IILTACSHSGLVDEGWNYFQSMKQKYGISPSPDHFACMVDLLSRSGHLGDAYELMKSMHE 269
+L ACSH ++ G + + + +VD+ + M
Sbjct: 292 SVLPACSHLEMLGCGKEIHAFVLMNNDLIENSFVGCALVDMYCNCKQPEKGRLVFDGMFR 351
Query: 270 PHAGAWGALL-GACKLHGDSDLGEIVANQLFELEPQNAANYILLSNIYAAAER 321
W A++ G + D + E+ +FEL + N + LS++ A R
Sbjct: 352 RTIAVWNAMIAGYVRNEFDYEAIELFVEMVFELGL--SPNSVTLSSVLPACVR 402
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 42/133 (31%), Positives = 68/133 (51%), Gaps = 1/133 (0%)
Query: 85 NQALKVFLEMESKNVKPDEFILVSLMSATSQLGHLELAQWVDSYVSKSSIDLQQDHVIAA 144
+QA+ + M + V PD F +++ AT+ + L L + + ++V K L V +
Sbjct: 67 HQAISTYTNMVTAGVPPDNFAFPAVLKATAGIQDLNLGKQLHAHVFKFGQALPTA-VPNS 125
Query: 145 LLDMNAKCGNMDRALKLFKEMPKRDLVSYCSMIQGLSIHGCGEDAVRLFNSMLMEGLVPD 204
++M KCG++D A ++F E+ RD VS+ SMI E AV LF ML+E + P
Sbjct: 126 FVNMYGKCGDIDAARRVFDEITNRDDVSWNSMINAACRFEEWELAVHLFRLMLLENVGPT 185
Query: 205 EVAFTIILTACSH 217
+ ACS+
Sbjct: 186 SFTLVSVAHACSN 198
>Medtr4g085110.1 | pentatricopeptide (PPR) repeat protein | HC |
chr4:33294066-33291364 | 20130731
Length = 814
Score = 235 bits (600), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 132/385 (34%), Positives = 210/385 (54%), Gaps = 42/385 (10%)
Query: 1 MPQRNVASWNAMLCGFVKDGDLSSARGVFDAMP--------------------------- 33
M R++ SWNAM+ G V++G + + +F +
Sbjct: 300 MCSRSLISWNAMISGCVQNGMVPESFSLFHKLVQSGDGFDSGTLVSLIRGCSQTSDLENG 359
Query: 34 ------------EKNVVSFTTMIDGYAKAGDMAAARFLFEQATEKDVVAWSALISGYVQN 81
E N+V T ++D Y+K G + A +F +++V+ W+A++ G QN
Sbjct: 360 KVLHACIIRKGLESNLVLSTAIVDMYSKCGAIKQASDVFRTMEKRNVITWTAMLVGLSQN 419
Query: 82 GQPNQALKVFLEMESKNVKPDEFILVSLMSATSQLGHLELAQWVDSYVSKSSIDLQQDHV 141
G ALK+F M+ +NV + LVSL+ + LG L+ + V ++ + + +
Sbjct: 420 GYAEGALKLFCRMQEENVAANSVTLVSLVHCCAHLGSLKKGRSVHGHLIRHGYEFNAVN- 478
Query: 142 IAALLDMNAKCGNMDRALKLFKE-MPKRDLVSYCSMIQGLSIHGCGEDAVRLFNSMLMEG 200
++AL+DM AKCG + A KLF +D++ SMI G +HG G A+R+++ M+ E
Sbjct: 479 MSALIDMYAKCGKIHSAEKLFYNGFHLKDVILCNSMIMGYGMHGQGHQALRVYDRMIDER 538
Query: 201 LVPDEVAFTIILTACSHSGLVDEGWNYFQSMKQKYGISPSPDHFACMVDLLSRSGHLGDA 260
L P++ F +LTACSHSGLV+EG F M++ + I PS H+AC VDLLSR+G+L +A
Sbjct: 539 LKPNQTTFVSMLTACSHSGLVEEGRTLFHCMERVHNIKPSDKHYACFVDLLSRAGYLEEA 598
Query: 261 YELMKSMH-EPHAGAWGALLGACKLHGDSDLGEIVANQLFELEPQNAANYILLSNIYAAA 319
Y L+K + EP ALLG C++H + ++G +A++L L+ N Y++LSNIY+ A
Sbjct: 599 YALVKQIPVEPSIDVLEALLGGCRIHKNINMGIQIADRLISLDYLNTGIYVMLSNIYSEA 658
Query: 320 ERWIDVSLVRSRMRERSVQKIPGCS 344
RW V+ +R MR+R ++K P S
Sbjct: 659 RRWESVNYIRGLMRKRGLKKTPAFS 683
Score = 114 bits (284), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 73/304 (24%), Positives = 148/304 (48%), Gaps = 43/304 (14%)
Query: 1 MPQRNVASWNAMLCGFVKDGDLSSARGVFDAMPE-------------------------- 34
MP+R+V WN+++ G+V++G L +F M
Sbjct: 199 MPERDVVCWNSIIGGYVQEGLLKEVIQLFVEMISCGIRPSSVTMASILKACGESGHKKLG 258
Query: 35 -------------KNVVSFTTMIDGYAKAGDMAAARFLFEQATEKDVVAWSALISGYVQN 81
+V T+++D Y GD +A +F + + +++W+A+ISG VQN
Sbjct: 259 TCVHVFVLALGMGDDVFVLTSLVDMYCNVGDTESAFLVFNRMCSRSLISWNAMISGCVQN 318
Query: 82 GQPNQALKVFLEMESKNVKPDEFILVSLMSATSQLGHLELAQWVDSYVSKSSIDLQQDHV 141
G ++ +F ++ D LVSL+ SQ LE + + + + + L+ + V
Sbjct: 319 GMVPESFSLFHKLVQSGDGFDSGTLVSLIRGCSQTSDLENGKVLHACIIRKG--LESNLV 376
Query: 142 IA-ALLDMNAKCGNMDRALKLFKEMPKRDLVSYCSMIQGLSIHGCGEDAVRLFNSMLMEG 200
++ A++DM +KCG + +A +F+ M KR+++++ +M+ GLS +G E A++LF M E
Sbjct: 377 LSTAIVDMYSKCGAIKQASDVFRTMEKRNVITWTAMLVGLSQNGYAEGALKLFCRMQEEN 436
Query: 201 LVPDEVAFTIILTACSHSGLVDEGWNYFQSMKQKYGISPSPDHFACMVDLLSRSGHLGDA 260
+ + V ++ C+H G + +G + + ++G + + + ++D+ ++ G + A
Sbjct: 437 VAANSVTLVSLVHCCAHLGSLKKGRSVHGHL-IRHGYEFNAVNMSALIDMYAKCGKIHSA 495
Query: 261 YELM 264
+L
Sbjct: 496 EKLF 499
Score = 108 bits (271), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 64/240 (26%), Positives = 126/240 (52%), Gaps = 4/240 (1%)
Query: 41 TTMIDGYAKAGDMAAARFLFEQATEKDVVAWSALISGYVQNGQPNQALKVFLEMESKNVK 100
++MI+ K G++ AR +F+ E+DVV W+++I GYVQ G + +++F+EM S ++
Sbjct: 177 SSMINFLVKCGNLNDARMVFDGMPERDVVCWNSIIGGYVQEGLLKEVIQLFVEMISCGIR 236
Query: 101 PDEFILVSLMSATSQLGHLELAQWVDSYVSKSSIDLQQD-HVIAALLDMNAKCGNMDRAL 159
P + S++ A + GH +L V +V ++ + D V+ +L+DM G+ + A
Sbjct: 237 PSSVTMASILKACGESGHKKLGTCVHVFV--LALGMGDDVFVLTSLVDMYCNVGDTESAF 294
Query: 160 KLFKEMPKRDLVSYCSMIQGLSIHGCGEDAVRLFNSMLMEGLVPDEVAFTIILTACSHSG 219
+F M R L+S+ +MI G +G ++ LF+ ++ G D ++ CS +
Sbjct: 295 LVFNRMCSRSLISWNAMISGCVQNGMVPESFSLFHKLVQSGDGFDSGTLVSLIRGCSQTS 354
Query: 220 LVDEGWNYFQSMKQKYGISPSPDHFACMVDLLSRSGHLGDAYELMKSMHEPHAGAWGALL 279
++ G + +K G+ + +VD+ S+ G + A ++ ++M + + W A+L
Sbjct: 355 DLENGKVLHACIIRK-GLESNLVLSTAIVDMYSKCGAIKQASDVFRTMEKRNVITWTAML 413
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 58/246 (23%), Positives = 113/246 (45%), Gaps = 2/246 (0%)
Query: 41 TTMIDGYAKAGDMAAARFLFEQATEKDVVAWSALISGYVQNGQPNQALKVFLEMESKNVK 100
T +I Y+ G + A +F+Q ++ + +A++ G+++N + + K+F M ++++
Sbjct: 76 TKLIKIYSNLGFLNYAYKVFDQCPHRETILCNAMMGGFLKNMEYKEVPKLFKMMGLRDIE 135
Query: 101 PDEFILVSLMSATSQLGHLELAQWVDSYVSKSSIDLQQDHVIAALLDMNAKCGNMDRALK 160
+ + V + A + L E+ + + L HV +++++ KCGN++ A
Sbjct: 136 LNSYTCVFGLKACTVLLDDEVGMELVRMAVRKGFHLHP-HVGSSMINFLVKCGNLNDARM 194
Query: 161 LFKEMPKRDLVSYCSMIQGLSIHGCGEDAVRLFNSMLMEGLVPDEVAFTIILTACSHSGL 220
+F MP+RD+V + S+I G G ++ ++LF M+ G+ P V IL AC SG
Sbjct: 195 VFDGMPERDVVCWNSIIGGYVQEGLLKEVIQLFVEMISCGIRPSSVTMASILKACGESGH 254
Query: 221 VDEGWNYFQSMKQKYGISPSPDHFACMVDLLSRSGHLGDAYELMKSMHEPHAGAWGALLG 280
G G+ +VD+ G A+ + M +W A++
Sbjct: 255 KKLG-TCVHVFVLALGMGDDVFVLTSLVDMYCNVGDTESAFLVFNRMCSRSLISWNAMIS 313
Query: 281 ACKLHG 286
C +G
Sbjct: 314 GCVQNG 319
>Medtr1g007610.1 | pentatricopeptide (PPR) repeat protein | HC |
chr1:453448-455881 | 20130731
Length = 668
Score = 235 bits (600), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 123/313 (39%), Positives = 199/313 (63%), Gaps = 4/313 (1%)
Query: 34 EKNVVSFTTMIDGYAKAGDMAAARFLFEQATEKDVVAWSALISGYVQNGQPNQALKVFLE 93
++NV ++++D YA+ G++ +R +F++ K+ V+W+ALISG+ + G+ +AL +F++
Sbjct: 227 QENVFVGSSLVDMYARCGELRESRLVFDELESKNEVSWNALISGFARKGEGEEALGLFVK 286
Query: 94 MESKNVKPDEFILVSLMSATSQLGHLELAQWVDSYVSKSSIDLQQDHVIAALLDMNAKCG 153
M+ + EF +L+ ++S G LE +W+ +++ KS L +V LL M AK G
Sbjct: 287 MQREGFGATEFTYSALLCSSSTTGSLEQGKWLHAHMMKSGKKLV-GYVGNTLLHMYAKSG 345
Query: 154 NMDRALKLFKEMPKRDLVSYCSMIQGLSIHGCGEDAVRLFNSMLM-EGLVPDEVAFTIIL 212
N+ A K+F + K D+VS SM+ G + HG G++AV LF M++ + P+++ F +L
Sbjct: 346 NICDAKKVFDRLVKVDVVSCNSMLIGYAQHGLGKEAVELFEEMMLWVEIEPNDITFLSVL 405
Query: 213 TACSHSGLVDEGWNYFQSMKQKYGISPSPDHFACMVDLLSRSGHLGDAYELMKSMH-EPH 271
TACSH+GL+DEG YF+ MK KYG+ P H+ +VDL R+G L A ++ M EP+
Sbjct: 406 TACSHAGLLDEGLYYFELMK-KYGLEPKLSHYTTVVDLFGRAGLLDQAKSFIEEMPIEPN 464
Query: 272 AGAWGALLGACKLHGDSDLGEIVANQLFELEPQNAANYILLSNIYAAAERWIDVSLVRSR 331
A WGALLGA K+H ++++G A ++ EL+P + LLSNIYA+A +W DV+ VR
Sbjct: 465 ATIWGALLGASKMHKNTEMGAYAAQKVLELDPFYPGAHTLLSNIYASAGQWKDVAKVRKE 524
Query: 332 MRERSVQKIPGCS 344
M++ ++K P CS
Sbjct: 525 MKDSGLKKEPACS 537
Score = 103 bits (256), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 84/308 (27%), Positives = 156/308 (50%), Gaps = 19/308 (6%)
Query: 2 PQRNVASWNAML-----CGFVKDGDLSSARGVFDAMPEKNVVSFTTMIDGYAKAGDMAAA 56
P R + +N +L G +K G L + ++ ++V +++ YAK G + A
Sbjct: 89 PDRTI--YNKLLKRCTMLGKLKQGKLVHTH-LMNSKFRNDLVIKNSILFMYAKCGSLEIA 145
Query: 57 RFLFEQATEKDVVAWSALISGYVQNG---QPNQALKVFLEMESKNVKPDEFILVSLMSAT 113
R +F++ KDVV W+++I+GY Q+G AL +FLEM ++P+EF L SL+
Sbjct: 146 RQVFDEMCVKDVVTWTSMITGYSQDGYASSATTALVLFLEMVRDGLRPNEFALSSLVKCC 205
Query: 114 SQLGHLELAQWVDSYVSKSSIDLQQDHVIAALLDMNAKCGNMDRALKLFKEMPKRDLVSY 173
LG + + K + V ++L+DM A+CG + + +F E+ ++ VS+
Sbjct: 206 GFLGSCVDGKQIHGCCWKYGFQ-ENVFVGSSLVDMYARCGELRESRLVFDELESKNEVSW 264
Query: 174 CSMIQGLSIHGCGEDAVRLFNSMLMEGLVPDEVAFTIILTACSHSGLVDEG-WNYFQSMK 232
++I G + G GE+A+ LF M EG E ++ +L + S +G +++G W + MK
Sbjct: 265 NALISGFARKGEGEEALGLFVKMQREGFGATEFTYSALLCSSSTTGSLEQGKWLHAHMMK 324
Query: 233 QKYGISPSPDHFACMVDLLSRSGHLGDAYELMKSMHEPHAGAWGALLGACKLHGDSDLGE 292
+ + ++ + ++SG++ DA ++ + + + ++L HG LG+
Sbjct: 325 SGKKLVGYVGN--TLLHMYAKSGNICDAKKVFDRLVKVDVVSCNSMLIGYAQHG---LGK 379
Query: 293 IVANQLFE 300
A +LFE
Sbjct: 380 -EAVELFE 386
>Medtr1g039030.1 | pentatricopeptide (PPR) repeat protein | HC |
chr1:14398657-14402125 | 20130731
Length = 960
Score = 235 bits (600), Expect = 5e-62, Method: Compositional matrix adjust.
Identities = 117/336 (34%), Positives = 201/336 (59%), Gaps = 2/336 (0%)
Query: 10 NAMLCGFVKDGDLSSARGVFDAMPEKNVVSFTTMIDGYAKAGDMAAARFLFEQATEKDVV 69
NA++ + K GD A VF MP +N +S+T MI ++++GD+ AR F+ E+++V
Sbjct: 418 NAIITMYAKCGDTDKADLVFRLMPLRNTISWTAMITAFSRSGDIGKARGYFDMMPERNIV 477
Query: 70 AWSALISGYVQNGQPNQALKVFLEMESKNVKPDEFILVSLMSATSQLGHLELAQWVDSYV 129
W++++S YVQNG + LK+++ M S V+PD + + A + L ++L V ++
Sbjct: 478 TWNSMLSTYVQNGFSEEGLKLYVSMRSNGVQPDWITFTTSIRACADLAIVKLGMQVVTHA 537
Query: 130 SKSSIDLQQDHVIAALLDMNAKCGNMDRALKLFKEMPKRDLVSYCSMIQGLSIHGCGEDA 189
+K + L V +++ M ++CG + A F + +DL+S+ +M+ + +G G
Sbjct: 538 TKFGLSLNVS-VANSIVTMYSRCGLIKEAKNTFDSIDDKDLISWNAMLAAFAQNGLGIKV 596
Query: 190 VRLFNSMLMEGLVPDEVAFTIILTACSHSGLVDEGWNYFQSMKQKYGISPSPDHFACMVD 249
+ F ML P+ +++ +L+ CSH GLV EG +YF SM + +GISP+ +HF+CMVD
Sbjct: 597 IDTFEDMLKTECKPNHISYVSVLSGCSHMGLVAEGKHYFDSMTRVFGISPTNEHFSCMVD 656
Query: 250 LLSRSGHLGDAYELMKSM-HEPHAGAWGALLGACKLHGDSDLGEIVANQLFELEPQNAAN 308
LL R+G L A +L++ M +P+A W ALLG+C++H D L E A +L EL+ + +
Sbjct: 657 LLGRAGLLEQAKDLIEGMPFKPNATVWSALLGSCRVHHDLRLAETAAKKLMELDVEGSEG 716
Query: 309 YILLSNIYAAAERWIDVSLVRSRMRERSVQKIPGCS 344
Y+LLSN+Y+ + +V+ +R M+ + ++ GCS
Sbjct: 717 YVLLSNMYSESGELDNVADMRKLMKVKGIRTSRGCS 752
Score = 110 bits (276), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 89/314 (28%), Positives = 146/314 (46%), Gaps = 35/314 (11%)
Query: 10 NAMLCGFVKDGDLSSARGVFDAMPEKNVVSFTTMIDGYAKAGDMAAARFLFEQATEKDVV 69
N+++ +VK GD+ A VF + ++ + +MI GY++ A +F + E+D V
Sbjct: 185 NSVVGMYVKCGDVDLAETVFFDIERPSLFCWNSMIYGYSQMYGPYKALQIFNRMPERDEV 244
Query: 70 AWSALISGYVQNGQPNQALKVFLEMESKNVKPDEFILVSLMSATSQLGHLELAQWVDSYV 129
+W+ LIS + Q+G Q L +F+EM ++ P+ S++SA + L+ + + +
Sbjct: 245 SWNTLISIFSQHGFGVQCLAMFVEMCNQGFSPNFMTYGSVLSACASTSDLKWGAHLHARI 304
Query: 130 SK--SSIDLQQDHVIAALLDMNAKCGNMDRALKLFKEMPKRDLVSYCSMIQGLSIHGCGE 187
+ S+DL + L+DM AKCG +D A ++FK + + D +S+ S+I G+ G GE
Sbjct: 305 LRMEHSLDLVFGN---GLIDMYAKCGCLDLAKRVFKSLREHDHISWNSLITGVVHFGLGE 361
Query: 188 DAVRLFNSMLMEGLVPDEVAFTIILTACS-----------HSGLVDEGW-------NYFQ 229
DA+ LFN M +V DE IL CS H + G N
Sbjct: 362 DALILFNQMRRSSVVLDEFILPTILGVCSGPDYASTGELLHGYTIKSGMGSSAPVGNAII 421
Query: 230 SMKQKYGISPSPD------------HFACMVDLLSRSGHLGDAYELMKSMHEPHAGAWGA 277
+M K G + D + M+ SRSG +G A M E + W +
Sbjct: 422 TMYAKCGDTDKADLVFRLMPLRNTISWTAMITAFSRSGDIGKARGYFDMMPERNIVTWNS 481
Query: 278 LLGACKLHGDSDLG 291
+L +G S+ G
Sbjct: 482 MLSTYVQNGFSEEG 495
Score = 95.1 bits (235), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 82/327 (25%), Positives = 146/327 (44%), Gaps = 54/327 (16%)
Query: 14 CGFVKDGDLSSARGVFDAMPEKNVVSFTTMIDGYAKAGDMAAARFLFEQ--ATEKDVVAW 71
CG D A VF +N+ ++ TMI + M+ A LF++ KD V+W
Sbjct: 56 CGLTHD-----AFQVFQETHHRNIFTWNTMIRALVSSSRMSDAEKLFDEMPVRVKDSVSW 110
Query: 72 SALISGYVQNGQPNQALKVFLEM------ESKNVKPDEFILVSLMSATSQLGHLELAQWV 125
+ +ISGY QNG +++ + F M KN P F S+M A LG LA +
Sbjct: 111 TTMISGYSQNGFHSRSFETFSLMIRDTNDGGKNYDP--FSFTSVMKACGSLGDSRLAIQL 168
Query: 126 DSYVSKSSIDLQQDHVIAALLDMNAKCGNMD----------------------------- 156
+ VSK ++ + +++ M KCG++D
Sbjct: 169 HALVSKLGFGMETC-IQNSVVGMYVKCGDVDLAETVFFDIERPSLFCWNSMIYGYSQMYG 227
Query: 157 --RALKLFKEMPKRDLVSYCSMIQGLSIHGCGEDAVRLFNSMLMEGLVPDEVAFTIILTA 214
+AL++F MP+RD VS+ ++I S HG G + +F M +G P+ + + +L+A
Sbjct: 228 PYKALQIFNRMPERDEVSWNTLISIFSQHGFGVQCLAMFVEMCNQGFSPNFMTYGSVLSA 287
Query: 215 CSHSGLVDEGWN---YFQSMKQKYGISPSPDHFACMVDLLSRSGHLGDAYELMKSMHEPH 271
C+ + D W + + ++ ++ + + ++D+ ++ G L A + KS+ E
Sbjct: 288 CASTS--DLKWGAHLHARILRMEHSLDLVFGN--GLIDMYAKCGCLDLAKRVFKSLREHD 343
Query: 272 AGAWGALLGACKLHGDSDLGEIVANQL 298
+W +L+ G + I+ NQ+
Sbjct: 344 HISWNSLITGVVHFGLGEDALILFNQM 370
>Medtr1g103840.1 | pentatricopeptide (PPR) repeat protein | HC |
chr1:46998568-47001126 | 20130731
Length = 782
Score = 234 bits (598), Expect = 7e-62, Method: Compositional matrix adjust.
Identities = 122/339 (35%), Positives = 202/339 (59%), Gaps = 5/339 (1%)
Query: 10 NAMLCGFVKDGDLSSARGVFD--AMPEKNVVSFTTMIDGYAKAGDMAAARFLFEQATEKD 67
NA++ + K G + AR + + NV++FT++++GY K GD+ AR +F+ +D
Sbjct: 314 NALISMYAKSGAVEVARTIVELRGTSNINVIAFTSLLNGYVKIGDVNPAREIFDSLKCRD 373
Query: 68 VVAWSALISGYVQNGQPNQALKVFLEMESKNVKPDEFILVSLMSATSQLGHLELAQWVDS 127
VVAW+A+I GY QN AL++F M S+ +P+ + L +++S S L L+ + + +
Sbjct: 374 VVAWTAMIVGYAQNSLLKDALELFRLMISEGPRPNSYTLAAVLSVFSSLASLDHGKQLHA 433
Query: 128 YVSKSSIDLQQDHVIAALLDMNAKCGNMDRALKLFKEM-PKRDLVSYCSMIQGLSIHGCG 186
+ ++ V AL+ M +K G + A K+F ++ +RD +++ SMI L+ HG G
Sbjct: 434 IAIRLK-EVSSVSVGNALITMYSKSGCIKDARKVFNQICTERDTLTWTSMIIALAQHGLG 492
Query: 187 EDAVRLFNSMLMEGLVPDEVAFTIILTACSHSGLVDEGWNYFQSMKQKYGISPSPDHFAC 246
+A+ LF ML L PD + + +L+AC+H GLV++G YF MK + I P+ H+AC
Sbjct: 493 NEAIELFEDMLKFNLKPDHITYVGVLSACTHVGLVEQGKRYFNLMKNVHHIEPTHSHYAC 552
Query: 247 MVDLLSRSGHLGDAYELMKSMH-EPHAGAWGALLGACKLHGDSDLGEIVANQLFELEPQN 305
M+DL R+G + +AY +K+M EP AWG+LL AC++H + DL ++ A +L ++P N
Sbjct: 553 MIDLFGRAGLIEEAYNFIKTMPIEPDGIAWGSLLSACRVHKNVDLAKVAAEKLLLIDPNN 612
Query: 306 AANYILLSNIYAAAERWIDVSLVRSRMRERSVQKIPGCS 344
+ Y L+N ++A W + + VR MR+R V+K G S
Sbjct: 613 SGAYSALANTHSACGEWEEAAKVRKLMRDREVKKEQGFS 651
Score = 108 bits (270), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 64/239 (26%), Positives = 111/239 (46%), Gaps = 31/239 (12%)
Query: 10 NAMLCGFVKDGDLSSARGVFDAMPEKNVVSFTTMIDGYAKAGDMAAARFLFEQATEKDVV 69
N +L + K + A +F MP++ S+ T++ YAK G++ AR LF+ E D V
Sbjct: 49 NNLLNFYSKTASFNDAHRLFSEMPQRTTFSWNTLLSSYAKGGNIETARRLFDDIPEPDSV 108
Query: 70 AWSALISGYVQNGQPNQALKVFLEMESKNVKPDEFILVSLMSATSQLGHLELAQWVDSYV 129
+W+ +I GY Q G+ N A+ F +M S + P +F +++++ G L++ + V S+V
Sbjct: 109 SWTTMIVGYNQMGRFNTAIHTFQQMISDGILPTQFTFTNVLASCVATGSLDIGKKVHSFV 168
Query: 130 SK------------------------------SSIDLQQDHVIAALLDMNAKCGNMDRAL 159
K + L+ ++ M+ + G D AL
Sbjct: 169 VKLGLSGVVPVANSLLNMYVKSGDSLRVKAVFDRMRLRDKSTWNIMISMHMQSGRFDVAL 228
Query: 160 KLFKEMPKRDLVSYCSMIQGLSIHGCGEDAVRLFNSMLM-EGLVPDEVAFTIILTACSH 217
LF +M RD++S+ S+I G G A+ F+ M L PD+ +L+AC++
Sbjct: 229 ALFDQMTDRDIISWNSIIAGYCHQGYDSKALETFSDMFRSSSLKPDKFTLGSVLSACAN 287
>Medtr8g027810.1 | pentatricopeptide (PPR) repeat protein | HC |
chr8:10160876-10157214 | 20130731
Length = 967
Score = 234 bits (598), Expect = 8e-62, Method: Compositional matrix adjust.
Identities = 121/348 (34%), Positives = 207/348 (59%), Gaps = 11/348 (3%)
Query: 3 QRNVASWNAMLCGFVKDGDLSSARGVFDAMPEKNV----VSFTTMIDGYAKAGDMAAARF 58
+NV +WN+++ G+ G A + + M E+ + V++ ++ GY+ G + A
Sbjct: 457 NKNVCAWNSLISGYSFKGQFGEAVKLLNQMVEEGITPDLVTWNGLVSGYSMQGRIDEALT 516
Query: 59 LFEQ----ATEKDVVAWSALISGYVQNGQPNQALKVFLEMESKNVKPDEFILVSLMSATS 114
+ + +VV+W+ALISG QN + ALK+F +M+++NVKP+ + SL+ A +
Sbjct: 517 IINRIKSSGITPNVVSWTALISGCSQNEKYMDALKIFSQMQAENVKPNSTTICSLLCACA 576
Query: 115 QLGHLELAQWVDSYVSKSSIDLQQDHVIAALLDMNAKCGNMDRALKLFKEMPKRDLVSYC 174
L+ + + + K + +V AL+DM ++ G + A +F ++ ++ L +
Sbjct: 577 GPSLLKKGEELHCFSMKLGF-VDDIYVATALIDMYSEAGKLKVAYNVFNKIQEKTLPCWN 635
Query: 175 SMIQGLSIHGCGEDAVRLFNSMLMEGLVPDEVAFTIILTACSHSGLVDEGWNYFQSMKQK 234
M+ G +IH GE+ + L++ M + PD + FT +L+AC +SGLVDEGW YF SM++
Sbjct: 636 CMMMGYAIHSHGEEVMILYDKMRERHIRPDAITFTALLSACKNSGLVDEGWKYFDSMQED 695
Query: 235 YGISPSPDHFACMVDLLSRSGHLGDAYELMKSMH-EPHAGAWGALLGACKLHGDSDLGEI 293
Y I P+ +H+ CMVDLL +SG L +A +++M +P A WGALL +CK+H + L EI
Sbjct: 696 YNIVPTIEHYCCMVDLLGKSGFLDEASHFIETMPIKPDASIWGALLASCKIHKNIKLAEI 755
Query: 294 VANQLFELEPQNAANYILLSNIYAAAERWIDVSLVRSRMRERSVQKIP 341
A +LF++EP N+ANY+L+ N+Y++ RW+ V ++ M ++ KIP
Sbjct: 756 AARKLFKMEPNNSANYVLMMNLYSSLNRWVAVERLKHSMTVLAM-KIP 802
Score = 110 bits (274), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 73/289 (25%), Positives = 142/289 (49%), Gaps = 13/289 (4%)
Query: 5 NVASWNAMLCGFVKDGDLSSARGVFDAMPE--KNVVSFTTMIDGYAKAGDMAAARFLFEQ 62
N N+++ + ++ AR VFD+M + +N+ S+ ++I YA G + A
Sbjct: 289 NTLVCNSIISMYSRNSRFKLARAVFDSMEDHSRNLSSWNSVIFSYAVDGCLNDALDTIRN 348
Query: 63 ATE-----KDVVAWSALISGYVQNGQPNQALKVFLEMESKNVKPDEFILVSLMSATSQLG 117
E D++ W++++SGY+ G L F + S KPD + S + A +LG
Sbjct: 349 GMECSGIKPDIITWNSILSGYLLRGSFEMVLTSFRSLHSLGFKPDSCSVTSALQAVIELG 408
Query: 118 HLELAQWVDSYVSKSSIDLQQDHVIAALLDMNAKCGNMDRALKLFKEMPKRDLVSYCSMI 177
+L + + Y+ +S+++ +V +L+DM K +++A + +++ ++ S+I
Sbjct: 409 FFKLGKEIHGYIMRSNLNYDV-YVCTSLVDMYVKNDCLEKAQAVLHRAKNKNVCAWNSLI 467
Query: 178 QGLSIHGCGEDAVRLFNSMLMEGLVPDEVAFTIILTACSHSGLVDEGWNYFQSMKQKYGI 237
G S G +AV+L N M+ EG+ PD V + +++ S G +DE +K GI
Sbjct: 468 SGYSFKGQFGEAVKLLNQMVEEGITPDLVTWNGLVSGYSMQGRIDEALTIINRIKSS-GI 526
Query: 238 SPSPDHFACMVDLLSRSGHLGDAYELMKSMH----EPHAGAWGALLGAC 282
+P+ + ++ S++ DA ++ M +P++ +LL AC
Sbjct: 527 TPNVVSWTALISGCSQNEKYMDALKIFSQMQAENVKPNSTTICSLLCAC 575
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 58/260 (22%), Positives = 110/260 (42%), Gaps = 33/260 (12%)
Query: 41 TTMIDGYAKAGDMAAARFLFEQATEKDVVAWSALISGYVQNGQPNQALKVFLEMESKNVK 100
T+++D Y K + A+ + +A K+V AW++LISGY GQ +A+K+ +M + +
Sbjct: 433 TSLVDMYVKNDCLEKAQAVLHRAKNKNVCAWNSLISGYSFKGQFGEAVKLLNQMVEEGIT 492
Query: 101 PDEFILVSLMSATSQLGHLELAQWVDSYVSKSSIDLQQDHVIAALLDMNAKCGNMDRALK 160
PD L+S S G ++ A + + + S I
Sbjct: 493 PDLVTWNGLVSGYSMQGRIDEALTIINRIKSSGI-------------------------- 526
Query: 161 LFKEMPKRDLVSYCSMIQGLSIHGCGEDAVRLFNSMLMEGLVPDEVAFTIILTACSHSGL 220
++VS+ ++I G S + DA+++F+ M E + P+ +L AC+ L
Sbjct: 527 ------TPNVVSWTALISGCSQNEKYMDALKIFSQMQAENVKPNSTTICSLLCACAGPSL 580
Query: 221 VDEGWNYFQSMKQKYGISPSPDHFACMVDLLSRSGHLGDAYELMKSMHEPHAGAWGALLG 280
+ +G K G ++D+ S +G L AY + + E W ++
Sbjct: 581 LKKG-EELHCFSMKLGFVDDIYVATALIDMYSEAGKLKVAYNVFNKIQEKTLPCWNCMMM 639
Query: 281 ACKLHGDSDLGEIVANQLFE 300
+H + I+ +++ E
Sbjct: 640 GYAIHSHGEEVMILYDKMRE 659
Score = 52.4 bits (124), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 50/248 (20%), Positives = 105/248 (42%), Gaps = 5/248 (2%)
Query: 42 TMIDGYAKAGDMAAARFLFEQATEKDVVAWSALISGYVQ-NGQPNQALKVFLEMESKNVK 100
TM+ Y + GD +A +F ++ + W++ + + G P + L VF EM SK V+
Sbjct: 92 TMMRNYLEFGDFLSAIKIFFVGFARNYLLWNSFLEEFESFGGDPFEILVVFNEMYSKGVE 151
Query: 101 PDEFILVSLMSATSQLGHLELAQWVDSYVSKSSIDLQQDHVIAALLDMNAKCGNMDRALK 160
D ++ L V + + K + H+ AL++ KC ++D+A +
Sbjct: 152 FDSKAFTFVLKICLALREFLFGLEVHACLIKKGFHVDV-HLSCALINFYGKCWSIDKANQ 210
Query: 161 LFKEMPKRDLVSYCSMIQGLSIHGCGEDAVRLFNSMLMEGLVPDEVAFTIILTACSHSGL 220
+F E P ++ + +++ ++A+ LF M + +L AC
Sbjct: 211 VFHETPYKEDFLWNTIVMANLRSERWKNALELFCDMQRDSAKATVGTTVKMLQACGKLKA 270
Query: 221 VDEGWNYFQSMKQKYGISPSPDHFACMVDLLSRSGHLGDAYELMKSM--HEPHAGAWGAL 278
++EG ++G+ + ++ + SR+ A + SM H + +W ++
Sbjct: 271 LNEG-KQLHGYALRFGLVSNTLVCNSIISMYSRNSRFKLARAVFDSMEDHSRNLSSWNSV 329
Query: 279 LGACKLHG 286
+ + + G
Sbjct: 330 IFSYAVDG 337
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/200 (21%), Positives = 89/200 (44%), Gaps = 5/200 (2%)
Query: 43 MIDGYAKAGDMAAARFLFEQATEKDVVAWSALISGYVQNGQPNQALKVFLEMESKNVKPD 102
+I+ Y K + A +F + K+ W+ ++ +++ + AL++F +M+ + K
Sbjct: 195 LINFYGKCWSIDKANQVFHETPYKEDFLWNTIVMANLRSERWKNALELFCDMQRDSAKAT 254
Query: 103 EFILVSLMSATSQLGHLELAQWVDSYVSKSSIDLQQDHVIAALLDMNAKCGNMDRALKLF 162
V ++ A +L L + + Y + + + V +++ M ++ A +F
Sbjct: 255 VGTTVKMLQACGKLKALNEGKQLHGYALRFGL-VSNTLVCNSIISMYSRNSRFKLARAVF 313
Query: 163 KEMP--KRDLVSYCSMIQGLSIHGCGEDAV-RLFNSMLMEGLVPDEVAFTIILTACSHSG 219
M R+L S+ S+I ++ GC DA+ + N M G+ PD + + IL+ G
Sbjct: 314 DSMEDHSRNLSSWNSVIFSYAVDGCLNDALDTIRNGMECSGIKPDIITWNSILSGYLLRG 373
Query: 220 LVDEGWNYFQSMKQKYGISP 239
+ F+S+ G P
Sbjct: 374 SFEMVLTSFRSL-HSLGFKP 392
>Medtr8g065730.2 | PPR containing plant-like protein | HC |
chr8:27332922-27335168 | 20130731
Length = 748
Score = 234 bits (597), Expect = 8e-62, Method: Compositional matrix adjust.
Identities = 125/385 (32%), Positives = 215/385 (55%), Gaps = 43/385 (11%)
Query: 1 MPQRNVASWNAMLCGFVKDGDLSSARGVFDAMP--------------------------- 33
M +R+ SW +M+ GF ++G A +F M
Sbjct: 235 MRERDSISWTSMITGFTQNGLDRDAIDIFREMKLENLQMDQYTFGSVLTACGGVMALQEG 294
Query: 34 ------------EKNVVSFTTMIDGYAKAGDMAAARFLFEQATEKDVVAWSALISGYVQN 81
+ N+ + +++ Y K ++ +A +F++ T K+VV+W+A++ GY QN
Sbjct: 295 KQVHAYIIRTDYKDNIFVASALVEMYCKCKNIKSAEAVFKKMTCKNVVSWTAMLVGYGQN 354
Query: 82 GQPNQALKVFLEMESKNVKPDEFILVSLMSATSQLGHLEL-AQWVDSYVSKSSIDLQQDH 140
G +A+K F +M+ ++PD+F L S++S+ + L LE AQ+ ++ I
Sbjct: 355 GYSEEAVKTFSDMQKYGIEPDDFTLGSVISSCANLASLEEGAQFHARALTSGLISFIT-- 412
Query: 141 VIAALLDMNAKCGNMDRALKLFKEMPKRDLVSYCSMIQGLSIHGCGEDAVRLFNSMLMEG 200
V AL+ + KCG+++ + +LF E+ +D V++ +++ G + G + + LF SML G
Sbjct: 413 VSNALVTLYGKCGSIEDSHRLFNEISFKDEVTWTALVSGYAQFGKANETIGLFESMLAHG 472
Query: 201 LVPDEVAFTIILTACSHSGLVDEGWNYFQSMKQKYGISPSPDHFACMVDLLSRSGHLGDA 260
L PD+V F +L+ACS +GLV++G F+SM ++GI P DH+ CM+DL SR+G + +A
Sbjct: 473 LKPDKVTFIGVLSACSRAGLVEKGNQIFESMINEHGIVPIQDHYTCMIDLFSRAGRIEEA 532
Query: 261 YELMKSM-HEPHAGAWGALLGACKLHGDSDLGEIVANQLFELEPQNAANYILLSNIYAAA 319
+ M P A +W LL +C+ +G+ D+G+ A L EL+P N A+Y+LLS++YAA
Sbjct: 533 RNFINKMPFSPDAISWATLLSSCRFYGNMDIGKWAAEFLMELDPHNTASYVLLSSVYAAK 592
Query: 320 ERWIDVSLVRSRMRERSVQKIPGCS 344
+W +V+ +R MR++ ++K PGCS
Sbjct: 593 GKWEEVARLRKDMRDKGLRKEPGCS 617
Score = 139 bits (351), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 78/275 (28%), Positives = 153/275 (55%), Gaps = 4/275 (1%)
Query: 16 FVKDGDLSSARGVFDAMPEKNVVSFTTMIDGYAKAGDMAAARFLFEQATEKDVVAWSALI 75
+ K G +S AR VFD +PEKNVV + T+I G + G + ++ LF + E+D ++W+++I
Sbjct: 188 YSKMGMISCARKVFDELPEKNVVMYNTLIMGLMRCGRVEDSKRLFFEMRERDSISWTSMI 247
Query: 76 SGYVQNGQPNQALKVFLEMESKNVKPDEFILVSLMSATSQLGHLELAQWVDSYVSKSSID 135
+G+ QNG A+ +F EM+ +N++ D++ S+++A + L+ + V +Y+ ++ D
Sbjct: 248 TGFTQNGLDRDAIDIFREMKLENLQMDQYTFGSVLTACGGVMALQEGKQVHAYIIRT--D 305
Query: 136 LQQDHVIA-ALLDMNAKCGNMDRALKLFKEMPKRDLVSYCSMIQGLSIHGCGEDAVRLFN 194
+ + +A AL++M KC N+ A +FK+M +++VS+ +M+ G +G E+AV+ F+
Sbjct: 306 YKDNIFVASALVEMYCKCKNIKSAEAVFKKMTCKNVVSWTAMLVGYGQNGYSEEAVKTFS 365
Query: 195 SMLMEGLVPDEVAFTIILTACSHSGLVDEGWNYFQSMKQKYGISPSPDHFACMVDLLSRS 254
M G+ PD+ ++++C++ ++EG F + G+ +V L +
Sbjct: 366 DMQKYGIEPDDFTLGSVISSCANLASLEEGAQ-FHARALTSGLISFITVSNALVTLYGKC 424
Query: 255 GHLGDAYELMKSMHEPHAGAWGALLGACKLHGDSD 289
G + D++ L + W AL+ G ++
Sbjct: 425 GSIEDSHRLFNEISFKDEVTWTALVSGYAQFGKAN 459
Score = 106 bits (265), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 79/318 (24%), Positives = 143/318 (44%), Gaps = 47/318 (14%)
Query: 1 MPQRNVASWNAMLCGFVKDGDLSSARGVFDAMPEKNVVSFTTMIDGYAKAGDMAAARFLF 60
+P N ++ + K G + A VFD MP N+ S+ T++ Y+K G ++ +LF
Sbjct: 39 LPYPETFLLNNLISSYAKLGSIPYASKVFDQMPHPNLYSWNTILSAYSKLGRVSEMEYLF 98
Query: 61 EQATEKDVVAWSALISGYVQNGQPNQALKVFLEM--ESKNVKPDEFILVSLMSATSQLGH 118
+ +D V+W++LISGY G Q++K + M ++ + +L+ S+ G
Sbjct: 99 DAMPRRDGVSWNSLISGYAGCGLIYQSVKAYNLMLKNDGSINLNRITFSTLLILASKRGC 158
Query: 119 LELAQWVDSYVSKSSIDLQQDHVIAALLDMNAK--------------------------- 151
++L + + +V K + V + L+DM +K
Sbjct: 159 VKLGRQIHGHVVKFGF-MSYVFVGSPLVDMYSKMGMISCARKVFDELPEKNVVMYNTLIM 217
Query: 152 ----CGNMDRALKLFKEMPKRDLVSYCSMIQGLSIHGCGEDAVRLFNSMLMEGLVPDEVA 207
CG ++ + +LF EM +RD +S+ SMI G + +G DA+ +F M +E L D+
Sbjct: 218 GLMRCGRVEDSKRLFFEMRERDSISWTSMITGFTQNGLDRDAIDIFREMKLENLQMDQYT 277
Query: 208 FTIILTACSHSGLVDEGWNYFQSMKQKYGISPSPDH------FACMVDLLSRSGHLGDAY 261
F +LTAC + EG KQ + D+ + +V++ + ++ A
Sbjct: 278 FGSVLTACGGVMALQEG-------KQVHAYIIRTDYKDNIFVASALVEMYCKCKNIKSAE 330
Query: 262 ELMKSMHEPHAGAWGALL 279
+ K M + +W A+L
Sbjct: 331 AVFKKMTCKNVVSWTAML 348
>Medtr8g065730.1 | PPR containing plant-like protein | HC |
chr8:27332922-27335168 | 20130731
Length = 748
Score = 234 bits (597), Expect = 8e-62, Method: Compositional matrix adjust.
Identities = 125/385 (32%), Positives = 215/385 (55%), Gaps = 43/385 (11%)
Query: 1 MPQRNVASWNAMLCGFVKDGDLSSARGVFDAMP--------------------------- 33
M +R+ SW +M+ GF ++G A +F M
Sbjct: 235 MRERDSISWTSMITGFTQNGLDRDAIDIFREMKLENLQMDQYTFGSVLTACGGVMALQEG 294
Query: 34 ------------EKNVVSFTTMIDGYAKAGDMAAARFLFEQATEKDVVAWSALISGYVQN 81
+ N+ + +++ Y K ++ +A +F++ T K+VV+W+A++ GY QN
Sbjct: 295 KQVHAYIIRTDYKDNIFVASALVEMYCKCKNIKSAEAVFKKMTCKNVVSWTAMLVGYGQN 354
Query: 82 GQPNQALKVFLEMESKNVKPDEFILVSLMSATSQLGHLEL-AQWVDSYVSKSSIDLQQDH 140
G +A+K F +M+ ++PD+F L S++S+ + L LE AQ+ ++ I
Sbjct: 355 GYSEEAVKTFSDMQKYGIEPDDFTLGSVISSCANLASLEEGAQFHARALTSGLISFIT-- 412
Query: 141 VIAALLDMNAKCGNMDRALKLFKEMPKRDLVSYCSMIQGLSIHGCGEDAVRLFNSMLMEG 200
V AL+ + KCG+++ + +LF E+ +D V++ +++ G + G + + LF SML G
Sbjct: 413 VSNALVTLYGKCGSIEDSHRLFNEISFKDEVTWTALVSGYAQFGKANETIGLFESMLAHG 472
Query: 201 LVPDEVAFTIILTACSHSGLVDEGWNYFQSMKQKYGISPSPDHFACMVDLLSRSGHLGDA 260
L PD+V F +L+ACS +GLV++G F+SM ++GI P DH+ CM+DL SR+G + +A
Sbjct: 473 LKPDKVTFIGVLSACSRAGLVEKGNQIFESMINEHGIVPIQDHYTCMIDLFSRAGRIEEA 532
Query: 261 YELMKSM-HEPHAGAWGALLGACKLHGDSDLGEIVANQLFELEPQNAANYILLSNIYAAA 319
+ M P A +W LL +C+ +G+ D+G+ A L EL+P N A+Y+LLS++YAA
Sbjct: 533 RNFINKMPFSPDAISWATLLSSCRFYGNMDIGKWAAEFLMELDPHNTASYVLLSSVYAAK 592
Query: 320 ERWIDVSLVRSRMRERSVQKIPGCS 344
+W +V+ +R MR++ ++K PGCS
Sbjct: 593 GKWEEVARLRKDMRDKGLRKEPGCS 617
Score = 139 bits (351), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 78/275 (28%), Positives = 153/275 (55%), Gaps = 4/275 (1%)
Query: 16 FVKDGDLSSARGVFDAMPEKNVVSFTTMIDGYAKAGDMAAARFLFEQATEKDVVAWSALI 75
+ K G +S AR VFD +PEKNVV + T+I G + G + ++ LF + E+D ++W+++I
Sbjct: 188 YSKMGMISCARKVFDELPEKNVVMYNTLIMGLMRCGRVEDSKRLFFEMRERDSISWTSMI 247
Query: 76 SGYVQNGQPNQALKVFLEMESKNVKPDEFILVSLMSATSQLGHLELAQWVDSYVSKSSID 135
+G+ QNG A+ +F EM+ +N++ D++ S+++A + L+ + V +Y+ ++ D
Sbjct: 248 TGFTQNGLDRDAIDIFREMKLENLQMDQYTFGSVLTACGGVMALQEGKQVHAYIIRT--D 305
Query: 136 LQQDHVIA-ALLDMNAKCGNMDRALKLFKEMPKRDLVSYCSMIQGLSIHGCGEDAVRLFN 194
+ + +A AL++M KC N+ A +FK+M +++VS+ +M+ G +G E+AV+ F+
Sbjct: 306 YKDNIFVASALVEMYCKCKNIKSAEAVFKKMTCKNVVSWTAMLVGYGQNGYSEEAVKTFS 365
Query: 195 SMLMEGLVPDEVAFTIILTACSHSGLVDEGWNYFQSMKQKYGISPSPDHFACMVDLLSRS 254
M G+ PD+ ++++C++ ++EG F + G+ +V L +
Sbjct: 366 DMQKYGIEPDDFTLGSVISSCANLASLEEGAQ-FHARALTSGLISFITVSNALVTLYGKC 424
Query: 255 GHLGDAYELMKSMHEPHAGAWGALLGACKLHGDSD 289
G + D++ L + W AL+ G ++
Sbjct: 425 GSIEDSHRLFNEISFKDEVTWTALVSGYAQFGKAN 459
Score = 106 bits (265), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 79/318 (24%), Positives = 143/318 (44%), Gaps = 47/318 (14%)
Query: 1 MPQRNVASWNAMLCGFVKDGDLSSARGVFDAMPEKNVVSFTTMIDGYAKAGDMAAARFLF 60
+P N ++ + K G + A VFD MP N+ S+ T++ Y+K G ++ +LF
Sbjct: 39 LPYPETFLLNNLISSYAKLGSIPYASKVFDQMPHPNLYSWNTILSAYSKLGRVSEMEYLF 98
Query: 61 EQATEKDVVAWSALISGYVQNGQPNQALKVFLEM--ESKNVKPDEFILVSLMSATSQLGH 118
+ +D V+W++LISGY G Q++K + M ++ + +L+ S+ G
Sbjct: 99 DAMPRRDGVSWNSLISGYAGCGLIYQSVKAYNLMLKNDGSINLNRITFSTLLILASKRGC 158
Query: 119 LELAQWVDSYVSKSSIDLQQDHVIAALLDMNAK--------------------------- 151
++L + + +V K + V + L+DM +K
Sbjct: 159 VKLGRQIHGHVVKFGF-MSYVFVGSPLVDMYSKMGMISCARKVFDELPEKNVVMYNTLIM 217
Query: 152 ----CGNMDRALKLFKEMPKRDLVSYCSMIQGLSIHGCGEDAVRLFNSMLMEGLVPDEVA 207
CG ++ + +LF EM +RD +S+ SMI G + +G DA+ +F M +E L D+
Sbjct: 218 GLMRCGRVEDSKRLFFEMRERDSISWTSMITGFTQNGLDRDAIDIFREMKLENLQMDQYT 277
Query: 208 FTIILTACSHSGLVDEGWNYFQSMKQKYGISPSPDH------FACMVDLLSRSGHLGDAY 261
F +LTAC + EG KQ + D+ + +V++ + ++ A
Sbjct: 278 FGSVLTACGGVMALQEG-------KQVHAYIIRTDYKDNIFVASALVEMYCKCKNIKSAE 330
Query: 262 ELMKSMHEPHAGAWGALL 279
+ K M + +W A+L
Sbjct: 331 AVFKKMTCKNVVSWTAML 348
>Medtr4g094592.1 | pentatricopeptide (PPR) repeat protein | HC |
chr4:38323846-38321575 | 20130731
Length = 628
Score = 234 bits (597), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 134/391 (34%), Positives = 210/391 (53%), Gaps = 47/391 (12%)
Query: 1 MPQRNVASWNAMLCGFVKDGDLSSARGVFDAMPEKNVV---------------------- 38
+P R+V WN+M+ G+ + G A G+F M E VV
Sbjct: 194 LPVRDVVLWNSMVNGYAQIGCFEEALGMFRRMVENGVVPCRYTVTGVLSIYSVIGDFDNG 253
Query: 39 ----SFTT-------------MIDGYAKAGDMAAARFLFEQATEKDVVAWSALISGYVQN 81
F T +ID Y K + A +FE EKD+ +W+++IS + +
Sbjct: 254 QAVHGFLTKMGYHSSVVVLNALIDMYGKCKCASDALNVFEVMDEKDMFSWNSIISVHQRC 313
Query: 82 GQPNQALKVFLEMESKNVKPDEFILVSLMSATSQLGHLELAQWVDSY-----VSKSSIDL 136
G LK+F M V+PD + +++ A + L L + + Y + K +
Sbjct: 314 GDHYGTLKLFDRMLGNKVQPDLVTVTTVLPACTHLAALMHGREIHGYMIVNGLGKEGRNN 373
Query: 137 QQDHVIA--ALLDMNAKCGNMDRALKLFKEMPKRDLVSYCSMIQGLSIHGCGEDAVRLFN 194
D V+ AL+DM AKCG+M A +F M ++D+ S+ MI G +HG G++A+ F
Sbjct: 374 DFDDVLLNNALMDMYAKCGSMRDARMVFDNMTEKDVASWNIMITGYGMHGYGDEALDTFT 433
Query: 195 SMLMEGLVPDEVAFTIILTACSHSGLVDEGWNYFQSMKQKYGISPSPDHFACMVDLLSRS 254
M LVP+E++F +L+ACSH+G+V EG + M KYG+ PS +H+ C++D+L R+
Sbjct: 434 RMRQAQLVPNEISFVGLLSACSHAGMVKEGLEFLAEMDSKYGVPPSVEHYTCVIDMLCRA 493
Query: 255 GHLGDAYELMKSM-HEPHAGAWGALLGACKLHGDSDLGEIVANQLFELEPQNAANYILLS 313
G L +AY+LM +M + W ALL AC+++ D+DL EI A+++ ELEP + NY+L+S
Sbjct: 494 GKLVEAYDLMLTMPFKADPVGWRALLAACRIYKDTDLAEIAASKVIELEPGHCGNYVLMS 553
Query: 314 NIYAAAERWIDVSLVRSRMRERSVQKIPGCS 344
N+Y R+ VS +R MR+++V+K PGCS
Sbjct: 554 NVYGVVGRYEQVSELRHTMRQQNVKKRPGCS 584
Score = 101 bits (252), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 85/336 (25%), Positives = 147/336 (43%), Gaps = 54/336 (16%)
Query: 4 RNVASWNAMLCGFVKDGDLSSARGVFDAMPEKNVV-----SFTTMIDGYAKAGDM----- 53
+NV ++NA++ GFV +G + G++ M VV +F +I AGD+
Sbjct: 95 KNVFAYNAIIAGFVSNGLSQHSFGLYKQMRLLGVVIPDKFTFPCVIRACGDAGDVFEVKK 154
Query: 54 ------------------------------AAARFLFEQATEKDVVAWSALISGYVQNGQ 83
A +FE+ +DVV W+++++GY Q G
Sbjct: 155 IHGLLFKFGLELDVFVGSALVTTYLKFWLVVDAHEVFEELPVRDVVLWNSMVNGYAQIGC 214
Query: 84 PNQALKVFLEMESKNVKPDEFILVSLMSATSQLGHLELAQWVDSYVSKSSIDLQQDHVIA 143
+AL +F M V P + + ++S S +G + Q V +++K V+
Sbjct: 215 FEEALGMFRRMVENGVVPCRYTVTGVLSIYSVIGDFDNGQAVHGFLTKMGYH-SSVVVLN 273
Query: 144 ALLDMNAKCGNMDRALKLFKEMPKRDLVSYCSMIQGLSIHG-CGED--AVRLFNSMLMEG 200
AL+DM KC AL +F+ M ++D+ S+ S+I S+H CG+ ++LF+ ML
Sbjct: 274 ALIDMYGKCKCASDALNVFEVMDEKDMFSWNSII---SVHQRCGDHYGTLKLFDRMLGNK 330
Query: 201 LVPDEVAFTIILTACSHSGLVDEGWNYFQSM-KQKYGISPSPDHF------ACMVDLLSR 253
+ PD V T +L AC+H + G M G + F ++D+ ++
Sbjct: 331 VQPDLVTVTTVLPACTHLAALMHGREIHGYMIVNGLGKEGRNNDFDDVLLNNALMDMYAK 390
Query: 254 SGHLGDAYELMKSMHEPHAGAWGALLGACKLHGDSD 289
G + DA + +M E +W ++ +HG D
Sbjct: 391 CGSMRDARMVFDNMTEKDVASWNIMITGYGMHGYGD 426
Score = 82.4 bits (202), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 65/253 (25%), Positives = 122/253 (48%), Gaps = 5/253 (1%)
Query: 38 VSFTTMIDGYAKAGDMAAARFLFEQAT--EKDVVAWSALISGYVQNGQPNQALKVFLEME 95
++ T++I+ Y+K + A +F T +K+V A++A+I+G+V NG + ++ +M
Sbjct: 65 LAITSIINMYSKCTLINYALKVFNYPTHHDKNVFAYNAIIAGFVSNGLSQHSFGLYKQMR 124
Query: 96 SKNVK-PDEFILVSLMSATSQLGHLELAQWVDSYVSKSSIDLQQDHVIAALLDMNAKCGN 154
V PD+F ++ A G + + + + K ++L V +AL+ K
Sbjct: 125 LLGVVIPDKFTFPCVIRACGDAGDVFEVKKIHGLLFKFGLELDV-FVGSALVTTYLKFWL 183
Query: 155 MDRALKLFKEMPKRDLVSYCSMIQGLSIHGCGEDAVRLFNSMLMEGLVPDEVAFTIILTA 214
+ A ++F+E+P RD+V + SM+ G + GC E+A+ +F M+ G+VP T +L+
Sbjct: 184 VVDAHEVFEELPVRDVVLWNSMVNGYAQIGCFEEALGMFRRMVENGVVPCRYTVTGVLSI 243
Query: 215 CSHSGLVDEGWNYFQSMKQKYGISPSPDHFACMVDLLSRSGHLGDAYELMKSMHEPHAGA 274
S G D G K G S ++D+ + DA + + M E +
Sbjct: 244 YSVIGDFDNG-QAVHGFLTKMGYHSSVVVLNALIDMYGKCKCASDALNVFEVMDEKDMFS 302
Query: 275 WGALLGACKLHGD 287
W +++ + GD
Sbjct: 303 WNSIISVHQRCGD 315
>Medtr3g089880.1 | pentatricopeptide (PPR) repeat protein | HC |
chr3:40854327-40856914 | 20130731
Length = 616
Score = 234 bits (596), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 124/349 (35%), Positives = 207/349 (59%), Gaps = 12/349 (3%)
Query: 4 RNVASWNAMLCGFVKDGDLSSARGVFDAMPEKNVVSFTTMIDGYAKAGDMAAARFLFEQA 63
++V W M+ G+ K G++ AR VF+ MPE+N +++M+ GY K GD+ A +F +
Sbjct: 179 KDVVIWTVMVDGYAKKGEMEDAREVFELMPERNYFVWSSMVCGYCKKGDVMEAEAIFRRI 238
Query: 64 TEKDVVAWSALISGYVQNGQPNQALKVFLEMESKNVKPDEFILVSLMSATSQLGHLELAQ 123
+++ W+++I+GYVQNG +AL+ F EM +PDEF +VS++SA +QLG L+ +
Sbjct: 239 PVRNLEIWNSMIAGYVQNGCGEKALEAFGEMGVDGFEPDEFTVVSVLSACAQLGDLDAGK 298
Query: 124 WVDSYVSKSSIDLQQDHVIAALLDMNAKCGNMDRALKLFKEMPKRDLVSYCSMIQGLSIH 183
+ + I + Q V++ L+DM AKCG++ A +F+ +R++ + +MI G +++
Sbjct: 299 QMHHMIECKGIAVNQ-FVLSGLIDMYAKCGDLVNARLVFESCNERNVFCWNAMIAGFAVN 357
Query: 184 GCGEDAVRLFNSMLMEGLVPDEVAFTIILTACSHSGLVDEGWNYFQSMKQKYGISPSPDH 243
G + + + M + D V F +L+AC+H GL+ E M ++YGI H
Sbjct: 358 GQCNEVLEYLDRMQESNIRLDAVTFITVLSACAHGGLMSEALEVISKM-EEYGIEMGIRH 416
Query: 244 FACMVDLLSRSGHLGDAYELMKSM-HEPHAGAWGALLGACKLHGDSDLGEIVANQLFELE 302
+ CMVDLL R+G L +AYEL+K M +P+ GA++GAC +H D + E Q+ ++
Sbjct: 417 YGCMVDLLGRAGKLKEAYELIKRMPMKPNETVLGAMIGACWIHSDMKMAE----QVMKMI 472
Query: 303 PQNAA-----NYILLSNIYAAAERWIDVSLVRSRMRERSVQKIPGCSKL 346
++A + +LLSNIYAA+E+W ++RS M + +KIPG S +
Sbjct: 473 GADSAACVNSHNVLLSNIYAASEKWEKAEMIRSSMVDGGSEKIPGYSSI 521
Score = 127 bits (320), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 83/282 (29%), Positives = 146/282 (51%), Gaps = 12/282 (4%)
Query: 10 NAMLCGFVKDGDLSSARGVFDAMPEKNVVSFTTMIDGYAKAGDMAAARFLFEQATEKDVV 69
A++ + K G + AR VFD MPE+NVV++ MI GY + GD +A FE+ K V
Sbjct: 90 TAIVAAYAKCGVVCDARKVFDLMPERNVVTWNAMIGGYLRNGDAKSALLAFEEMPGKTRV 149
Query: 70 AWSALISGYVQNGQPNQALKVF--LEMESKNVKPDEFILVSLMSATSQLGHLELAQWVDS 127
+WS +I G+ +NG A K F + E K+V I ++ ++ G +E A+ V
Sbjct: 150 SWSQMIGGFARNGDTLTARKFFDKVPYELKDV----VIWTVMVDGYAKKGEMEDAREVFE 205
Query: 128 YVSKSSIDLQQDHVIAALLDMNAKCGNMDRALKLFKEMPKRDLVSYCSMIQGLSIHGCGE 187
+ + + V ++++ K G++ A +F+ +P R+L + SMI G +GCGE
Sbjct: 206 LMPE-----RNYFVWSSMVCGYCKKGDVMEAEAIFRRIPVRNLEIWNSMIAGYVQNGCGE 260
Query: 188 DAVRLFNSMLMEGLVPDEVAFTIILTACSHSGLVDEGWNYFQSMKQKYGISPSPDHFACM 247
A+ F M ++G PDE +L+AC+ G +D G M + GI+ + + +
Sbjct: 261 KALEAFGEMGVDGFEPDEFTVVSVLSACAQLGDLDAG-KQMHHMIECKGIAVNQFVLSGL 319
Query: 248 VDLLSRSGHLGDAYELMKSMHEPHAGAWGALLGACKLHGDSD 289
+D+ ++ G L +A + +S +E + W A++ ++G +
Sbjct: 320 IDMYAKCGDLVNARLVFESCNERNVFCWNAMIAGFAVNGQCN 361
>Medtr6g012850.1 | pentatricopeptide (PPR) repeat protein | HC |
chr6:3995998-3993764 | 20130731
Length = 637
Score = 233 bits (595), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 128/340 (37%), Positives = 212/340 (62%), Gaps = 5/340 (1%)
Query: 10 NAMLCGFVKDGDLSSARGVFDAMPEKNVVSFTTMIDGYAKAGDMAAARFLFEQATEKDVV 69
NA++ +VK G + AR +F+ + ++VVS++ ++G K + + R LF++ E++ V
Sbjct: 162 NALMNVYVKFGLVGEARKMFEGIEVRSVVSWSCFLEGLVKWESVESGRVLFDEMPERNEV 221
Query: 70 AWSALISGYVQNGQPNQALKVFLEMESKNVKPDEFI-LVSLMSATSQLGHLELAQWVDSY 128
AW+ +I GYV NG +A + EM F+ L S++SA SQ G + + +WV Y
Sbjct: 222 AWTVMIVGYVGNGFTKEAFLLLKEMVFGCGFRLSFVTLCSVLSACSQSGDVCVGRWVHCY 281
Query: 129 -VSKSSIDLQQDHVIAALLDMNAKCGNMDRALKLFKEMPKRDLVSYCSMIQGLSIHGCGE 187
V + +D V +L+DM AKCG ++ AL +F+ M KR++V++ +M+ GL++HG G+
Sbjct: 282 AVKEMGLDFGV-MVGTSLVDMYAKCGRINAALSVFRSMLKRNVVAWNAMLGGLAMHGMGK 340
Query: 188 DAVRLFNSMLMEGLVPDEVAFTIILTACSHSGLVDEGWNYFQSMKQKYGISPSPDHFACM 247
AV +F SM+ E + PD V F +L+ACSHSGLV++GW+YF ++ Y I P +H+ACM
Sbjct: 341 IAVDMFPSMV-EEVKPDGVTFMALLSACSHSGLVEKGWDYFHDLEPVYRIKPEIEHYACM 399
Query: 248 VDLLSRSGHLGDAYELMKSMH-EPHAGAWGALLGACKLHGDSDLGEIVANQLFELEPQNA 306
V LL R+G L +A ++K+M P+ G+L+G+C HG LGE + L E++P N
Sbjct: 400 VGLLGRAGRLEEAEIMVKNMRIPPNEVVLGSLIGSCYAHGRLQLGEKIMRDLLEMDPLNT 459
Query: 307 ANYILLSNIYAAAERWIDVSLVRSRMRERSVQKIPGCSKL 346
+I+LSN+YA + + + +R +++R ++K+PG S +
Sbjct: 460 EYHIVLSNMYALSGKVEKANSLRQVLKKRGIKKVPGMSSI 499
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 72/302 (23%), Positives = 136/302 (45%), Gaps = 56/302 (18%)
Query: 56 ARFLFEQ--ATEKDVVAWSALISGYVQNGQPNQALKVFLEMESKNVKPDEFILVSLMSAT 113
AR LF++ + KD V ++ALI ++ P ++LK+F++M ++ D ++V ++A
Sbjct: 76 ARKLFDEIPQSHKDSVDYTALI----RHCPPFESLKLFIQMRQFDLPLDGVVMVCALNAC 131
Query: 114 SQLGHLELAQWVDSYVSKSSIDLQQ-DHVIAALLDMNAKCGNMDRALKLFKEMPKRDLVS 172
++LG + +V + D V AL+++ K G + A K+F+ + R +VS
Sbjct: 132 ARLGGGDTKVGSQMHVGVVKFGFVKFDKVCNALMNVYVKFGLVGEARKMFEGIEVRSVVS 191
Query: 173 YCSMIQGLSIHGCGEDAVRLFNSMLMEGLVPDEVAFTI---------------------- 210
+ ++GL E LF+ M +EVA+T+
Sbjct: 192 WSCFLEGLVKWESVESGRVLFDEMPER----NEVAWTVMIVGYVGNGFTKEAFLLLKEMV 247
Query: 211 --------------ILTACSHSGLVDEG-WNYFQSMKQ---KYGISPSPDHFACMVDLLS 252
+L+ACS SG V G W + ++K+ +G+ +VD+ +
Sbjct: 248 FGCGFRLSFVTLCSVLSACSQSGDVCVGRWVHCYAVKEMGLDFGVMVGTS----LVDMYA 303
Query: 253 RSGHLGDAYELMKSMHEPHAGAWGALLGACKLHGDSDLG-EIVANQLFELEPQNAANYIL 311
+ G + A + +SM + + AW A+LG +HG + ++ + + E++P L
Sbjct: 304 KCGRINAALSVFRSMLKRNVVAWNAMLGGLAMHGMGKIAVDMFPSMVEEVKPDGVTFMAL 363
Query: 312 LS 313
LS
Sbjct: 364 LS 365
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 69/294 (23%), Positives = 125/294 (42%), Gaps = 51/294 (17%)
Query: 1 MPQRNVASWNAMLCGFV------------------------------------KDGDLSS 24
MP+RN +W M+ G+V + GD+
Sbjct: 215 MPERNEVAWTVMIVGYVGNGFTKEAFLLLKEMVFGCGFRLSFVTLCSVLSACSQSGDVCV 274
Query: 25 ARGVFDAMPEKNVVSF-----TTMIDGYAKAGDMAAARFLFEQATEKDVVAWSALISGYV 79
R V ++ + F T+++D YAK G + AA +F +++VVAW+A++ G
Sbjct: 275 GRWVHCYAVKEMGLDFGVMVGTSLVDMYAKCGRINAALSVFRSMLKRNVVAWNAMLGGLA 334
Query: 80 QNGQPNQALKVFLEMESKNVKPDEFILVSLMSATSQLGHLELA-QWVDSYVSKSSIDLQQ 138
+G A+ +F M + VKPD ++L+SA S G +E + I +
Sbjct: 335 MHGMGKIAVDMFPSM-VEEVKPDGVTFMALLSACSHSGLVEKGWDYFHDLEPVYRIKPEI 393
Query: 139 DHVIAALLDMNAKCGNMDRALKLFKEM--PKRDLVSYCSMIQGLSIHGCGEDAVRLFNSM 196
+H A ++ + + G ++ A + K M P ++V S+I HG + ++ +
Sbjct: 394 EH-YACMVGLLGRAGRLEEAEIMVKNMRIPPNEVV-LGSLIGSCYAHGRLQLGEKIMRDL 451
Query: 197 LMEGLVPDEVAFTIILT-ACSHSGLVDEGWNYFQSMKQKYGISPSPDHFACMVD 249
L + P + I+L+ + SG V++ N + + +K GI P + VD
Sbjct: 452 L--EMDPLNTEYHIVLSNMYALSGKVEKA-NSLRQVLKKRGIKKVPGMSSIYVD 502
>Medtr3g098280.1 | pentatricopeptide (PPR) repeat protein | HC |
chr3:44861451-44859606 | 20130731
Length = 554
Score = 233 bits (595), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 117/322 (36%), Positives = 198/322 (61%), Gaps = 6/322 (1%)
Query: 28 VFDAMPEKNVVSFTTMIDGYAKAGDMAAARFLFEQATEKDVVAWSALISGYVQNGQPNQA 87
+F + N+ +I+ Y G + A LF++ +D+V+WS LIS V+N P +A
Sbjct: 103 IFKLGFDTNIFVQNALINAYGSRGSLDVAVKLFDEMRRRDIVSWSTLISCLVKNNLPAEA 162
Query: 88 LKVF--LEMESKNVKP--DEFILVSLMSATSQLGHLELAQWVDSYVSKSSIDLQQDHVIA 143
L VF ++M ++++ D I++S++SA S LG +EL WV S++ + I + +
Sbjct: 163 LSVFQQMQMGHRDIRNWLDRAIMLSVISAVSSLGVIELGIWVHSFIVRMGIVMTVP-LGT 221
Query: 144 ALLDMNAKCGNMDRALKLFKEMPKRDLVSYCSMIQGLSIHGCGEDAVRLFNSMLMEGLVP 203
AL++M ++CG +DR++K+F EMP+R++V++ ++I GL++HG +A+++F M GL P
Sbjct: 222 ALINMYSRCGLIDRSVKVFDEMPERNVVTWTALINGLAVHGRSREALKVFYEMKESGLKP 281
Query: 204 DEVAFTIILTACSHSGLVDEGWNYFQSMKQKYGISPSPDHFACMVDLLSRSGHLGDAYEL 263
D F +L ACSH GLV++GW F+SM+ ++GI P +H+ CMVDLL R+G + +A++
Sbjct: 282 DGALFIGVLVACSHGGLVEDGWRVFESMRDEFGIKPMLEHYGCMVDLLGRAGLILEAFDF 341
Query: 264 MKSMH-EPHAGAWGALLGACKLHGDSDLGEIVANQLFELEPQNAANYILLSNIYAAAERW 322
++ M +P++ W LLGAC H L E ++ EL+P + +Y+LLSN Y W
Sbjct: 342 VEEMPLKPNSVIWRTLLGACVNHNHLGLAEKARERIIELDPYHDGDYVLLSNAYGRVGNW 401
Query: 323 IDVSLVRSRMRERSVQKIPGCS 344
+ +R+ M++ + K PG S
Sbjct: 402 GGKAGLRNSMKQNRIVKEPGLS 423
>Medtr3g037470.1 | TPR superfamily protein | HC |
chr3:13772234-13768538 | 20130731
Length = 424
Score = 233 bits (595), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 118/298 (39%), Positives = 186/298 (62%), Gaps = 8/298 (2%)
Query: 41 TTMIDGYAKAGDMAAARFLFEQATEKDVVAWSALISGYVQNGQPNQALKVFLEMESKNVK 100
T+++ YA G++ A +F++ EK+++ W++LIS YV+N + N+ L++F M NV+
Sbjct: 115 TSLLKVYAGGGNLFDAHQVFDEIPEKNIICWTSLISAYVENHKSNKGLELFRLMLMNNVE 174
Query: 101 PDEFILVSLMSATSQLGHLELAQWVDSYVSKS---SIDLQQDHVIAALLDMNAKCGNMDR 157
PD+ +L + +SA + G LE+ +W+ +V + IDL H+ AL++M AKCG++
Sbjct: 175 PDQIVLTTALSACADAGGLEMGEWIHDFVRRKQGMKIDL---HLNNALINMYAKCGDIGN 231
Query: 158 ALKLFKEMPKRDLVSYCSMIQGLSIHGCGEDAVRLFNSMLMEGLVPDEVAFTIILTACSH 217
A KLF +D+ ++ SMI G ++HG +A++LF+ M + P++V F +L ACSH
Sbjct: 232 ARKLFDNTRNKDVTTWTSMIVGHAVHGEAREALQLFSEMNFI-VSPNDVTFIGVLMACSH 290
Query: 218 SGLVDEGWNYFQSMKQKYGISPSPDHFACMVDLLSRSGHLGDAYELMKSMH-EPHAGAWG 276
+GLV+EG F+SM + YGI P HF CMVDL RSGHL +AY+ + M P+A W
Sbjct: 291 AGLVEEGKRNFRSMNEDYGIEPREPHFGCMVDLFCRSGHLREAYDFIMEMPVPPNAVMWR 350
Query: 277 ALLGACKLHGDSDLGEIVANQLFELEPQNAANYILLSNIYAAAERWIDVSLVRSRMRE 334
LLGAC LHG+ L V ++L L+P + + LSNIYA E W +VR+++++
Sbjct: 351 TLLGACSLHGNLKLATEVRDKLINLDPGYVGDSVALSNIYADKEMWDKKIIVRNQIKQ 408
>Medtr7g037430.1 | pentatricopeptide (PPR) repeat protein | LC |
chr7:13795126-13792268 | 20130731
Length = 952
Score = 233 bits (594), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 121/342 (35%), Positives = 198/342 (57%), Gaps = 10/342 (2%)
Query: 10 NAMLCGFVKDGDLSSARGVFDAMPEKNVVSFTTMIDGYAKAGDMAAARFLFEQATEKDV- 68
NA+L + K + A+ VFD +P + V S+ ++ Y + ++F Q +V
Sbjct: 483 NALLSLYAKCVCVREAQVVFDLIPHREVASWNGILTAYFTNKEYEKGLYMFSQMNRDEVK 542
Query: 69 ---VAWSALISGYVQNGQPNQALKVFLEMESKNVKPDEFILVSLMSATSQLGHLELAQWV 125
+ WS +I G V+N + +A+++F +M++ KPDE + S++ A S L + + +
Sbjct: 543 ADEITWSVVIGGCVKNSRIEEAMEIFRKMQTMGFKPDETTIYSILRACSLSECLRMGKEI 602
Query: 126 DSYVSK--SSIDLQQDHVIAALLDMNAKCGNMDRALKLFKEMPKRDLVSYCSMIQGLSIH 183
YV + DL + + AL+DM AKCG + + +F MP +D+ S+ +MI +H
Sbjct: 603 HCYVFRHWKDWDLARTN---ALVDMYAKCGGLSLSRNVFDMMPIKDVFSWNTMIFANGMH 659
Query: 184 GCGEDAVRLFNSMLMEGLVPDEVAFTIILTACSHSGLVDEGWNYFQSMKQKYGISPSPDH 243
G G++A+ LF ML+ + PD FT +L+ACSHS LV+EG F SM + + + P +H
Sbjct: 660 GNGKEALSLFEKMLLSMVKPDSATFTCVLSACSHSMLVEEGVQIFNSMSRDHLVEPEAEH 719
Query: 244 FACMVDLLSRSGHLGDAYELMKSM-HEPHAGAWGALLGACKLHGDSDLGEIVANQLFELE 302
+ C+VD+ SR+G L +AY ++ M EP A AW A L C+++ + +L +I A +LFE++
Sbjct: 720 YTCVVDIYSRAGCLEEAYGFIQRMPMEPTAIAWKAFLAGCRVYKNVELAKISAKKLFEID 779
Query: 303 PQNAANYILLSNIYAAAERWIDVSLVRSRMRERSVQKIPGCS 344
P +ANY+ L NI A+ W + S +R M+ER + K PGCS
Sbjct: 780 PNGSANYVTLFNILVTAKLWSEASKIRKLMKERGITKTPGCS 821
Score = 93.2 bits (230), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 74/308 (24%), Positives = 135/308 (43%), Gaps = 47/308 (15%)
Query: 1 MPQRNVASWNAML-----CGFVKDG------------------------------DLSSA 25
MP RNV +WN++ CGF + G DL S
Sbjct: 303 MPHRNVITWNSLASCYVNCGFPQKGLNVFREMGLNGVKPDPMAMSSILPACSQLKDLKSG 362
Query: 26 R-----GVFDAMPEKNVVSFTTMIDGYAKAGDMAAARFLFEQATEKDVVAWSALISGYVQ 80
+ V M E +V T +++ YA + A+ +F+ ++VV W++L S YV
Sbjct: 363 KTIHGFAVKHGMVE-DVFVCTALVNLYANCLCVREAQTVFDLMPHRNVVTWNSLSSCYVN 421
Query: 81 NGQPNQALKVFLEMESKNVKPDEFILVSLMSATSQLGHLELAQWVDSYVSKSSIDLQQDH 140
G P + L VF EM VKPD ++S++ A S L L+ + + + + + ++
Sbjct: 422 CGFPQKGLNVFREMVLNGVKPDLVTMLSILHACSDLQDLKSGKVIHGFAVRHGM-VEDVF 480
Query: 141 VIAALLDMNAKCGNMDRALKLFKEMPKRDLVSYCSMIQGLSIHGCGEDAVRLFNSMLMEG 200
V ALL + AKC + A +F +P R++ S+ ++ + E + +F+ M +
Sbjct: 481 VCNALLSLYAKCVCVREAQVVFDLIPHREVASWNGILTAYFTNKEYEKGLYMFSQMNRDE 540
Query: 201 LVPDEVAFTIILTACSHSGLVDEGWNYFQSMKQKYGISPSPDHFACMVDLLSRSGHLGDA 260
+ DE+ +++++ C + ++E F+ M Q G P ++ R+ L +
Sbjct: 541 VKADEITWSVVIGGCVKNSRIEEAMEIFRKM-QTMGFKPDETTIYSIL----RACSLSEC 595
Query: 261 YELMKSMH 268
+ K +H
Sbjct: 596 LRMGKEIH 603
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 52/174 (29%), Positives = 90/174 (51%), Gaps = 1/174 (0%)
Query: 43 MIDGYAKAGDMAAARFLFEQATEKDVVAWSALISGYVQNGQPNQALKVFLEMESKNVKPD 102
I Y K + AR +F+ +DVV W++L + YV G P Q L VF +M VK +
Sbjct: 81 FIHAYGKCKCVEGARRVFDDLVARDVVTWNSLSACYVNCGFPQQGLNVFRKMGLNKVKAN 140
Query: 103 EFILVSLMSATSQLGHLELAQWVDSYVSKSSIDLQQDHVIAALLDMNAKCGNMDRALKLF 162
+ S++ S L L+ + + +V + + ++ V +A ++ AKC + A +F
Sbjct: 141 PLTVSSILPGCSDLQDLKSGKEIHGFVVRHGM-VEDVFVSSAFVNFYAKCLCVREAQTVF 199
Query: 163 KEMPKRDLVSYCSMIQGLSIHGCGEDAVRLFNSMLMEGLVPDEVAFTIILTACS 216
MP RD+V++ S+ G + + +F M+++G+ PD V + IL+ACS
Sbjct: 200 DLMPHRDVVTWNSLSSCYVNCGFPQKGLNVFREMVLDGVKPDPVTVSCILSACS 253
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 65/246 (26%), Positives = 117/246 (47%), Gaps = 6/246 (2%)
Query: 35 KNVVSFTTMIDGYAKAGDMAAARFLFEQATEKDVVAWSALISGYVQNGQPNQALKVFLEM 94
++V + ++ YAK + A+ +F+ +DVV W++L S YV G P + L VF EM
Sbjct: 174 EDVFVSSAFVNFYAKCLCVREAQTVFDLMPHRDVVTWNSLSSCYVNCGFPQKGLNVFREM 233
Query: 95 ESKNVKPDEFILVSLMSATSQLGHLELAQWVDSYVSKSSIDLQQDHVIAALLDMNAKCGN 154
VKPD + ++SA S L L+ + + + K + ++ V AL+++ C
Sbjct: 234 VLDGVKPDPVTVSCILSACSDLQDLKSGKAIHGFALKHGM-VENVFVSNALVNLYESCLC 292
Query: 155 MDRALKLFKEMPKRDLVSYCSMIQGLSIHGCGEDAVRLFNSMLMEGLVPDEVAFTIILTA 214
+ A +F MP R+++++ S+ G + + +F M + G+ PD +A + IL A
Sbjct: 293 VREAQAVFDLMPHRNVITWNSLASCYVNCGFPQKGLNVFREMGLNGVKPDPMAMSSILPA 352
Query: 215 CSHSGLVDEGWNYFQSMKQKYGISPSPDHFAC--MVDLLSRSGHLGDAYELMKSMHEPHA 272
CS + G K+G+ D F C +V+L + + +A + M +
Sbjct: 353 CSQLKDLKSG-KTIHGFAVKHGM--VEDVFVCTALVNLYANCLCVREAQTVFDLMPHRNV 409
Query: 273 GAWGAL 278
W +L
Sbjct: 410 VTWNSL 415
>Medtr4g074150.2 | PPR containing plant-like protein | HC |
chr4:28198214-28202779 | 20130731
Length = 606
Score = 233 bits (594), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 131/384 (34%), Positives = 206/384 (53%), Gaps = 42/384 (10%)
Query: 2 PQRNVASWNAMLCGFVKDGDLSSARGVFDAMPEKNVV----------------------- 38
P+R++ +W A++ GFVK+G A F M K VV
Sbjct: 168 PERDIVAWTALINGFVKNGVPGEALRCFVEMRLKGVVIDGFTVASVLRAAALVGDYCFGK 227
Query: 39 -----------------SFTTMIDGYAKAGDMAAARFLFEQATEKDVVAWSALISGYVQN 81
+ ++D Y K G A +F++ +DVVAW+ +++G+VQ
Sbjct: 228 RVHGFYVETGRVVLDGSVYCALVDMYFKCGYCEDACKVFDEMPYRDVVAWTVVVAGFVQC 287
Query: 82 GQPNQALKVFLEMESKNVKPDEFILVSLMSATSQLGHLELAQWVDSYVSKSSIDLQQDHV 141
+ AL F M NV P+EF L S++SA + +G L+ + V Y+ + +L +
Sbjct: 288 KKYQDALSFFRRMLLDNVVPNEFTLTSVLSACAHVGALDQGRLVHRYMEHNDCNLNAV-L 346
Query: 142 IAALLDMNAKCGNMDRALKLFKEMPKRDLVSYCSMIQGLSIHGCGEDAVRLFNSMLMEGL 201
+L+DM AKCG +D+AL +F+ + +++ ++ +MI GL++HG A+ +F+ ML GL
Sbjct: 347 GTSLVDMYAKCGCVDKALMVFENLQVKNVHTWTAMINGLAVHGDALGALNIFSRMLESGL 406
Query: 202 VPDEVAFTIILTACSHSGLVDEGWNYFQSMKQKYGISPSPDHFACMVDLLSRSGHLGDAY 261
P++V F +L ACSH G VDEG F+ M+ Y + P+ +H+ CMVDLL R+G L DA
Sbjct: 407 RPNDVTFLGVLGACSHGGFVDEGKKLFEMMRHTYHLKPNMEHYGCMVDLLGRAGCLEDAK 466
Query: 262 ELMKSM-HEPHAGAWGALLGACKLHGDSDLGEIVANQLFELEPQNAANYILLSNIYAAAE 320
+++ +M +P G GALLGAC H D +GE + N L L+ + Y LL+N+Y+ +
Sbjct: 467 QIIDNMPMKPSPGVLGALLGACVSHKDFVMGEHIGNILVNLQQNHNTGYALLANLYSTCQ 526
Query: 321 RWIDVSLVRSRMRERSVQKIPGCS 344
W V+ VR M+ V+K PG S
Sbjct: 527 NWEAVARVRKLMKGTQVEKTPGYS 550
Score = 141 bits (355), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 75/246 (30%), Positives = 137/246 (55%), Gaps = 1/246 (0%)
Query: 43 MIDGYAKAGDMAAARFLFEQATEKDVVAWSALISGYVQNGQPNQALKVFLEMESKNVKPD 102
I + +G M A +F+++ E+D+VAW+ALI+G+V+NG P +AL+ F+EM K V D
Sbjct: 147 FISAFGCSGFMKNACKVFDESPERDIVAWTALINGFVKNGVPGEALRCFVEMRLKGVVID 206
Query: 103 EFILVSLMSATSQLGHLELAQWVDSYVSKSSIDLQQDHVIAALLDMNAKCGNMDRALKLF 162
F + S++ A + +G + V + ++ + V AL+DM KCG + A K+F
Sbjct: 207 GFTVASVLRAAALVGDYCFGKRVHGFYVETGRVVLDGSVYCALVDMYFKCGYCEDACKVF 266
Query: 163 KEMPKRDLVSYCSMIQGLSIHGCGEDAVRLFNSMLMEGLVPDEVAFTIILTACSHSGLVD 222
EMP RD+V++ ++ G +DA+ F ML++ +VP+E T +L+AC+H G +D
Sbjct: 267 DEMPYRDVVAWTVVVAGFVQCKKYQDALSFFRRMLLDNVVPNEFTLTSVLSACAHVGALD 326
Query: 223 EGWNYFQSMKQKYGISPSPDHFACMVDLLSRSGHLGDAYELMKSMHEPHAGAWGALLGAC 282
+G + M+ + + +VD+ ++ G + A + +++ + W A++
Sbjct: 327 QGRLVHRYMEHN-DCNLNAVLGTSLVDMYAKCGCVDKALMVFENLQVKNVHTWTAMINGL 385
Query: 283 KLHGDS 288
+HGD+
Sbjct: 386 AVHGDA 391
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 62/235 (26%), Positives = 100/235 (42%), Gaps = 22/235 (9%)
Query: 1 MPQRNVASWNAMLCGFVKDGDLSSARGVFDAMPEKNVV----SFTTMIDGYAKAGDMAAA 56
MP R+V +W ++ GFV+ A F M NVV + T+++ A G +
Sbjct: 269 MPYRDVVAWTVVVAGFVQCKKYQDALSFFRRMLLDNVVPNEFTLTSVLSACAHVGALDQG 328
Query: 57 RFLFEQATEKDV----VAWSALISGYVQNGQPNQALKVFLEMESKNVKPDEFILVSLMSA 112
R + D V ++L+ Y + G ++AL VF ++ KNV ++ L
Sbjct: 329 RLVHRYMEHNDCNLNAVLGTSLVDMYAKCGCVDKALMVFENLQVKNVHTWTAMINGLAVH 388
Query: 113 TSQLGHLELAQWVDSYVSKSSIDLQQDHVIAALLDMNAKCGNMDRALKLFKEMP-----K 167
LG L + S + +S + D +L + G +D KLF+ M K
Sbjct: 389 GDALGALNIF----SRMLESGLR-PNDVTFLGVLGACSHGGFVDEGKKLFEMMRHTYHLK 443
Query: 168 RDLVSYCSMIQGLSIHGCGEDAVRLFNSMLMEGLVPDEVAFTIILTAC-SHSGLV 221
++ Y M+ L GC EDA ++ ++M M+ P +L AC SH V
Sbjct: 444 PNMEHYGCMVDLLGRAGCLEDAKQIIDNMPMK---PSPGVLGALLGACVSHKDFV 495
>Medtr4g074150.1 | PPR containing plant-like protein | HC |
chr4:28198256-28202779 | 20130731
Length = 606
Score = 233 bits (594), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 131/384 (34%), Positives = 206/384 (53%), Gaps = 42/384 (10%)
Query: 2 PQRNVASWNAMLCGFVKDGDLSSARGVFDAMPEKNVV----------------------- 38
P+R++ +W A++ GFVK+G A F M K VV
Sbjct: 168 PERDIVAWTALINGFVKNGVPGEALRCFVEMRLKGVVIDGFTVASVLRAAALVGDYCFGK 227
Query: 39 -----------------SFTTMIDGYAKAGDMAAARFLFEQATEKDVVAWSALISGYVQN 81
+ ++D Y K G A +F++ +DVVAW+ +++G+VQ
Sbjct: 228 RVHGFYVETGRVVLDGSVYCALVDMYFKCGYCEDACKVFDEMPYRDVVAWTVVVAGFVQC 287
Query: 82 GQPNQALKVFLEMESKNVKPDEFILVSLMSATSQLGHLELAQWVDSYVSKSSIDLQQDHV 141
+ AL F M NV P+EF L S++SA + +G L+ + V Y+ + +L +
Sbjct: 288 KKYQDALSFFRRMLLDNVVPNEFTLTSVLSACAHVGALDQGRLVHRYMEHNDCNLNAV-L 346
Query: 142 IAALLDMNAKCGNMDRALKLFKEMPKRDLVSYCSMIQGLSIHGCGEDAVRLFNSMLMEGL 201
+L+DM AKCG +D+AL +F+ + +++ ++ +MI GL++HG A+ +F+ ML GL
Sbjct: 347 GTSLVDMYAKCGCVDKALMVFENLQVKNVHTWTAMINGLAVHGDALGALNIFSRMLESGL 406
Query: 202 VPDEVAFTIILTACSHSGLVDEGWNYFQSMKQKYGISPSPDHFACMVDLLSRSGHLGDAY 261
P++V F +L ACSH G VDEG F+ M+ Y + P+ +H+ CMVDLL R+G L DA
Sbjct: 407 RPNDVTFLGVLGACSHGGFVDEGKKLFEMMRHTYHLKPNMEHYGCMVDLLGRAGCLEDAK 466
Query: 262 ELMKSM-HEPHAGAWGALLGACKLHGDSDLGEIVANQLFELEPQNAANYILLSNIYAAAE 320
+++ +M +P G GALLGAC H D +GE + N L L+ + Y LL+N+Y+ +
Sbjct: 467 QIIDNMPMKPSPGVLGALLGACVSHKDFVMGEHIGNILVNLQQNHNTGYALLANLYSTCQ 526
Query: 321 RWIDVSLVRSRMRERSVQKIPGCS 344
W V+ VR M+ V+K PG S
Sbjct: 527 NWEAVARVRKLMKGTQVEKTPGYS 550
Score = 141 bits (355), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 75/246 (30%), Positives = 137/246 (55%), Gaps = 1/246 (0%)
Query: 43 MIDGYAKAGDMAAARFLFEQATEKDVVAWSALISGYVQNGQPNQALKVFLEMESKNVKPD 102
I + +G M A +F+++ E+D+VAW+ALI+G+V+NG P +AL+ F+EM K V D
Sbjct: 147 FISAFGCSGFMKNACKVFDESPERDIVAWTALINGFVKNGVPGEALRCFVEMRLKGVVID 206
Query: 103 EFILVSLMSATSQLGHLELAQWVDSYVSKSSIDLQQDHVIAALLDMNAKCGNMDRALKLF 162
F + S++ A + +G + V + ++ + V AL+DM KCG + A K+F
Sbjct: 207 GFTVASVLRAAALVGDYCFGKRVHGFYVETGRVVLDGSVYCALVDMYFKCGYCEDACKVF 266
Query: 163 KEMPKRDLVSYCSMIQGLSIHGCGEDAVRLFNSMLMEGLVPDEVAFTIILTACSHSGLVD 222
EMP RD+V++ ++ G +DA+ F ML++ +VP+E T +L+AC+H G +D
Sbjct: 267 DEMPYRDVVAWTVVVAGFVQCKKYQDALSFFRRMLLDNVVPNEFTLTSVLSACAHVGALD 326
Query: 223 EGWNYFQSMKQKYGISPSPDHFACMVDLLSRSGHLGDAYELMKSMHEPHAGAWGALLGAC 282
+G + M+ + + +VD+ ++ G + A + +++ + W A++
Sbjct: 327 QGRLVHRYMEHN-DCNLNAVLGTSLVDMYAKCGCVDKALMVFENLQVKNVHTWTAMINGL 385
Query: 283 KLHGDS 288
+HGD+
Sbjct: 386 AVHGDA 391
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 62/235 (26%), Positives = 100/235 (42%), Gaps = 22/235 (9%)
Query: 1 MPQRNVASWNAMLCGFVKDGDLSSARGVFDAMPEKNVV----SFTTMIDGYAKAGDMAAA 56
MP R+V +W ++ GFV+ A F M NVV + T+++ A G +
Sbjct: 269 MPYRDVVAWTVVVAGFVQCKKYQDALSFFRRMLLDNVVPNEFTLTSVLSACAHVGALDQG 328
Query: 57 RFLFEQATEKDV----VAWSALISGYVQNGQPNQALKVFLEMESKNVKPDEFILVSLMSA 112
R + D V ++L+ Y + G ++AL VF ++ KNV ++ L
Sbjct: 329 RLVHRYMEHNDCNLNAVLGTSLVDMYAKCGCVDKALMVFENLQVKNVHTWTAMINGLAVH 388
Query: 113 TSQLGHLELAQWVDSYVSKSSIDLQQDHVIAALLDMNAKCGNMDRALKLFKEMP-----K 167
LG L + S + +S + D +L + G +D KLF+ M K
Sbjct: 389 GDALGALNIF----SRMLESGLR-PNDVTFLGVLGACSHGGFVDEGKKLFEMMRHTYHLK 443
Query: 168 RDLVSYCSMIQGLSIHGCGEDAVRLFNSMLMEGLVPDEVAFTIILTAC-SHSGLV 221
++ Y M+ L GC EDA ++ ++M M+ P +L AC SH V
Sbjct: 444 PNMEHYGCMVDLLGRAGCLEDAKQIIDNMPMK---PSPGVLGALLGACVSHKDFV 495
>Medtr8g069550.1 | PPR containing plant-like protein | HC |
chr8:29180878-29178605 | 20130731
Length = 757
Score = 233 bits (593), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 125/385 (32%), Positives = 214/385 (55%), Gaps = 43/385 (11%)
Query: 1 MPQRNVASWNAMLCGFVKDGDLSSARGVFDAMP--------------------------- 33
M +R+ SW +M+ GF ++G A +F M
Sbjct: 244 MRERDSISWTSMITGFTQNGLDRDAIDIFREMKLENLQMDQYTFGSVLTACGCVMALQEG 303
Query: 34 ------------EKNVVSFTTMIDGYAKAGDMAAARFLFEQATEKDVVAWSALISGYVQN 81
+ N+ + ++ Y K ++ +A +F++ T K+VV+W+A++ GY QN
Sbjct: 304 KQVHAYIIRTDYKDNIFVASALVVMYCKCKNIKSAEAVFKKMTCKNVVSWTAMLVGYGQN 363
Query: 82 GQPNQALKVFLEMESKNVKPDEFILVSLMSATSQLGHLEL-AQWVDSYVSKSSIDLQQDH 140
G +A+K F +M+ ++PD+F L S++S+ + L LE AQ+ ++ I
Sbjct: 364 GYSEEAVKTFSDMQKYGIEPDDFTLGSVISSCANLASLEEGAQFHARALTSGLISFIT-- 421
Query: 141 VIAALLDMNAKCGNMDRALKLFKEMPKRDLVSYCSMIQGLSIHGCGEDAVRLFNSMLMEG 200
V AL+ + KCG+++ + +LF E+ +D V++ +++ G + G + + LF SML G
Sbjct: 422 VSNALVTLYGKCGSIEDSHRLFNEISFKDEVTWTALVSGYAQFGKANETIGLFESMLAHG 481
Query: 201 LVPDEVAFTIILTACSHSGLVDEGWNYFQSMKQKYGISPSPDHFACMVDLLSRSGHLGDA 260
L PD+V F +L+ACS +GLV++G F+SM ++GI P DH+ CM+DL SR+G + +A
Sbjct: 482 LKPDKVTFIGVLSACSRAGLVEKGNQIFESMINEHGIVPIQDHYTCMIDLFSRAGRIEEA 541
Query: 261 YELMKSM-HEPHAGAWGALLGACKLHGDSDLGEIVANQLFELEPQNAANYILLSNIYAAA 319
+ M P A +W LL +C+ +G+ D+G+ A L EL+P N A+Y+LLS++YAA
Sbjct: 542 RNFINKMPFSPDAISWATLLSSCRFYGNMDIGKWAAEFLMELDPHNTASYVLLSSVYAAK 601
Query: 320 ERWIDVSLVRSRMRERSVQKIPGCS 344
+W +V+ +R MR++ ++K PGCS
Sbjct: 602 GKWEEVARLRKDMRDKGLRKEPGCS 626
Score = 137 bits (346), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 78/275 (28%), Positives = 152/275 (55%), Gaps = 4/275 (1%)
Query: 16 FVKDGDLSSARGVFDAMPEKNVVSFTTMIDGYAKAGDMAAARFLFEQATEKDVVAWSALI 75
+ K G +S AR VFD +PEKNVV + T+I G + G + ++ LF + E+D ++W+++I
Sbjct: 197 YSKMGMISCARKVFDELPEKNVVMYNTLIMGLMRCGRVEDSKRLFFEMRERDSISWTSMI 256
Query: 76 SGYVQNGQPNQALKVFLEMESKNVKPDEFILVSLMSATSQLGHLELAQWVDSYVSKSSID 135
+G+ QNG A+ +F EM+ +N++ D++ S+++A + L+ + V +Y+ ++ D
Sbjct: 257 TGFTQNGLDRDAIDIFREMKLENLQMDQYTFGSVLTACGCVMALQEGKQVHAYIIRT--D 314
Query: 136 LQQDHVIA-ALLDMNAKCGNMDRALKLFKEMPKRDLVSYCSMIQGLSIHGCGEDAVRLFN 194
+ + +A AL+ M KC N+ A +FK+M +++VS+ +M+ G +G E+AV+ F+
Sbjct: 315 YKDNIFVASALVVMYCKCKNIKSAEAVFKKMTCKNVVSWTAMLVGYGQNGYSEEAVKTFS 374
Query: 195 SMLMEGLVPDEVAFTIILTACSHSGLVDEGWNYFQSMKQKYGISPSPDHFACMVDLLSRS 254
M G+ PD+ ++++C++ ++EG F + G+ +V L +
Sbjct: 375 DMQKYGIEPDDFTLGSVISSCANLASLEEGAQ-FHARALTSGLISFITVSNALVTLYGKC 433
Query: 255 GHLGDAYELMKSMHEPHAGAWGALLGACKLHGDSD 289
G + D++ L + W AL+ G ++
Sbjct: 434 GSIEDSHRLFNEISFKDEVTWTALVSGYAQFGKAN 468
Score = 103 bits (258), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 67/234 (28%), Positives = 122/234 (52%), Gaps = 7/234 (2%)
Query: 1 MPQRNVASWNAMLCGFVKDGDLSSARGVFDAMPEKNVVSFTTMIDGYAKAGDMAAARFLF 60
+P N ++ + K G + A VFD MP N+ S+ T++ Y+K G ++ +LF
Sbjct: 48 LPYPETFLLNNLISSYAKLGSIPYACKVFDQMPHPNLYSWNTILSAYSKLGRVSEMEYLF 107
Query: 61 EQATEKDVVAWSALISGYVQNGQPNQALKVFLEM--ESKNVKPDEFILVSLMSATSQLGH 118
+ +D V+W++LISGY G Q++K + M + + +L+ S+ G
Sbjct: 108 DAMPRRDGVSWNSLISGYAGCGLIYQSVKAYNLMLKNDGSFNLNRITFSTLLILASKRGC 167
Query: 119 LELAQWVDSYVSKSSIDLQQDHVIAALLDMNAKCGNMDRALKLFKEMPKRDLVSYCSMIQ 178
++L + + +V K + V + L+DM +K G + A K+F E+P++++V Y ++I
Sbjct: 168 VKLGRQIHGHVVKFGF-MSYVFVGSPLVDMYSKMGMISCARKVFDELPEKNVVMYNTLIM 226
Query: 179 GLSIHGCGEDAVRLFNSMLMEGLVPDEVAFTIILTACSHSGLVDEGWNYFQSMK 232
GL G ED+ RLF M D +++T ++T + +GL + + F+ MK
Sbjct: 227 GLMRCGRVEDSKRLFFEMRER----DSISWTSMITGFTQNGLDRDAIDIFREMK 276
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 70/291 (24%), Positives = 133/291 (45%), Gaps = 24/291 (8%)
Query: 1 MPQRNVASWNAMLCGFVKDGDLSSARGVFDAMPEKNVVSFTTMIDGYAKAGDMAAARFLF 60
MP N+ SWN +L + K G +S +FDAMP ++ VS+ ++I GYA G + + +
Sbjct: 79 MPHPNLYSWNTILSAYSKLGRVSEMEYLFDAMPRRDGVSWNSLISGYAGCGLIYQSVKAY 138
Query: 61 EQATEKD------VVAWSALISGYVQNGQPNQALKVFLEMESKNVKPDEFILVSLMSATS 114
+ D + +S L+ + G ++ + F+ L+ S
Sbjct: 139 NLMLKNDGSFNLNRITFSTLLILASKRGCVKLGRQIHGHVVKFGFMSYVFVGSPLVDMYS 198
Query: 115 QLGHLELAQWVDSYVSKSSIDLQQDHVIAALLDMNAKCGNMDRALKLFKEMPKRDLVSYC 174
++G + A+ V + + ++ + ++ + +CG ++ + +LF EM +RD +S+
Sbjct: 199 KMGMISCARKVFDELPEKNVVMYNTLIMGLM-----RCGRVEDSKRLFFEMRERDSISWT 253
Query: 175 SMIQGLSIHGCGEDAVRLFNSMLMEGLVPDEVAFTIILTACSHSGLVDEGWNYFQSMKQK 234
SMI G + +G DA+ +F M +E L D+ F +LTAC + EG KQ
Sbjct: 254 SMITGFTQNGLDRDAIDIFREMKLENLQMDQYTFGSVLTACGCVMALQEG-------KQV 306
Query: 235 YGISPSPDH------FACMVDLLSRSGHLGDAYELMKSMHEPHAGAWGALL 279
+ D+ + +V + + ++ A + K M + +W A+L
Sbjct: 307 HAYIIRTDYKDNIFVASALVVMYCKCKNIKSAEAVFKKMTCKNVVSWTAML 357
>Medtr8g069550.2 | PPR containing plant-like protein | HC |
chr8:29180878-29178605 | 20130731
Length = 757
Score = 233 bits (593), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 125/385 (32%), Positives = 214/385 (55%), Gaps = 43/385 (11%)
Query: 1 MPQRNVASWNAMLCGFVKDGDLSSARGVFDAMP--------------------------- 33
M +R+ SW +M+ GF ++G A +F M
Sbjct: 244 MRERDSISWTSMITGFTQNGLDRDAIDIFREMKLENLQMDQYTFGSVLTACGCVMALQEG 303
Query: 34 ------------EKNVVSFTTMIDGYAKAGDMAAARFLFEQATEKDVVAWSALISGYVQN 81
+ N+ + ++ Y K ++ +A +F++ T K+VV+W+A++ GY QN
Sbjct: 304 KQVHAYIIRTDYKDNIFVASALVVMYCKCKNIKSAEAVFKKMTCKNVVSWTAMLVGYGQN 363
Query: 82 GQPNQALKVFLEMESKNVKPDEFILVSLMSATSQLGHLEL-AQWVDSYVSKSSIDLQQDH 140
G +A+K F +M+ ++PD+F L S++S+ + L LE AQ+ ++ I
Sbjct: 364 GYSEEAVKTFSDMQKYGIEPDDFTLGSVISSCANLASLEEGAQFHARALTSGLISFIT-- 421
Query: 141 VIAALLDMNAKCGNMDRALKLFKEMPKRDLVSYCSMIQGLSIHGCGEDAVRLFNSMLMEG 200
V AL+ + KCG+++ + +LF E+ +D V++ +++ G + G + + LF SML G
Sbjct: 422 VSNALVTLYGKCGSIEDSHRLFNEISFKDEVTWTALVSGYAQFGKANETIGLFESMLAHG 481
Query: 201 LVPDEVAFTIILTACSHSGLVDEGWNYFQSMKQKYGISPSPDHFACMVDLLSRSGHLGDA 260
L PD+V F +L+ACS +GLV++G F+SM ++GI P DH+ CM+DL SR+G + +A
Sbjct: 482 LKPDKVTFIGVLSACSRAGLVEKGNQIFESMINEHGIVPIQDHYTCMIDLFSRAGRIEEA 541
Query: 261 YELMKSM-HEPHAGAWGALLGACKLHGDSDLGEIVANQLFELEPQNAANYILLSNIYAAA 319
+ M P A +W LL +C+ +G+ D+G+ A L EL+P N A+Y+LLS++YAA
Sbjct: 542 RNFINKMPFSPDAISWATLLSSCRFYGNMDIGKWAAEFLMELDPHNTASYVLLSSVYAAK 601
Query: 320 ERWIDVSLVRSRMRERSVQKIPGCS 344
+W +V+ +R MR++ ++K PGCS
Sbjct: 602 GKWEEVARLRKDMRDKGLRKEPGCS 626
Score = 137 bits (346), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 78/275 (28%), Positives = 152/275 (55%), Gaps = 4/275 (1%)
Query: 16 FVKDGDLSSARGVFDAMPEKNVVSFTTMIDGYAKAGDMAAARFLFEQATEKDVVAWSALI 75
+ K G +S AR VFD +PEKNVV + T+I G + G + ++ LF + E+D ++W+++I
Sbjct: 197 YSKMGMISCARKVFDELPEKNVVMYNTLIMGLMRCGRVEDSKRLFFEMRERDSISWTSMI 256
Query: 76 SGYVQNGQPNQALKVFLEMESKNVKPDEFILVSLMSATSQLGHLELAQWVDSYVSKSSID 135
+G+ QNG A+ +F EM+ +N++ D++ S+++A + L+ + V +Y+ ++ D
Sbjct: 257 TGFTQNGLDRDAIDIFREMKLENLQMDQYTFGSVLTACGCVMALQEGKQVHAYIIRT--D 314
Query: 136 LQQDHVIA-ALLDMNAKCGNMDRALKLFKEMPKRDLVSYCSMIQGLSIHGCGEDAVRLFN 194
+ + +A AL+ M KC N+ A +FK+M +++VS+ +M+ G +G E+AV+ F+
Sbjct: 315 YKDNIFVASALVVMYCKCKNIKSAEAVFKKMTCKNVVSWTAMLVGYGQNGYSEEAVKTFS 374
Query: 195 SMLMEGLVPDEVAFTIILTACSHSGLVDEGWNYFQSMKQKYGISPSPDHFACMVDLLSRS 254
M G+ PD+ ++++C++ ++EG F + G+ +V L +
Sbjct: 375 DMQKYGIEPDDFTLGSVISSCANLASLEEGAQ-FHARALTSGLISFITVSNALVTLYGKC 433
Query: 255 GHLGDAYELMKSMHEPHAGAWGALLGACKLHGDSD 289
G + D++ L + W AL+ G ++
Sbjct: 434 GSIEDSHRLFNEISFKDEVTWTALVSGYAQFGKAN 468
Score = 103 bits (258), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 67/234 (28%), Positives = 122/234 (52%), Gaps = 7/234 (2%)
Query: 1 MPQRNVASWNAMLCGFVKDGDLSSARGVFDAMPEKNVVSFTTMIDGYAKAGDMAAARFLF 60
+P N ++ + K G + A VFD MP N+ S+ T++ Y+K G ++ +LF
Sbjct: 48 LPYPETFLLNNLISSYAKLGSIPYACKVFDQMPHPNLYSWNTILSAYSKLGRVSEMEYLF 107
Query: 61 EQATEKDVVAWSALISGYVQNGQPNQALKVFLEM--ESKNVKPDEFILVSLMSATSQLGH 118
+ +D V+W++LISGY G Q++K + M + + +L+ S+ G
Sbjct: 108 DAMPRRDGVSWNSLISGYAGCGLIYQSVKAYNLMLKNDGSFNLNRITFSTLLILASKRGC 167
Query: 119 LELAQWVDSYVSKSSIDLQQDHVIAALLDMNAKCGNMDRALKLFKEMPKRDLVSYCSMIQ 178
++L + + +V K + V + L+DM +K G + A K+F E+P++++V Y ++I
Sbjct: 168 VKLGRQIHGHVVKFGF-MSYVFVGSPLVDMYSKMGMISCARKVFDELPEKNVVMYNTLIM 226
Query: 179 GLSIHGCGEDAVRLFNSMLMEGLVPDEVAFTIILTACSHSGLVDEGWNYFQSMK 232
GL G ED+ RLF M D +++T ++T + +GL + + F+ MK
Sbjct: 227 GLMRCGRVEDSKRLFFEMRER----DSISWTSMITGFTQNGLDRDAIDIFREMK 276
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 70/291 (24%), Positives = 133/291 (45%), Gaps = 24/291 (8%)
Query: 1 MPQRNVASWNAMLCGFVKDGDLSSARGVFDAMPEKNVVSFTTMIDGYAKAGDMAAARFLF 60
MP N+ SWN +L + K G +S +FDAMP ++ VS+ ++I GYA G + + +
Sbjct: 79 MPHPNLYSWNTILSAYSKLGRVSEMEYLFDAMPRRDGVSWNSLISGYAGCGLIYQSVKAY 138
Query: 61 EQATEKD------VVAWSALISGYVQNGQPNQALKVFLEMESKNVKPDEFILVSLMSATS 114
+ D + +S L+ + G ++ + F+ L+ S
Sbjct: 139 NLMLKNDGSFNLNRITFSTLLILASKRGCVKLGRQIHGHVVKFGFMSYVFVGSPLVDMYS 198
Query: 115 QLGHLELAQWVDSYVSKSSIDLQQDHVIAALLDMNAKCGNMDRALKLFKEMPKRDLVSYC 174
++G + A+ V + + ++ + ++ + +CG ++ + +LF EM +RD +S+
Sbjct: 199 KMGMISCARKVFDELPEKNVVMYNTLIMGLM-----RCGRVEDSKRLFFEMRERDSISWT 253
Query: 175 SMIQGLSIHGCGEDAVRLFNSMLMEGLVPDEVAFTIILTACSHSGLVDEGWNYFQSMKQK 234
SMI G + +G DA+ +F M +E L D+ F +LTAC + EG KQ
Sbjct: 254 SMITGFTQNGLDRDAIDIFREMKLENLQMDQYTFGSVLTACGCVMALQEG-------KQV 306
Query: 235 YGISPSPDH------FACMVDLLSRSGHLGDAYELMKSMHEPHAGAWGALL 279
+ D+ + +V + + ++ A + K M + +W A+L
Sbjct: 307 HAYIIRTDYKDNIFVASALVVMYCKCKNIKSAEAVFKKMTCKNVVSWTAML 357
>Medtr3g026690.1 | PPR containing plant-like protein | HC |
chr3:8195048-8190900 | 20130731
Length = 944
Score = 232 bits (591), Expect = 5e-61, Method: Compositional matrix adjust.
Identities = 123/335 (36%), Positives = 192/335 (57%), Gaps = 5/335 (1%)
Query: 14 CGFVKDGDLSSAR--GVFDAMPEKNVVSFTTMIDGYAKAGDMAAARFLFEQATE-KDVVA 70
C + D DL + G+ + E ++ ++D YAK G + + LF KD V+
Sbjct: 511 CAIMDDLDLGTCLHGGIEKSGFESDIHVKVALMDMYAKCGSLCSVERLFLLTKHVKDEVS 570
Query: 71 WSALISGYVQNGQPNQALKVFLEMESKNVKPDEFILVSLMSATSQLGHLELAQWVDSYVS 130
W+ +I+GY+ NG N+A+ F M+ +NV+P+ V+++ A S L L A + +
Sbjct: 571 WNVMIAGYLHNGYSNEAISTFRRMKLENVRPNLVTFVTILPAVSYLSILREAMAFHTCII 630
Query: 131 KSSIDLQQDHVIAALLDMNAKCGNMDRALKLFKEMPKRDLVSYCSMIQGLSIHGCGEDAV 190
+ L + +L+DM AKCG + + K F EM +D +S+ +M+ ++HG GE AV
Sbjct: 631 RMGF-LSCTLIGNSLIDMYAKCGQLRYSEKCFHEMENKDTISWNAMLSAYAMHGQGELAV 689
Query: 191 RLFNSMLMEGLVPDEVAFTIILTACSHSGLVDEGWNYFQSMKQKYGISPSPDHFACMVDL 250
LF+ M + D V++ +L+AC HSGL+ EGW+ F SM +K+ + PS +H+ACMVDL
Sbjct: 690 ALFSVMQESNVRVDSVSYISVLSACRHSGLIQEGWDIFASMCEKHHVEPSMEHYACMVDL 749
Query: 251 LSRSGHLGDAYELMKSM-HEPHAGAWGALLGACKLHGDSDLGEIVANQLFELEPQNAANY 309
L +G + L+ M EP A WGALL ACK+H + LGE+ + L +LEP+N ++
Sbjct: 750 LGCAGLFDEVLSLLNKMTTEPDARVWGALLAACKIHSNVTLGEVAVHHLLKLEPRNPVHH 809
Query: 310 ILLSNIYAAAERWIDVSLVRSRMRERSVQKIPGCS 344
++LS+IYA RW D RS + ++KIPG S
Sbjct: 810 VVLSDIYAQCGRWNDARRTRSHINNHGLKKIPGYS 844
Score = 110 bits (276), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 73/259 (28%), Positives = 125/259 (48%), Gaps = 3/259 (1%)
Query: 34 EKNVVSFTTMIDGYAKAGDMAAARFLFEQATEKDVVAWSALISGYVQNGQPNQALKVFLE 93
E ++ TT++ Y + A LF + KD+V W+ LI+G+ + G P+ AL++F
Sbjct: 432 ESDISMVTTLVSMYIRFELFTYAMTLFNRMQIKDIVVWNTLINGFTKYGDPHLALEMFNR 491
Query: 94 MESKNVKPDEFILVSLMSATSQLGHLELAQWVDSYVSKSSIDLQQDHVIAALLDMNAKCG 153
++ + PD +V L SA + + L+L + + KS + HV AL+DM AKCG
Sbjct: 492 LQLSGILPDSGTMVGLFSACAIMDDLDLGTCLHGGIEKSGFE-SDIHVKVALMDMYAKCG 550
Query: 154 NMDRALKLFKEMPK-RDLVSYCSMIQGLSIHGCGEDAVRLFNSMLMEGLVPDEVAFTIIL 212
++ +LF +D VS+ MI G +G +A+ F M +E + P+ V F IL
Sbjct: 551 SLCSVERLFLLTKHVKDEVSWNVMIAGYLHNGYSNEAISTFRRMKLENVRPNLVTFVTIL 610
Query: 213 TACSHSGLVDEGWNYFQSMKQKYGISPSPDHFACMVDLLSRSGHLGDAYELMKSMHEPHA 272
A S+ ++ E F + + G ++D+ ++ G L + + M
Sbjct: 611 PAVSYLSILREAMA-FHTCIIRMGFLSCTLIGNSLIDMYAKCGQLRYSEKCFHEMENKDT 669
Query: 273 GAWGALLGACKLHGDSDLG 291
+W A+L A +HG +L
Sbjct: 670 ISWNAMLSAYAMHGQGELA 688
Score = 102 bits (253), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 77/330 (23%), Positives = 148/330 (44%), Gaps = 44/330 (13%)
Query: 1 MPQRNVASWNAMLCGFVKDG-----------------------------------DLSSA 25
M R+ SW M+ G+VK+G DL
Sbjct: 259 MGVRDDVSWATMMAGYVKNGCYFEGLQLLHKMRRGNVKMNKVAVVNALLVVAEMRDLEKG 318
Query: 26 RGVFDAMPE----KNVVSFTTMIDGYAKAGDMAAARFLFEQATEKDVVAWSALISGYVQN 81
+ +++ + ++V T ++ YAK G++ AR LF +D+VAWSA +S V+
Sbjct: 319 KEIYNYALQMGLMSDIVVATPIVCMYAKCGELKKARELFLSLEGRDLVAWSAFLSALVET 378
Query: 82 GQPNQALKVFLEMESKNVKPDEFILVSLMSATSQLGHLELAQWVDSYVSKSSIDLQQD-H 140
G P + L +F M+ + +KPD+ IL L+S +++ ++ L + + Y K+ D++ D
Sbjct: 379 GYPREVLSIFQVMQYEGLKPDKAILSILVSGCTEISNIGLGKIMHCYAIKA--DMESDIS 436
Query: 141 VIAALLDMNAKCGNMDRALKLFKEMPKRDLVSYCSMIQGLSIHGCGEDAVRLFNSMLMEG 200
++ L+ M + A+ LF M +D+V + ++I G + +G A+ +FN + + G
Sbjct: 437 MVTTLVSMYIRFELFTYAMTLFNRMQIKDIVVWNTLINGFTKYGDPHLALEMFNRLQLSG 496
Query: 201 LVPDEVAFTIILTACSHSGLVDEGWNYFQSMKQKYGISPSPDHFACMVDLLSRSGHLGDA 260
++PD + +AC+ +D G +K G ++D+ ++ G L
Sbjct: 497 ILPDSGTMVGLFSACAIMDDLDLG-TCLHGGIEKSGFESDIHVKVALMDMYAKCGSLCSV 555
Query: 261 YEL-MKSMHEPHAGAWGALLGACKLHGDSD 289
L + + H +W ++ +G S+
Sbjct: 556 ERLFLLTKHVKDEVSWNVMIAGYLHNGYSN 585
Score = 93.6 bits (231), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 76/257 (29%), Positives = 132/257 (51%), Gaps = 11/257 (4%)
Query: 28 VFDAMPEKNVVSFTTMIDGYAKAGDMAAARFLFEQATEKDVVAWSALISGYVQNGQPNQA 87
VF+ + E +V T++ID + K G + AR +F++ KD V W+A+ISG Q+ P +A
Sbjct: 126 VFNGL-ECDVYIGTSLIDMFCKMGCLDNARNVFDKMPVKDGVCWNAMISGLSQSLNPCEA 184
Query: 88 LKVFLEMESKNVKPDEFILVSLMSATSQLGHLELAQWVDSYVSKSSIDLQQDHVIAALLD 147
L++F M+ + + D+ +++L A S+LG + + + YV + SI V +L+D
Sbjct: 185 LEMFWRMQMEGFEVDKVSILNLAPAVSRLGDVGCCKSIHGYVVRRSI---CGVVSNSLID 241
Query: 148 MNAKCGNMDRALKLFKEMPKRDLVSYCSMIQGLSIHGCGEDAVRLFNSMLMEGLVPDEVA 207
M KCG++ A ++F M RD VS+ +M+ G +GC + ++L + M + ++VA
Sbjct: 242 MYCKCGDVHSAQRVFDRMGVRDDVSWATMMAGYVKNGCYFEGLQLLHKMRRGNVKMNKVA 301
Query: 208 FTIILTACSHSGLVDEG---WNYFQSMKQKYGISPSPDHFACMVDLLSRSGHLGDAYELM 264
L + +++G +NY M I + +V + ++ G L A EL
Sbjct: 302 VVNALLVVAEMRDLEKGKEIYNYALQMGLMSDIVVATP----IVCMYAKCGELKKARELF 357
Query: 265 KSMHEPHAGAWGALLGA 281
S+ AW A L A
Sbjct: 358 LSLEGRDLVAWSAFLSA 374
Score = 65.5 bits (158), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 57/233 (24%), Positives = 96/233 (41%), Gaps = 47/233 (20%)
Query: 4 RNVASWNAMLCGFVKDGDLSSARGVFDAMPEKNV----VSFTT----------------- 42
++ SWN M+ G++ +G + A F M +NV V+F T
Sbjct: 566 KDEVSWNVMIAGYLHNGYSNEAISTFRRMKLENVRPNLVTFVTILPAVSYLSILREAMAF 625
Query: 43 ------------------MIDGYAKAGDMAAARFLFEQATEKDVVAWSALISGYVQNGQP 84
+ID YAK G + + F + KD ++W+A++S Y +GQ
Sbjct: 626 HTCIIRMGFLSCTLIGNSLIDMYAKCGQLRYSEKCFHEMENKDTISWNAMLSAYAMHGQG 685
Query: 85 NQALKVFLEMESKNVKPDEFILVSLMSATSQLGHLELAQW--VDSYVSKSSIDLQQDHVI 142
A+ +F M+ NV+ D +S++SA G ++ W S K ++ +H
Sbjct: 686 ELAVALFSVMQESNVRVDSVSYISVLSACRHSGLIQ-EGWDIFASMCEKHHVEPSMEHY- 743
Query: 143 AALLDMNAKCGNMDRALKLFKEMPKR-DLVSYCSMIQGLSIHG---CGEDAVR 191
A ++D+ G D L L +M D + +++ IH GE AV
Sbjct: 744 ACMVDLLGCAGLFDEVLSLLNKMTTEPDARVWGALLAACKIHSNVTLGEVAVH 796
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 46/193 (23%), Positives = 89/193 (46%), Gaps = 3/193 (1%)
Query: 28 VFDAMPEKNVVSFTTMIDGYAKAGDMAAARFLFEQATEKDVVAWSALISGYVQNGQPNQA 87
+F + N + +I+ + F Q ++ +++ I Y + ++A
Sbjct: 24 IFPIQQQNNNNHYLKLINSCKYINPLLQIHTHFLQIKNPSLILYNSFIKAYSKFHHFHKA 83
Query: 88 LKVFLEMESKNVKPDEFILVSLMSATSQLGHLELAQWVDSYVSKSSIDLQQD-HVIAALL 146
+ ++ + +KPD+F ++ A + L+ + V+ Y L+ D ++ +L+
Sbjct: 84 INLYHTILKIGLKPDKFTFNFVLKACTSA--LDFHEGVNIYKDIVFNGLECDVYIGTSLI 141
Query: 147 DMNAKCGNMDRALKLFKEMPKRDLVSYCSMIQGLSIHGCGEDAVRLFNSMLMEGLVPDEV 206
DM K G +D A +F +MP +D V + +MI GLS +A+ +F M MEG D+V
Sbjct: 142 DMFCKMGCLDNARNVFDKMPVKDGVCWNAMISGLSQSLNPCEALEMFWRMQMEGFEVDKV 201
Query: 207 AFTIILTACSHSG 219
+ + A S G
Sbjct: 202 SILNLAPAVSRLG 214
>Medtr4g064770.1 | pentatricopeptide (PPR) repeat protein | HC |
chr4:24165948-24164077 | 20130731
Length = 550
Score = 231 bits (590), Expect = 6e-61, Method: Compositional matrix adjust.
Identities = 132/356 (37%), Positives = 208/356 (58%), Gaps = 15/356 (4%)
Query: 1 MPQRNVASWNAMLCGFVKDGDLSSARGVFDAMP----EKNVVSFTTMIDGYAKAGDMAAA 56
M +++ + NA++ G+ + G + A + + M NVV++ +I G+A+ D
Sbjct: 193 MVVKDLVAMNAVVSGYAQQGLPNEALSLVENMKLMGVNPNVVTWNALISGFAQKCDREMV 252
Query: 57 ----RFLFEQATEKDVVAWSALISGYVQNGQPNQALKVFLEMESKNVKPDEFILVSLMSA 112
R + E E DVV+W++++SG+VQN + +A F +M P + +L+ A
Sbjct: 253 SEIFRLMNEDRVEPDVVSWTSVLSGFVQNFRNEEAFDAFKKMLLLGFCPTSATISALLPA 312
Query: 113 TSQLGHLELAQWVDSYVSKSSIDLQQD-HVIAALLDMNAKCGNMDRALKLFKEMPKRDLV 171
+ + + + Y I ++ D +V +AL+DM AKCG + A LF +MP+++ V
Sbjct: 313 CATEARVRFGKEIHGYAL--VIGVEDDLYVRSALVDMYAKCGFISEARTLFYKMPEKNTV 370
Query: 172 SYCSMIQGLSIHGCGEDAVRLFNSMLMEGLVP--DEVAFTIILTACSHSGLVDEGWNYFQ 229
+ SMI G + HGC E+A+ LFN M MEG VP D + FT LTACSH G ++ G F+
Sbjct: 371 TMNSMIFGYANHGCCEEAIELFNQMEMEG-VPKLDHLTFTAALTACSHVGDIELGQRLFK 429
Query: 230 SMKQKYGISPSPDHFACMVDLLSRSGHLGDAYELMKSMH-EPHAGAWGALLGACKLHGDS 288
M++KY I P +H+ACMVDL R+G L +AY ++KSM +P WGALL AC+ HG
Sbjct: 430 IMQEKYCIEPRLEHYACMVDLFGRAGKLEEAYGIIKSMPVKPDLFVWGALLAACRNHGHV 489
Query: 289 DLGEIVANQLFELEPQNAANYILLSNIYAAAERWIDVSLVRSRMRERSVQKIPGCS 344
+L E+ A L ELEP++A N +LLS++YA A W V ++ R+++ ++K+ G S
Sbjct: 490 ELAEVAAKHLSELEPESAGNRLLLSSLYADAGTWGKVERIKRRIKKGKLRKLQGLS 545
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 62/258 (24%), Positives = 122/258 (47%), Gaps = 8/258 (3%)
Query: 41 TTMIDGYAKAGDMAAARFLFEQATEKDVVAWSALISGYVQNGQPNQALKVFLEMESKNVK 100
+ +I Y G ++ AR LF++ + ++ W ALI+ + G + AL+VF EM++ N +
Sbjct: 68 SNLITLYTTCGQLSIARKLFDKIPQTNIHRWIALIATCARCGFHDHALEVFSEMQTLNDQ 127
Query: 101 PDE--FILVSLMSATSQLGHLELAQWVDSYVSKSSIDLQQDHVIAALLDMNAKCGNMDRA 158
F++ S++ A +G + V V K S ++ V +AL+ M +KCG + A
Sbjct: 128 KSNSVFVIPSVLKACGHVGDRIYGEQVHCLVLKCSFEIDA-FVSSALIVMYSKCGEVRDA 186
Query: 159 LKLFKEMPKRDLVSYCSMIQGLSIHGCGEDAVRLFNSMLMEGLVPDEVAFTIILTACSHS 218
K+F M +DLV+ +++ G + G +A+ L +M + G+ P+ V + +++ +
Sbjct: 187 RKVFDGMVVKDLVAMNAVVSGYAQQGLPNEALSLVENMKLMGVNPNVVTWNALISGFAQK 246
Query: 219 GLVDEGWNYFQSMKQKYGISPSPDHFACMVDLLSRSGHLGDAYELMKSM----HEPHAGA 274
+ F+ M + + P + ++ ++ +A++ K M P +
Sbjct: 247 CDREMVSEIFRLMNEDR-VEPDVVSWTSVLSGFVQNFRNEEAFDAFKKMLLLGFCPTSAT 305
Query: 275 WGALLGACKLHGDSDLGE 292
ALL AC G+
Sbjct: 306 ISALLPACATEARVRFGK 323
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 66/287 (22%), Positives = 120/287 (41%), Gaps = 34/287 (11%)
Query: 41 TTMIDGYAKAGDMAAARFLFEQATEKDVVAWSALISGYVQNGQPNQALKVFLEMESKNVK 100
+ +I Y+K G++ AR +F+ KD+VA +A++SGY Q G PN+AL + M+ V
Sbjct: 171 SALIVMYSKCGEVRDARKVFDGMVVKDLVAMNAVVSGYAQQGLPNEALSLVENMKLMGVN 230
Query: 101 PDEFILVSLMSATSQLGHLELAQWVDSYVSKSSIDLQQDHVIAALLDMNAKCGNMDRALK 160
P+ +L+S +Q E+ VS+ + +D V
Sbjct: 231 PNVVTWNALISGFAQKCDREM-------VSEIFRLMNEDRV------------------- 264
Query: 161 LFKEMPKRDLVSYCSMIQGLSIHGCGEDAVRLFNSMLMEGLVPDEVAFTIILTACSHSGL 220
+ D+VS+ S++ G + E+A F ML+ G P + +L AC+
Sbjct: 265 ------EPDVVSWTSVLSGFVQNFRNEEAFDAFKKMLLLGFCPTSATISALLPACATEAR 318
Query: 221 VDEGWNYFQSMKQKYGISPSPDHFACMVDLLSRSGHLGDAYELMKSMHEPHAGAWGALLG 280
V G G+ + +VD+ ++ G + +A L M E + +++
Sbjct: 319 VRFG-KEIHGYALVIGVEDDLYVRSALVDMYAKCGFISEARTLFYKMPEKNTVTMNSMIF 377
Query: 281 ACKLHGDSDLGEIVANQLFELEPQNAANYILLSNIYAAAERWIDVSL 327
HG + + NQ+ E+E +++ + A D+ L
Sbjct: 378 GYANHGCCEEAIELFNQM-EMEGVPKLDHLTFTAALTACSHVGDIEL 423
>Medtr4g007160.1 | PPR containing plant-like protein | HC |
chr4:976511-978646 | 20130731
Length = 595
Score = 231 bits (589), Expect = 9e-61, Method: Compositional matrix adjust.
Identities = 130/382 (34%), Positives = 207/382 (54%), Gaps = 39/382 (10%)
Query: 1 MPQRNVASWNAMLCGFVKDGDLSSARGVF---DAMPE----------------------- 34
MP R+V SW ++ G++K G + A +F D P
Sbjct: 170 MPVRDVVSWTGLISGYMKAGLFNDAVALFLRMDVAPNAATFVSILGACGKLGCLNLGKGI 229
Query: 35 ----------KNVVSFTTMIDGYAKAGDMAAARFLFEQATEKDVVAWSALISGYVQNGQP 84
K +V T++D Y K + A+ LF++ EKD+V+W+++ISG VQ P
Sbjct: 230 HGLVSKYPHGKELVVSNTLMDMYVKCESVTDAKRLFDEIPEKDIVSWTSMISGLVQYQCP 289
Query: 85 NQALKVFLEMESKNVKPDEFILVSLMSATSQLGHLELAQWVDSYVSKSSIDLQQDHVIAA 144
++L +F EM +PD IL S++SA + LG L+ +WV Y+ S I H+ +
Sbjct: 290 QESLDLFYEMLGSGFEPDGVILTSVLSACASLGLLDYGRWVHEYIDHSRIKWDV-HIGTS 348
Query: 145 LLDMNAKCGNMDRALKLFKEMPKRDLVSYCSMIQGLSIHGCGEDAVRLFNSMLMEGLVPD 204
L+DM AKCG ++ A ++F +P +++ ++ + I GL+I+G G++A++ F ++ G P+
Sbjct: 349 LIDMYAKCGCIEMAQQMFNLLPSKNIRTWNAYIGGLAINGHGQEALKQFGYLVESGTRPN 408
Query: 205 EVAFTIILTACSHSGLVDEGWNYFQSMKQ-KYGISPSPDHFACMVDLLSRSGHLGDAYEL 263
E+ F + +AC HSGLVDEG +YF+ M Y +SP +H+ CMVDLL R+ + +A EL
Sbjct: 409 EITFLAVFSACCHSGLVDEGRSYFKQMTSPPYNLSPWLEHYGCMVDLLCRAELVEEAMEL 468
Query: 264 MKSM-HEPHAGAWGALLGACKLHGDSDLGEIVANQLFELEPQNAANYILLSNIYAAAERW 322
+ M P GALL A +G+ +L + + E Q + Y+LLSN YA ++W
Sbjct: 469 INKMPMPPDVQIIGALLSASSTYGNVELTPEMLKTVRNFECQESGVYVLLSNWYANNKKW 528
Query: 323 IDVSLVRSRMRERSVQKIPGCS 344
+V VR M+E+ + K PG S
Sbjct: 529 AEVRSVRRLMKEKGISKAPGSS 550
Score = 126 bits (317), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 78/249 (31%), Positives = 133/249 (53%), Gaps = 11/249 (4%)
Query: 41 TTMIDGYAKAGDMAAARFLFEQATEKDVVAWSALISGYVQNGQPNQALKVFLEMESKNVK 100
+ + Y+ GD A +F+ +DVV+W+ LISGY++ G N A+ +FL M+ V
Sbjct: 148 NSFVHVYSICGDTVGASKVFDFMPVRDVVSWTGLISGYMKAGLFNDAVALFLRMD---VA 204
Query: 101 PDEFILVSLMSATSQLGHLELAQWVDSYVSKSSIDLQQDHVIAALLDMNAKCGNMDRALK 160
P+ VS++ A +LG L L + + VSK ++ V L+DM KC ++ A +
Sbjct: 205 PNAATFVSILGACGKLGCLNLGKGIHGLVSKYPHG-KELVVSNTLMDMYVKCESVTDAKR 263
Query: 161 LFKEMPKRDLVSYCSMIQGLSIHGCGEDAVRLFNSMLMEGLVPDEVAFTIILTACSHSGL 220
LF E+P++D+VS+ SMI GL + C ++++ LF ML G PD V T +L+AC+ GL
Sbjct: 264 LFDEIPEKDIVSWTSMISGLVQYQCPQESLDLFYEMLGSGFEPDGVILTSVLSACASLGL 323
Query: 221 VDEG-W--NYFQSMKQKYGISPSPDHFACMVDLLSRSGHLGDAYELMKSMHEPHAGAWGA 277
+D G W Y + K+ + ++D+ ++ G + A ++ + + W A
Sbjct: 324 LDYGRWVHEYIDHSRIKWDVHIGTS----LIDMYAKCGCIEMAQQMFNLLPSKNIRTWNA 379
Query: 278 LLGACKLHG 286
+G ++G
Sbjct: 380 YIGGLAING 388
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 48/207 (23%), Positives = 92/207 (44%), Gaps = 7/207 (3%)
Query: 74 LISGYVQNGQPNQALKVFLEMESKNVKPDEFILVSLMSATSQLGHLELAQWVDSYVSKSS 133
+ISGY P A++++ + PD + + +++ + ++ + + + + K+
Sbjct: 80 IISGYGAGNFPWAAIRIYRWVVGNGFVPDVYTVPAVLKSCARFSGIAEVKQIHTLAVKT- 138
Query: 134 IDLQQDHVIA-ALLDMNAKCGNMDRALKLFKEMPKRDLVSYCSMIQGLSIHGCGEDAVRL 192
DL D + + + + + CG+ A K+F MP RD+VS+ +I G G DAV L
Sbjct: 139 -DLWCDMFVQNSFVHVYSICGDTVGASKVFDFMPVRDVVSWTGLISGYMKAGLFNDAVAL 197
Query: 193 FNSMLMEGLVPDEVAFTIILTACSHSGLVDEGWNYFQSMKQKYGISPSPDHFACMVDLLS 252
F M + P+ F IL AC G ++ G + KY ++D+
Sbjct: 198 FLRM---DVAPNAATFVSILGACGKLGCLNLG-KGIHGLVSKYPHGKELVVSNTLMDMYV 253
Query: 253 RSGHLGDAYELMKSMHEPHAGAWGALL 279
+ + DA L + E +W +++
Sbjct: 254 KCESVTDAKRLFDEIPEKDIVSWTSMI 280
>Medtr2g072010.1 | PPR containing plant-like protein | HC |
chr2:30162883-30164901 | 20130731
Length = 515
Score = 231 bits (588), Expect = 9e-61, Method: Compositional matrix adjust.
Identities = 135/383 (35%), Positives = 210/383 (54%), Gaps = 58/383 (15%)
Query: 1 MPQRNVASWNAML-----------------------------------------CGFVKD 19
MP+RNV SW+AM+ CG VKD
Sbjct: 130 MPERNVVSWSAMIDGYMEKGLFENGFGFFLEMRREGVVEVNSTTMTIMIKGCGNCGGVKD 189
Query: 20 G-------------DLSSARGVFDAMPEKNVVSFTTMIDGYAKAGDMAAARFLFEQATEK 66
G + +A VF+ MPEK+++S+T MI + G M LF+ EK
Sbjct: 190 GMQIHGLVSRLGFEFVDAAYEVFERMPEKDLISWTAMIRRFVTDGRMGKPVELFDTLKEK 249
Query: 67 DVVAWSALISGYVQNGQPNQALKVFLEMESKNVKPDEFILVSLMSATSQLGHLELAQWVD 126
D W+ LISG+V N + +AL ++ M + KP+ + S+++A++ L L +
Sbjct: 250 DDFVWTVLISGFVSNEEYEEALCWYVRMNREGCKPNPLTISSVLAASASLVALNEGLQIH 309
Query: 127 SYVSKSSIDLQQDHVIA-ALLDMNAKCGNMDRALKLFKEMPKRDLVSYCSMIQGLSIHGC 185
S+V K ++L+ D I +L+ AKCGN+ A K+F ++ + ++VS S+I G + +G
Sbjct: 310 SHVLK--MNLEYDLSIQNSLISFYAKCGNVTDAYKIFVDVVELNVVSNNSVINGFTQNGF 367
Query: 186 GEDAVRLFNSMLMEGLVPDEVAFTIILTACSHSGLVDEGWNYFQSMKQKYGISPSPDHFA 245
GE+A+ ++ M E L P+ V F +L+AC+H+GL++EG N F +MK +Y P DH+A
Sbjct: 368 GEEALNMYKRMQNESLEPNRVTFLAVLSACTHAGLIEEGRNLFDTMKSRYRNEPDADHYA 427
Query: 246 CMVDLLSRSGHLGDAYELMKSMH-EPHAGAWGALLGACKLHGDSDLGEIVANQLFELEPQ 304
CMVDLL R+G L +A +L++S+ +PH+G WGALL A H DL ++ A + +LEP
Sbjct: 428 CMVDLLGRAGLLDEANDLIRSITVKPHSGVWGALLAASSAHLRLDLAKLAAQHITKLEPA 487
Query: 305 NAANYILLSNIYAAAERWIDVSL 327
NA Y++LSN+Y+AA + I+ L
Sbjct: 488 NATPYVVLSNLYSAAGQKIEGDL 510
Score = 104 bits (259), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 83/301 (27%), Positives = 131/301 (43%), Gaps = 65/301 (21%)
Query: 1 MPQRNVASWNAMLCGFVKDGDLSSARGVFDAMPEKNVVSFTTMIDGYA-KAGDMAAARFL 59
M Q+N+ +W AML + K+G + +AR +FD MPE+ ++ MI GY KA A L
Sbjct: 1 MSQKNIVTWTAMLVVYAKNGQIINARKLFDKMPERTTATYNAMISGYILKARKFHLAEEL 60
Query: 60 FEQA--TEKDVVAWSALISGYVQNGQPNQALKVFLEMESKNVKPDEFILVSLMSATSQLG 117
+ + +D V +AL++GY++ G+ N+AL+VF +NV + +VS
Sbjct: 61 YREVPCEFRDPVCSNALMNGYLKIGETNEALRVF-----ENVGESKRDVVS--------- 106
Query: 118 HLELAQWVDSYVSKSSIDLQQDHVIAALLDMNAKCGNMDRALKLFKEMPKRDLVSYCSMI 177
W S + L +D G + A KLF MP+R++VS+ +MI
Sbjct: 107 ------W-----SAVVVGLCRD-------------GRIGYARKLFDRMPERNVVSWSAMI 142
Query: 178 QGLSIHGCGEDAVRLFNSMLMEGLVP-DEVAFTIILTACSHSG----------------- 219
G G E+ F M EG+V + TI++ C + G
Sbjct: 143 DGYMEKGLFENGFGFFLEMRREGVVEVNSTTMTIMIKGCGNCGGVKDGMQIHGLVSRLGF 202
Query: 220 -LVDEGWNYFQSMKQKYGISPSPDHFACMVDLLSRSGHLGDAYELMKSMHEPHAGAWGAL 278
VD + F+ M +K IS + M+ G +G EL ++ E W L
Sbjct: 203 EFVDAAYEVFERMPEKDLIS-----WTAMIRRFVTDGRMGKPVELFDTLKEKDDFVWTVL 257
Query: 279 L 279
+
Sbjct: 258 I 258
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 58/241 (24%), Positives = 121/241 (50%), Gaps = 26/241 (10%)
Query: 4 RNVASWNAMLCGFVKDGDLSSARGVFDAMPE--KNVVSFTTMIDGYAKAGDMAAARFLFE 61
R+ NA++ G++K G+ + A VF+ + E ++VVS++ ++ G + G + AR LF+
Sbjct: 69 RDPVCSNALMNGYLKIGETNEALRVFENVGESKRDVVSWSAVVVGLCRDGRIGYARKLFD 128
Query: 62 QATEKDVVAWSALISGYVQNGQPNQALKVFLEMESKN-VKPDEFILVSLMSATSQLGHLE 120
+ E++VV+WSA+I GY++ G FLEM + V+ + + ++ G ++
Sbjct: 129 RMPERNVVSWSAMIDGYMEKGLFENGFGFFLEMRREGVVEVNSTTMTIMIKGCGNCGGVK 188
Query: 121 LAQWVDSYVSKSSIDLQQDHVIAALLDMNAKCGNMDRALKLFKEMPKRDLVSYCSMIQGL 180
+ VS+ + +D A ++F+ MP++DL+S+ +MI+
Sbjct: 189 DGMQIHGLVSRLGFEF------------------VDAAYEVFERMPEKDLISWTAMIRRF 230
Query: 181 SIHGCGEDAVRLFNSMLMEGLVPDEVAFTIILTACSHSGLVDEGWNYFQSMKQKYGISPS 240
G V LF+++ + D+ +T++++ + +E ++ M ++ G P+
Sbjct: 231 VTDGRMGKPVELFDTLKEK----DDFVWTVLISGFVSNEEYEEALCWYVRMNRE-GCKPN 285
Query: 241 P 241
P
Sbjct: 286 P 286
>Medtr7g108530.1 | PPR containing plant-like protein | HC |
chr7:44212645-44210679 | 20130731
Length = 467
Score = 231 bits (588), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 121/308 (39%), Positives = 190/308 (61%), Gaps = 5/308 (1%)
Query: 42 TMIDGYAKAGDMAAARFLFEQATEKDVVAWSALISGYVQNGQPNQALKVFLEMESKNVKP 101
+++D YA G + R LF++ ++DVV+W+ +I GY G+ N AL VF +M+ V P
Sbjct: 149 SLLDVYASYGCLELCRQLFDEMPQRDVVSWTVMIMGYRNGGKYNDALLVFEQMQYGGVVP 208
Query: 102 DEFILVSLMSATSQLGHLELAQWVDSYVSKSSIDLQQDHVI-AALLDMNAKCGNMDRALK 160
+ +V+ +SA + +E+ W+D V ++ +L D ++ AL+DM KCG ++ LK
Sbjct: 209 NRVTMVNALSACASSCAIEMGVWIDDMVRRNGWEL--DVILGTALIDMYVKCGRVEEGLK 266
Query: 161 LFKEMPKRDLVSYCSMIQGLSIHGCGEDAVRLFNSMLMEGLVPDEVAFTIILTACSHSGL 220
+F +M ++++ + +I+GL++ E+A+ FN M ++G+ DEV +L+ACSHSGL
Sbjct: 267 VFCDMKEKNVFTLNVVIKGLALAKSVEEALLWFNRMELDGVRADEVTLVTVLSACSHSGL 326
Query: 221 VDEGWNYFQSMKQ-KYGISPSPDHFACMVDLLSRSGHLGDAYELMKSM-HEPHAGAWGAL 278
V++G F + KYG P+ H+ACMVDLL+R+G L +A++++K M EP A WG+L
Sbjct: 327 VEKGRFIFSMLVDGKYGFLPNVKHYACMVDLLARAGQLQEAFDIIKCMPFEPTAAMWGSL 386
Query: 279 LGACKLHGDSDLGEIVANQLFELEPQNAANYILLSNIYAAAERWIDVSLVRSRMRERSVQ 338
L K D + E A +L ELEP N A Y+ LSN+YA A RW DV +R M+ER +
Sbjct: 387 LLGSKSRDDLEFSEFAATKLVELEPYNTAYYVQLSNLYAEAGRWSDVERIRGMMKERGLT 446
Query: 339 KIPGCSKL 346
K GCS +
Sbjct: 447 KDLGCSSV 454
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 56/212 (26%), Positives = 99/212 (46%), Gaps = 3/212 (1%)
Query: 59 LFEQATEK-DVVAWSALISGYVQNGQPNQALKVFLEMESKNVKPDEFILVSLMSATSQLG 117
LF K V +++LI + + PN L ++ M ++ P+ F L + S
Sbjct: 64 LFTHLIPKPHVFIFNSLIRAFSHSHIPNTPLSLYSHMHKNSILPNNFTFPFLFKSLSDSH 123
Query: 118 HLELAQWVDSYVSKSSIDLQQDHVIAALLDMNAKCGNMDRALKLFKEMPKRDLVSYCSMI 177
+Q V ++V K + +V +LLD+ A G ++ +LF EMP+RD+VS+ MI
Sbjct: 124 DFVQSQCVYTHVIKLGY-VNDIYVNNSLLDVYASYGCLELCRQLFDEMPQRDVVSWTVMI 182
Query: 178 QGLSIHGCGEDAVRLFNSMLMEGLVPDEVAFTIILTACSHSGLVDEGWNYFQSMKQKYGI 237
G G DA+ +F M G+VP+ V L+AC+ S ++ G + M ++ G
Sbjct: 183 MGYRNGGKYNDALLVFEQMQYGGVVPNRVTMVNALSACASSCAIEMGV-WIDDMVRRNGW 241
Query: 238 SPSPDHFACMVDLLSRSGHLGDAYELMKSMHE 269
++D+ + G + + ++ M E
Sbjct: 242 ELDVILGTALIDMYVKCGRVEEGLKVFCDMKE 273
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 55/206 (26%), Positives = 87/206 (42%), Gaps = 40/206 (19%)
Query: 1 MPQRNVASWNAMLCGFVKDGDLSSARGVFDAMPEKNVV-SFTTMIDGYAKAGDMAAAR-- 57
MPQR+V SW M+ G+ G + A VF+ M VV + TM++ + A
Sbjct: 170 MPQRDVVSWTVMIMGYRNGGKYNDALLVFEQMQYGGVVPNRVTMVNALSACASSCAIEMG 229
Query: 58 -----FLFEQATEKDVVAWSALISGYVQNGQPNQALKVFLEMESKN-------------- 98
+ E DV+ +ALI YV+ G+ + LKVF +M+ KN
Sbjct: 230 VWIDDMVRRNGWELDVILGTALIDMYVKCGRVEEGLKVFCDMKEKNVFTLNVVIKGLALA 289
Query: 99 -----------------VKPDEFILVSLMSATSQLGHLELAQWVDSYVSKSSID-LQQDH 140
V+ DE LV+++SA S G +E +++ S + L
Sbjct: 290 KSVEEALLWFNRMELDGVRADEVTLVTVLSACSHSGLVEKGRFIFSMLVDGKYGFLPNVK 349
Query: 141 VIAALLDMNAKCGNMDRALKLFKEMP 166
A ++D+ A+ G + A + K MP
Sbjct: 350 HYACMVDLLARAGQLQEAFDIIKCMP 375
>Medtr5g027980.1 | pentatricopeptide (PPR) repeat protein | HC |
chr5:11695650-11697815 | 20130731
Length = 446
Score = 231 bits (588), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 118/313 (37%), Positives = 202/313 (64%), Gaps = 3/313 (0%)
Query: 34 EKNVVSFTTMIDGYAKAGDMAAARFLFEQATEKDVVAWSALISGYVQNGQPNQALKVFLE 93
E +V+ ++I+ Y K G++ A +F EK V +WSA+I + N+ L + +
Sbjct: 4 EGDVIVQNSLINMYGKCGEIKNACDVFNGMDEKSVASWSAIIGAHACVEMWNECLMLLGK 63
Query: 94 MESK-NVKPDEFILVSLMSATSQLGHLELAQWVDSYVSKSSIDLQQDHVIAALLDMNAKC 152
M S+ + +E LV+++SA + LG +L + + + ++ +L V +L+DM K
Sbjct: 64 MSSEGRCRVEESTLVNVLSACTHLGSPDLGKCIHGILLRNISELNVV-VKTSLIDMYVKS 122
Query: 153 GNMDRALKLFKEMPKRDLVSYCSMIQGLSIHGCGEDAVRLFNSMLMEGLVPDEVAFTIIL 212
G +++ L++FK M +++ SY MI GL+IHG G++A+++F+ M+ EGL PD+V + +
Sbjct: 123 GCLEKGLRVFKNMSEKNRYSYTVMISGLAIHGRGKEALKVFSEMIEEGLAPDDVVYVGVF 182
Query: 213 TACSHSGLVDEGWNYFQSMKQKYGISPSPDHFACMVDLLSRSGHLGDAYELMKSMH-EPH 271
+ACSH+GLV+EG F+SM+ ++ I P+ H+ CMVDLL R G L +AYEL+KSM +P+
Sbjct: 183 SACSHAGLVEEGLQCFKSMQFEHKIEPTVQHYGCMVDLLGRFGMLKEAYELIKSMSIKPN 242
Query: 272 AGAWGALLGACKLHGDSDLGEIVANQLFELEPQNAANYILLSNIYAAAERWIDVSLVRSR 331
W +LL ACK+H + ++G+I A LF L N+ +Y++L+N+YA A++W DV+ +R++
Sbjct: 243 DVIWRSLLSACKVHHNLEIGKIAAENLFMLNQNNSGDYLVLANMYAKAQKWDDVAKIRTK 302
Query: 332 MRERSVQKIPGCS 344
+ ER++ + PG S
Sbjct: 303 LAERNLVQTPGFS 315
>Medtr6g066360.1 | PPR containing plant-like protein | HC |
chr6:24701161-24699312 | 20130731
Length = 563
Score = 230 bits (587), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 118/389 (30%), Positives = 222/389 (57%), Gaps = 46/389 (11%)
Query: 1 MPQRNVASWNAMLCGFVKDGDLSSARGVFDAMPEKNV----VSFTTMIDG---------- 46
M ++ + SW ++ G+VK G A +F+ M +N+ + F ++ G
Sbjct: 177 MDEKTIVSWTTIMGGYVKVGSSVEAVKLFNEMQHQNIGLDFIVFVNLVSGCIQLREQLLA 236
Query: 47 -------------------------YAKAGDMAAARFLFEQATEKDVVAWSALISGYVQN 81
YA+ G++ +AR +F+ K V++W+++I+GY +
Sbjct: 237 SSVHSLVLKCGCHEEDSIKNLLLTMYARCGNLTSARIIFDLIVRKSVLSWTSMIAGYAHS 296
Query: 82 GQPNQALKVFLEMESKNVKPDEFILVSLMSATSQLGHLELAQWVDSYVSKSSI--DLQQD 139
+P +AL +F M +KP+ L +++SA + LG L + + ++ Y ++ DLQ
Sbjct: 297 RRPKEALDLFRRMVMTEIKPNRATLATVLSACADLGSLCIGEEIEQYAFENGFETDLQ-- 354
Query: 140 HVIAALLDMNAKCGNMDRALKLFKEMPKRDLVSYCSMIQGLSIHGCGEDAVRLFNSMLM- 198
V +L+ M +KCGN+++A ++F+ + +DL + SMI IHG G +A+ LF M
Sbjct: 355 -VQTSLVHMYSKCGNINKAREVFERVENKDLTLWSSMINSYGIHGMGNEAISLFEKMTTA 413
Query: 199 EGLVPDEVAFTIILTACSHSGLVDEGWNYFQSMKQKYGISPSPDHFACMVDLLSRSGHLG 258
E + PD + +T +L ACSHSGL+++G YF+SM+ +GI+P+ +H+ C+VDLL+R G L
Sbjct: 414 ERIKPDAIVYTSLLFACSHSGLIEDGLKYFKSMQTDFGITPTKEHYTCLVDLLARVGQLD 473
Query: 259 DAYELMKSM-HEPHAGAWGALLGACKLHGDSDLGEIVANQLFELEPQNAANYILLSNIYA 317
A + +++M + A A LL AC++HG+ +LGE+VA +L ++ P+++++Y+ ++N+Y
Sbjct: 474 LALDTIEAMPTDVQAEALSPLLSACRIHGNIELGELVAAKLLDVSPKSSSSYVGVANLYN 533
Query: 318 AAERWIDVSLVRSRMRERSVQKIPGCSKL 346
+ +W + + +R+ + + + K G S++
Sbjct: 534 SVGKWKEANTMRNMIDGKGMVKECGWSQV 562
Score = 112 bits (281), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 82/330 (24%), Positives = 148/330 (44%), Gaps = 46/330 (13%)
Query: 1 MPQRNVASWNAMLCGFVKDGDLSSARGVFDAM------------------PEKNVVSFTT 42
MP+R+V SWN+++ + + + A + M N+ SF
Sbjct: 71 MPERSVVSWNSLISAYCHESMMEKALSLIKEMLVLGFKPSSSTFVSILSGYSSNLNSFEF 130
Query: 43 MIDG--------------------------YAKAGDMAAARFLFEQATEKDVVAWSALIS 76
+ G YA+ G M AR +F+ EK +V+W+ ++
Sbjct: 131 LWQGMSMHCFVIKLGLVCFEVSLDNSLMGMYAQFGQMDEARKVFDFMDEKTIVSWTTIMG 190
Query: 77 GYVQNGQPNQALKVFLEMESKNVKPDEFILVSLMSATSQLGHLELAQWVDSYVSKSSIDL 136
GYV+ G +A+K+F EM+ +N+ D + V+L+S QL LA V S V K
Sbjct: 191 GYVKVGSSVEAVKLFNEMQHQNIGLDFIVFVNLVSGCIQLREQLLASSVHSLVLKCGCH- 249
Query: 137 QQDHVIAALLDMNAKCGNMDRALKLFKEMPKRDLVSYCSMIQGLSIHGCGEDAVRLFNSM 196
++D + LL M A+CGN+ A +F + ++ ++S+ SMI G + ++A+ LF M
Sbjct: 250 EEDSIKNLLLTMYARCGNLTSARIIFDLIVRKSVLSWTSMIAGYAHSRRPKEALDLFRRM 309
Query: 197 LMEGLVPDEVAFTIILTACSHSGLVDEGWNYFQSMKQKYGISPSPDHFACMVDLLSRSGH 256
+M + P+ +L+AC+ G + G Q + G +V + S+ G+
Sbjct: 310 VMTEIKPNRATLATVLSACADLGSLCIGEEIEQYAFEN-GFETDLQVQTSLVHMYSKCGN 368
Query: 257 LGDAYELMKSMHEPHAGAWGALLGACKLHG 286
+ A E+ + + W +++ + +HG
Sbjct: 369 INKAREVFERVENKDLTLWSSMINSYGIHG 398
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 53/180 (29%), Positives = 95/180 (52%), Gaps = 6/180 (3%)
Query: 41 TTMIDGYAKAGDMAAARFLFEQATEKDVVAWSALISGYVQNGQPNQALKVFLEMESKNVK 100
T+++D Y+K + +AR +F++ E+ VV+W++LIS Y +AL + EM K
Sbjct: 49 TSLVDMYSKCSVIESARKVFDEMPERSVVSWNSLISAYCHESMMEKALSLIKEMLVLGFK 108
Query: 101 PDEFILVSLMSA-TSQLGHLELAQW----VDSYVSKSSIDLQQDHVIAALLDMNAKCGNM 155
P VS++S +S L E W + +V K + + + +L+ M A+ G M
Sbjct: 109 PSSSTFVSILSGYSSNLNSFEFL-WQGMSMHCFVIKLGLVCFEVSLDNSLMGMYAQFGQM 167
Query: 156 DRALKLFKEMPKRDLVSYCSMIQGLSIHGCGEDAVRLFNSMLMEGLVPDEVAFTIILTAC 215
D A K+F M ++ +VS+ +++ G G +AV+LFN M + + D + F +++ C
Sbjct: 168 DEARKVFDFMDEKTIVSWTTIMGGYVKVGSSVEAVKLFNEMQHQNIGLDFIVFVNLVSGC 227
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 51/192 (26%), Positives = 89/192 (46%), Gaps = 26/192 (13%)
Query: 141 VIAALLDMNAKCGNMDRALKLFKEMPKRDLVSYCSMIQGLSIHGCGEDAVRLFNSMLMEG 200
V +L+DM +KC ++ A K+F EMP+R +VS+ S+I E A+ L ML+ G
Sbjct: 47 VQTSLVDMYSKCSVIESARKVFDEMPERSVVSWNSLISAYCHESMMEKALSLIKEMLVLG 106
Query: 201 LVPDEVAFTIILTACSHSGLVDEGWNYFQSMKQ---------KYGI---SPSPDHFACMV 248
P F IL+ S N F+ + Q K G+ S D+ ++
Sbjct: 107 FKPSSSTFVSILSGYS------SNLNSFEFLWQGMSMHCFVIKLGLVCFEVSLDN--SLM 158
Query: 249 DLLSRSGHLGDAYELMKSMHEPHAGAWGALLGACKLHGDSDLGEIVANQLF-ELEPQNAA 307
+ ++ G + +A ++ M E +W ++G G S + A +LF E++ QN
Sbjct: 159 GMYAQFGQMDEARKVFDFMDEKTIVSWTTIMGGYVKVGSS----VEAVKLFNEMQHQNIG 214
Query: 308 -NYILLSNIYAA 318
++I+ N+ +
Sbjct: 215 LDFIVFVNLVSG 226
>Medtr2g086150.1 | PPR containing plant-like protein | HC |
chr2:36227786-36230819 | 20130731
Length = 867
Score = 230 bits (587), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 134/378 (35%), Positives = 209/378 (55%), Gaps = 38/378 (10%)
Query: 4 RNVASWNAMLCGFVKDGDLSSARGVFDAMPEKNV------------VSF----------- 40
+NV SW AM+ G +++G A +F M + V V +
Sbjct: 360 KNVVSWTAMISGCLQNGGNDQAVNLFSQMRREGVKPNHFTYSAILTVHYPVFVSEMHAEV 419
Query: 41 ------------TTMIDGYAKAGDMAAARFLFEQATEKDVVAWSALISGYVQNGQPNQAL 88
T ++D Y K G+ A +FE KD++AWSA+++GY Q G+ +A
Sbjct: 420 IKTNYERSSSVGTALLDAYVKLGNTIDAVKVFEIIEAKDLMAWSAMLAGYAQTGETEEAA 479
Query: 89 KVFLEMESKNVKPDEFILVSLMSA-TSQLGHLELAQWVDSYVSKSSIDLQQDHVIAALLD 147
K+F ++ + +KP+EF S+++A S E + +Y K ++ V +AL+
Sbjct: 480 KLFHQLIKEGIKPNEFTFSSVINACASPTAAAEQGKQFHAYAIKMRLN-NALCVSSALVT 538
Query: 148 MNAKCGNMDRALKLFKEMPKRDLVSYCSMIQGLSIHGCGEDAVRLFNSMLMEGLVPDEVA 207
M AK GN+D A ++FK +RDLVS+ SMI G S HG + A+ +F+ M + D V
Sbjct: 539 MYAKRGNIDSAHEVFKRQKERDLVSWNSMISGYSQHGQAKKALEVFDEMQKRNMDVDAVT 598
Query: 208 FTIILTACSHSGLVDEGWNYFQSMKQKYGISPSPDHFACMVDLLSRSGHLGDAYELMKSM 267
F ++TAC+H+GLV++G YF SM + I+P+ H++CM+DL SR+G L A ++ M
Sbjct: 599 FIGVITACTHAGLVEKGQKYFNSMINDHHINPTMKHYSCMIDLYSRAGMLEKAMGIINEM 658
Query: 268 -HEPHAGAWGALLGACKLHGDSDLGEIVANQLFELEPQNAANYILLSNIYAAAERWIDVS 326
P A W LLGA ++H + +LGE+ A +L L+P+++A Y+LLSN+YAAA W + +
Sbjct: 659 PFPPGATVWRTLLGAARVHRNVELGELAAEKLISLQPEDSAAYVLLSNMYAAAGNWQERT 718
Query: 327 LVRSRMRERSVQKIPGCS 344
VR M +R V+K PG S
Sbjct: 719 NVRKLMDKRKVKKEPGYS 736
Score = 111 bits (277), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 90/340 (26%), Positives = 156/340 (45%), Gaps = 46/340 (13%)
Query: 1 MPQRNVASWNAMLCGFVKDGDLSSARGVFDAM------PEKNVVS--------------- 39
M +RNV SW ++L G+ +G +F M P + VS
Sbjct: 154 MGERNVVSWTSLLAGYSWNGLYGYVWELFCQMQYEGVLPNRYTVSTVIAALVNEGVVGIG 213
Query: 40 ------------------FTTMIDGYAKAGDMAAARFLFEQATEKDVVAWSALISGYVQN 81
F ++I Y++ G + AR +F++ +D V W+++I+GYV+N
Sbjct: 214 LQVHAMVVKHGFEEAIPVFNSLISLYSRLGMLRDARDVFDKMEIRDWVTWNSMIAGYVRN 273
Query: 82 GQPNQALKVFLEMESKNVKPDEFILVSLMSATSQLGHLELAQWVDSYVSKSSIDLQQDHV 141
GQ + ++F +M+ VKP S++ + + L L L + + KS Q V
Sbjct: 274 GQDLEVFEIFNKMQLAGVKPTHMTFASVIKSCASLRELALVKLMQCKALKSGFTTDQI-V 332
Query: 142 IAALLDMNAKCGNMDRALKLFKEMPK-RDLVSYCSMIQGLSIHGCGEDAVRLFNSMLMEG 200
I AL+ +KC MD AL LF M + +++VS+ +MI G +G + AV LF+ M EG
Sbjct: 333 ITALMVALSKCKEMDDALSLFSLMEEGKNVVSWTAMISGCLQNGGNDQAVNLFSQMRREG 392
Query: 201 LVPDEVAFTIILTACSHSGLVDEGWNYFQSMKQKYGISPSPDHFACMVDLLSRSGHLGDA 260
+ P+ ++ ILT + V E + + +K Y S S ++D + G+ DA
Sbjct: 393 VKPNHFTYSAILTV-HYPVFVSEM--HAEVIKTNYERSSSVG--TALLDAYVKLGNTIDA 447
Query: 261 YELMKSMHEPHAGAWGALLGACKLHGDSDLGEIVANQLFE 300
++ + + AW A+L G+++ + +QL +
Sbjct: 448 VKVFEIIEAKDLMAWSAMLAGYAQTGETEEAAKLFHQLIK 487
Score = 92.8 bits (229), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 62/253 (24%), Positives = 125/253 (49%), Gaps = 9/253 (3%)
Query: 41 TTMIDGYAKAGDMAAARFLFEQATEKDVVAWSALISGYVQNGQPNQALKVFLEMESKNVK 100
T+++D Y K ++ R +F++ E++VV+W++L++GY NG ++F +M+ + V
Sbjct: 132 TSLVDMYMKTENVNDGRRVFDEMGERNVVSWTSLLAGYSWNGLYGYVWELFCQMQYEGVL 191
Query: 101 PDEFILVSLMSATSQLGHLELAQWVDSYVSKSSIDLQQDHVIAALLDMNAKCGNMDRALK 160
P+ + + ++++A G + + V + V K + + V +L+ + ++ G + A
Sbjct: 192 PNRYTVSTVIAALVNEGVVGIGLQVHAMVVKHGFE-EAIPVFNSLISLYSRLGMLRDARD 250
Query: 161 LFKEMPKRDLVSYCSMIQGLSIHGCGEDAVRLFNSMLMEGLVPDEVAFTIILTACS---H 217
+F +M RD V++ SMI G +G + +FN M + G+ P + F ++ +C+
Sbjct: 251 VFDKMEIRDWVTWNSMIAGYVRNGQDLEVFEIFNKMQLAGVKPTHMTFASVIKSCASLRE 310
Query: 218 SGLVDEGWNYFQSMKQKYGISPSPDHFACMVDLLSRSGHLGDAYELMKSMHE-PHAGAWG 276
LV Q K G + ++ LS+ + DA L M E + +W
Sbjct: 311 LALV----KLMQCKALKSGFTTDQIVITALMVALSKCKEMDDALSLFSLMEEGKNVVSWT 366
Query: 277 ALLGACKLHGDSD 289
A++ C +G +D
Sbjct: 367 AMISGCLQNGGND 379
>Medtr8g479320.2 | PPR containing plant-like protein | HC |
chr8:33809079-33805443 | 20130731
Length = 498
Score = 230 bits (587), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 123/307 (40%), Positives = 190/307 (61%), Gaps = 3/307 (0%)
Query: 40 FTTMIDGYAKAGDMAAARFLFEQATEKDVVAWSALISGYVQNGQPNQALKVFLEMESKNV 99
++++D YA G + A LF + +EKD V ++ +ISGY QN ALK+F+EM KN+
Sbjct: 186 ISSLVDCYANWGQIDDAVLLFNETSEKDTVIYNTMISGYCQNLYSEDALKLFVEMREKNM 245
Query: 100 KPDEFILVSLMSATSQLGHLELAQWVDSYVSKSSIDLQQDHVIAALLDMNAKCGNMDRAL 159
P + L S++SA S L L + V S V K + + +V + L+DM +K G++D A
Sbjct: 246 SPTDHTLSSILSACSSLAMLLQGRQVHSLVIKMGSE-RNVYVASTLIDMYSKGGDIDEAQ 304
Query: 160 KLFKEMPKRDLVSYCSMIQGLSIHGCGEDAVRLFNSMLMEG-LVPDEVAFTIILTACSHS 218
+ + K++ V + SMI G + G G +A+ LF+ +L + L+PD V FT +LTAC+H+
Sbjct: 305 CVLDQTSKKNTVLWTSMIMGYAQCGRGLEALELFDYLLTKKELIPDHVCFTAVLTACNHA 364
Query: 219 GLVDEGWNYFQSMKQKYGISPSPDHFACMVDLLSRSGHLGDAYELMKSM-HEPHAGAWGA 277
G +D+G YF M YG+SP D +AC++DL +R+G+L A +LM+ M ++P+ W +
Sbjct: 365 GFIDKGEEYFNKMITNYGLSPDIDIYACLIDLYARNGNLRKARDLMEEMPYDPNCIIWSS 424
Query: 278 LLGACKLHGDSDLGEIVANQLFELEPQNAANYILLSNIYAAAERWIDVSLVRSRMRERSV 337
L ACK++GD +LG A QL ++EP NAA Y+ L++IY W + S VRS M++R
Sbjct: 425 FLSACKIYGDVELGREAAIQLIKMEPCNAAPYLTLAHIYTTKGLWNEASEVRSLMQQRVK 484
Query: 338 QKIPGCS 344
+K PG S
Sbjct: 485 RKPPGWS 491
Score = 106 bits (265), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 71/247 (28%), Positives = 127/247 (51%), Gaps = 3/247 (1%)
Query: 34 EKNVVSFTTMIDGYAKAGDMAAARFLFEQATEKDVVAWSALISGYVQNGQPNQALKVFLE 93
E N+ + ++D YAK + A +F + D V+W++LI+G+ N Q AL +F E
Sbjct: 78 EDNLFLCSALVDFYAKCFAIVDANKIFRAMKQHDQVSWTSLIAGFSANKQGRDALLLFKE 137
Query: 94 MESKNVKPDEFILVSLMSA-TSQLGHLELAQWVDSYVSKSSIDLQQDHVIAALLDMNAKC 152
M ++P+ F L S+++A Q G LE + +V K D VI++L+D A
Sbjct: 138 MLGTQIRPNCFTLTSVINACVGQNGVLEHCPTLHVHVIKQGFD-TSSFVISSLVDCYANW 196
Query: 153 GNMDRALKLFKEMPKRDLVSYCSMIQGLSIHGCGEDAVRLFNSMLMEGLVPDEVAFTIIL 212
G +D A+ LF E ++D V Y +MI G + EDA++LF M + + P + + IL
Sbjct: 197 GQIDDAVLLFNETSEKDTVIYNTMISGYCQNLYSEDALKLFVEMREKNMSPTDHTLSSIL 256
Query: 213 TACSHSGLVDEGWNYFQSMKQKYGISPSPDHFACMVDLLSRSGHLGDAYELMKSMHEPHA 272
+ACS ++ +G S+ K G + + ++D+ S+ G + +A ++ + +
Sbjct: 257 SACSSLAMLLQG-RQVHSLVIKMGSERNVYVASTLIDMYSKGGDIDEAQCVLDQTSKKNT 315
Query: 273 GAWGALL 279
W +++
Sbjct: 316 VLWTSMI 322
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 43/154 (27%), Positives = 88/154 (57%), Gaps = 4/154 (2%)
Query: 34 EKNVVSFTTMIDGYAKAGDMAAARFLFEQATEKDVVAWSALISGYVQNGQPNQALKVF-L 92
E+NV +T+ID Y+K GD+ A+ + +Q ++K+ V W+++I GY Q G+ +AL++F
Sbjct: 281 ERNVYVASTLIDMYSKGGDIDEAQCVLDQTSKKNTVLWTSMIMGYAQCGRGLEALELFDY 340
Query: 93 EMESKNVKPDEFILVSLMSATSQLGHLELA-QWVDSYVSKSSIDLQQDHVIAALLDMNAK 151
+ K + PD ++++A + G ++ ++ + ++ + D + A L+D+ A+
Sbjct: 341 LLTKKELIPDHVCFTAVLTACNHAGFIDKGEEYFNKMITNYGLSPDID-IYACLIDLYAR 399
Query: 152 CGNMDRALKLFKEMP-KRDLVSYCSMIQGLSIHG 184
GN+ +A L +EMP + + + S + I+G
Sbjct: 400 NGNLRKARDLMEEMPYDPNCIIWSSFLSACKIYG 433
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 54/210 (25%), Positives = 95/210 (45%), Gaps = 2/210 (0%)
Query: 75 ISGYVQNGQPNQALKVFLEMESKNVKPDEFILVSLMSATSQLGHLELAQWVDSYVSKSSI 134
I + ++ QAL+ M KP +++L + +S+ ++ + L + +Y+ +S
Sbjct: 18 IRKHSKSASTCQALESLSRMNGLIEKPTKYVLCNALSSCAKTLNWHLGIQIHAYMIRSGY 77
Query: 135 DLQQDHVIAALLDMNAKCGNMDRALKLFKEMPKRDLVSYCSMIQGLSIHGCGEDAVRLFN 194
+ + +AL+D AKC + A K+F+ M + D VS+ S+I G S + G DA+ LF
Sbjct: 78 E-DNLFLCSALVDFYAKCFAIVDANKIFRAMKQHDQVSWTSLIAGFSANKQGRDALLLFK 136
Query: 195 SMLMEGLVPDEVAFTIILTACSHSGLVDEGWNYFQSMKQKYGISPSPDHFACMVDLLSRS 254
ML + P+ T ++ AC V E K G S + +VD +
Sbjct: 137 EMLGTQIRPNCFTLTSVINACVGQNGVLEHCPTLHVHVIKQGFDTSSFVISSLVDCYANW 196
Query: 255 GHLGDAYELMKSMHEPHAGAWGALL-GACK 283
G + DA L E + ++ G C+
Sbjct: 197 GQIDDAVLLFNETSEKDTVIYNTMISGYCQ 226
>Medtr8g479320.1 | PPR containing plant-like protein | HC |
chr8:33809124-33805421 | 20130731
Length = 498
Score = 230 bits (587), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 123/307 (40%), Positives = 190/307 (61%), Gaps = 3/307 (0%)
Query: 40 FTTMIDGYAKAGDMAAARFLFEQATEKDVVAWSALISGYVQNGQPNQALKVFLEMESKNV 99
++++D YA G + A LF + +EKD V ++ +ISGY QN ALK+F+EM KN+
Sbjct: 186 ISSLVDCYANWGQIDDAVLLFNETSEKDTVIYNTMISGYCQNLYSEDALKLFVEMREKNM 245
Query: 100 KPDEFILVSLMSATSQLGHLELAQWVDSYVSKSSIDLQQDHVIAALLDMNAKCGNMDRAL 159
P + L S++SA S L L + V S V K + + +V + L+DM +K G++D A
Sbjct: 246 SPTDHTLSSILSACSSLAMLLQGRQVHSLVIKMGSE-RNVYVASTLIDMYSKGGDIDEAQ 304
Query: 160 KLFKEMPKRDLVSYCSMIQGLSIHGCGEDAVRLFNSMLMEG-LVPDEVAFTIILTACSHS 218
+ + K++ V + SMI G + G G +A+ LF+ +L + L+PD V FT +LTAC+H+
Sbjct: 305 CVLDQTSKKNTVLWTSMIMGYAQCGRGLEALELFDYLLTKKELIPDHVCFTAVLTACNHA 364
Query: 219 GLVDEGWNYFQSMKQKYGISPSPDHFACMVDLLSRSGHLGDAYELMKSM-HEPHAGAWGA 277
G +D+G YF M YG+SP D +AC++DL +R+G+L A +LM+ M ++P+ W +
Sbjct: 365 GFIDKGEEYFNKMITNYGLSPDIDIYACLIDLYARNGNLRKARDLMEEMPYDPNCIIWSS 424
Query: 278 LLGACKLHGDSDLGEIVANQLFELEPQNAANYILLSNIYAAAERWIDVSLVRSRMRERSV 337
L ACK++GD +LG A QL ++EP NAA Y+ L++IY W + S VRS M++R
Sbjct: 425 FLSACKIYGDVELGREAAIQLIKMEPCNAAPYLTLAHIYTTKGLWNEASEVRSLMQQRVK 484
Query: 338 QKIPGCS 344
+K PG S
Sbjct: 485 RKPPGWS 491
Score = 106 bits (265), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 71/247 (28%), Positives = 127/247 (51%), Gaps = 3/247 (1%)
Query: 34 EKNVVSFTTMIDGYAKAGDMAAARFLFEQATEKDVVAWSALISGYVQNGQPNQALKVFLE 93
E N+ + ++D YAK + A +F + D V+W++LI+G+ N Q AL +F E
Sbjct: 78 EDNLFLCSALVDFYAKCFAIVDANKIFRAMKQHDQVSWTSLIAGFSANKQGRDALLLFKE 137
Query: 94 MESKNVKPDEFILVSLMSA-TSQLGHLELAQWVDSYVSKSSIDLQQDHVIAALLDMNAKC 152
M ++P+ F L S+++A Q G LE + +V K D VI++L+D A
Sbjct: 138 MLGTQIRPNCFTLTSVINACVGQNGVLEHCPTLHVHVIKQGFD-TSSFVISSLVDCYANW 196
Query: 153 GNMDRALKLFKEMPKRDLVSYCSMIQGLSIHGCGEDAVRLFNSMLMEGLVPDEVAFTIIL 212
G +D A+ LF E ++D V Y +MI G + EDA++LF M + + P + + IL
Sbjct: 197 GQIDDAVLLFNETSEKDTVIYNTMISGYCQNLYSEDALKLFVEMREKNMSPTDHTLSSIL 256
Query: 213 TACSHSGLVDEGWNYFQSMKQKYGISPSPDHFACMVDLLSRSGHLGDAYELMKSMHEPHA 272
+ACS ++ +G S+ K G + + ++D+ S+ G + +A ++ + +
Sbjct: 257 SACSSLAMLLQG-RQVHSLVIKMGSERNVYVASTLIDMYSKGGDIDEAQCVLDQTSKKNT 315
Query: 273 GAWGALL 279
W +++
Sbjct: 316 VLWTSMI 322
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 43/154 (27%), Positives = 88/154 (57%), Gaps = 4/154 (2%)
Query: 34 EKNVVSFTTMIDGYAKAGDMAAARFLFEQATEKDVVAWSALISGYVQNGQPNQALKVF-L 92
E+NV +T+ID Y+K GD+ A+ + +Q ++K+ V W+++I GY Q G+ +AL++F
Sbjct: 281 ERNVYVASTLIDMYSKGGDIDEAQCVLDQTSKKNTVLWTSMIMGYAQCGRGLEALELFDY 340
Query: 93 EMESKNVKPDEFILVSLMSATSQLGHLELA-QWVDSYVSKSSIDLQQDHVIAALLDMNAK 151
+ K + PD ++++A + G ++ ++ + ++ + D + A L+D+ A+
Sbjct: 341 LLTKKELIPDHVCFTAVLTACNHAGFIDKGEEYFNKMITNYGLSPDID-IYACLIDLYAR 399
Query: 152 CGNMDRALKLFKEMP-KRDLVSYCSMIQGLSIHG 184
GN+ +A L +EMP + + + S + I+G
Sbjct: 400 NGNLRKARDLMEEMPYDPNCIIWSSFLSACKIYG 433
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 54/210 (25%), Positives = 95/210 (45%), Gaps = 2/210 (0%)
Query: 75 ISGYVQNGQPNQALKVFLEMESKNVKPDEFILVSLMSATSQLGHLELAQWVDSYVSKSSI 134
I + ++ QAL+ M KP +++L + +S+ ++ + L + +Y+ +S
Sbjct: 18 IRKHSKSASTCQALESLSRMNGLIEKPTKYVLCNALSSCAKTLNWHLGIQIHAYMIRSGY 77
Query: 135 DLQQDHVIAALLDMNAKCGNMDRALKLFKEMPKRDLVSYCSMIQGLSIHGCGEDAVRLFN 194
+ + +AL+D AKC + A K+F+ M + D VS+ S+I G S + G DA+ LF
Sbjct: 78 E-DNLFLCSALVDFYAKCFAIVDANKIFRAMKQHDQVSWTSLIAGFSANKQGRDALLLFK 136
Query: 195 SMLMEGLVPDEVAFTIILTACSHSGLVDEGWNYFQSMKQKYGISPSPDHFACMVDLLSRS 254
ML + P+ T ++ AC V E K G S + +VD +
Sbjct: 137 EMLGTQIRPNCFTLTSVINACVGQNGVLEHCPTLHVHVIKQGFDTSSFVISSLVDCYANW 196
Query: 255 GHLGDAYELMKSMHEPHAGAWGALL-GACK 283
G + DA L E + ++ G C+
Sbjct: 197 GQIDDAVLLFNETSEKDTVIYNTMISGYCQ 226
>Medtr8g107740.1 | pentatricopeptide (PPR) repeat protein | HC |
chr8:45554142-45556499 | 20130731
Length = 785
Score = 230 bits (586), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 123/333 (36%), Positives = 186/333 (55%), Gaps = 16/333 (4%)
Query: 14 CGFVKDG-DLSSARGVFDAMPEKNVVSFTTMIDGYAKAGDMAAARFLFEQATEKDVVAWS 72
C +K G DL + G ++I YAK G M A ++ KD V++S
Sbjct: 336 CHMIKSGMDLDTTVG-------------NSLISMYAKCGIMDNAVGFLDEMIAKDTVSYS 382
Query: 73 ALISGYVQNGQPNQALKVFLEMESKNVKPDEFILVSLMSATSQLGHLELAQWVDSYVSKS 132
A+ISG VQNG +AL +F +M+S + P +++L+ A S L L+ Y
Sbjct: 383 AIISGCVQNGYAEKALLIFRQMQSSGIAPYLETMIALLPACSHLAALQHGTCCHGYTVVR 442
Query: 133 SIDLQQDHVIAALLDMNAKCGNMDRALKLFKEMPKRDLVSYCSMIQGLSIHGCGEDAVRL 192
+ A++DM +KCG + + ++F M RD++S+ +MI G IHG +A+ L
Sbjct: 443 GFT-NDTSICNAIIDMYSKCGKITISREIFDRMQNRDIISWNTMIIGYGIHGLCVEALSL 501
Query: 193 FNSMLMEGLVPDEVAFTIILTACSHSGLVDEGWNYFQSMKQKYGISPSPDHFACMVDLLS 252
F + GL PD+V +L+ACSHSGLV EG +F SM Q + I P H+ CMVDLL+
Sbjct: 502 FQELQALGLKPDDVTLIAVLSACSHSGLVTEGKYWFSSMSQNFNIKPRMAHYICMVDLLA 561
Query: 253 RSGHLGDAYELMKSM-HEPHAGAWGALLGACKLHGDSDLGEIVANQLFELEPQNAANYIL 311
R+G+L +AY ++ M P+ WGALL AC+ H + ++GE V+ ++ L P+ N++L
Sbjct: 562 RAGNLDEAYTFIQRMPFVPNVRIWGALLAACRTHKNIEMGEQVSKKIQLLGPEGTGNFVL 621
Query: 312 LSNIYAAAERWIDVSLVRSRMRERSVQKIPGCS 344
+SNIY++ RW D + +RS R +K PGCS
Sbjct: 622 MSNIYSSVGRWDDAAYIRSIQRHHGYKKSPGCS 654
Score = 107 bits (266), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 74/257 (28%), Positives = 122/257 (47%), Gaps = 13/257 (5%)
Query: 36 NVVSFTTMIDGYAKAGDMAAARFLFEQATEKDVVAWSALISGYVQNGQPNQALKVFLEME 95
NVV T ++D YAK + AR +F +K+ V WSA+I GYV + + AL ++ +M
Sbjct: 244 NVVLQTALLDMYAKCHLLFYARKIFNTVNKKNDVCWSAMIGGYVLHDSISDALALYDDML 303
Query: 96 S-KNVKPDEFILVSLMSATSQLGHLELAQWVDSYVSKSSIDLQQDHVIAALLDMNAKCGN 154
+ P L +++ A +QL L+ + + ++ KS +DL V +L+ M AKCG
Sbjct: 304 CIYGLNPTPATLATMLRACAQLTDLKRGKKLHCHMIKSGMDLDTT-VGNSLISMYAKCGI 362
Query: 155 MDRALKLFKEMPKRDLVSYCSMIQGLSIHGCGEDAVRLFNSMLMEGLVPDEVAFTIILTA 214
MD A+ EM +D VSY ++I G +G E A+ +F M G+ P +L A
Sbjct: 363 MDNAVGFLDEMIAKDTVSYSAIISGCVQNGYAEKALLIFRQMQSSGIAPYLETMIALLPA 422
Query: 215 CSH-----SGLVDEGWNYFQSMKQKYGISPSPDHFACMVDLLSRSGHLGDAYELMKSMHE 269
CSH G G+ + I + ++D+ S+ G + + E+ M
Sbjct: 423 CSHLAALQHGTCCHGYTVVRGFTNDTSICNA------IIDMYSKCGKITISREIFDRMQN 476
Query: 270 PHAGAWGALLGACKLHG 286
+W ++ +HG
Sbjct: 477 RDIISWNTMIIGYGIHG 493
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 60/241 (24%), Positives = 114/241 (47%), Gaps = 14/241 (5%)
Query: 52 DMAAARFLFEQATEKDVVAWSALISGYVQNGQPNQALKVFLEMESKNVKPDEFILVSLMS 111
++ AR +F+Q + VV W+ +I Y +G Q++ ++L M V P F L+
Sbjct: 56 EIQLARHVFDQIPKPSVVLWNMMIRTYAWSGPFQQSIYLYLHMLQLGVTPTNFTFPFLLK 115
Query: 112 ATSQLGHLELAQWVDS--YVSKSSIDLQQDHVIAALLDMNAKCGNMDRALKLFKEMPK-- 167
A S L L+L + + + ++ S+DL +V ALL M AKCG++ +A LF +
Sbjct: 116 ACSSLQALQLGRLIHTHAHILGLSMDL---YVSTALLHMYAKCGHLYQAQTLFNSISHQD 172
Query: 168 RDLVSYCSMIQGLSIHGCGEDAVRLFNSMLMEGLVPDEVAFTIILTACSHSGLVDEGWNY 227
RD+V++ +MI S H + M G+ P+ IL + + +G
Sbjct: 173 RDIVAWNAMIAAFSFHALHAQTIHSVAQMQQAGVTPNSSTLVSILPTIGQANALHQG--- 229
Query: 228 FQSMKQKYGISPSPDHF---ACMVDLLSRSGHLGDAYELMKSMHEPHAGAWGALLGACKL 284
+++ Y + D+ ++D+ ++ L A ++ ++++ + W A++G L
Sbjct: 230 -KAIHAYYIRNFFFDNVVLQTALLDMYAKCHLLFYARKIFNTVNKKNDVCWSAMIGGYVL 288
Query: 285 H 285
H
Sbjct: 289 H 289
>Medtr4g082470.1 | PPR containing plant-like protein | HC |
chr4:32162319-32165367 | 20130731
Length = 700
Score = 230 bits (586), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 116/304 (38%), Positives = 183/304 (60%), Gaps = 1/304 (0%)
Query: 42 TMIDGYAKAGDMAAARFLFEQATEKDVVAWSALISGYVQNGQPNQALKVFLEMESKNVKP 101
+++D YAK G + A ++F +KDVV+W+++ISGY Q+G +AL +F M ++ P
Sbjct: 381 SLVDMYAKCGLIPDAHYVFATTVDKDVVSWNSVISGYAQSGSAYEALDLFNRMRMESFLP 440
Query: 102 DEFILVSLMSATSQLGHLELAQWVDSYVSKSSIDLQQDHVIAALLDMNAKCGNMDRALKL 161
D +V ++SA + +G ++ + + K + +V ALL+ AKCG+ A +
Sbjct: 441 DAVTVVGVLSACASVGAHQIGLSLHGFALKYGLVSSSIYVGTALLNFYAKCGDATSARMV 500
Query: 162 FKEMPKRDLVSYCSMIQGLSIHGCGEDAVRLFNSMLMEGLVPDEVAFTIILTACSHSGLV 221
F M +++ V++ +MI G + G G ++ LF ML E LVP+EV FT +L ACSHSG+V
Sbjct: 501 FDGMGEKNAVTWAAMIGGCGMQGDGVGSLALFRDMLKEELVPNEVVFTTLLAACSHSGMV 560
Query: 222 DEGWNYFQSMKQKYGISPSPDHFACMVDLLSRSGHLGDAYELMKSMH-EPHAGAWGALLG 280
+EG F M ++ PS H+ACMVDLL+R+G+L +A + + M +P G +GA L
Sbjct: 561 EEGLMIFDFMCKELNFVPSMKHYACMVDLLARAGNLQEALDFIDKMPVQPGVGVFGAFLH 620
Query: 281 ACKLHGDSDLGEIVANQLFELEPQNAANYILLSNIYAAAERWIDVSLVRSRMRERSVQKI 340
C LH + D GE+ ++ EL P A Y+L+SN+YA+ RW V VR +++R + K+
Sbjct: 621 GCGLHSNFDFGEVAIRRMLELHPDQACYYVLISNLYASDGRWGMVKEVREMIKQRGLNKV 680
Query: 341 PGCS 344
PG S
Sbjct: 681 PGVS 684
Score = 129 bits (325), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 90/333 (27%), Positives = 155/333 (46%), Gaps = 49/333 (14%)
Query: 1 MPQRNVASWNAMLCGFVKDGDLSSARGVFDAMPE-------------------------- 34
+P R+V SW +M+ +V++ +F+ M E
Sbjct: 195 IPDRSVVSWTSMIVAYVQNECAEEGLMLFNRMREGFLDGNVFTVGSLVTACTKLGCLHQG 254
Query: 35 --------KNVVSF-----TTMIDGYAKAGDMAAARFLFEQATEK------DVVAWSALI 75
KN + T++++ Y K GD+ AR +F++ + D+V W+A+I
Sbjct: 255 KWVHGYVIKNGIEINSYLATSLLNMYVKCGDIGDARSVFDEFSVSTCGGGDDLVFWTAMI 314
Query: 76 SGYVQNGQPNQALKVFLEMESKNVKPDEFILVSLMSATSQLGHLELAQWVDSYVSKSSID 135
GY Q G P AL++F + + + P+ L SL+SA +QL ++ + + + V K +D
Sbjct: 315 VGYTQRGYPQAALELFTDKKWYRILPNSVTLASLLSACAQLENIVMGKLLHVLVVKYGLD 374
Query: 136 LQQDHVIAALLDMNAKCGNMDRALKLFKEMPKRDLVSYCSMIQGLSIHGCGEDAVRLFNS 195
+ +L+DM AKCG + A +F +D+VS+ S+I G + G +A+ LFN
Sbjct: 375 --DTSLRNSLVDMYAKCGLIPDAHYVFATTVDKDVVSWNSVISGYAQSGSAYEALDLFNR 432
Query: 196 MLMEGLVPDEVAFTIILTACSHSGLVDEGWNYFQSMKQKYGISPSPDHF-ACMVDLLSRS 254
M ME +PD V +L+AC+ G G + KYG+ S + +++ ++
Sbjct: 433 MRMESFLPDAVTVVGVLSACASVGAHQIGLS-LHGFALKYGLVSSSIYVGTALLNFYAKC 491
Query: 255 GHLGDAYELMKSMHEPHAGAWGALLGACKLHGD 287
G A + M E +A W A++G C + GD
Sbjct: 492 GDATSARMVFDGMGEKNAVTWAAMIGGCGMQGD 524
Score = 108 bits (269), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 66/246 (26%), Positives = 129/246 (52%), Gaps = 9/246 (3%)
Query: 40 FTTMIDGYAKAGDMAAARFLFEQATEKDVVAWSALISGYVQNGQPNQALKVFLEMESKNV 99
T+++D Y+K G + AR +F++ ++ VV+W+++I YVQN + L +F M +
Sbjct: 172 LTSLVDAYSKCGKLRDARKVFDEIPDRSVVSWTSMIVAYVQNECAEEGLMLFNRMREGFL 231
Query: 100 KPDEFILVSLMSATSQLGHLELAQWVDSYVSKSSIDLQQDHVIAALLDMNAKCGNMDRAL 159
+ F + SL++A ++LG L +WV YV K+ I++ ++ +LL+M KCG++ A
Sbjct: 232 DGNVFTVGSLVTACTKLGCLHQGKWVHGYVIKNGIEINS-YLATSLLNMYVKCGDIGDAR 290
Query: 160 KLFKEMPKR------DLVSYCSMIQGLSIHGCGEDAVRLFNSMLMEGLVPDEVAFTIILT 213
+F E DLV + +MI G + G + A+ LF ++P+ V +L+
Sbjct: 291 SVFDEFSVSTCGGGDDLVFWTAMIVGYTQRGYPQAALELFTDKKWYRILPNSVTLASLLS 350
Query: 214 ACSHSGLVDEGWNYFQSMKQKYGISPSPDHFACMVDLLSRSGHLGDAYELMKSMHEPHAG 273
AC+ + G + KYG+ + + +VD+ ++ G + DA+ + + +
Sbjct: 351 ACAQLENIVMG-KLLHVLVVKYGLDDTSLRNS-LVDMYAKCGLIPDAHYVFATTVDKDVV 408
Query: 274 AWGALL 279
+W +++
Sbjct: 409 SWNSVI 414
Score = 79.3 bits (194), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 53/208 (25%), Positives = 103/208 (49%), Gaps = 15/208 (7%)
Query: 41 TTMIDGYAKAGDMAAARFLFEQATEKDVVAWSALISGYVQNGQPNQALKVFLEMESKNVK 100
T +++ YAK GD +AR +F+ EK+ V W+A+I G G +L +F +M + +
Sbjct: 482 TALLNFYAKCGDATSARMVFDGMGEKNAVTWAAMIGGCGMQGDGVGSLALFRDMLKEELV 541
Query: 101 PDEFILVSLMSATSQLGHLELAQWVDSYVSKSSIDLQQDHVIAALLDMNAKCGNMDRALK 160
P+E + +L++A S G +E + ++ K + A ++D+ A+ GN+ AL
Sbjct: 542 PNEVVFTTLLAACSHSGMVEEGLMIFDFMCKELNFVPSMKHYACMVDLLARAGNLQEALD 601
Query: 161 LFKEMPKRDLVSYCSMIQGLSIHGCGEDAVRLFNSMLMEGLV---PDEVAFTIILTACSH 217
+MP + V + G +HGCG + F + + ++ PD+ + ++++
Sbjct: 602 FIDKMPVQPGVG----VFGAFLHGCGLHSNFDFGEVAIRRMLELHPDQACYYVLISNLYA 657
Query: 218 S----GLVDEGWNYFQSMKQKYGISPSP 241
S G+V E + M ++ G++ P
Sbjct: 658 SDGRWGMVKE----VREMIKQRGLNKVP 681
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 61/223 (27%), Positives = 105/223 (47%), Gaps = 8/223 (3%)
Query: 41 TTMIDGYAKAGDMAAARFLFEQATEKDVVAWSALISGYVQNGQPNQALKVF-LEMESKNV 99
TT+I YA G + AR LF + ++ +I + N + + + L +
Sbjct: 72 TTLISLYASFGFLRHARTLFHRLPSPTHHSFKLIIRWHFLNDVHSHVVSFYNLARTTLGS 131
Query: 100 KPDEFILVSLMSATSQLGHLELAQWVDSYVSKSSIDLQQDHVIAALLDMNAKCGNMDRAL 159
D + L+ SQL + L + + KS + V+ +L+D +KCG + A
Sbjct: 132 FNDLVVFSILLKTASQLRDIVLTTKLHCNILKS--NAADSFVLTSLVDAYSKCGKLRDAR 189
Query: 160 KLFKEMPKRDLVSYCSMIQGLSIHGCGEDAVRLFNSMLMEGLVPDEVAFTI--ILTACSH 217
K+F E+P R +VS+ SMI + C E+ + LFN M EG + V FT+ ++TAC+
Sbjct: 190 KVFDEIPDRSVVSWTSMIVAYVQNECAEEGLMLFNRM-REGFLDGNV-FTVGSLVTACTK 247
Query: 218 SGLVDEGWNYFQSMKQKYGISPSPDHFACMVDLLSRSGHLGDA 260
G + +G + K GI + ++++ + G +GDA
Sbjct: 248 LGCLHQG-KWVHGYVIKNGIEINSYLATSLLNMYVKCGDIGDA 289
>Medtr8g102760.1 | PPR containing plant-like protein | HC |
chr8:43261430-43259561 | 20130731
Length = 447
Score = 229 bits (585), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 123/304 (40%), Positives = 182/304 (59%), Gaps = 2/304 (0%)
Query: 43 MIDGYAKAGDMAAARFLFEQATEKDVVAWSALISGYVQNGQPNQALKVFLEMESKNVKPD 102
I+ Y KAGD +A +F++ E + +W+ALISG Q G A+ VF++M+ +PD
Sbjct: 138 FINLYCKAGDFDSAHKVFDENHEPKLGSWNALISGLSQGGLAMDAIVVFVDMKRHGFEPD 197
Query: 103 EFILVSLMSATSQLGHLELAQWVDSYVSKSSIDLQQDHVIA-ALLDMNAKCGNMDRALKL 161
+VS+MSA +G L LA + YV ++ + +++ +L+DM KCG MD A ++
Sbjct: 198 GITMVSVMSACGSIGDLYLALQLHKYVFQAKTNEWTVILMSNSLIDMYGKCGRMDLAYEV 257
Query: 162 FKEMPKRDLVSYCSMIQGLSIHGCGEDAVRLFNSMLMEGLVPDEVAFTIILTACSHSGLV 221
F M R++ S+ SMI G ++HG ++A+ F+ M G+ P+ V F +L+AC H G V
Sbjct: 258 FATMEDRNVSSWTSMIVGYAMHGHAKEALGCFHCMRESGVKPNYVTFIGVLSACVHGGTV 317
Query: 222 DEGWNYFQSMKQKYGISPSPDHFACMVDLLSRSGHLGDAYELMKSM-HEPHAGAWGALLG 280
EG YF MK YGI+P H+ CMVDLL R+G DA +++ M +P++ WG L+G
Sbjct: 318 QEGRFYFDMMKNIYGITPQLQHYGCMVDLLGRAGLFDDARRMVEEMPMKPNSVVWGCLMG 377
Query: 281 ACKLHGDSDLGEIVANQLFELEPQNAANYILLSNIYAAAERWIDVSLVRSRMRERSVQKI 340
AC+ HG+ D+ E VA L LEP N Y++LSNIYA W +V +RS M+E + KI
Sbjct: 378 ACEKHGNVDMAEWVAENLQALEPWNEGVYVVLSNIYANKGLWKEVERIRSFMKEGRLAKI 437
Query: 341 PGCS 344
P S
Sbjct: 438 PAYS 441
Score = 92.4 bits (228), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 65/280 (23%), Positives = 126/280 (45%), Gaps = 23/280 (8%)
Query: 26 RGVFDAMPEKNVVS-------FTTMIDGYAKAGDMAA--ARFLFEQATEKDVVA--WSAL 74
R F ++P+ ++ S T++ + D+ A L + E + + W+ +
Sbjct: 9 RRCFCSVPQHSITSGNDPVTVIATLLSNTTRIRDLNQIYAHILLTRFLESNPASFNWNNI 68
Query: 75 ISGYVQNGQPNQALKVFLEMESKNVKPDEFILVSLMSATSQLGHLELAQWVDSYVSKSSI 134
I Y + P AL++++ M V PD + L ++ A SQ ++L Q V SY K +
Sbjct: 69 IRSYTRLESPQNALRIYVSMLRAGVLPDRYTLPIVLKAVSQSFAIQLGQQVHSYGIKLGL 128
Query: 135 DLQQDHVIAALLDMNAKCGNMDRALKLFKEMPKRDLVSYCSMIQGLSIHGCGEDAVRLFN 194
++ + +++ K G+ D A K+F E + L S+ ++I GLS G DA+ +F
Sbjct: 129 Q-SNEYCESGFINLYCKAGDFDSAHKVFDENHEPKLGSWNALISGLSQGGLAMDAIVVFV 187
Query: 195 SMLMEGLVPDEVAFTIILTACSHSGLVDEGWNYFQSMKQKYGISPSPDHFAC------MV 248
M G PD + +++AC G + Y KY + + ++
Sbjct: 188 DMKRHGFEPDGITMVSVMSACGSIGDL-----YLALQLHKYVFQAKTNEWTVILMSNSLI 242
Query: 249 DLLSRSGHLGDAYELMKSMHEPHAGAWGALLGACKLHGDS 288
D+ + G + AYE+ +M + + +W +++ +HG +
Sbjct: 243 DMYGKCGRMDLAYEVFATMEDRNVSSWTSMIVGYAMHGHA 282
Score = 62.0 bits (149), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 49/179 (27%), Positives = 84/179 (46%), Gaps = 11/179 (6%)
Query: 14 CGFVKDGDLSSA----RGVFDAMPEKNVVSF--TTMIDGYAKAGDMAAARFLFEQATEKD 67
CG + GDL A + VF A + V ++ID Y K G M A +F +++
Sbjct: 208 CGSI--GDLYLALQLHKYVFQAKTNEWTVILMSNSLIDMYGKCGRMDLAYEVFATMEDRN 265
Query: 68 VVAWSALISGYVQNGQPNQALKVFLEMESKNVKPDEFILVSLMSATSQLGHLELAQ-WVD 126
V +W+++I GY +G +AL F M VKP+ + ++SA G ++ + + D
Sbjct: 266 VSSWTSMIVGYAMHGHAKEALGCFHCMRESGVKPNYVTFIGVLSACVHGGTVQEGRFYFD 325
Query: 127 SYVSKSSIDLQQDHVIAALLDMNAKCGNMDRALKLFKEMP-KRDLVSYCSMIQGLSIHG 184
+ I Q H ++D+ + G D A ++ +EMP K + V + ++ HG
Sbjct: 326 MMKNIYGITPQLQHY-GCMVDLLGRAGLFDDARRMVEEMPMKPNSVVWGCLMGACEKHG 383
Score = 52.0 bits (123), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 34/134 (25%), Positives = 60/134 (44%), Gaps = 12/134 (8%)
Query: 1 MPQRNVASWNAMLCGFVKDGDLSSARGVFDAMPEK----NVVSFTTMIDGYAKAGDMAAA 56
M RNV+SW +M+ G+ G A G F M E N V+F ++ G +
Sbjct: 261 MEDRNVSSWTSMIVGYAMHGHAKEALGCFHCMRESGVKPNYVTFIGVLSACVHGGTVQEG 320
Query: 57 RFLFEQ-----ATEKDVVAWSALISGYVQNGQPNQALKVFLEMESKNVKPDEFILVSLMS 111
RF F+ + + ++ + G + A ++ EM +KP+ + LM
Sbjct: 321 RFYFDMMKNIYGITPQLQHYGCMVDLLGRAGLFDDARRMVEEMP---MKPNSVVWGCLMG 377
Query: 112 ATSQLGHLELAQWV 125
A + G++++A+WV
Sbjct: 378 ACEKHGNVDMAEWV 391
>Medtr5g043450.1 | PPR containing plant-like protein | HC |
chr5:19108134-19105482 | 20130731
Length = 828
Score = 229 bits (584), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 122/324 (37%), Positives = 191/324 (58%), Gaps = 12/324 (3%)
Query: 26 RGVFDAMPEKNVVSFTTMIDGYAKAGDMAAARFLFEQATEKDVVAWSALISGYVQNGQPN 85
RG FD + +++D Y+K G ++A +F + K +VAW+ +I G+ QNG
Sbjct: 435 RGFFDEFVQN------SLMDMYSKCGFASSAYTIFNKIKHKSIVAWNCMICGFSQNGISV 488
Query: 86 QALKVFLEMESKNVKPDEFILVSLMSATSQLGHLELAQWVDS--YVSKSSIDLQQDHVIA 143
+AL +F EM ++ ++ +S + A S LG+L+ +W+ V+ + DL D
Sbjct: 489 EALSLFDEMFKNRLEINKVTFLSAIQACSNLGYLDKGKWIHHKIIVTGNQNDLYID---T 545
Query: 144 ALLDMNAKCGNMDRALKLFKEMPKRDLVSYCSMIQGLSIHGCGEDAVRLFNSMLMEGLVP 203
AL+DM AKCG++ A K+F + ++ +VS+ +MI IHG A LF+ M++ + P
Sbjct: 546 ALVDMYAKCGDLQTAQKVFDSIVEKSVVSWSTMIAAHGIHGQINAATSLFHKMVLSNIKP 605
Query: 204 DEVAFTIILTACSHSGLVDEGWNYFQSMKQKYGISPSPDHFACMVDLLSRSGHLGDAYEL 263
+EV F IL+AC H+G V EG YF +M+ YGI P+ +HFA +VDLLSR+G + AYE+
Sbjct: 606 NEVTFMNILSACRHAGSVKEGKFYFNTMRDYYGIVPNVEHFASIVDLLSRAGDINGAYEI 665
Query: 264 MKSMHEPHAGA-WGALLGACKLHGDSDLGEIVANQLFELEPQNAANYILLSNIYAAAERW 322
+KS+ P A + WGALL C+++G D+ E +A +L + + Y LLSNIYA W
Sbjct: 666 IKSIRTPVAASIWGALLNGCRIYGRMDMIEYIAEELGGISTDDTGYYTLLSNIYAEGGNW 725
Query: 323 IDVSLVRSRMRERSVQKIPGCSKL 346
+ VRS+M ++K+PG S +
Sbjct: 726 YESRKVRSKMEGMGLKKVPGYSTV 749
Score = 97.8 bits (242), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 63/250 (25%), Positives = 130/250 (52%), Gaps = 3/250 (1%)
Query: 41 TTMIDGYAKAGDMAAARFLFEQATEKDVVAWSALISGYVQNGQPNQALKVFLEMESKNVK 100
T+++ Y + + A+ +F++ +D+V WS++IS YV+NG + L++F M + ++
Sbjct: 141 TSLVGMYGELCFLRDAKKVFDEMCVRDLVLWSSIISCYVENGVYREGLEMFRSMICEGIR 200
Query: 101 PDEFILVSLMSATSQLGHLELAQWVDSYVSKSSIDLQQDHVIAALLDMNAKCGNMDRALK 160
PD +L+S+ A ++G L LA+ V YV + + + + +L+ M ++CG + RA +
Sbjct: 201 PDSVMLLSVAEACGKIGCLRLAKSVHGYVMREGM-VGDGSLSNSLIVMYSQCGYLCRAKR 259
Query: 161 LFKEMPKRDLVSYCSMIQGLSIHGCGEDAVRLFNSMLMEGLVPDEVAFTIILTACSHSGL 220
LF+ + R + SMI + + C E+A+ +F M + P++V +L +C+ G
Sbjct: 260 LFECIDDRSTSCWTSMISAYNQNECFEEALDVFIKMQDSEVEPNDVTMISVLNSCARLGR 319
Query: 221 VDEGWN-YFQSMKQKYGISPSPDHFACMVDLLSRSGHLGDAYELMKSMHEPHAGAWGALL 279
+ EG + + ++ G++ D ++D S + +L+ S+ + +W L+
Sbjct: 320 LKEGKSVHCFVLRNAMGVT-GLDLGPALIDFYSACWKMSSCEKLLHSIGNENIVSWNTLI 378
Query: 280 GACKLHGDSD 289
G +D
Sbjct: 379 SFYAREGLND 388
Score = 89.7 bits (221), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 64/268 (23%), Positives = 132/268 (49%), Gaps = 25/268 (9%)
Query: 15 GFVKDGDLSSARGVFDAMPEKNVVSFTTMIDGYAKAGDMAAARFLFEQATEKDVVAWSAL 74
G V DG LS+ ++I Y++ G + A+ LFE ++ W+++
Sbjct: 233 GMVGDGSLSN-----------------SLIVMYSQCGYLCRAKRLFECIDDRSTSCWTSM 275
Query: 75 ISGYVQNGQPNQALKVFLEMESKNVKPDEFILVSLMSATSQLGHLELAQWVDSYVSKSSI 134
IS Y QN +AL VF++M+ V+P++ ++S++++ ++LG L+ + V +V ++++
Sbjct: 276 ISAYNQNECFEEALDVFIKMQDSEVEPNDVTMISVLNSCARLGRLKEGKSVHCFVLRNAM 335
Query: 135 DLQQDHVIAALLDMNAKCGNMDRALKLFKEMPKRDLVSYCSMIQGLSIHGCGEDAVRLFN 194
+ + AL+D + C M KL + ++VS+ ++I + G ++A+ F
Sbjct: 336 GVTGLDLGPALIDFYSACWKMSSCEKLLHSIGNENIVSWNTLISFYAREGLNDEAMAFFA 395
Query: 195 SMLMEGLVPDEVAFTIILTACSHSGLVDEGWN-YFQSMKQKYGISPSPDHFA--CMVDLL 251
M+ +G++PD + ++A + SG + G + MK+ + D F ++D+
Sbjct: 396 CMVAKGIMPDSFSLASSISASASSGSIQFGQQIHGHVMKRGF-----FDEFVQNSLMDMY 450
Query: 252 SRSGHLGDAYELMKSMHEPHAGAWGALL 279
S+ G AY + + AW ++
Sbjct: 451 SKCGFASSAYTIFNKIKHKSIVAWNCMI 478
>Medtr3g005330.1 | PPR containing plant-like protein | HC |
chr3:156847-154639 | 20130731
Length = 479
Score = 229 bits (584), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 126/320 (39%), Positives = 193/320 (60%), Gaps = 9/320 (2%)
Query: 34 EKNVVSFTTMIDGYAKAGDMAAARFLFEQATEKDVVAWSALISGYVQNGQPNQALKVFLE 93
E + ++I Y D+ A LFE+ + ++V+W+++I +V G+ N+A+ +F +
Sbjct: 142 ENHTYVRNSLIHMYGMLKDIEIAHQLFEEMYQPNLVSWNSIIDCHVYCGKYNEAIDLFTK 201
Query: 94 MESKN-----VKPDEFILVSLMSATSQLGHLELAQWVDSYVSKSSIDLQQD-HVIAALLD 147
M + ++PD LV +SA +G L+ + V S+V + V AL+D
Sbjct: 202 MVQQQHNGMELQPDHATLVVTLSACGAIGSLDFGRKVHSFVRDGVNSFGESISVFNALVD 261
Query: 148 MNAKCGNMDRALKLFKEMPKRDLVSYCSMIQGLSIHGCGEDAVRLFNSMLMEGL-VPDEV 206
M AKCG ++ A + F M ++++VS+ MI G + HG GE+A+ LF ML E + PDE+
Sbjct: 262 MYAKCGAVEEAYETFSNMKRKNVVSWNVMILGFASHGNGEEALALFTRMLHENVERPDEI 321
Query: 207 AFTIILTACSHSGLVDEGWNYFQSMKQKYGISPSPDHFACMVDLLSRSGHLGDAYELMKS 266
F +L ACSH GLVDEG YF+ M + Y I P+ H+ CMVDLL R+G +AYEL+KS
Sbjct: 322 TFLCVLCACSHGGLVDEGRRYFEIMNRDYNIKPTIKHYGCMVDLLGRAGLFVEAYELIKS 381
Query: 267 MH-EPHAGAWGALLGACKLHGDSDLGEIVANQLFELEPQNAANYILLSNIYAAAERWIDV 325
M E +A W LL AC+ +G+ +LGE V L ELEP ++++Y+LL+N+YA+ +W ++
Sbjct: 382 MPVECNAIIWRTLLAACRNYGNVELGEKVRKHLMELEPDHSSDYVLLANMYASTGQWNEM 441
Query: 326 SLVRSRMRERSVQKI-PGCS 344
S R M+ER V+K PG S
Sbjct: 442 SKERRSMQERRVRKPEPGNS 461
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 58/251 (23%), Positives = 118/251 (47%), Gaps = 13/251 (5%)
Query: 48 AKAGDMAAARFLFEQATEKDVVAWSALISGYVQNG-QPNQALKVFLEMESKNVKPDEFIL 106
A + +M A +F++ + D W+ +I G+ + + A+ F M+ + +PD F
Sbjct: 55 AVSQNMNYALNVFDKIPKPDSFLWNTMIRGFGNSTTHSHNAIHFFKRMQLAH-RPDNFTF 113
Query: 107 VSLMSATSQLGHLELAQWVDSYVSKSSIDLQQDHVIAALLDMNAKCGNMDRALKLFKEMP 166
++ ++L + L + + + K + +V +L+ M +++ A +LF+EM
Sbjct: 114 SFILKIIARLRFVNLGKQLHCSLFKFGFE-NHTYVRNSLIHMYGMLKDIEIAHQLFEEMY 172
Query: 167 KRDLVSYCSMIQGLSIHGCGEDAVRLFNSMLMEG-----LVPDEVAFTIILTACSHSGLV 221
+ +LVS+ S+I G +A+ LF M+ + L PD + L+AC G +
Sbjct: 173 QPNLVSWNSIIDCHVYCGKYNEAIDLFTKMVQQQHNGMELQPDHATLVVTLSACGAIGSL 232
Query: 222 DEG---WNYFQSMKQKYGISPSPDHFACMVDLLSRSGHLGDAYELMKSMHEPHAGAWGAL 278
D G ++ + +G S S F +VD+ ++ G + +AYE +M + +W +
Sbjct: 233 DFGRKVHSFVRDGVNSFGESISV--FNALVDMYAKCGAVEEAYETFSNMKRKNVVSWNVM 290
Query: 279 LGACKLHGDSD 289
+ HG+ +
Sbjct: 291 ILGFASHGNGE 301
>Medtr4g113240.1 | pentatricopeptide (PPR) repeat protein | HC |
chr4:46542320-46539266 | 20130731
Length = 1017
Score = 229 bits (583), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 123/303 (40%), Positives = 190/303 (62%), Gaps = 7/303 (2%)
Query: 47 YAKAGDMAAARFLFEQATEK-DVVAWSALISGYVQNGQPNQALKVFLEMESKNVKPDEFI 105
Y K M +F + +E+ D V+W+++ISGY+ +G ++A+ + M + K D F
Sbjct: 587 YGKCEQMEDCEIIFSRMSERRDEVSWNSMISGYLHSGILHKAMDLVWPMMQRGQKLDGFT 646
Query: 106 LVSLMSATSQLGHLELAQWVDSYVSKSSIDLQQDHVI-AALLDMNAKCGNMDRALKLFKE 164
+++SA + + LE V + ++ L+ D V+ +AL+DM AKCG +D A + F+
Sbjct: 647 FATVLSACASVATLERGMEVHACAVRAC--LESDVVVGSALVDMYAKCGKIDYASRFFEL 704
Query: 165 MPKRDLVSYCSMIQGLSIHGCGEDAVRLFNSMLMEGLVPDEVAFTIILTACSHSGLVDEG 224
MP R++ S+ SMI G + HG G+ A+++F M G PD V F +L+ACSH GLVDEG
Sbjct: 705 MPVRNIYSWNSMISGYARHGHGQKALKIFTRMKQHGQSPDHVTFVGVLSACSHVGLVDEG 764
Query: 225 WNYFQSMKQKYGISPSPDHFACMVDLLSRSGHLGDAYELMKSM-HEPHAGAWGALLGA-C 282
+ +F+SM + YG+SP +HF+CMVDLL R+G + + +K+M +P+ W +LGA C
Sbjct: 765 YKHFKSMGEVYGLSPRIEHFSCMVDLLGRAGDVKKIEDFIKTMPMDPNILIWRTVLGACC 824
Query: 283 KLHG-DSDLGEIVANQLFELEPQNAANYILLSNIYAAAERWIDVSLVRSRMRERSVQKIP 341
+ +G +++LG+ A L ELEPQNA NY+LLSN++AA W DV R MR+ +V+K
Sbjct: 825 RANGRNTELGQRAAKMLIELEPQNAVNYVLLSNMHAAGGNWEDVVEARLAMRKAAVKKDA 884
Query: 342 GCS 344
GCS
Sbjct: 885 GCS 887
Score = 96.3 bits (238), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 79/327 (24%), Positives = 145/327 (44%), Gaps = 51/327 (15%)
Query: 4 RNVASWNAMLCGFVKDGDLSSARGVFDAMP-----------EKNVVSFTT---------- 42
RN +WN+++ + + GD SA +F M E + S T
Sbjct: 191 RNSVTWNSIISVYCRRGDAVSAFKLFSVMQMEGVELNLRPNEYTLCSLVTAACSLADCGL 250
Query: 43 ------------------------MIDGYAKAGDMAAARFLFEQATEKDVVAWSALISGY 78
+++G+A+ G M A+ +F+Q +++ V + L+ G
Sbjct: 251 VLLEQMLTRIEKSGFLRDLYVGSALVNGFARYGLMDCAKMIFKQMYDRNAVTMNGLMVGL 310
Query: 79 VQNGQPNQALKVFLEMESKNVKPDEFILVSLMSATSQLGHLE----LAQWVDSYVSKSSI 134
+ Q +A KVF EM+ V+ + LV L+S ++ +L+ Q V +Y+ +S +
Sbjct: 311 ARQHQGEEAAKVFKEMKDL-VEINSESLVVLLSTFTEFSNLKEGKRKGQEVHAYLFRSGL 369
Query: 135 DLQQDHVIAALLDMNAKCGNMDRALKLFKEMPKRDLVSYCSMIQGLSIHGCGEDAVRLFN 194
+ + AL++M KC +D A +F+ MP +D VS+ SMI GL + E+AV F+
Sbjct: 370 VDARISIGNALVNMYGKCTAIDNACSVFQLMPSKDTVSWNSMISGLDHNERFEEAVSCFH 429
Query: 195 SMLMEGLVPDEVAFTIILTACSHSGLVDEGWNYFQSMKQKYGISPSPDHFACMVDLLSRS 254
+M G+VP + L++CS G + G K+G+ ++ L + +
Sbjct: 430 TMKRNGMVPSNFSVISTLSSCSSLGWLTLG-RQIHGEGFKWGLDLDVSVSNALLTLYAET 488
Query: 255 GHLGDAYELMKSMHEPHAGAWGALLGA 281
+ + ++ M E +W + +GA
Sbjct: 489 DSINECQKVFFQMPEYDQVSWNSFIGA 515
Score = 95.5 bits (236), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 80/293 (27%), Positives = 148/293 (50%), Gaps = 18/293 (6%)
Query: 36 NVVSFTTMIDGYAKAGDMAAARFLFEQATEKDVVAWSALISGYVQNGQPNQALKVFLEME 95
+V T+I+ Y + G++ +AR LF++ +K++V+WS LISGY QN P++A +F +
Sbjct: 57 DVFFCNTLINIYVRIGNLVSARKLFDEMPQKNLVSWSCLISGYTQNRMPDEACSLFKGVI 116
Query: 96 SKNVKPDEFILVSLMSATSQLGH--LELAQWVDSYVSKSSIDLQQDHVIA-ALLDMNAKC 152
S + P+ F + S + A Q G ++L + +++ K + D +++ L+ M + C
Sbjct: 117 SSGLLPNHFAVGSALRACQQCGSTGIKLGMQIHAFICK--LPCVSDMILSNVLMSMYSDC 174
Query: 153 -GNMDRALKLFKEMPKRDLVSYCSMIQGLSIHGCGEDAVRLFNSMLMEG----LVPDEVA 207
G++D A ++F E+ R+ V++ S+I G A +LF+ M MEG L P+E
Sbjct: 175 SGSIDDAHRVFDEIKFRNSVTWNSIISVYCRRGDAVSAFKLFSVMQMEGVELNLRPNEYT 234
Query: 208 FTIILT-ACSHSGLVDEGWNYFQSM---KQKYGISPSPDHFACMVDLLSRSGHLGDAYEL 263
++T ACS L D G + M +K G + +V+ +R G + A +
Sbjct: 235 LCSLVTAACS---LADCGLVLLEQMLTRIEKSGFLRDLYVGSALVNGFARYGLMDCAKMI 291
Query: 264 MKSMHEPHAGAW-GALLGACKLHGDSDLGEIVANQLFELEPQNAANYILLSNI 315
K M++ +A G ++G + H + ++ +E + + +LLS
Sbjct: 292 FKQMYDRNAVTMNGLMVGLARQHQGEEAAKVFKEMKDLVEINSESLVVLLSTF 344
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 53/175 (30%), Positives = 90/175 (51%), Gaps = 2/175 (1%)
Query: 43 MIDGYAKAGDMAAARFLFEQATEKDVVAWSALISGYVQNGQPNQALKVFLEMESKNVKPD 102
+++ Y K + A +F+ KD V+W+++ISG N + +A+ F M+ + P
Sbjct: 380 LVNMYGKCTAIDNACSVFQLMPSKDTVSWNSMISGLDHNERFEEAVSCFHTMKRNGMVPS 439
Query: 103 EFILVSLMSATSQLGHLELAQWVDSYVSKSSIDLQQDHVIAALLDMNAKCGNMDRALKLF 162
F ++S +S+ S LG L L + + K +DL V ALL + A+ +++ K+F
Sbjct: 440 NFSVISTLSSCSSLGWLTLGRQIHGEGFKWGLDLDVS-VSNALLTLYAETDSINECQKVF 498
Query: 163 KEMPKRDLVSYCSMIQGLSIHGCGE-DAVRLFNSMLMEGLVPDEVAFTIILTACS 216
+MP+ D VS+ S I L+ + A++ F M+ G P+ V F IL A S
Sbjct: 499 FQMPEYDQVSWNSFIGALAKYEASVLQALKYFLEMMQAGWRPNRVTFINILAAVS 553
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 75/328 (22%), Positives = 130/328 (39%), Gaps = 45/328 (13%)
Query: 1 MPQRNVASWNAMLCGFVKDGDLSSARGVFDAMPEKNVV--SFTTM--------------- 43
MP ++ SWN+M+ G + A F M +V +F+ +
Sbjct: 400 MPSKDTVSWNSMISGLDHNERFEEAVSCFHTMKRNGMVPSNFSVISTLSSCSSLGWLTLG 459
Query: 44 --IDG--------------------YAKAGDMAAARFLFEQATEKDVVAWSALISGYVQ- 80
I G YA+ + + +F Q E D V+W++ I +
Sbjct: 460 RQIHGEGFKWGLDLDVSVSNALLTLYAETDSINECQKVFFQMPEYDQVSWNSFIGALAKY 519
Query: 81 NGQPNQALKVFLEMESKNVKPDEFILVSLMSATSQLGHLELAQWVDSYVSKSSIDLQQDH 140
QALK FLEM +P+ +++++A S L L + + + K S+ D+
Sbjct: 520 EASVLQALKYFLEMMQAGWRPNRVTFINILAAVSSFSVLGLGHQIHALILKYSV--ADDN 577
Query: 141 VIA-ALLDMNAKCGNMDRALKLFKEMP-KRDLVSYCSMIQGLSIHGCGEDAVRLFNSMLM 198
I ALL KC M+ +F M +RD VS+ SMI G G A+ L M+
Sbjct: 578 AIENALLAFYGKCEQMEDCEIIFSRMSERRDEVSWNSMISGYLHSGILHKAMDLVWPMMQ 637
Query: 199 EGLVPDEVAFTIILTACSHSGLVDEGWNYFQSMKQKYGISPSPDHFACMVDLLSRSGHLG 258
G D F +L+AC+ ++ G + + + + +VD+ ++ G +
Sbjct: 638 RGQKLDGFTFATVLSACASVATLERGME-VHACAVRACLESDVVVGSALVDMYAKCGKID 696
Query: 259 DAYELMKSMHEPHAGAWGALLGACKLHG 286
A + M + +W +++ HG
Sbjct: 697 YASRFFELMPVRNIYSWNSMISGYARHG 724
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 49/204 (24%), Positives = 89/204 (43%), Gaps = 41/204 (20%)
Query: 3 QRNVASWNAMLCGFVKDGDLSSA---------------------------------RGV- 28
+R+ SWN+M+ G++ G L A RG+
Sbjct: 606 RRDEVSWNSMISGYLHSGILHKAMDLVWPMMQRGQKLDGFTFATVLSACASVATLERGME 665
Query: 29 -----FDAMPEKNVVSFTTMIDGYAKAGDMAAARFLFEQATEKDVVAWSALISGYVQNGQ 83
A E +VV + ++D YAK G + A FE +++ +W+++ISGY ++G
Sbjct: 666 VHACAVRACLESDVVVGSALVDMYAKCGKIDYASRFFELMPVRNIYSWNSMISGYARHGH 725
Query: 84 PNQALKVFLEMESKNVKPDEFILVSLMSATSQLGHL-ELAQWVDSYVSKSSIDLQQDHVI 142
+ALK+F M+ PD V ++SA S +G + E + S + + +H
Sbjct: 726 GQKALKIFTRMKQHGQSPDHVTFVGVLSACSHVGLVDEGYKHFKSMGEVYGLSPRIEH-F 784
Query: 143 AALLDMNAKCGNMDRALKLFKEMP 166
+ ++D+ + G++ + K MP
Sbjct: 785 SCMVDLLGRAGDVKKIEDFIKTMP 808
>Medtr1g085700.1 | pentatricopeptide (PPR) repeat protein, putative
| HC | chr1:38304139-38306748 | 20130731
Length = 739
Score = 229 bits (583), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 111/311 (35%), Positives = 188/311 (60%), Gaps = 3/311 (0%)
Query: 36 NVVSFTTMIDGYAKAGDMAAARFLFEQATEKDVVAWSALISGYVQNGQPNQALKVFLEME 95
+VV + ++D YA G + A +F + D++ W++LI+GY G A F E+
Sbjct: 373 DVVVGSALVDMYANCGSIKEAESIFRNMLDMDIMVWNSLIAGYNLVGDFQSAFFTFREIW 432
Query: 96 SKNVKPDEFILVSLMSATSQLGHLELAQWVDSYVSKSSIDLQQDHVIAALLDMNAKCGNM 155
+P+ LVS++ +Q+G L + + Y ++S + L V +L+DM +KCG +
Sbjct: 433 VAEHRPNHITLVSVLPICTQIGALRQGKEIHCYATRSGLGLNIS-VGNSLIDMYSKCGFL 491
Query: 156 DRALKLFKEMPKRDLVSYCSMIQGLSIHGCGEDAVRLFNSMLMEGLVPDEVAFTIILTAC 215
+ +K+F +M ++ ++Y +MI HG GE ++ + M G+ P++V F +L+AC
Sbjct: 492 ELGVKVFNQMMVKNTITYNTMISACGAHGLGEKGLKFYEQMNEAGMKPNKVTFISLLSAC 551
Query: 216 SHSGLVDEGWNYFQSMKQKYGISPSPDHFACMVDLLSRSGHLGDAYELMKSMH-EPHAGA 274
SH+GLVD GW + SM YGI P +H++CMVDL+ R+G L AY+ + +M P A
Sbjct: 552 SHAGLVDRGWLLYNSMVNDYGIKPDMEHYSCMVDLIGRTGDLDGAYKFITTMPVTPDANV 611
Query: 275 WGALLGACKLHGDSDLG-EIVANQLFELEPQNAANYILLSNIYAAAERWIDVSLVRSRMR 333
G+LLGAC+LH +L ++ A +F+L +++ +Y+LLSN+YA+ +RW D+S VRS ++
Sbjct: 612 LGSLLGACRLHNKVELADQLTAEHIFQLNTEDSGHYVLLSNLYASGKRWEDMSKVRSLIK 671
Query: 334 ERSVQKIPGCS 344
++ ++K PG S
Sbjct: 672 DKGLEKKPGSS 682
Score = 99.8 bits (247), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 67/246 (27%), Positives = 124/246 (50%), Gaps = 3/246 (1%)
Query: 43 MIDGYAKAGDMAAARFLFEQATEKDVVAWSALISGYVQNGQPNQALKVFLEMESKNVKPD 102
+ID + K + AR +F++ +D+ W+ALI G V NG+ ++A+ +F +M + +K D
Sbjct: 177 LIDMFVKCESLEDARKVFDEMNVRDLATWTALICGNVWNGEWDEAVLLFRKMRLEGLKAD 236
Query: 103 EFILVSLMSATSQLGH-LELAQWVDSYVSKSSIDLQQDHVIAALLDMNAKCGNMDRALKL 161
I+ S++ +L L+L + +S D +V A++DM KCG D A +
Sbjct: 237 SVIVASVLPVCGRLMEGLKLGMAMHGCALRSGFD-SDLYVSNAIIDMYCKCGYPDEACLV 295
Query: 162 FKEMPKRDLVSYCSMIQGLSIHGCGEDAVRLFNSMLMEGLVPDEVAFTIILTACSHSGLV 221
F M RD+VS+ ++I G S +G +++ L+ M+ GL +E+ + +L A L
Sbjct: 296 FSYMVFRDIVSWSTLIAGYSQNGMYKESFELYVRMVNMGLTTNEIVVSTVLPALGKLKLF 355
Query: 222 DEGWNYFQSMKQKYGISPSPDHFACMVDLLSRSGHLGDAYELMKSMHEPHAGAWGALLGA 281
+G + K G+ + +VD+ + G + +A + ++M + W +L+
Sbjct: 356 KQG-KEMHNFVLKQGLLTDVVVGSALVDMYANCGSIKEAESIFRNMLDMDIMVWNSLIAG 414
Query: 282 CKLHGD 287
L GD
Sbjct: 415 YNLVGD 420
Score = 81.6 bits (200), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 49/175 (28%), Positives = 87/175 (49%), Gaps = 5/175 (2%)
Query: 43 MIDGYAKAGDMAAARFLFEQATEKDVVAWSALISGYVQNGQPNQALKVFLEMESKNVKPD 102
+++ Y G A F Q K +AW+A++ + + +++ + M PD
Sbjct: 76 LVNAYVNFGSHHYAFLFFSQLPHKSNLAWNAILRALIGSNNFTLSIQFYHSMLRHGFAPD 135
Query: 103 EFILVSLMSATSQLGHLELAQWV--DSYVSKSSIDLQQDHVIAALLDMNAKCGNMDRALK 160
+ ++ A S L +E+ +WV + +++ +L V AL+DM KC +++ A K
Sbjct: 136 NYTYPLVLKACSSLQAIEIGRWVYHNILINEEKANL---FVQCALIDMFVKCESLEDARK 192
Query: 161 LFKEMPKRDLVSYCSMIQGLSIHGCGEDAVRLFNSMLMEGLVPDEVAFTIILTAC 215
+F EM RDL ++ ++I G +G ++AV LF M +EGL D V +L C
Sbjct: 193 VFDEMNVRDLATWTALICGNVWNGEWDEAVLLFRKMRLEGLKADSVIVASVLPVC 247
>Medtr3g011920.1 | PPR containing plant-like protein | HC |
chr3:3106602-3104668 | 20130731
Length = 627
Score = 229 bits (583), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 119/341 (34%), Positives = 206/341 (60%), Gaps = 2/341 (0%)
Query: 5 NVASWNAMLCGFVKDGDLSSARGVFDAMPEKNVVSFTTMIDGYAKAGDMAAARFLFEQAT 64
NV +A++ +VK + A+ F+ NVVS+TT+I GY K+G A +F +
Sbjct: 194 NVFVGSALVDLYVKLSSIEEAQKAFEDTEYPNVVSYTTLIGGYLKSGRFEDALRVFNEMP 253
Query: 65 EKDVVAWSALISGYVQNGQPNQALKVFLEMESKNVKPDEFILVSLMSATSQLGHLELAQW 124
E++V++W+A++ G + G +A+K F++M + P+E +SA S + L +
Sbjct: 254 ERNVISWNAMVGGCSKIGHNEEAVKFFIDMLREGFIPNESTFPCAISAASNIASLGFGRS 313
Query: 125 VDSYVSKSSIDLQQDHVIAALLDMNAKCGNMDRALKLFKEMPKRDLVSYCSMIQGLSIHG 184
+ K L D V +L+ AKCG+M +L +F ++ KR++VS+ ++I G + +G
Sbjct: 314 FHACAIKFLGKLN-DFVGNSLISFYAKCGSMKDSLLIFDKICKRNVVSWNAVICGYAHNG 372
Query: 185 CGEDAVRLFNSMLMEGLVPDEVAFTIILTACSHSGLVDEGWNYFQSMKQKYGISPSPDHF 244
G +A+ LF M EG+ P++V+ +L AC+H+GLVDEG+ YF + + P+H+
Sbjct: 373 RGAEAISLFERMCSEGIKPNKVSLLGLLLACNHAGLVDEGFLYFNKARIESPNLLKPEHY 432
Query: 245 ACMVDLLSRSGHLGDAYELMKSM-HEPHAGAWGALLGACKLHGDSDLGEIVANQLFELEP 303
ACMVDLL+RSG +A ++ M P G W A+LG C++H + +LGE+ A + L+P
Sbjct: 433 ACMVDLLARSGRFTEAQNFIRRMPFNPGIGFWKAILGGCQIHHNIELGELAAKNILALDP 492
Query: 304 QNAANYILLSNIYAAAERWIDVSLVRSRMRERSVQKIPGCS 344
+ ++Y+++SN ++AA RW DV+ +R+ ++E+ +++IPG S
Sbjct: 493 DDVSSYVMMSNAHSAAGRWSDVARLRTEIQEKGMKRIPGSS 533
Score = 75.9 bits (185), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 46/176 (26%), Positives = 90/176 (51%), Gaps = 30/176 (17%)
Query: 72 SALISGYVQNGQPNQALKVFLEMESKNVKPDEFILVSLMSATSQLGHLELAQ-------- 123
+ +I+ + + + A+ +F M + ++P+EF ++++ +++LG + + +
Sbjct: 129 TEIITSFSKQSRHEDAIYLFSRMLASTIRPNEFTFGTVLNTSTRLGKVGVGKQIHGCAIK 188
Query: 124 ------------WVDSYVSKSSI--------DLQQDHVIA--ALLDMNAKCGNMDRALKL 161
VD YV SSI D + +V++ L+ K G + AL++
Sbjct: 189 TSLCSNVFVGSALVDLYVKLSSIEEAQKAFEDTEYPNVVSYTTLIGGYLKSGRFEDALRV 248
Query: 162 FKEMPKRDLVSYCSMIQGLSIHGCGEDAVRLFNSMLMEGLVPDEVAFTIILTACSH 217
F EMP+R+++S+ +M+ G S G E+AV+ F ML EG +P+E F ++A S+
Sbjct: 249 FNEMPERNVISWNAMVGGCSKIGHNEEAVKFFIDMLREGFIPNESTFPCAISAASN 304
>Medtr1g067280.1 | PPR containing plant-like protein | HC |
chr1:28986458-28983697 | 20130731
Length = 684
Score = 228 bits (582), Expect = 5e-60, Method: Compositional matrix adjust.
Identities = 125/338 (36%), Positives = 193/338 (57%), Gaps = 4/338 (1%)
Query: 10 NAMLCGFVKDGDLSSARGVFDAMPEKNVVSFTTMIDGYAKAGDMAAARFLFEQATEKDVV 69
NA++ + K G L+ AR +FD M EK+ VS+ ++I GY G + A + + +
Sbjct: 298 NAIIAMYAKCGSLNYARELFDEMGEKDEVSYRSIISGYMINGFVDEALDVLKGIENPGLS 357
Query: 70 AWSALISGYVQNGQPNQALKVFLEMES--KNVKPDEFILVSLMSATSQLGHLELAQWVDS 127
W+ +I G VQN Q +AL + EM N+KP+ L S++ S +L + V
Sbjct: 358 TWNDVIPGMVQNNQFERALDLVREMPGFGLNLKPNVVTLSSIIPLFSYFSNLRGLKEVHG 417
Query: 128 YVSKSSIDLQQDHVIAALLDMNAKCGNMDRALKLFKEMPKRDLVSYCSMIQGLSIHGCGE 187
Y + S D Q +V A++D AK G + A ++F + R L+ + S+I + HG
Sbjct: 418 YAIRRSYD-QNIYVATAIVDSYAKLGFIHLARRVFDQSQSRSLIIWTSIIYAYASHGDAS 476
Query: 188 DAVRLFNSMLMEGLVPDEVAFTIILTACSHSGLVDEGWNYFQSMKQKYGISPSPDHFACM 247
A+ L+N ML G+ PD V T +LTAC+HSGLV+E W+ F +M K+GI P +H+ACM
Sbjct: 477 LALGLYNQMLDRGIQPDPVTLTSVLTACAHSGLVNEAWDVFNAMPSKHGIQPVVEHYACM 536
Query: 248 VDLLSRSGHLGDAYELMKSM-HEPHAGAWGALLGACKLHGDSDLGEIVANQLFELEPQNA 306
V +LSR+G L +A + + M EP A WGALL ++ D ++G+ + LFE+EP++
Sbjct: 537 VGVLSRAGKLSEAEKFISKMPFEPTAKVWGALLNGASIYDDVEIGKFACDHLFEIEPEHT 596
Query: 307 ANYILLSNIYAAAERWIDVSLVRSRMRERSVQKIPGCS 344
NYI+++N+Y+ A RW + +R RM + KI G S
Sbjct: 597 GNYIIMANLYSRAGRWEEARKIRERMEKTGSPKIRGSS 634
Score = 93.2 bits (230), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 53/169 (31%), Positives = 93/169 (55%), Gaps = 4/169 (2%)
Query: 36 NVVSFTTMIDGYAKAGDMAAARFLFEQATEKDVVAWSALISGYVQNGQPNQALKVFLEM- 94
+V ++ Y + G + AR +F++ TE+D+V W+A+I GY Q+G + +++LEM
Sbjct: 189 DVCVLNALVTCYCRCGRIEIARKVFDEMTERDIVTWNAMIGGYSQSGFYEECKRLYLEML 248
Query: 95 --ESKNVKPDEFILVSLMSATSQLGHLELAQWVDSYVSKSSIDLQQDHVIAALLDMNAKC 152
E K + P+ + S+M A Q L V ++ I+ + A++ M AKC
Sbjct: 249 GLEGKGILPNAVTIGSVMQACGQSKDLSFGMEVHRFMKDDGIETDV-FLCNAIIAMYAKC 307
Query: 153 GNMDRALKLFKEMPKRDLVSYCSMIQGLSIHGCGEDAVRLFNSMLMEGL 201
G+++ A +LF EM ++D VSY S+I G I+G ++A+ + + GL
Sbjct: 308 GSLNYARELFDEMGEKDEVSYRSIISGYMINGFVDEALDVLKGIENPGL 356
Score = 91.7 bits (226), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 76/283 (26%), Positives = 132/283 (46%), Gaps = 13/283 (4%)
Query: 16 FVKDGDLSSARGVFDAMPEKNVVSFTTMIDGYAKAGDMAAARFLFEQATEKDVVAWSALI 75
++ G AR A+ N ++ T +I YAK+ + AR +F++ K+ +W+++I
Sbjct: 64 LIRQGKQLHARFFPFAITPDNFIA-TKLITFYAKSNLIRNARNVFDKIPHKNSFSWNSMI 122
Query: 76 SGYVQNGQPNQALKVFLEMES---KNVKPDEFILVSLMSATSQLGHLELAQWVDSYVSKS 132
Y N AL +F S NV PD F + S++ + + + S
Sbjct: 123 IAYTSKSLFNDALSLFASFVSSTDNNVSPDNFTMTSILKTLALSSSVCYKSAKQIHCSAL 182
Query: 133 SIDLQQD-HVIAALLDMNAKCGNMDRALKLFKEMPKRDLVSYCSMIQGLSIHGCGEDAVR 191
D V+ AL+ +CG ++ A K+F EM +RD+V++ +MI G S G E+ R
Sbjct: 183 LRGFYSDVCVLNALVTCYCRCGRIEIARKVFDEMTERDIVTWNAMIGGYSQSGFYEECKR 242
Query: 192 LFNSML---MEGLVPDEVAFTIILTACSHSGLVDEGWNYFQSMKQKYGISPSPDHFAC-- 246
L+ ML +G++P+ V ++ AC S + G + MK GI D F C
Sbjct: 243 LYLEMLGLEGKGILPNAVTIGSVMQACGQSKDLSFGMEVHRFMKDD-GI--ETDVFLCNA 299
Query: 247 MVDLLSRSGHLGDAYELMKSMHEPHAGAWGALLGACKLHGDSD 289
++ + ++ G L A EL M E ++ +++ ++G D
Sbjct: 300 IIAMYAKCGSLNYARELFDEMGEKDEVSYRSIISGYMINGFVD 342
>Medtr3g045450.1 | pentatricopeptide (PPR) repeat protein | HC |
chr3:14788174-14785760 | 20130731
Length = 804
Score = 228 bits (581), Expect = 6e-60, Method: Compositional matrix adjust.
Identities = 133/387 (34%), Positives = 210/387 (54%), Gaps = 48/387 (12%)
Query: 1 MPQRNVASWNAMLCGFVKDGDLSSARGVFDAM----PEKNVVSFTTMI------------ 44
M RN+ SWN+M+ F ++ +A + M N V+FT ++
Sbjct: 399 MGDRNIVSWNSMVANFAQNRHHFAAVELLRQMQAHGENPNNVTFTNVLPACARLGFLNVG 458
Query: 45 -----------------------DGYAKAGDMAAARFLFEQATEKDVVAWSALISGYVQN 81
D Y+K G ++ AR +F + KD V+++ LI GY Q
Sbjct: 459 KEIHARIIQTGCATDLFLSNALTDMYSKCGHLSLARNVF-NVSIKDKVSYNILIIGYSQT 517
Query: 82 GQPNQALKVFLEMESKNVKPDEFILVSLMSATSQLGHLELAQWVDSYVSKSSIDLQQDHV 141
+++L +F EM + PD + ++SA + L ++ + + ++ + L H+
Sbjct: 518 TNSSESLNLFSEMRLSGMTPDIVSFIGIISACAHLSSIKQGKEIHGHLVRK---LFHTHL 574
Query: 142 IAA--LLDMNAKCGNMDRALKLFKEMPKRDLVSYCSMIQGLSIHGCGEDAVRLFNSMLME 199
AA LLD+ KCG +D A K+F + +D+ S+ +MI G + G E A+ LF +M +
Sbjct: 575 FAANSLLDLYTKCGRIDLATKVFDRIQHKDVASWNTMILGYGMRGEFETAINLFEAMKED 634
Query: 200 GLVP-DEVAFTIILTACSHSGLVDEGWNYFQSMKQKYGISPSPDHFACMVDLLSRSGHLG 258
G V D V++ +L+ACSH GL+++G YF+ M Q Y I P+ H+ACMVDLL R+G +
Sbjct: 635 GGVEYDSVSYIAVLSACSHGGLIEKGNKYFKQM-QDYNIEPTHTHYACMVDLLGRAGQIE 693
Query: 259 DAYELMKSM-HEPHAGAWGALLGACKLHGDSDLGEIVANQLFELEPQNAANYILLSNIYA 317
+A L++ + EP A WGALLGAC+++G+ +LG A LF+L+P + YILLSN+YA
Sbjct: 694 EAANLIRGLSFEPDANIWGALLGACRIYGNVELGHWAAEHLFKLKPDHCGYYILLSNMYA 753
Query: 318 AAERWIDVSLVRSRMRERSVQKIPGCS 344
A RW + ++VR M+ R +K PGCS
Sbjct: 754 EAGRWDEANMVRELMKSRGAKKNPGCS 780
Score = 100 bits (248), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 78/343 (22%), Positives = 157/343 (45%), Gaps = 54/343 (15%)
Query: 1 MPQRNVASWNAMLCGFVKDG----DLSSARGVFDAMPEKNVVSFTTM------------- 43
M +RN SWNA++ GF G L + R + + N V+ ++M
Sbjct: 298 MDERNEVSWNAVITGFSFRGLSMDALDAFRSMINTGMRPNPVTISSMLPVLGELGLFKLG 357
Query: 44 ----------------------IDGYAKAGDMAAARFLFEQATEKDVVAWSALISGYVQN 81
ID YAK+G A +F + ++++V+W+++++ + QN
Sbjct: 358 MEVHGYSLRMGIESDIFIGNSLIDMYAKSGSSRVASTIFNKMGDRNIVSWNSMVANFAQN 417
Query: 82 GQPNQALKVFLEMESKNVKPDEFILVSLMSATSQLGHLELAQWVDSYVSKS--SIDLQQD 139
A+++ +M++ P+ +++ A ++LG L + + + + + ++ + DL
Sbjct: 418 RHHFAAVELLRQMQAHGENPNNVTFTNVLPACARLGFLNVGKEIHARIIQTGCATDLFLS 477
Query: 140 HVIAALLDMNAKCGNMDRALKLFKEMPKRDLVSYCSMIQGLSIHGCGEDAVRLFNSMLME 199
+ AL DM +KCG++ A +F + +D VSY +I G S +++ LF+ M +
Sbjct: 478 N---ALTDMYSKCGHLSLARNVFN-VSIKDKVSYNILIIGYSQTTNSSESLNLFSEMRLS 533
Query: 200 GLVPDEVAFTIILTACSHSGLVDEGWNYFQSMKQKYGISPSPDHFAC--MVDLLSRSGHL 257
G+ PD V+F I++AC+H + +G + +K FA ++DL ++ G +
Sbjct: 534 GMTPDIVSFIGIISACAHLSSIKQGKEIHGHLVRKL---FHTHLFAANSLLDLYTKCGRI 590
Query: 258 GDAYELMKSMHEPHAGAWGALLGACKLHGDSDLGEIVANQLFE 300
A ++ + +W ++ + G+ + A LFE
Sbjct: 591 DLATKVFDRIQHKDVASWNTMILGYGMRGEFE----TAINLFE 629
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 67/254 (26%), Positives = 120/254 (47%), Gaps = 4/254 (1%)
Query: 28 VFDAMPEKNVVSFTTMIDGYAKAGDMAAARFLFEQATEKDVVAWSALISGYVQNGQPNQA 87
VF +K+V T++ Y G A +F++ E+D V+W+ +I G ++
Sbjct: 160 VFKVGFDKDVFVGNTLLMFYGNCGFFVDAMNVFDEMFERDKVSWNTVIGLCSDRGFHEES 219
Query: 88 LKVFLEM--ESKNVKPDEFILVSLMSATSQLGHLELAQWVDSYVSKSSIDLQQDHVIAAL 145
L F EM + V+PD +VS++ + ++ +A+ V YV K + V AL
Sbjct: 220 LCFFKEMVVAAPVVRPDLVTVVSVLPVCADSENVVMARIVHGYVFKVGLS-GHVKVGNAL 278
Query: 146 LDMNAKCGNMDRALKLFKEMPKRDLVSYCSMIQGLSIHGCGEDAVRLFNSMLMEGLVPDE 205
+D+ KCG+ + K+F EM +R+ VS+ ++I G S G DA+ F SM+ G+ P+
Sbjct: 279 VDVYGKCGSEEACKKVFDEMDERNEVSWNAVITGFSFRGLSMDALDAFRSMINTGMRPNP 338
Query: 206 VAFTIILTACSHSGLVDEGWNYFQSMKQKYGISPSPDHFACMVDLLSRSGHLGDAYELMK 265
V + +L GL G + GI ++D+ ++SG A +
Sbjct: 339 VTISSMLPVLGELGLFKLGME-VHGYSLRMGIESDIFIGNSLIDMYAKSGSSRVASTIFN 397
Query: 266 SMHEPHAGAWGALL 279
M + + +W +++
Sbjct: 398 KMGDRNIVSWNSMV 411
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 48/198 (24%), Positives = 91/198 (45%), Gaps = 21/198 (10%)
Query: 1 MPQRNVASWNAMLCGFVKDGDLSSARGVFDAMPEK-----NVVSFTTMIDGYAKAGDMAA 55
+ ++VASWN M+ G+ G+ +A +F+AM E + VS+ ++ + G +
Sbjct: 600 IQHKDVASWNTMILGYGMRGEFETAINLFEAMKEDGGVEYDSVSYIAVLSACSHGGLIEK 659
Query: 56 ARFLFEQATEKDV----VAWSALISGYVQNGQPNQALKVFLEMESKNVKPDEFILVSLMS 111
F+Q + ++ ++ ++ + GQ +A + + + +PD I +L+
Sbjct: 660 GNKYFKQMQDYNIEPTHTHYACMVDLLGRAGQIEEAANL---IRGLSFEPDANIWGALLG 716
Query: 112 ATSQLGHLELAQWVDSYVSKSSIDLQQDHVIAALL--DMNAKCGNMDRALKLFKEMPKRD 169
A G++EL W ++ K L+ DH +L +M A+ G D A + + M R
Sbjct: 717 ACRIYGNVELGHWAAEHLFK----LKPDHCGYYILLSNMYAEAGRWDEANMVRELMKSRG 772
Query: 170 LVSY--CSMIQ-GLSIHG 184
CS +Q G +HG
Sbjct: 773 AKKNPGCSWVQIGDQVHG 790
>Medtr4g015760.2 | PPR containing plant-like protein | HC |
chr4:4766254-4759488 | 20130731
Length = 673
Score = 227 bits (579), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 121/306 (39%), Positives = 185/306 (60%), Gaps = 3/306 (0%)
Query: 41 TTMIDGYAKAGDMAAARFLFEQATEKDVVAWSALISGYVQNGQPNQALKVFLEMESKNVK 100
T ++D Y K A LF + +KDV+AW+ L SGY NG ++++ VF M S +
Sbjct: 319 TALMDMYMKCFSPEKAVDLFNRMPKKDVIAWAVLFSGYADNGMVHESMWVFRNMLSSGTR 378
Query: 101 PDEFILVSLMSATSQLGHLELAQWVDSYVSKSSIDLQQDHVIAALLDMNAKCGNMDRALK 160
PD LV +++ S+LG L+ A + ++V K+ + Q + A+L+++ AKC +++ A K
Sbjct: 379 PDAIALVKILTTISELGILQQAVCLHAFVIKNGFENNQ-FIGASLIEVYAKCSSIEDANK 437
Query: 161 LFKEMPKRDLVSYCSMIQGLSIHGCGEDAVRLFNSMLMEG-LVPDEVAFTIILTACSHSG 219
+FK M +D+V++ S+I HG GE+A++LF M P+ V F IL+ACSHSG
Sbjct: 438 VFKGMTYKDVVTWSSIIAAYGFHGQGEEALKLFYQMANHSDTKPNNVTFISILSACSHSG 497
Query: 220 LVDEGWNYFQSMKQKYGISPSPDHFACMVDLLSRSGHLGDAYELMKSM-HEPHAGAWGAL 278
L+ EG N F M KY + P+ +H+A MVDLL R G L A +++ +M + WGAL
Sbjct: 498 LIKEGINMFDIMVNKYKLKPNSEHYAIMVDLLGRMGELDMALDVINNMPMQAGPDIWGAL 557
Query: 279 LGACKLHGDSDLGEIVANQLFELEPQNAANYILLSNIYAAAERWIDVSLVRSRMRERSVQ 338
LGAC++H + +GE+ A LF L+P +A YILLSNIY+ E W + +R ++E+ +
Sbjct: 558 LGACRIHQNIKMGEVAAKNLFSLDPNHAGYYILLSNIYSVDENWHSATKLRRLVKEKRLN 617
Query: 339 KIPGCS 344
KI G S
Sbjct: 618 KIVGQS 623
Score = 117 bits (293), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 64/249 (25%), Positives = 127/249 (51%), Gaps = 2/249 (0%)
Query: 41 TTMIDGYAKAGDMAAARFLFEQATEKDVVAWSALISGYVQNGQPNQALKVFLEMESKNVK 100
+++ Y K G + A LF + ++KD+++WS +++ Y NG L +F EM K +K
Sbjct: 218 NSLLHLYGKTGSIKNASNLFREMSDKDIISWSTMVACYADNGAETDVLDLFNEMLDKRIK 277
Query: 101 PDEFILVSLMSATSQLGHLELAQWVDSYVSKSSIDLQQDHVIAALLDMNAKCGNMDRALK 160
P+ +VS++ A + + +LE + +++ V AL+DM KC + ++A+
Sbjct: 278 PNWVTVVSVLRACACISNLEEGMKIHELAVNYGFEMETT-VSTALMDMYMKCFSPEKAVD 336
Query: 161 LFKEMPKRDLVSYCSMIQGLSIHGCGEDAVRLFNSMLMEGLVPDEVAFTIILTACSHSGL 220
LF MPK+D++++ + G + +G +++ +F +ML G PD +A ILT S G+
Sbjct: 337 LFNRMPKKDVIAWAVLFSGYADNGMVHESMWVFRNMLSSGTRPDAIALVKILTTISELGI 396
Query: 221 VDEGWNYFQSMKQKYGISPSPDHFACMVDLLSRSGHLGDAYELMKSMHEPHAGAWGALLG 280
+ + + K G + A ++++ ++ + DA ++ K M W +++
Sbjct: 397 LQQAV-CLHAFVIKNGFENNQFIGASLIEVYAKCSSIEDANKVFKGMTYKDVVTWSSIIA 455
Query: 281 ACKLHGDSD 289
A HG +
Sbjct: 456 AYGFHGQGE 464
Score = 114 bits (286), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 73/240 (30%), Positives = 121/240 (50%), Gaps = 3/240 (1%)
Query: 41 TTMIDGYAKAGDMAAARFLFEQATEKDVVAWSALISGYVQNGQPNQALKVFLEME-SKNV 99
+ +ID Y K G M A +F + + DVV W+++ISGY Q+G P AL F M S+ V
Sbjct: 116 SALIDLYTKCGQMNDAVKVFMEYPKPDVVLWTSIISGYEQSGSPELALAFFSRMVVSEKV 175
Query: 100 KPDEFILVSLMSATSQLGHLELAQWVDSYVSKSSIDLQQDHVIAALLDMNAKCGNMDRAL 159
PD LVS+ SA +QL + +L + V +V + +D + + +LL + K G++ A
Sbjct: 176 SPDPVTLVSVASACAQLSNFKLGRSVHGFVKRKGLD-NKLCLANSLLHLYGKTGSIKNAS 234
Query: 160 KLFKEMPKRDLVSYCSMIQGLSIHGCGEDAVRLFNSMLMEGLVPDEVAFTIILTACSHSG 219
LF+EM +D++S+ +M+ + +G D + LFN ML + + P+ V +L AC+
Sbjct: 235 NLFREMSDKDIISWSTMVACYADNGAETDVLDLFNEMLDKRIKPNWVTVVSVLRACACIS 294
Query: 220 LVDEGWNYFQSMKQKYGISPSPDHFACMVDLLSRSGHLGDAYELMKSMHEPHAGAWGALL 279
++EG + YG ++D+ + A +L M + AW L
Sbjct: 295 NLEEGMK-IHELAVNYGFEMETTVSTALMDMYMKCFSPEKAVDLFNRMPKKDVIAWAVLF 353
Score = 89.7 bits (221), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 66/250 (26%), Positives = 121/250 (48%), Gaps = 9/250 (3%)
Query: 39 SFTTMIDGYAKAGDMAAARFLFEQATEKDVVAWSALISGYVQNGQPNQALKVFLEME--- 95
SF+ +I + + A LF++ + V W+AL+ Y G+ + L +F +M
Sbjct: 8 SFSEVIGNLLQYASIHHAHKLFQETPHRTVYLWNALLRSYCFEGEWVETLSLFRQMNNVS 67
Query: 96 --SKNVKPDEFILVSLMSATSQLGHLELAQWVDSYVSKSSIDLQQDHVIAALLDMNAKCG 153
S +PD + + + + + L L L + + ++ K ID V +AL+D+ KCG
Sbjct: 68 SVSIEERPDNYSVSIALKSCAGLRKLLLGKVIHGFLKKVRIDGDM-FVGSALIDLYTKCG 126
Query: 154 NMDRALKLFKEMPKRDLVSYCSMIQGLSIHGCGEDAVRLFNSMLM-EGLVPDEVAFTIIL 212
M+ A+K+F E PK D+V + S+I G G E A+ F+ M++ E + PD V +
Sbjct: 127 QMNDAVKVFMEYPKPDVVLWTSIISGYEQSGSPELALAFFSRMVVSEKVSPDPVTLVSVA 186
Query: 213 TACSHSGLVDEGWNYFQSMKQKYGISPSPDHFACMVDLLSRSGHLGDAYELMKSMHEPHA 272
+AC+ G + +K+K G+ ++ L ++G + +A L + M +
Sbjct: 187 SACAQLSNFKLGRSVHGFVKRK-GLDNKLCLANSLLHLYGKTGSIKNASNLFREMSDKDI 245
Query: 273 GAWGALLGAC 282
+W ++ AC
Sbjct: 246 ISWSTMV-AC 254
Score = 75.5 bits (184), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 70/282 (24%), Positives = 123/282 (43%), Gaps = 62/282 (21%)
Query: 1 MPQRNVASWNAMLCGFVKDGDLSSARGVFDAMP--------------------------- 33
MP+++V +W + G+ +G + + VF M
Sbjct: 341 MPKKDVIAWAVLFSGYADNGMVHESMWVFRNMLSSGTRPDAIALVKILTTISELGILQQA 400
Query: 34 ------------EKNVVSFTTMIDGYAKAGDMAAARFLFEQATEKDVVAWSALISGYVQN 81
E N ++I+ YAK + A +F+ T KDVV WS++I+ Y +
Sbjct: 401 VCLHAFVIKNGFENNQFIGASLIEVYAKCSSIEDANKVFKGMTYKDVVTWSSIIAAYGFH 460
Query: 82 GQPNQALKVFLEMES-KNVKPDEFILVSLMSATSQLGHL-ELAQWVDSYVSKSSIDLQQD 139
GQ +ALK+F +M + + KP+ +S++SA S G + E D V+K + +
Sbjct: 461 GQGEEALKLFYQMANHSDTKPNNVTFISILSACSHSGLIKEGINMFDIMVNKYKLKPNSE 520
Query: 140 HVIAALLDMNAKCGNMDRALKLFKEMPKR-------DLVSYCSMIQGLSIHGCGEDAVR- 191
H A ++D+ + G +D AL + MP + L+ C + Q + + GE A +
Sbjct: 521 HY-AIMVDLLGRMGELDMALDVINNMPMQAGPDIWGALLGACRIHQNIKM---GEVAAKN 576
Query: 192 LFNSMLMEGLVPDEVAFTIILTACSHSGLVDEGWNYFQSMKQ 233
LF+ L P+ + I+L S+ VDE W+ +++
Sbjct: 577 LFS------LDPNHAGYYILL---SNIYSVDENWHSATKLRR 609
>Medtr4g015760.3 | PPR containing plant-like protein | HC |
chr4:4765180-4759488 | 20130731
Length = 673
Score = 227 bits (579), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 121/306 (39%), Positives = 185/306 (60%), Gaps = 3/306 (0%)
Query: 41 TTMIDGYAKAGDMAAARFLFEQATEKDVVAWSALISGYVQNGQPNQALKVFLEMESKNVK 100
T ++D Y K A LF + +KDV+AW+ L SGY NG ++++ VF M S +
Sbjct: 319 TALMDMYMKCFSPEKAVDLFNRMPKKDVIAWAVLFSGYADNGMVHESMWVFRNMLSSGTR 378
Query: 101 PDEFILVSLMSATSQLGHLELAQWVDSYVSKSSIDLQQDHVIAALLDMNAKCGNMDRALK 160
PD LV +++ S+LG L+ A + ++V K+ + Q + A+L+++ AKC +++ A K
Sbjct: 379 PDAIALVKILTTISELGILQQAVCLHAFVIKNGFENNQ-FIGASLIEVYAKCSSIEDANK 437
Query: 161 LFKEMPKRDLVSYCSMIQGLSIHGCGEDAVRLFNSMLMEG-LVPDEVAFTIILTACSHSG 219
+FK M +D+V++ S+I HG GE+A++LF M P+ V F IL+ACSHSG
Sbjct: 438 VFKGMTYKDVVTWSSIIAAYGFHGQGEEALKLFYQMANHSDTKPNNVTFISILSACSHSG 497
Query: 220 LVDEGWNYFQSMKQKYGISPSPDHFACMVDLLSRSGHLGDAYELMKSM-HEPHAGAWGAL 278
L+ EG N F M KY + P+ +H+A MVDLL R G L A +++ +M + WGAL
Sbjct: 498 LIKEGINMFDIMVNKYKLKPNSEHYAIMVDLLGRMGELDMALDVINNMPMQAGPDIWGAL 557
Query: 279 LGACKLHGDSDLGEIVANQLFELEPQNAANYILLSNIYAAAERWIDVSLVRSRMRERSVQ 338
LGAC++H + +GE+ A LF L+P +A YILLSNIY+ E W + +R ++E+ +
Sbjct: 558 LGACRIHQNIKMGEVAAKNLFSLDPNHAGYYILLSNIYSVDENWHSATKLRRLVKEKRLN 617
Query: 339 KIPGCS 344
KI G S
Sbjct: 618 KIVGQS 623
Score = 117 bits (293), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 64/249 (25%), Positives = 127/249 (51%), Gaps = 2/249 (0%)
Query: 41 TTMIDGYAKAGDMAAARFLFEQATEKDVVAWSALISGYVQNGQPNQALKVFLEMESKNVK 100
+++ Y K G + A LF + ++KD+++WS +++ Y NG L +F EM K +K
Sbjct: 218 NSLLHLYGKTGSIKNASNLFREMSDKDIISWSTMVACYADNGAETDVLDLFNEMLDKRIK 277
Query: 101 PDEFILVSLMSATSQLGHLELAQWVDSYVSKSSIDLQQDHVIAALLDMNAKCGNMDRALK 160
P+ +VS++ A + + +LE + +++ V AL+DM KC + ++A+
Sbjct: 278 PNWVTVVSVLRACACISNLEEGMKIHELAVNYGFEMETT-VSTALMDMYMKCFSPEKAVD 336
Query: 161 LFKEMPKRDLVSYCSMIQGLSIHGCGEDAVRLFNSMLMEGLVPDEVAFTIILTACSHSGL 220
LF MPK+D++++ + G + +G +++ +F +ML G PD +A ILT S G+
Sbjct: 337 LFNRMPKKDVIAWAVLFSGYADNGMVHESMWVFRNMLSSGTRPDAIALVKILTTISELGI 396
Query: 221 VDEGWNYFQSMKQKYGISPSPDHFACMVDLLSRSGHLGDAYELMKSMHEPHAGAWGALLG 280
+ + + K G + A ++++ ++ + DA ++ K M W +++
Sbjct: 397 LQQAV-CLHAFVIKNGFENNQFIGASLIEVYAKCSSIEDANKVFKGMTYKDVVTWSSIIA 455
Query: 281 ACKLHGDSD 289
A HG +
Sbjct: 456 AYGFHGQGE 464
Score = 114 bits (286), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 73/240 (30%), Positives = 121/240 (50%), Gaps = 3/240 (1%)
Query: 41 TTMIDGYAKAGDMAAARFLFEQATEKDVVAWSALISGYVQNGQPNQALKVFLEME-SKNV 99
+ +ID Y K G M A +F + + DVV W+++ISGY Q+G P AL F M S+ V
Sbjct: 116 SALIDLYTKCGQMNDAVKVFMEYPKPDVVLWTSIISGYEQSGSPELALAFFSRMVVSEKV 175
Query: 100 KPDEFILVSLMSATSQLGHLELAQWVDSYVSKSSIDLQQDHVIAALLDMNAKCGNMDRAL 159
PD LVS+ SA +QL + +L + V +V + +D + + +LL + K G++ A
Sbjct: 176 SPDPVTLVSVASACAQLSNFKLGRSVHGFVKRKGLD-NKLCLANSLLHLYGKTGSIKNAS 234
Query: 160 KLFKEMPKRDLVSYCSMIQGLSIHGCGEDAVRLFNSMLMEGLVPDEVAFTIILTACSHSG 219
LF+EM +D++S+ +M+ + +G D + LFN ML + + P+ V +L AC+
Sbjct: 235 NLFREMSDKDIISWSTMVACYADNGAETDVLDLFNEMLDKRIKPNWVTVVSVLRACACIS 294
Query: 220 LVDEGWNYFQSMKQKYGISPSPDHFACMVDLLSRSGHLGDAYELMKSMHEPHAGAWGALL 279
++EG + YG ++D+ + A +L M + AW L
Sbjct: 295 NLEEGMK-IHELAVNYGFEMETTVSTALMDMYMKCFSPEKAVDLFNRMPKKDVIAWAVLF 353
Score = 89.7 bits (221), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 66/250 (26%), Positives = 121/250 (48%), Gaps = 9/250 (3%)
Query: 39 SFTTMIDGYAKAGDMAAARFLFEQATEKDVVAWSALISGYVQNGQPNQALKVFLEME--- 95
SF+ +I + + A LF++ + V W+AL+ Y G+ + L +F +M
Sbjct: 8 SFSEVIGNLLQYASIHHAHKLFQETPHRTVYLWNALLRSYCFEGEWVETLSLFRQMNNVS 67
Query: 96 --SKNVKPDEFILVSLMSATSQLGHLELAQWVDSYVSKSSIDLQQDHVIAALLDMNAKCG 153
S +PD + + + + + L L L + + ++ K ID V +AL+D+ KCG
Sbjct: 68 SVSIEERPDNYSVSIALKSCAGLRKLLLGKVIHGFLKKVRIDGDM-FVGSALIDLYTKCG 126
Query: 154 NMDRALKLFKEMPKRDLVSYCSMIQGLSIHGCGEDAVRLFNSMLM-EGLVPDEVAFTIIL 212
M+ A+K+F E PK D+V + S+I G G E A+ F+ M++ E + PD V +
Sbjct: 127 QMNDAVKVFMEYPKPDVVLWTSIISGYEQSGSPELALAFFSRMVVSEKVSPDPVTLVSVA 186
Query: 213 TACSHSGLVDEGWNYFQSMKQKYGISPSPDHFACMVDLLSRSGHLGDAYELMKSMHEPHA 272
+AC+ G + +K+K G+ ++ L ++G + +A L + M +
Sbjct: 187 SACAQLSNFKLGRSVHGFVKRK-GLDNKLCLANSLLHLYGKTGSIKNASNLFREMSDKDI 245
Query: 273 GAWGALLGAC 282
+W ++ AC
Sbjct: 246 ISWSTMV-AC 254
Score = 75.5 bits (184), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 70/282 (24%), Positives = 123/282 (43%), Gaps = 62/282 (21%)
Query: 1 MPQRNVASWNAMLCGFVKDGDLSSARGVFDAMP--------------------------- 33
MP+++V +W + G+ +G + + VF M
Sbjct: 341 MPKKDVIAWAVLFSGYADNGMVHESMWVFRNMLSSGTRPDAIALVKILTTISELGILQQA 400
Query: 34 ------------EKNVVSFTTMIDGYAKAGDMAAARFLFEQATEKDVVAWSALISGYVQN 81
E N ++I+ YAK + A +F+ T KDVV WS++I+ Y +
Sbjct: 401 VCLHAFVIKNGFENNQFIGASLIEVYAKCSSIEDANKVFKGMTYKDVVTWSSIIAAYGFH 460
Query: 82 GQPNQALKVFLEMES-KNVKPDEFILVSLMSATSQLGHL-ELAQWVDSYVSKSSIDLQQD 139
GQ +ALK+F +M + + KP+ +S++SA S G + E D V+K + +
Sbjct: 461 GQGEEALKLFYQMANHSDTKPNNVTFISILSACSHSGLIKEGINMFDIMVNKYKLKPNSE 520
Query: 140 HVIAALLDMNAKCGNMDRALKLFKEMPKR-------DLVSYCSMIQGLSIHGCGEDAVR- 191
H A ++D+ + G +D AL + MP + L+ C + Q + + GE A +
Sbjct: 521 HY-AIMVDLLGRMGELDMALDVINNMPMQAGPDIWGALLGACRIHQNIKM---GEVAAKN 576
Query: 192 LFNSMLMEGLVPDEVAFTIILTACSHSGLVDEGWNYFQSMKQ 233
LF+ L P+ + I+L S+ VDE W+ +++
Sbjct: 577 LFS------LDPNHAGYYILL---SNIYSVDENWHSATKLRR 609
>Medtr4g118700.1 | PPR containing plant-like protein | HC |
chr4:49164700-49162766 | 20130731
Length = 625
Score = 227 bits (578), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 117/320 (36%), Positives = 190/320 (59%), Gaps = 4/320 (1%)
Query: 28 VFDAMPEKNVVSFTTMIDGYAKAGDMAAARFLFEQATEKDVVAWSALISGYVQNGQPNQA 87
VF++ N VS+ +ID + K GD A F+QA EK++V+W+++I GY +NG + A
Sbjct: 261 VFNSGGAFNQVSWNAIIDAHMKVGDTQKALLAFQQAPEKNIVSWTSMIVGYTRNGNGDLA 320
Query: 88 LKVFLEMESKNVKPDEFILVSLMSATSQLGHLELAQWVDSYVSKSSIDLQQDHVIAALLD 147
L +FL+M+ + + D+ + +++ A + L L + V S + +D + V +L++
Sbjct: 321 LSLFLDMKRNSFQLDDLVAGAVLHACASLAILVHGKMVHSCIIHLGLD-KYLFVGNSLIN 379
Query: 148 MNAKCGNMDRALKLFKEMPKRDLVSYCSMIQGLSIHGCGEDAVRLFNSMLMEGLVPDEVA 207
M AKCG+++ + + + +DLVS+ SM+ ++G G +A+ +F M+ G+ PDEV
Sbjct: 380 MYAKCGDIEGSKLALRGINDKDLVSWNSMLFAFGLNGRGNEAICMFREMVASGVRPDEVT 439
Query: 208 FTIILTACSHSGLVDEGWNYFQSMKQKYGISPSPDHFACMVDLLSRSGHLGDAYELMKSM 267
FT +L CSH GL+DEG+ +FQSM +YG+ DH ACMVD+L R G++ +A L +
Sbjct: 440 FTGLLMTCSHLGLIDEGFAFFQSMSLEYGLVQGMDHVACMVDMLGRGGYVAEAQSLARKY 499
Query: 268 HEP---HAGAWGALLGACKLHGDSDLGEIVANQLFELEPQNAANYILLSNIYAAAERWID 324
+ + LLGAC HGD G V + LEP+ Y+LLSN+Y A+ +W +
Sbjct: 500 SKTSRDKTNSCEVLLGACHAHGDLGTGSSVGEYVKNLEPKKEVGYVLLSNMYCASGKWKE 559
Query: 325 VSLVRSRMRERSVQKIPGCS 344
+VR M ++ V+K+PGCS
Sbjct: 560 AEMVRKEMMDQGVKKVPGCS 579
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 71/316 (22%), Positives = 146/316 (46%), Gaps = 35/316 (11%)
Query: 3 QRNVASWNAMLCGFVKDGDLSSARGVFDAMPEKNVVSFTTMIDGYAKAGDMAAARFLFEQ 62
Q ++ NA++ + K + + AR VFD M N V++ +++ YA A +F
Sbjct: 104 QSSLPVANALIDMYGKCFNPNDARKVFDEMNYSNEVTWCSLLFAYANTCRFDMAFEIFRS 163
Query: 63 ATEKDVVAWSALISGYVQNGQPNQALKVFLEMESKNVKPDEFILVSLMSATSQ------- 115
EK +AW+ +I+ + + G+ L +F EM +PD++ +LMSA ++
Sbjct: 164 MPEKVEIAWNIIIAAHARCGEVEACLHLFKEMCENLYQPDQWTFSALMSACTESMESLHG 223
Query: 116 -LGH-----------LELAQWVDSYVSKSSIDLQQDHVIA-------------ALLDMNA 150
+ H +E+ + S+ +K ++ D V A++D +
Sbjct: 224 CMMHCFVIKSGWSTAMEVNNSIVSFYAK--LECHGDAVKVFNSGGAFNQVSWNAIIDAHM 281
Query: 151 KCGNMDRALKLFKEMPKRDLVSYCSMIQGLSIHGCGEDAVRLFNSMLMEGLVPDEVAFTI 210
K G+ +AL F++ P++++VS+ SMI G + +G G+ A+ LF M D++
Sbjct: 282 KVGDTQKALLAFQQAPEKNIVSWTSMIVGYTRNGNGDLALSLFLDMKRNSFQLDDLVAGA 341
Query: 211 ILTACSHSGLVDEGWNYFQSMKQKYGISPSPDHFACMVDLLSRSGHLGDAYELMKSMHEP 270
+L AC+ ++ G S G+ ++++ ++ G + + ++ +++
Sbjct: 342 VLHACASLAILVHG-KMVHSCIIHLGLDKYLFVGNSLINMYAKCGDIEGSKLALRGINDK 400
Query: 271 HAGAWGALLGACKLHG 286
+W ++L A L+G
Sbjct: 401 DLVSWNSMLFAFGLNG 416
Score = 75.5 bits (184), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 58/199 (29%), Positives = 100/199 (50%), Gaps = 12/199 (6%)
Query: 37 VVSFTTMIDGYAKAGDMAAARFLFEQATEKDVVAWSALISGYVQNGQPNQALKVFLEMES 96
++ T+ I A++G + AR LF++ E+D VAW+A+++ Y + G Q +F M
Sbjct: 5 LIRATSEIVSLARSGRICHARKLFDEMPERDTVAWNAMLTAYSRLGLYQQTFDLFDSMRR 64
Query: 97 -KNVKPDEFILVSLMSATSQLGHLELAQWVDSYVSKSSIDLQQDHVIAALLDMNAKCGNM 155
+ KPD F + +++ + + + S V S V AL+DM KC N
Sbjct: 65 ISDSKPDNFSYSAAINSCAGASDIRFGTKLHSLVVVSGYQ-SSLPVANALIDMYGKCFNP 123
Query: 156 DRALKLFKEMPKRDLVSYCSMIQGLSIHGCGED-AVRLFNSMLMEGLVPD--EVAFTIIL 212
+ A K+F EM + V++CS++ + + C D A +F SM P+ E+A+ II+
Sbjct: 124 NDARKVFDEMNYSNEVTWCSLLFAYA-NTCRFDMAFEIFRSM------PEKVEIAWNIII 176
Query: 213 TACSHSGLVDEGWNYFQSM 231
A + G V+ + F+ M
Sbjct: 177 AAHARCGEVEACLHLFKEM 195
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/203 (26%), Positives = 93/203 (45%), Gaps = 27/203 (13%)
Query: 1 MPQRNVASWNAMLCGFVKDGDLSSARGVFDAM-----PEKNVVSFTTMIDGYAKAGDMAA 55
MP+R+ +WNAML + + G +FD+M + + S++ I+ A A D+
Sbjct: 31 MPERDTVAWNAMLTAYSRLGLYQQTFDLFDSMRRISDSKPDNFSYSAAINSCAGASDIRF 90
Query: 56 ARFLFE----QATEKDVVAWSALISGYVQNGQPNQALKVFLEMESKNVKPDEFILVSLMS 111
L + + +ALI Y + PN A KVF EM N E SL+
Sbjct: 91 GTKLHSLVVVSGYQSSLPVANALIDMYGKCFNPNDARKVFDEMNYSN----EVTWCSLLF 146
Query: 112 ATSQLGHLELAQWVDSYVSKSSIDLQQDHVIAALLDMNAKCGNMDRALKLFKEMPKR--- 168
A + ++A + + + +++ + +IAA +A+CG ++ L LFKEM +
Sbjct: 147 AYANTCRFDMAFEIFRSMPE-KVEIAWNIIIAA----HARCGEVEACLHLFKEMCENLYQ 201
Query: 169 -DLVSYCSMIQGL-----SIHGC 185
D ++ +++ S+HGC
Sbjct: 202 PDQWTFSALMSACTESMESLHGC 224
>Medtr4g015760.4 | PPR containing plant-like protein | HC |
chr4:4765180-4759488 | 20130731
Length = 703
Score = 226 bits (577), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 121/306 (39%), Positives = 185/306 (60%), Gaps = 3/306 (0%)
Query: 41 TTMIDGYAKAGDMAAARFLFEQATEKDVVAWSALISGYVQNGQPNQALKVFLEMESKNVK 100
T ++D Y K A LF + +KDV+AW+ L SGY NG ++++ VF M S +
Sbjct: 349 TALMDMYMKCFSPEKAVDLFNRMPKKDVIAWAVLFSGYADNGMVHESMWVFRNMLSSGTR 408
Query: 101 PDEFILVSLMSATSQLGHLELAQWVDSYVSKSSIDLQQDHVIAALLDMNAKCGNMDRALK 160
PD LV +++ S+LG L+ A + ++V K+ + Q + A+L+++ AKC +++ A K
Sbjct: 409 PDAIALVKILTTISELGILQQAVCLHAFVIKNGFENNQ-FIGASLIEVYAKCSSIEDANK 467
Query: 161 LFKEMPKRDLVSYCSMIQGLSIHGCGEDAVRLFNSMLMEG-LVPDEVAFTIILTACSHSG 219
+FK M +D+V++ S+I HG GE+A++LF M P+ V F IL+ACSHSG
Sbjct: 468 VFKGMTYKDVVTWSSIIAAYGFHGQGEEALKLFYQMANHSDTKPNNVTFISILSACSHSG 527
Query: 220 LVDEGWNYFQSMKQKYGISPSPDHFACMVDLLSRSGHLGDAYELMKSM-HEPHAGAWGAL 278
L+ EG N F M KY + P+ +H+A MVDLL R G L A +++ +M + WGAL
Sbjct: 528 LIKEGINMFDIMVNKYKLKPNSEHYAIMVDLLGRMGELDMALDVINNMPMQAGPDIWGAL 587
Query: 279 LGACKLHGDSDLGEIVANQLFELEPQNAANYILLSNIYAAAERWIDVSLVRSRMRERSVQ 338
LGAC++H + +GE+ A LF L+P +A YILLSNIY+ E W + +R ++E+ +
Sbjct: 588 LGACRIHQNIKMGEVAAKNLFSLDPNHAGYYILLSNIYSVDENWHSATKLRRLVKEKRLN 647
Query: 339 KIPGCS 344
KI G S
Sbjct: 648 KIVGQS 653
Score = 117 bits (292), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 64/249 (25%), Positives = 127/249 (51%), Gaps = 2/249 (0%)
Query: 41 TTMIDGYAKAGDMAAARFLFEQATEKDVVAWSALISGYVQNGQPNQALKVFLEMESKNVK 100
+++ Y K G + A LF + ++KD+++WS +++ Y NG L +F EM K +K
Sbjct: 248 NSLLHLYGKTGSIKNASNLFREMSDKDIISWSTMVACYADNGAETDVLDLFNEMLDKRIK 307
Query: 101 PDEFILVSLMSATSQLGHLELAQWVDSYVSKSSIDLQQDHVIAALLDMNAKCGNMDRALK 160
P+ +VS++ A + + +LE + +++ V AL+DM KC + ++A+
Sbjct: 308 PNWVTVVSVLRACACISNLEEGMKIHELAVNYGFEMETT-VSTALMDMYMKCFSPEKAVD 366
Query: 161 LFKEMPKRDLVSYCSMIQGLSIHGCGEDAVRLFNSMLMEGLVPDEVAFTIILTACSHSGL 220
LF MPK+D++++ + G + +G +++ +F +ML G PD +A ILT S G+
Sbjct: 367 LFNRMPKKDVIAWAVLFSGYADNGMVHESMWVFRNMLSSGTRPDAIALVKILTTISELGI 426
Query: 221 VDEGWNYFQSMKQKYGISPSPDHFACMVDLLSRSGHLGDAYELMKSMHEPHAGAWGALLG 280
+ + + K G + A ++++ ++ + DA ++ K M W +++
Sbjct: 427 LQQAV-CLHAFVIKNGFENNQFIGASLIEVYAKCSSIEDANKVFKGMTYKDVVTWSSIIA 485
Query: 281 ACKLHGDSD 289
A HG +
Sbjct: 486 AYGFHGQGE 494
Score = 114 bits (286), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 73/240 (30%), Positives = 121/240 (50%), Gaps = 3/240 (1%)
Query: 41 TTMIDGYAKAGDMAAARFLFEQATEKDVVAWSALISGYVQNGQPNQALKVFLEME-SKNV 99
+ +ID Y K G M A +F + + DVV W+++ISGY Q+G P AL F M S+ V
Sbjct: 146 SALIDLYTKCGQMNDAVKVFMEYPKPDVVLWTSIISGYEQSGSPELALAFFSRMVVSEKV 205
Query: 100 KPDEFILVSLMSATSQLGHLELAQWVDSYVSKSSIDLQQDHVIAALLDMNAKCGNMDRAL 159
PD LVS+ SA +QL + +L + V +V + +D + + +LL + K G++ A
Sbjct: 206 SPDPVTLVSVASACAQLSNFKLGRSVHGFVKRKGLD-NKLCLANSLLHLYGKTGSIKNAS 264
Query: 160 KLFKEMPKRDLVSYCSMIQGLSIHGCGEDAVRLFNSMLMEGLVPDEVAFTIILTACSHSG 219
LF+EM +D++S+ +M+ + +G D + LFN ML + + P+ V +L AC+
Sbjct: 265 NLFREMSDKDIISWSTMVACYADNGAETDVLDLFNEMLDKRIKPNWVTVVSVLRACACIS 324
Query: 220 LVDEGWNYFQSMKQKYGISPSPDHFACMVDLLSRSGHLGDAYELMKSMHEPHAGAWGALL 279
++EG + YG ++D+ + A +L M + AW L
Sbjct: 325 NLEEGMK-IHELAVNYGFEMETTVSTALMDMYMKCFSPEKAVDLFNRMPKKDVIAWAVLF 383
Score = 89.7 bits (221), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 65/242 (26%), Positives = 118/242 (48%), Gaps = 9/242 (3%)
Query: 47 YAKAGDMAAARFLFEQATEKDVVAWSALISGYVQNGQPNQALKVFLEME-----SKNVKP 101
YA+ + A LF++ + V W+AL+ Y G+ + L +F +M S +P
Sbjct: 46 YARYASIHHAHKLFQETPHRTVYLWNALLRSYCFEGEWVETLSLFRQMNNVSSVSIEERP 105
Query: 102 DEFILVSLMSATSQLGHLELAQWVDSYVSKSSIDLQQDHVIAALLDMNAKCGNMDRALKL 161
D + + + + + L L L + + ++ K ID V +AL+D+ KCG M+ A+K+
Sbjct: 106 DNYSVSIALKSCAGLRKLLLGKVIHGFLKKVRIDGDM-FVGSALIDLYTKCGQMNDAVKV 164
Query: 162 FKEMPKRDLVSYCSMIQGLSIHGCGEDAVRLFNSMLM-EGLVPDEVAFTIILTACSHSGL 220
F E PK D+V + S+I G G E A+ F+ M++ E + PD V + +AC+
Sbjct: 165 FMEYPKPDVVLWTSIISGYEQSGSPELALAFFSRMVVSEKVSPDPVTLVSVASACAQLSN 224
Query: 221 VDEGWNYFQSMKQKYGISPSPDHFACMVDLLSRSGHLGDAYELMKSMHEPHAGAWGALLG 280
G + +K+K G+ ++ L ++G + +A L + M + +W ++
Sbjct: 225 FKLGRSVHGFVKRK-GLDNKLCLANSLLHLYGKTGSIKNASNLFREMSDKDIISWSTMV- 282
Query: 281 AC 282
AC
Sbjct: 283 AC 284
Score = 75.5 bits (184), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 70/282 (24%), Positives = 123/282 (43%), Gaps = 62/282 (21%)
Query: 1 MPQRNVASWNAMLCGFVKDGDLSSARGVFDAMP--------------------------- 33
MP+++V +W + G+ +G + + VF M
Sbjct: 371 MPKKDVIAWAVLFSGYADNGMVHESMWVFRNMLSSGTRPDAIALVKILTTISELGILQQA 430
Query: 34 ------------EKNVVSFTTMIDGYAKAGDMAAARFLFEQATEKDVVAWSALISGYVQN 81
E N ++I+ YAK + A +F+ T KDVV WS++I+ Y +
Sbjct: 431 VCLHAFVIKNGFENNQFIGASLIEVYAKCSSIEDANKVFKGMTYKDVVTWSSIIAAYGFH 490
Query: 82 GQPNQALKVFLEMES-KNVKPDEFILVSLMSATSQLGHL-ELAQWVDSYVSKSSIDLQQD 139
GQ +ALK+F +M + + KP+ +S++SA S G + E D V+K + +
Sbjct: 491 GQGEEALKLFYQMANHSDTKPNNVTFISILSACSHSGLIKEGINMFDIMVNKYKLKPNSE 550
Query: 140 HVIAALLDMNAKCGNMDRALKLFKEMPKR-------DLVSYCSMIQGLSIHGCGEDAVR- 191
H A ++D+ + G +D AL + MP + L+ C + Q + + GE A +
Sbjct: 551 HY-AIMVDLLGRMGELDMALDVINNMPMQAGPDIWGALLGACRIHQNIKM---GEVAAKN 606
Query: 192 LFNSMLMEGLVPDEVAFTIILTACSHSGLVDEGWNYFQSMKQ 233
LF+ L P+ + I+L S+ VDE W+ +++
Sbjct: 607 LFS------LDPNHAGYYILL---SNIYSVDENWHSATKLRR 639
>Medtr4g015760.1 | PPR containing plant-like protein | HC |
chr4:4766254-4759488 | 20130731
Length = 703
Score = 226 bits (577), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 121/306 (39%), Positives = 185/306 (60%), Gaps = 3/306 (0%)
Query: 41 TTMIDGYAKAGDMAAARFLFEQATEKDVVAWSALISGYVQNGQPNQALKVFLEMESKNVK 100
T ++D Y K A LF + +KDV+AW+ L SGY NG ++++ VF M S +
Sbjct: 349 TALMDMYMKCFSPEKAVDLFNRMPKKDVIAWAVLFSGYADNGMVHESMWVFRNMLSSGTR 408
Query: 101 PDEFILVSLMSATSQLGHLELAQWVDSYVSKSSIDLQQDHVIAALLDMNAKCGNMDRALK 160
PD LV +++ S+LG L+ A + ++V K+ + Q + A+L+++ AKC +++ A K
Sbjct: 409 PDAIALVKILTTISELGILQQAVCLHAFVIKNGFENNQ-FIGASLIEVYAKCSSIEDANK 467
Query: 161 LFKEMPKRDLVSYCSMIQGLSIHGCGEDAVRLFNSMLMEG-LVPDEVAFTIILTACSHSG 219
+FK M +D+V++ S+I HG GE+A++LF M P+ V F IL+ACSHSG
Sbjct: 468 VFKGMTYKDVVTWSSIIAAYGFHGQGEEALKLFYQMANHSDTKPNNVTFISILSACSHSG 527
Query: 220 LVDEGWNYFQSMKQKYGISPSPDHFACMVDLLSRSGHLGDAYELMKSM-HEPHAGAWGAL 278
L+ EG N F M KY + P+ +H+A MVDLL R G L A +++ +M + WGAL
Sbjct: 528 LIKEGINMFDIMVNKYKLKPNSEHYAIMVDLLGRMGELDMALDVINNMPMQAGPDIWGAL 587
Query: 279 LGACKLHGDSDLGEIVANQLFELEPQNAANYILLSNIYAAAERWIDVSLVRSRMRERSVQ 338
LGAC++H + +GE+ A LF L+P +A YILLSNIY+ E W + +R ++E+ +
Sbjct: 588 LGACRIHQNIKMGEVAAKNLFSLDPNHAGYYILLSNIYSVDENWHSATKLRRLVKEKRLN 647
Query: 339 KIPGCS 344
KI G S
Sbjct: 648 KIVGQS 653
Score = 117 bits (292), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 64/249 (25%), Positives = 127/249 (51%), Gaps = 2/249 (0%)
Query: 41 TTMIDGYAKAGDMAAARFLFEQATEKDVVAWSALISGYVQNGQPNQALKVFLEMESKNVK 100
+++ Y K G + A LF + ++KD+++WS +++ Y NG L +F EM K +K
Sbjct: 248 NSLLHLYGKTGSIKNASNLFREMSDKDIISWSTMVACYADNGAETDVLDLFNEMLDKRIK 307
Query: 101 PDEFILVSLMSATSQLGHLELAQWVDSYVSKSSIDLQQDHVIAALLDMNAKCGNMDRALK 160
P+ +VS++ A + + +LE + +++ V AL+DM KC + ++A+
Sbjct: 308 PNWVTVVSVLRACACISNLEEGMKIHELAVNYGFEMETT-VSTALMDMYMKCFSPEKAVD 366
Query: 161 LFKEMPKRDLVSYCSMIQGLSIHGCGEDAVRLFNSMLMEGLVPDEVAFTIILTACSHSGL 220
LF MPK+D++++ + G + +G +++ +F +ML G PD +A ILT S G+
Sbjct: 367 LFNRMPKKDVIAWAVLFSGYADNGMVHESMWVFRNMLSSGTRPDAIALVKILTTISELGI 426
Query: 221 VDEGWNYFQSMKQKYGISPSPDHFACMVDLLSRSGHLGDAYELMKSMHEPHAGAWGALLG 280
+ + + K G + A ++++ ++ + DA ++ K M W +++
Sbjct: 427 LQQAV-CLHAFVIKNGFENNQFIGASLIEVYAKCSSIEDANKVFKGMTYKDVVTWSSIIA 485
Query: 281 ACKLHGDSD 289
A HG +
Sbjct: 486 AYGFHGQGE 494
Score = 114 bits (286), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 73/240 (30%), Positives = 121/240 (50%), Gaps = 3/240 (1%)
Query: 41 TTMIDGYAKAGDMAAARFLFEQATEKDVVAWSALISGYVQNGQPNQALKVFLEME-SKNV 99
+ +ID Y K G M A +F + + DVV W+++ISGY Q+G P AL F M S+ V
Sbjct: 146 SALIDLYTKCGQMNDAVKVFMEYPKPDVVLWTSIISGYEQSGSPELALAFFSRMVVSEKV 205
Query: 100 KPDEFILVSLMSATSQLGHLELAQWVDSYVSKSSIDLQQDHVIAALLDMNAKCGNMDRAL 159
PD LVS+ SA +QL + +L + V +V + +D + + +LL + K G++ A
Sbjct: 206 SPDPVTLVSVASACAQLSNFKLGRSVHGFVKRKGLD-NKLCLANSLLHLYGKTGSIKNAS 264
Query: 160 KLFKEMPKRDLVSYCSMIQGLSIHGCGEDAVRLFNSMLMEGLVPDEVAFTIILTACSHSG 219
LF+EM +D++S+ +M+ + +G D + LFN ML + + P+ V +L AC+
Sbjct: 265 NLFREMSDKDIISWSTMVACYADNGAETDVLDLFNEMLDKRIKPNWVTVVSVLRACACIS 324
Query: 220 LVDEGWNYFQSMKQKYGISPSPDHFACMVDLLSRSGHLGDAYELMKSMHEPHAGAWGALL 279
++EG + YG ++D+ + A +L M + AW L
Sbjct: 325 NLEEGMK-IHELAVNYGFEMETTVSTALMDMYMKCFSPEKAVDLFNRMPKKDVIAWAVLF 383
Score = 89.7 bits (221), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 65/242 (26%), Positives = 118/242 (48%), Gaps = 9/242 (3%)
Query: 47 YAKAGDMAAARFLFEQATEKDVVAWSALISGYVQNGQPNQALKVFLEME-----SKNVKP 101
YA+ + A LF++ + V W+AL+ Y G+ + L +F +M S +P
Sbjct: 46 YARYASIHHAHKLFQETPHRTVYLWNALLRSYCFEGEWVETLSLFRQMNNVSSVSIEERP 105
Query: 102 DEFILVSLMSATSQLGHLELAQWVDSYVSKSSIDLQQDHVIAALLDMNAKCGNMDRALKL 161
D + + + + + L L L + + ++ K ID V +AL+D+ KCG M+ A+K+
Sbjct: 106 DNYSVSIALKSCAGLRKLLLGKVIHGFLKKVRIDGDM-FVGSALIDLYTKCGQMNDAVKV 164
Query: 162 FKEMPKRDLVSYCSMIQGLSIHGCGEDAVRLFNSMLM-EGLVPDEVAFTIILTACSHSGL 220
F E PK D+V + S+I G G E A+ F+ M++ E + PD V + +AC+
Sbjct: 165 FMEYPKPDVVLWTSIISGYEQSGSPELALAFFSRMVVSEKVSPDPVTLVSVASACAQLSN 224
Query: 221 VDEGWNYFQSMKQKYGISPSPDHFACMVDLLSRSGHLGDAYELMKSMHEPHAGAWGALLG 280
G + +K+K G+ ++ L ++G + +A L + M + +W ++
Sbjct: 225 FKLGRSVHGFVKRK-GLDNKLCLANSLLHLYGKTGSIKNASNLFREMSDKDIISWSTMV- 282
Query: 281 AC 282
AC
Sbjct: 283 AC 284
Score = 75.5 bits (184), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 70/282 (24%), Positives = 123/282 (43%), Gaps = 62/282 (21%)
Query: 1 MPQRNVASWNAMLCGFVKDGDLSSARGVFDAMP--------------------------- 33
MP+++V +W + G+ +G + + VF M
Sbjct: 371 MPKKDVIAWAVLFSGYADNGMVHESMWVFRNMLSSGTRPDAIALVKILTTISELGILQQA 430
Query: 34 ------------EKNVVSFTTMIDGYAKAGDMAAARFLFEQATEKDVVAWSALISGYVQN 81
E N ++I+ YAK + A +F+ T KDVV WS++I+ Y +
Sbjct: 431 VCLHAFVIKNGFENNQFIGASLIEVYAKCSSIEDANKVFKGMTYKDVVTWSSIIAAYGFH 490
Query: 82 GQPNQALKVFLEMES-KNVKPDEFILVSLMSATSQLGHL-ELAQWVDSYVSKSSIDLQQD 139
GQ +ALK+F +M + + KP+ +S++SA S G + E D V+K + +
Sbjct: 491 GQGEEALKLFYQMANHSDTKPNNVTFISILSACSHSGLIKEGINMFDIMVNKYKLKPNSE 550
Query: 140 HVIAALLDMNAKCGNMDRALKLFKEMPKR-------DLVSYCSMIQGLSIHGCGEDAVR- 191
H A ++D+ + G +D AL + MP + L+ C + Q + + GE A +
Sbjct: 551 HY-AIMVDLLGRMGELDMALDVINNMPMQAGPDIWGALLGACRIHQNIKM---GEVAAKN 606
Query: 192 LFNSMLMEGLVPDEVAFTIILTACSHSGLVDEGWNYFQSMKQ 233
LF+ L P+ + I+L S+ VDE W+ +++
Sbjct: 607 LFS------LDPNHAGYYILL---SNIYSVDENWHSATKLRR 639
>Medtr1g041310.1 | pentatricopeptide (PPR) repeat protein | HC |
chr1:15372357-15367000 | 20130731
Length = 686
Score = 226 bits (577), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 128/347 (36%), Positives = 201/347 (57%), Gaps = 10/347 (2%)
Query: 5 NVASWNAMLCGFVKDGDLSSARG----VFDAMPEKNVVSFTTMIDGYAKAGDMAAARFLF 60
NVA + ++ K D+ R V M +V +I YAK G + AR +F
Sbjct: 339 NVALFLNLISALSKLRDIRLVRSIHGYVLRHMHITHVEIANQIIHAYAKFGYVVDAREVF 398
Query: 61 EQATEKDVVAWSALISGYVQNGQPNQALKVFLEMESKNVKPDEFILVSLMSATSQLGHLE 120
+ +D+V+W+++I GYV +G ++A+ +F ++ +++ D L+ L+ A SQLG L
Sbjct: 399 NRMRTRDLVSWTSMIKGYVYHGHIDKAIILFRLLQREHLSIDSVTLIGLLQALSQLGCLS 458
Query: 121 LAQWVD--SYVSKSSIDLQQDHVIAALLDMNAKCGNMDRALKLFKEMPKRDLVSYCSMIQ 178
+ V SY DL ++ +L+ AKCG + A +F++M +R L S+ +MI
Sbjct: 459 FIKEVHCFSYRFFHGKDLSVNN---SLITTYAKCGKLCTARYIFQQMTERCLTSWNAMIG 515
Query: 179 GLSIHGCGEDAVRLFNSMLMEGLVPDEVAFTIILTACSHSGLVDEGWNYFQSMKQKYGIS 238
++HG + + LF+ M + PDEV FT ILTACSHSGLV+EG F M ++Y I
Sbjct: 516 AYAMHGNYTEVLELFDHMKAGKVTPDEVTFTSILTACSHSGLVEEGLQIFGIMMKEYAIV 575
Query: 239 PSPDHFACMVDLLSRSGHLGDAYELMKSMHEPH-AGAWGALLGACKLHGDSDLGEIVANQ 297
P+ H++C+VDLLSR+G L +AY L+KSM H + A ALL AC+L+GD+++GE + Q
Sbjct: 576 PNEVHYSCIVDLLSRAGRLREAYNLVKSMPSTHSSAAMSALLSACRLYGDTEIGEAIGKQ 635
Query: 298 LFELEPQNAANYILLSNIYAAAERWIDVSLVRSRMRERSVQKIPGCS 344
+ +LEP ++ Y L+SNI A RW +V+ +R+ + + PG S
Sbjct: 636 ILKLEPHSSGPYALVSNICAQGGRWDEVAQIRAMTKNTEFKSTPGYS 682
Score = 115 bits (289), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 88/324 (27%), Positives = 151/324 (46%), Gaps = 48/324 (14%)
Query: 6 VASWNAMLCGFVKDGDLSSARGVFDAMPEKNV---------------------------- 37
V SWNA++ G++++G A +F M +NV
Sbjct: 205 VGSWNALIAGYLRNGQALEAFELFRRMMCRNVLPDLLTLANAIFCCVELNYLRRGMSIHG 264
Query: 38 -----------VSFTTMIDGYAKAGDMAAARFLFEQATEKDVVAWSALISGYVQNGQPNQ 86
V+ T ++D Y K D+ AR LFE+ KD V ++ +++GY++NG P +
Sbjct: 265 YMITMGVELDLVASTALVDLYCKI-DITKARKLFERLGNKDAVVYNVMMTGYLENGLPVE 323
Query: 87 ALKVFLEMESKNVKPDEFILVSLMSATSQLGHLELAQWVDSYVSKSSIDLQQDHVIAALL 146
A+ VF EM N + + ++L+SA S+L + L + + YV + + + + ++
Sbjct: 324 AVNVFREMVKTNASTNVALFLNLISALSKLRDIRLVRSIHGYVLR-HMHITHVEIANQII 382
Query: 147 DMNAKCGNMDRALKLFKEMPKRDLVSYCSMIQGLSIHGCGEDAVRLFNSMLMEGLVPDEV 206
AK G + A ++F M RDLVS+ SMI+G HG + A+ LF + E L D V
Sbjct: 383 HAYAKFGYVVDAREVFNRMRTRDLVSWTSMIKGYVYHGHIDKAIILFRLLQREHLSIDSV 442
Query: 207 AFTIILTACSHSG---LVDEGWNYFQSMKQKYGISPSPDHFACMVDLLSRSGHLGDAYEL 263
+L A S G + E + S + +G S ++ ++ ++ G L A +
Sbjct: 443 TLIGLLQALSQLGCLSFIKEVHCF--SYRFFHGKDLSVNN--SLITTYAKCGKLCTARYI 498
Query: 264 MKSMHEPHAGAWGALLGACKLHGD 287
+ M E +W A++GA +HG+
Sbjct: 499 FQQMTERCLTSWNAMIGAYAMHGN 522
Score = 85.9 bits (211), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 75/299 (25%), Positives = 135/299 (45%), Gaps = 17/299 (5%)
Query: 41 TTMIDGYAKAGDMAAARFLFEQATEKDVVAWSALISGYVQNGQP--NQALKVFLEMESKN 98
+++I Y++ G + A +F++ T KD+ A++++I+ Y +G A M+ +
Sbjct: 71 SSLIRLYSQYGKIKDAHKVFDEITNKDIFAYTSMITAYGHSGGSCVYGAFNTAFIMQQQG 130
Query: 99 VKPDEFILVSLMSATSQLGHLELAQWVDSYVSKSSIDLQQDHVIAALLDMNAKCGNMDRA 158
+ P+ LVSLM A ++L L Q V Y + I L D LLDM KCG + A
Sbjct: 131 MLPNRVTLVSLMHAAAKLRALREGQAVHGYAVRREIGLGDDVFETTLLDMYHKCGGVGLA 190
Query: 159 LKLFKEMPKRDLV---SYCSMIQGLSIHGCGEDAVRLFNSMLMEGLVPDEVAFTIILTAC 215
+F +M R + S+ ++I G +G +A LF M+ ++PD + + C
Sbjct: 191 ASVFAKMDARKMTKVGSWNALIAGYLRNGQALEAFELFRRMMCRNVLPDLLTLANAIFCC 250
Query: 216 SHSGLVDEGWN---YFQSMKQKYGISPSPDHFACMVDLLSRSGHLGDAYELMKSMHEPHA 272
+ G + Y +M + + S +VDL + + A +L + + A
Sbjct: 251 VELNYLRRGMSIHGYMITMGVELDLVAST----ALVDLYCKID-ITKARKLFERLGNKDA 305
Query: 273 GAWGALLGACKLHGDSDLGEIVANQLFELEPQNAA-NYILLSNIYAAAERWIDVSLVRS 330
+ ++ + ++ L N E+ NA+ N L N+ +A + D+ LVRS
Sbjct: 306 VVYNVMMTG---YLENGLPVEAVNVFREMVKTNASTNVALFLNLISALSKLRDIRLVRS 361
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 62/288 (21%), Positives = 122/288 (42%), Gaps = 44/288 (15%)
Query: 1 MPQRNVASWNAMLCGFVKDGDLSSAR-------------------GVFDAMPEKNVVSF- 40
M R++ SW +M+ G+V G + A G+ A+ + +SF
Sbjct: 401 MRTRDLVSWTSMIKGYVYHGHIDKAIILFRLLQREHLSIDSVTLIGLLQALSQLGCLSFI 460
Query: 41 -------------------TTMIDGYAKAGDMAAARFLFEQATEKDVVAWSALISGYVQN 81
++I YAK G + AR++F+Q TE+ + +W+A+I Y +
Sbjct: 461 KEVHCFSYRFFHGKDLSVNNSLITTYAKCGKLCTARYIFQQMTERCLTSWNAMIGAYAMH 520
Query: 82 GQPNQALKVFLEMESKNVKPDEFILVSLMSATSQLGHLELAQWVDSYVSKSSIDLQQDHV 141
G + L++F M++ V PDE S+++A S G +E + + K + +
Sbjct: 521 GNYTEVLELFDHMKAGKVTPDEVTFTSILTACSHSGLVEEGLQIFGIMMKEYAIVPNEVH 580
Query: 142 IAALLDMNAKCGNMDRALKLFKEMP-KRDLVSYCSMIQGLSIHGCGEDAVRLFNSMLMEG 200
+ ++D+ ++ G + A L K MP + +++ ++G E + +L
Sbjct: 581 YSCIVDLLSRAGRLREAYNLVKSMPSTHSSAAMSALLSACRLYGDTEIGEAIGKQIL--K 638
Query: 201 LVPDEVA-FTIILTACSHSGLVDEGWNYFQSMKQKYGISPSPDHFACM 247
L P + ++ C+ G DE ++M + +P + AC+
Sbjct: 639 LEPHSSGPYALVSNICAQGGRWDEVAQ-IRAMTKNTEFKSTPGYSACL 685
>Medtr2g101710.1 | PPR containing plant protein | HC |
chr2:43758970-43756533 | 20130731
Length = 620
Score = 226 bits (576), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 110/312 (35%), Positives = 192/312 (61%), Gaps = 3/312 (0%)
Query: 34 EKNVVSFTTMIDGYAKAGDMAAARFLFEQATEKDVVAWSALISGYVQNGQPNQALKVFLE 93
E+++ +ID YAK G + A +F++ +D V W+++++ Y QNG P++++ + E
Sbjct: 180 ERDLFVGAALIDMYAKCGCVMDAGRVFDKIVVRDAVLWNSMLAAYAQNGHPDESISLCRE 239
Query: 94 MESKNVKPDEFILVSLMSATSQLGHLELAQWVDSYVSKSSIDLQQDHVIAALLDMNAKCG 153
M + V+P E LV+++S+++ + L + + + + D V AL+DM AKCG
Sbjct: 240 MAANGVRPTEATLVTVISSSADVACLPYGREIHGFGWRHGFQ-SNDKVKTALIDMYAKCG 298
Query: 154 NMDRALKLFKEMPKRDLVSYCSMIQGLSIHGCGEDAVRLFNSMLMEGLVPDEVAFTIILT 213
++ AL LF+ + ++ +VS+ ++I G ++HG A+ LF+ M E PD + F +L
Sbjct: 299 SVKVALALFERLREKRVVSWNAIITGYAMHGLAVGALDLFDKMRKEDR-PDHITFVGVLA 357
Query: 214 ACSHSGLVDEGWNYFQSMKQKYGISPSPDHFACMVDLLSRSGHLGDAYELMKSMH-EPHA 272
ACS L+DEG + M + YGI+P+ H+ CM+DLL G L +AY+L+++M +P +
Sbjct: 358 ACSRGRLLDEGRALYNLMVRDYGITPTVQHYTCMIDLLGHCGQLDEAYDLIRNMSVKPDS 417
Query: 273 GAWGALLGACKLHGDSDLGEIVANQLFELEPQNAANYILLSNIYAAAERWIDVSLVRSRM 332
G WGALL +CK+HG+ +L E+ +L ELEP ++ NY++L+N+YA + +W V +R M
Sbjct: 418 GVWGALLNSCKIHGNVELAELALEKLIELEPDDSGNYVILANMYAQSGKWEGVEKLRQVM 477
Query: 333 RERSVQKIPGCS 344
++ ++K CS
Sbjct: 478 IDKRIKKNIACS 489
Score = 100 bits (249), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 68/282 (24%), Positives = 138/282 (48%), Gaps = 7/282 (2%)
Query: 41 TTMIDGYAKAGDMAAARFLFEQATEKDVVAWSALISGYVQNGQPNQALKVFLEMESKNVK 100
T ++ YA + + AR LF++ ++++ W+ LI GY NG + A+ ++ +M ++
Sbjct: 86 TKLVHLYAVSNSLLNARNLFDKIPKQNLFLWNVLIRGYAWNGPHDNAIILYHKMLDYGLR 145
Query: 101 PDEFILVSLMSATSQLGHLELAQWVDSYVSKSSIDLQQDHVIAALLDMNAKCGNMDRALK 160
PD F L ++ A S L + + + YV KS + + V AAL+DM AKCG + A +
Sbjct: 146 PDNFTLPFVLKACSALSAIGEGRSIHEYVIKSGWE-RDLFVGAALIDMYAKCGCVMDAGR 204
Query: 161 LFKEMPKRDLVSYCSMIQGLSIHGCGEDAVRLFNSMLMEGLVPDEVAFTIILTACSHSGL 220
+F ++ RD V + SM+ + +G ++++ L M G+ P E ++++ +
Sbjct: 205 VFDKIVVRDAVLWNSMLAAYAQNGHPDESISLCREMAANGVRPTEATLVTVISSSADVAC 264
Query: 221 VDEGWNYFQSMKQKYGISPSPDHFACMVDLLSRSGHLGDAYELMKSMHEPHAGAWGALLG 280
+ G ++G + ++D+ ++ G + A L + + E +W A++
Sbjct: 265 LPYG-REIHGFGWRHGFQSNDKVKTALIDMYAKCGSVKVALALFERLREKRVVSWNAIIT 323
Query: 281 ACKLHGDSDLGEIVANQLFE-LEPQNAANYILLSNIYAAAER 321
+HG + + A LF+ + ++ ++I + AA R
Sbjct: 324 GYAMHGLA----VGALDLFDKMRKEDRPDHITFVGVLAACSR 361
>Medtr5g098860.1 | PPR containing plant-like protein | HC |
chr5:43289378-43292142 | 20130731
Length = 828
Score = 225 bits (574), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 126/388 (32%), Positives = 214/388 (55%), Gaps = 45/388 (11%)
Query: 1 MPQRNVASWNAMLCGFVKDG----------DLSSARGVFDAMPEKNVVSFTT-------- 42
M +R+ SWN ++ FV++G ++ + + D++ ++S +
Sbjct: 386 MLERDAVSWNTIISAFVQNGFDEEALMLVCEMQKQKFLIDSVTATALLSAASNLRNLYVG 445
Query: 43 --------------------MIDGYAKAGDMAAARFLFEQ--ATEKDVVAWSALISGYVQ 80
+ID YAK+G + A LFEQ ++++D W+A+I+GY Q
Sbjct: 446 KQTHAYLIRRGIQFEGMESYLIDMYAKSGSIRTAELLFEQNCSSDRDQATWNAIIAGYTQ 505
Query: 81 NGQPNQALKVFLEMESKNVKPDEFILVSLMSATSQLGHLELAQWVDSYVSKSSIDLQQDH 140
NG +A+ + +M +NV P+ L S++ A S +G + LA+ + + + ++ + +
Sbjct: 506 NGLNEKAILLLKQMLVQNVIPNAVTLASILPACSSMGSMGLARQLHGFSIRRFLE-KNVY 564
Query: 141 VIAALLDMNAKCGNMDRALKLFKEMPKRDLVSYCSMIQGLSIHGCGEDAVRLFNSMLMEG 200
V +L D +KCG + A +F P+++ V+Y +M+ HG G+ A+ L++SML G
Sbjct: 565 VGTSLTDTYSKCGAISYAENVFLRTPEKNSVTYTTMMMCYGQHGMGKRALTLYDSMLRSG 624
Query: 201 LVPDEVAFTIILTACSHSGLVDEGWNYFQSMKQKYGISPSPDHFACMVDLLSRSGHLGDA 260
+ PD V F IL+AC++SGLVDEG F+SM++ + I PS +H+ C+ D+L R G + +A
Sbjct: 625 IRPDAVTFVAILSACNYSGLVDEGLQIFESMEKVHKIKPSIEHYCCVADMLGRVGRVVEA 684
Query: 261 YELMKSMHEPHAG--AWGALLGACKLHGDSDLGEIVANQLFE--LEPQNAANYILLSNIY 316
YE +K + E WG+LLG+C+ HG +LG+ VA +L ++ + A ++LLSNIY
Sbjct: 685 YEFVKGLGEDANTMEIWGSLLGSCRNHGHFELGKAVAKKLLNMGMDKRMAGYHVLLSNIY 744
Query: 317 AAAERWIDVSLVRSRMRERSVQKIPGCS 344
A W V VR +M+E+ + K GCS
Sbjct: 745 AEEGEWEKVDRVRKQMKEKGLHKETGCS 772
Score = 101 bits (252), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 93/385 (24%), Positives = 172/385 (44%), Gaps = 73/385 (18%)
Query: 1 MPQRNVASWNAMLCGFVKDGDLSSARGVFDAMPEKNV----VSFTTMIDGYAKAGD---- 52
M +RNV +WN ++ FVK A F M ++V V+F + +K GD
Sbjct: 181 MRRRNVVAWNTLILSFVKMNRYPQAVEAFANMINQSVMPSPVTFVNLFPALSKLGDSRTV 240
Query: 53 ---------------------------------MAAARFLFEQATEKDVVAWSALISGYV 79
M AR +F++ K+ W+ +I YV
Sbjct: 241 KMFYGFMRKFGDQYVSDVFVVSSAILMFSDVGCMDYARMVFDRCLNKNTEIWNTMIVAYV 300
Query: 80 QNGQPNQALKVFLE-MESKNVKPDEFILVSLMSATSQLGHLELAQWVDSYVSKSSIDLQQ 138
QN P +A+ VF++ +ES+ D+ L+S+++A SQL ++LA+ ++V K S+
Sbjct: 301 QNNCPVEAIDVFIQALESEEGVCDDVTLLSVLTAVSQLQQIKLAEQFHAFVIK-SLPGSL 359
Query: 139 DHVIAALLDMNAKCGNMDRALKLFKEMPKRDLVSYCSMIQGLSIHGCGEDAVRLFNSMLM 198
++ A++ M ++C ++D +LK+F +M +RD VS+ ++I +G E+A+ L M
Sbjct: 360 IIILNAVMVMYSRCNHVDTSLKVFDKMLERDAVSWNTIISAFVQNGFDEEALMLVCEMQK 419
Query: 199 EGLVPDEVAFTIILTACS-----------HSGLVDEGWNYFQSMKQKYGISPSPDHFACM 247
+ + D V T +L+A S H+ L+ G F+ M+ + +
Sbjct: 420 QKFLIDSVTATALLSAASNLRNLYVGKQTHAYLIRRGIQ-FEGME------------SYL 466
Query: 248 VDLLSRSGHLGDAYELMKS--MHEPHAGAWGALLGACKLHGDSDLGEIVANQLFELEPQN 305
+D+ ++SG + A L + + W A++ +G ++ ++ Q+ QN
Sbjct: 467 IDMYAKSGSIRTAELLFEQNCSSDRDQATWNAIIAGYTQNGLNEKAILLLKQML---VQN 523
Query: 306 A-ANYILLSNIYAAAERWIDVSLVR 329
N + L++I A + L R
Sbjct: 524 VIPNAVTLASILPACSSMGSMGLAR 548
Score = 62.0 bits (149), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 55/250 (22%), Positives = 111/250 (44%), Gaps = 12/250 (4%)
Query: 38 VSFTTMIDGYAKAGDMAAARFLFEQATEKDVVAWSALISGYVQNGQPNQALKVFLEMESK 97
+ + ++++ YA A +F+ ++VVAW+ LI +V+ + QA++ F M ++
Sbjct: 157 IVYNSLLNMYASCQHEYALN-VFDVMRRRNVVAWNTLILSFVKMNRYPQAVEAFANMINQ 215
Query: 98 NVKPDEFILVSLMSATSQLGHLELAQWVDSYVSKSSIDLQQD-HVIAALLDMNAKCGNMD 156
+V P V+L A S+LG + ++ K D V+++ + M + G MD
Sbjct: 216 SVMPSPVTFVNLFPALSKLGDSRTVKMFYGFMRKFGDQYVSDVFVVSSAILMFSDVGCMD 275
Query: 157 RALKLFKEMPKRDLVSYCSMIQGLSIHGCGEDAVRLF-NSMLMEGLVPDEVAFTIILTAC 215
A +F ++ + +MI + C +A+ +F ++ E V D+V +LTA
Sbjct: 276 YARMVFDRCLNKNTEIWNTMIVAYVQNNCPVEAIDVFIQALESEEGVCDDVTLLSVLTAV 335
Query: 216 SHSGLVDEGWNYFQSMKQKYGISPSPDHFACMVD----LLSRSGHLGDAYELMKSMHEPH 271
S + + + I P +++ + SR H+ + ++ M E
Sbjct: 336 SQLQQIKLAEQF-----HAFVIKSLPGSLIIILNAVMVMYSRCNHVDTSLKVFDKMLERD 390
Query: 272 AGAWGALLGA 281
A +W ++ A
Sbjct: 391 AVSWNTIISA 400
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/187 (22%), Positives = 84/187 (44%), Gaps = 6/187 (3%)
Query: 38 VSFTTMIDGYAKAGDMAAARFLFEQATEKDVVAWSALISGYVQNGQPNQALKVFLEMESK 97
S + + + G A L + V W+++I G++ N P+QAL ++ +M S
Sbjct: 50 TSIRSRLSKLCREGQPHLALHLLDSLPRPSTVVWNSVIIGFICNNLPHQALLLYAKMRSN 109
Query: 98 N--VKPDEFILVSLMSATSQLGHLELAQWVDSYVSKSSIDLQQDH---VIAALLDMNAKC 152
+ D + S + A + + + + S+ +S + V +LL+M A C
Sbjct: 110 SSCSTFDPYTFSSTLKACALTKDILTGKAIHSHFLRSHSNTNTGPSRIVYNSLLNMYASC 169
Query: 153 GNMDRALKLFKEMPKRDLVSYCSMIQGLSIHGCGEDAVRLFNSMLMEGLVPDEVAFTIIL 212
+ + AL +F M +R++V++ ++I AV F +M+ + ++P V F +
Sbjct: 170 QH-EYALNVFDVMRRRNVVAWNTLILSFVKMNRYPQAVEAFANMINQSVMPSPVTFVNLF 228
Query: 213 TACSHSG 219
A S G
Sbjct: 229 PALSKLG 235
>Medtr8g096030.1 | PPR containing plant-like protein | HC |
chr8:40057307-40055314 | 20130731
Length = 494
Score = 224 bits (572), Expect = 7e-59, Method: Compositional matrix adjust.
Identities = 115/339 (33%), Positives = 201/339 (59%), Gaps = 7/339 (2%)
Query: 10 NAMLCGFVKDGDLSSARGVFDAMPEKNVVSFTTMIDGYAKAGDMAAARFLFEQATEKDVV 69
N+++ + + ++ A VF +++VS+ MIDG+ K + AR LF++ +++ V
Sbjct: 152 NSLIRVYSVNDRVNDAYKVFCESGYRDIVSYNVMIDGFVKNFKLDRARELFDEMPQRNEV 211
Query: 70 AWSALISGYVQNGQPNQALKVFLEMESKNVKPDEFILVSLMSATSQLGHLELAQWVDSYV 129
W +I+GY Q +A+++F EM PD LVS++SA +QLG LE ++V Y+
Sbjct: 212 TWGTMIAGYSQAKLCREAVELFNEMIGLEFIPDNIALVSVLSACAQLGELEQGRFVHDYI 271
Query: 130 SKSSIDLQQDHVIAALLDMNAKCGNMDRALKLFKEMPKRDLVSYCSMIQGLSIHGCGEDA 189
+++ I + ++ L+D+ AKCG ++ A + F+ +D+ ++ +M+ G +IHG G
Sbjct: 272 TRNGIRVD-SYLTTGLVDLYAKCGCVEIARETFESCTNKDVFTWNAMLVGFAIHGQGLVL 330
Query: 190 VRLFNSMLMEGLVPDEVAFTIILTACSHSGLVDEGWNYFQSMKQKYGISPSPDHFACMVD 249
+ F+ M+ EG+ PD V F +L CSH+GLV E F M+ YG++ H+ CM D
Sbjct: 331 LEYFSRMVGEGIKPDGVTFLGVLVGCSHAGLVCEARKVFDEMETVYGVAREGKHYGCMAD 390
Query: 250 LLSRSGHLGDAYELMKSMHEPHAG---AWGALLGACKLHGDSDLGEIVANQLFELEPQNA 306
+L+R+G + ++ EL+K M P+ G AWG LLG C++HG+ ++ + A Q+ E++P++
Sbjct: 391 MLARAGLIEESRELIKGM--PNGGDVFAWGGLLGGCRIHGNVEIAKQAAQQVMEIKPEDG 448
Query: 307 ANYILLSNIYAAAERWIDVSLVRSRM-RERSVQKIPGCS 344
Y +++NIYA E+W D+ +R + R +KI G S
Sbjct: 449 GVYSVMANIYANTEQWDDLVKIRKSLGANRRAKKITGTS 487
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 75/273 (27%), Positives = 116/273 (42%), Gaps = 31/273 (11%)
Query: 44 IDGYAKAGDMAAARFLFEQATEKDVVAWSALISGYVQNGQPNQALKVFLEMESKNVKPDE 103
I Y+ + A LF ++ LI + P ALK+FL + + D
Sbjct: 54 IKTYSNSFLTTYALSLFNSIPNPTTFTFNTLIRIHTLLSSPLSALKIFLSLRRLFLTLDF 113
Query: 104 FILVSLMSATSQLGHLELAQ-----------WVDSYVSKSSIDLQ--QDHVIAA------ 144
++ A+SQL L LAQ VDS+V S I + D V A
Sbjct: 114 HTFPLILKASSQLHSLSLAQSLHSQVFKYGFLVDSFVMNSLIRVYSVNDRVNDAYKVFCE 173
Query: 145 -----------LLDMNAKCGNMDRALKLFKEMPKRDLVSYCSMIQGLSIHGCGEDAVRLF 193
++D K +DRA +LF EMP+R+ V++ +MI G S +AV LF
Sbjct: 174 SGYRDIVSYNVMIDGFVKNFKLDRARELFDEMPQRNEVTWGTMIAGYSQAKLCREAVELF 233
Query: 194 NSMLMEGLVPDEVAFTIILTACSHSGLVDEGWNYFQSMKQKYGISPSPDHFACMVDLLSR 253
N M+ +PD +A +L+AC+ G +++G + + GI +VDL ++
Sbjct: 234 NEMIGLEFIPDNIALVSVLSACAQLGELEQG-RFVHDYITRNGIRVDSYLTTGLVDLYAK 292
Query: 254 SGHLGDAYELMKSMHEPHAGAWGALLGACKLHG 286
G + A E +S W A+L +HG
Sbjct: 293 CGCVEIARETFESCTNKDVFTWNAMLVGFAIHG 325
>Medtr3g111500.1 | PPR containing plant-like protein | HC |
chr3:52097450-52094882 | 20130731
Length = 524
Score = 224 bits (570), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 117/319 (36%), Positives = 194/319 (60%), Gaps = 7/319 (2%)
Query: 16 FVKDGDLSSARGVFDAMPEKNVVSFTTMIDGYAKAGDMAAARFLFEQATEKDVVAWSALI 75
F K G + AR VFD +NVV +T+++ GY G + R +F++ +++ + SA++
Sbjct: 150 FSKHGAIHLARQVFDESSNRNVVCWTSLVSGYCSCGLVNEVRDVFDKMPQRNEASNSAMV 209
Query: 76 SGYVQNGQPNQALKVFLEMESKN-----VKPDEFILVSLMSATSQLGHLELAQWVDSYVS 130
SGYV+N ++ +++F E++ K+ VK + +LVS+++A + +G E +W+ SYV
Sbjct: 210 SGYVRNSFFSEGVQLFRELKKKDKGRARVKFNGALLVSVLNACTVMGAFEEGKWIHSYVE 269
Query: 131 KSSIDLQQDHVIAALLDMNAKCGNMDRALKLFKEMPKRDLVSYCSMIQGLSIHGCGEDAV 190
++ ++ + + AL+D AKCG + A K+F +M +D+ ++ +MI GL+I+G + A+
Sbjct: 270 ENGLEYDLE-LGTALIDFYAKCGWVKDAEKVFDKMLVKDVATWSAMILGLAINGNNKMAL 328
Query: 191 RLFNSMLMEGLVPDEVAFTIILTACSHSGLVDEGWNYFQSMKQKYGISPSPDHFACMVDL 250
LF M G P+EV F +LTAC+H L E F M +KY I+PS +H+ C+VD+
Sbjct: 329 ELFEKMEKVGPKPNEVTFVGVLTACNHKSLFGESSRLFGIMSEKYNITPSIEHYGCIVDI 388
Query: 251 LSRSGHLGDAYELMKSMH-EPHAGAWGALLGACKLHGDSDLGEIVANQLFELEPQNAANY 309
L+RSG + A + SMH EP WG+LL C +HG +LG+ V L E +P+++ Y
Sbjct: 389 LARSGQVKKALIFINSMHIEPDGAIWGSLLNGCLMHGHYELGQKVGKYLIEFDPEHSGRY 448
Query: 310 ILLSNIYAAAERWIDVSLV 328
+LL+N+YA +W VS V
Sbjct: 449 VLLANMYANMGKWEGVSEV 467
Score = 65.5 bits (158), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 62/288 (21%), Positives = 126/288 (43%), Gaps = 18/288 (6%)
Query: 20 GDLSSARGVFDAMPEKNVVSFTTMIDGYAKAGDMAAARFLFEQATEKDVVAWSALISGYV 79
GD A +F MP N+ + ++I Y + +F + ++ S + V
Sbjct: 56 GDFRYAETLFTHMPNPNIFDYNSIITSYTTNSQFDKSLSVFTKMLNMNIRPNSHTFTTLV 115
Query: 80 QNGQPNQAL-KVF-LEMESKNVKPDEFILVSLMSATSQLGHLELAQWVDSYVSKSSIDLQ 137
++ +L +VF L M+S N D + + S+++ S+ G + LA+ V S ++
Sbjct: 116 KSCVTLSSLEQVFTLTMKSGN-SSDVYFVSSVINVFSKHGAIHLARQVFDESSNRNVVCW 174
Query: 138 QDHVIAALLDMNAKCGNMDRALKLFKEMPKRDLVSYCSMIQGLSIHGCGEDAVRLFNSML 197
+L+ CG ++ +F +MP+R+ S +M+ G + + V+LF +
Sbjct: 175 -----TSLVSGYCSCGLVNEVRDVFDKMPQRNEASNSAMVSGYVRNSFFSEGVQLFRELK 229
Query: 198 MEGLVPDEVAF-----TIILTACSHSGLVDEGWNYFQSMKQKYGISPSPDHFACMVDLLS 252
+ V F +L AC+ G +EG + S ++ G+ + ++D +
Sbjct: 230 KKDKGRARVKFNGALLVSVLNACTVMGAFEEG-KWIHSYVEENGLEYDLELGTALIDFYA 288
Query: 253 RSGHLGDAYELMKSMHEPHAGAWGALLGACKLHGDSDLGEIVANQLFE 300
+ G + DA ++ M W A++ ++G++ + A +LFE
Sbjct: 289 KCGWVKDAEKVFDKMLVKDVATWSAMILGLAINGNNKM----ALELFE 332
>Medtr7g053240.1 | pentatricopeptide (PPR) repeat protein | HC |
chr7:18723182-18719939 | 20130731
Length = 881
Score = 223 bits (569), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 120/311 (38%), Positives = 187/311 (60%), Gaps = 4/311 (1%)
Query: 36 NVVSFTTMIDGYAKAGDMAAARFLFEQATEKDVVAWSALISGYVQNGQPNQALKVFLEME 95
N V +++ Y+K G ++ AR +F+ KD A S+L+SGY QNG ++ +F +M
Sbjct: 571 NTVVGGALVNMYSKCGSLSLARKVFDILPHKDAFACSSLVSGYAQNGLIEESFLLFHDML 630
Query: 96 SKNVKPDEFILVSLMSATSQLGHLELAQWVDSYVSKSSIDLQQD-HVIAALLDMNAKCGN 154
+ D F + S++ A S L ++ + +Y+ K + LQ D V ++LL M +KCG+
Sbjct: 631 RNDETVDAFTITSILGAASLLCQSDIGTQLHAYIEK--LGLQADVSVGSSLLTMYSKCGS 688
Query: 155 MDRALKLFKEMPKRDLVSYCSMIQGLSIHGCGEDAVRLFNSMLMEGLVPDEVAFTIILTA 214
++ K F ++ K DL+ + S+I + HG G DA+ + M EG+ PD V F IL+A
Sbjct: 689 IEDCRKAFDDVEKPDLIGWTSLILSYAQHGKGADALAAYELMKSEGVEPDAVTFVGILSA 748
Query: 215 CSHSGLVDEGWNYFQSMKQKYGISPSPDHFACMVDLLSRSGHLGDAYELMKSMH-EPHAG 273
CSHSGLV+E + Y SM + Y I+PS H+AC+VD+L RSG L +A + +M EP+A
Sbjct: 749 CSHSGLVEEAFFYLNSMIEDYKITPSHRHYACIVDILGRSGRLREAESFINNMPVEPNAL 808
Query: 274 AWGALLGACKLHGDSDLGEIVANQLFELEPQNAANYILLSNIYAAAERWIDVSLVRSRMR 333
WG LL ACK+HGD +LG++ A ++ LEP + Y+ SNI A E+W +V+ +RS +
Sbjct: 809 IWGTLLAACKVHGDFELGKLAAEKVMGLEPSDVGAYVSFSNICADGEQWEEVTKIRSSLN 868
Query: 334 ERSVQKIPGCS 344
+ ++K P S
Sbjct: 869 KTGMKKEPAWS 879
Score = 110 bits (275), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 70/241 (29%), Positives = 127/241 (52%), Gaps = 4/241 (1%)
Query: 47 YAKAGDMAAARFLFEQATEKDVVAWSALISGYVQNGQPNQALKVFLEMESKNVKPDEFIL 106
Y+K G + + +F+QA KD V+W+++ISG+V++G P+QAL++F EM + V PD L
Sbjct: 481 YSKCGCLEESYEVFQQAIVKDNVSWASMISGFVEHGYPDQALRLFKEMLYQEVVPDHITL 540
Query: 107 VSLMSATSQLGHLELAQWVDSYVSKSSIDLQQDHVI-AALLDMNAKCGNMDRALKLFKEM 165
+S+++A + L L + + S + L + V+ AL++M +KCG++ A K+F +
Sbjct: 541 ISILTACADLRLLRTGREIHG--STFRLGLGTNTVVGGALVNMYSKCGSLSLARKVFDIL 598
Query: 166 PKRDLVSYCSMIQGLSIHGCGEDAVRLFNSMLMEGLVPDEVAFTIILTACSHSGLVDEGW 225
P +D + S++ G + +G E++ LF+ ML D T IL A S D G
Sbjct: 599 PHKDAFACSSLVSGYAQNGLIEESFLLFHDMLRNDETVDAFTITSILGAASLLCQSDIG- 657
Query: 226 NYFQSMKQKYGISPSPDHFACMVDLLSRSGHLGDAYELMKSMHEPHAGAWGALLGACKLH 285
+ +K G+ + ++ + S+ G + D + + +P W +L+ + H
Sbjct: 658 TQLHAYIEKLGLQADVSVGSSLLTMYSKCGSIEDCRKAFDDVEKPDLIGWTSLILSYAQH 717
Query: 286 G 286
G
Sbjct: 718 G 718
Score = 104 bits (259), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 99/365 (27%), Positives = 158/365 (43%), Gaps = 78/365 (21%)
Query: 1 MPQRNVASWNAMLCGFVKDGDLSSARGVFDAM---------------------PEK---- 35
M +NV SW A++ GFV+ D + A +F M PE
Sbjct: 297 MQVQNVVSWTAIISGFVQQDDTTFALKLFKDMRQIGHEINAYTVTSVLSACAKPELIEEA 356
Query: 36 --------------NVVSFTTMIDGYAKAGDMAAARFLF-EQATEKDVVAWSALISGYVQ 80
NV +++ YAK G + + F E KD W++++S + Q
Sbjct: 357 KQIHSLVLKLGLILNVKVGAALVNMYAKIGGVGLSELAFSEMKNMKDPGIWASMLSSFAQ 416
Query: 81 NGQPNQALKVFLEMESKNVKPDEFILVSLMSATSQLGHLELAQWVDSYVSKSSIDLQQDH 140
N +AL++F M + VKPDE+ + SL+S S L L V SY+ K+ + +
Sbjct: 417 NRNSGRALELFTVMLREGVKPDEYCIGSLLSIMSSL---SLGSQVHSYILKAGL-VTNAT 472
Query: 141 VIAALLDMNAKCGNMDRALKLFKEMPKRDLVSYCSMIQGLSIHGCGEDAVRLFNSMLMEG 200
V +L M +KCG ++ + ++F++ +D VS+ SMI G HG + A+RLF ML +
Sbjct: 473 VGCSLFTMYSKCGCLEESYEVFQQAIVKDNVSWASMISGFVEHGYPDQALRLFKEMLYQE 532
Query: 201 LVPDEVAFTIILTACSHSGLVDEGWNYFQSM----------------------------K 232
+VPD + ILTAC+ L+ G S +
Sbjct: 533 VVPDHITLISILTACADLRLLRTGREIHGSTFRLGLGTNTVVGGALVNMYSKCGSLSLAR 592
Query: 233 QKYGISPSPDHFAC--MVDLLSRSGHLGDAYELMKSM----HEPHAGAWGALLGACKLHG 286
+ + I P D FAC +V +++G + +++ L M A ++LGA L
Sbjct: 593 KVFDILPHKDAFACSSLVSGYAQNGLIEESFLLFHDMLRNDETVDAFTITSILGAASLLC 652
Query: 287 DSDLG 291
SD+G
Sbjct: 653 QSDIG 657
Score = 94.4 bits (233), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 70/243 (28%), Positives = 117/243 (48%), Gaps = 13/243 (5%)
Query: 42 TMIDGYAKAGDMAAARFLFEQATEKDVVAWSALISGYVQNGQPNQALKVFLEMESKNVKP 101
++I Y K+ DM A LF+ T+ +V+W+ +ISGYV+N ++L++F M +P
Sbjct: 75 SLIGLYCKSSDMVLAHKLFDTITQPSIVSWNVMISGYVRNSMFLKSLEMFCRMHLFGFEP 134
Query: 102 DEFILVSLMSATSQLGHLELAQWVDSYVSKSSIDLQQDHVIAALLDMNAKCGNMDRALKL 161
DEF S++SA L V S V K+ L +V ++DM K N AL+
Sbjct: 135 DEFSYGSVLSACVALQASMFGLQVFSLVVKNGF-LSSGYVQTQMVDMFCKNCNFSEALRF 193
Query: 162 FKEMPKRDLVSYCSMIQGLSIHGCGEDAVRLFNSMLMEGLVPDEVAFTIILTACSHSGLV 221
F + ++ S+ ++I +G + A+ LF+ M L+P+ F ILTAC
Sbjct: 194 FNDASCDNVASWNAIISLAVKNGENQVALNLFSEMCRASLMPNSYTFPSILTACC----- 248
Query: 222 DEGWNYFQSMKQKYGIS---PSPDHF--ACMVDLLSRSGHLGDAYELMKSMHEPHAGAWG 276
Q K +G++ + D F +VDL ++ G + +AY M + +W
Sbjct: 249 --ALKEMQIGKGVHGLAIKCGATDVFVETAIVDLYAKFGCMSEAYRQFSQMQVQNVVSWT 306
Query: 277 ALL 279
A++
Sbjct: 307 AII 309
Score = 92.0 bits (227), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 67/245 (27%), Positives = 126/245 (51%), Gaps = 10/245 (4%)
Query: 41 TTMIDGYAKAGDMAAARFLFEQATEKDVVAWSALISGYVQNGQPNQALKVFLEMESKNVK 100
T M+D + K + + A F A+ +V +W+A+IS V+NG+ AL +F EM ++
Sbjct: 175 TQMVDMFCKNCNFSEALRFFNDASCDNVASWNAIISLAVKNGENQVALNLFSEMCRASLM 234
Query: 101 PDEFILVSLMSATSQLGHLELAQWVDSYVSK-SSIDLQQDHVIAALLDMNAKCGNMDRAL 159
P+ + S+++A L +++ + V K + D+ V A++D+ AK G M A
Sbjct: 235 PNSYTFPSILTACCALKEMQIGKGVHGLAIKCGATDV---FVETAIVDLYAKFGCMSEAY 291
Query: 160 KLFKEMPKRDLVSYCSMIQGLSIHGCGEDAVRLFNSMLMEGLVPDEVAFTIILTACSHSG 219
+ F +M +++VS+ ++I G A++LF M G + T +L+AC+
Sbjct: 292 RQFSQMQVQNVVSWTAIISGFVQQDDTTFALKLFKDMRQIGHEINAYTVTSVLSACAKPE 351
Query: 220 LVDEGWNYFQSMKQKYGISPSPDHFACMVDLLSRSGHLG---DAYELMKSMHEPHAGAWG 276
L++E S+ K G+ + A +V++ ++ G +G A+ MK+M +P G W
Sbjct: 352 LIEEA-KQIHSLVLKLGLILNVKVGAALVNMYAKIGGVGLSELAFSEMKNMKDP--GIWA 408
Query: 277 ALLGA 281
++L +
Sbjct: 409 SMLSS 413
Score = 88.6 bits (218), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 98/367 (26%), Positives = 164/367 (44%), Gaps = 53/367 (14%)
Query: 5 NVASWNAMLCGFVKDGDLSSARGVFDAMPEK----NVVSF-------------------- 40
NVASWNA++ VK+G+ A +F M N +F
Sbjct: 201 NVASWNAIISLAVKNGENQVALNLFSEMCRASLMPNSYTFPSILTACCALKEMQIGKGVH 260
Query: 41 --------------TTMIDGYAKAGDMAAARFLFEQATEKDVVAWSALISGYVQNGQPNQ 86
T ++D YAK G M+ A F Q ++VV+W+A+ISG+VQ
Sbjct: 261 GLAIKCGATDVFVETAIVDLYAKFGCMSEAYRQFSQMQVQNVVSWTAIISGFVQQDDTTF 320
Query: 87 ALKVFLEMESKNVKPDEFILVSLMSATSQLGHLELAQWVDSYVSKSSIDLQQDHVIAALL 146
ALK+F +M + + + + S++SA ++ +E A+ + S V K + L V AAL+
Sbjct: 321 ALKLFKDMRQIGHEINAYTVTSVLSACAKPELIEEAKQIHSLVLKLGLILNVK-VGAALV 379
Query: 147 DMNAKCGNMDRALKLFKEMPK-RDLVSYCSMIQGLSIHGCGEDAVRLFNSMLMEGLVPDE 205
+M AK G + + F EM +D + SM+ + + A+ LF ML EG+ PDE
Sbjct: 380 NMYAKIGGVGLSELAFSEMKNMKDPGIWASMLSSFAQNRNSGRALELFTVMLREGVKPDE 439
Query: 206 VAFTIILTACSHSGLVDEGWNYFQSMKQKYGISPSPDHFACMVDLLSRSGHLGDAYELMK 265
+L+ S L + +Y K G+ + + + S+ G L ++YE+ +
Sbjct: 440 YCIGSLLSIMSSLSLGSQVHSYI----LKAGLVTNATVGCSLFTMYSKCGCLEESYEVFQ 495
Query: 266 SMHEPHAGAWGALLGACKLHGDSDLGEIVANQLFE--LEPQNAANYILLSNIYAAAERWI 323
+W +++ HG D A +LF+ L + ++I L +I A
Sbjct: 496 QAIVKDNVSWASMISGFVEHGYPD----QALRLFKEMLYQEVVPDHITLISILTACA--- 548
Query: 324 DVSLVRS 330
D+ L+R+
Sbjct: 549 DLRLLRT 555
>Medtr1g073160.1 | PPR containing plant-like protein | HC |
chr1:32444344-32441927 | 20130731
Length = 627
Score = 223 bits (569), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 116/310 (37%), Positives = 193/310 (62%), Gaps = 10/310 (3%)
Query: 41 TTMIDGYAKAGDMAAARFLFEQATEKDVVAWSALISGYVQNGQPNQALKVFLEMESKN-V 99
+++ID Y+++ + +R +F+Q +++ W+A+I+GYVQNG P AL +F EM+ K+ +
Sbjct: 276 SSLIDMYSRSNKLVLSRRVFDQMKSRNIYVWTAMINGYVQNGAPEGALILFREMQRKDRI 335
Query: 100 KPDEFILVSLMSATSQLGHLELAQWVDSYVSKSSIDLQQDHVIA---ALLDMNAKCGNMD 156
+P+ LVS++ A L L + V ++ SI ++ + I+ AL+DM AKCG++D
Sbjct: 336 RPNRVSLVSVLPACGLLVGLMGGKQVHAF----SIKMEFNDYISLRNALIDMYAKCGSLD 391
Query: 157 RALKLFKEMP-KRDLVSYCSMIQGLSIHGCGEDAVRLFNSMLMEGLVPDEVAFTIILTAC 215
A ++F +D +++ S+I +HG G++A+ + ML +G+ PD + +L+AC
Sbjct: 392 YARRVFDNGSYSKDAITWSSIISAYGLHGKGQEALTTYYEMLQQGIKPDMITVVGVLSAC 451
Query: 216 SHSGLVDEGWNYFQSMKQKYGISPSPDHFACMVDLLSRSGHLGDAYELMKSMH-EPHAGA 274
SGLVDEG + + S+ +Y + PS + C+VDLL RSG L A + ++ M P
Sbjct: 452 CRSGLVDEGISIYNSLTTEYEMKPSVEICGCVVDLLGRSGQLDQALDFIREMPIIPGPSV 511
Query: 275 WGALLGACKLHGDSDLGEIVANQLFELEPQNAANYILLSNIYAAAERWIDVSLVRSRMRE 334
WG+LL A +HG+S ++ L ELEP+N +NYI LSN YA++ RW +++ VRS M+E
Sbjct: 512 WGSLLTASVIHGNSMTRDLAYRCLLELEPENPSNYISLSNTYASSRRWDEITEVRSMMKE 571
Query: 335 RSVQKIPGCS 344
R ++K+PG S
Sbjct: 572 RGLRKVPGIS 581
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 64/257 (24%), Positives = 118/257 (45%), Gaps = 13/257 (5%)
Query: 35 KNVVSFTTMIDGYAKAGDMAAARFLFEQATEKDVVAWSALISGYVQNGQPNQALKVFLEM 94
+N T +I YA GD ++ +F+ K+V W++LI+GYV+N Q + A+ +F +M
Sbjct: 59 QNAFLTTRLISAYATFGDSIMSKLVFDSVHTKNVYLWNSLINGYVKNHQFDNAIVLFRQM 118
Query: 95 ESKNVKPDEFILVSLMSATSQLGHLELAQWVDSYVSKSSIDLQQDHVIA-ALLDMNAKCG 153
+ + PD++ L ++ + ++ L L + + I D V+ +++ M +C
Sbjct: 119 -GRCLLPDDYTLATISKVSGEIQDLVLGKLIHG--KSLRIGFVSDIVVGNSVMSMYIRCR 175
Query: 154 NMDRALKLFKEMPKRDLVSYCSMIQGLSIHGCGE-----DAVRLFNSMLMEGLVPDEVAF 208
A+K+F EMP+R++ S+ +I G + G + D F M +G D
Sbjct: 176 EFGDAMKVFDEMPQRNVGSFNVIISGCAALGNLDYSLYADLWNFFRRMQCQGYNADAFTV 235
Query: 209 TIILTACSHS-GLVDEGWN-YFQSMKQKYGISPSPD-HF-ACMVDLLSRSGHLGDAYELM 264
+L C S G D G + +K + D H + ++D+ SRS L + +
Sbjct: 236 ASLLPMCCDSDGKFDHGRELHCYLVKNGLDLKMCSDVHMGSSLIDMYSRSNKLVLSRRVF 295
Query: 265 KSMHEPHAGAWGALLGA 281
M + W A++
Sbjct: 296 DQMKSRNIYVWTAMING 312
>Medtr4g074470.1 | PPR containing plant-like protein | HC |
chr4:28370337-28367680 | 20130731
Length = 542
Score = 223 bits (568), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 126/346 (36%), Positives = 198/346 (57%), Gaps = 5/346 (1%)
Query: 5 NVASWNAMLCGFVKDGDLSSARGVFDAMPEKNVVSFTTMIDGYAKAGDMAAARFLFEQAT 64
++ SWN M+ + D SA + + MP K VVS+ T+I Y + GD+ AAR +F
Sbjct: 189 SLVSWNIMISAYDLVNDYESADYLLELMPCKTVVSWNTLIARYIRLGDVQAARRVFGCMP 248
Query: 65 EKDVVAWSALISGYVQNGQPNQALKVFLEMESKNVKPDEFILVSLMSATSQLGHLELAQW 124
E++ V+W+++I+G V AL++F EM++ VKP E L+S++ A ++ G LE+
Sbjct: 249 ERNAVSWNSMIAGCVSVRDYAGALELFSEMQNAGVKPTEVTLISILGACAETGALEIGHK 308
Query: 125 VDSYVSKSSIDLQQDHVIAALLDMNAKCGNMDRALKLFKEMPKRDLVSYCSMIQGLSIHG 184
+ + + + ++ AL++M KCGN+ A ++F M + + + +M+ GL++HG
Sbjct: 309 IYESLKVCEHKI-ESYLGNALVNMYCKCGNLSLAWEIFNGMKMKTVSCWNAMVIGLAVHG 367
Query: 185 CGEDAVRLFNSM---LMEGLVPDEVAFTIILTACSHSGLVDEGWNYFQSMKQKYGISPSP 241
E+ +LF M L + PD V F +L ACSH GLVD+ YF M ++Y I P
Sbjct: 368 YCEEVFQLFTEMEESLGGSIRPDRVTFIGVLVACSHKGLVDKARWYFDHMVKRYKIVPDS 427
Query: 242 DHFACMVDLLSRSGHLGDAYE-LMKSMHEPHAGAWGALLGACKLHGDSDLGEIVANQLFE 300
H+ CMVDLLSR G L +AY+ +M + + W LLGAC+ +++L EI QL +
Sbjct: 428 KHYGCMVDLLSRWGLLEEAYQIIMTAPFQNSVVLWRTLLGACRTQSNTELAEISFKQLAK 487
Query: 301 LEPQNAANYILLSNIYAAAERWIDVSLVRSRMRERSVQKIPGCSKL 346
L+ +Y+LLSNIYA A RW +V +RS M V + G S++
Sbjct: 488 LKQLIDGDYVLLSNIYAEAGRWDEVERLRSEMDYLHVPRQAGYSQI 533
>Medtr5g024360.1 | PPR containing plant-like protein | HC |
chr5:9808546-9804666 | 20130731
Length = 611
Score = 223 bits (568), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 124/315 (39%), Positives = 191/315 (60%), Gaps = 6/315 (1%)
Query: 36 NVVSFTTMIDGYAKAGDMAAARFLFEQATEKDVVAWSALISGYVQNGQPNQALKVFLEME 95
NV+ T +++ YAK G + AR LF + E+++VAW+ +I+ Y Q + N+AL +F M
Sbjct: 249 NVILATAIVEMYAKCGWLNVARELFNKMPERNIVAWNCMINAYNQYERYNEALGLFFYML 308
Query: 96 SKNVKPDEFILVSLMSATSQLGHLELAQWVDSYVSKSSIDLQQDHVIA-ALLDMNAKCGN 154
+ PD+ +S++S ++ L L + V +Y+ KS ++ +D +A ALLDM AK G
Sbjct: 309 ANGFCPDKATFLSVLSVCARRCVLALGETVHAYLLKS--NMAKDIALATALLDMYAKNGE 366
Query: 155 MDRALKLFKE-MPKRDLVSYCSMIQGLSIHGCGEDAVRLFNSMLMEG-LVPDEVAFTIIL 212
+ A K+F + K+D+V + SMI L+IHG G +A+ LF M + LVPD + + +L
Sbjct: 367 LGSAQKIFNNSLEKKDVVMWTSMINALAIHGHGNEALSLFQIMQEDSSLVPDHITYIGVL 426
Query: 213 TACSHSGLVDEGWNYFQSMKQKYGISPSPDHFACMVDLLSRSGHLGDAYELMKSMH-EPH 271
ACSH GLV+E F M + YGI P +H++CMVDLLSR+GH +A +LM++M P+
Sbjct: 427 FACSHVGLVEEAQKQFNLMTKSYGILPEKEHYSCMVDLLSRAGHFREAEKLMETMSIRPN 486
Query: 272 AGAWGALLGACKLHGDSDLGEIVANQLFELEPQNAANYILLSNIYAAAERWIDVSLVRSR 331
WGALL C++H + + V +L ELEP + Y LLSNIYA + +W +V+ R
Sbjct: 487 IAIWGALLNGCQIHENIPVASQVKVRLAELEPIQSGIYALLSNIYANSGKWEEVNRTRKM 546
Query: 332 MRERSVQKIPGCSKL 346
M+ + + K G S +
Sbjct: 547 MKHKRIAKTIGHSSV 561
Score = 121 bits (304), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 74/263 (28%), Positives = 141/263 (53%), Gaps = 8/263 (3%)
Query: 34 EKNVVSFTTMIDGYAKAGDMAAARFLFEQATEKDVVAWSALISGYVQNGQPNQALKVFLE 93
E NV T +++ Y + +M + +F++ + +VVAW+ LI+GYV N QP +AL+VF E
Sbjct: 139 EANVYVATGLLNMYVECKNMESGLKVFDKIPKWNVVAWTCLINGYVINDQPREALEVFKE 198
Query: 94 MESKNVKPDEFILVSLMSATSQLGHLELAQWVDSYVSKSSID----LQQDHVI--AALLD 147
M V+ +E +V+ + A ++ ++ +WV V K+ D +VI A+++
Sbjct: 199 MGRWGVEANEVTMVNALIACARCRDVDTGRWVHERVCKAGYDPFVFASNSNVILATAIVE 258
Query: 148 MNAKCGNMDRALKLFKEMPKRDLVSYCSMIQGLSIHGCGEDAVRLFNSMLMEGLVPDEVA 207
M AKCG ++ A +LF +MP+R++V++ MI + + +A+ LF ML G PD+
Sbjct: 259 MYAKCGWLNVARELFNKMPERNIVAWNCMINAYNQYERYNEALGLFFYMLANGFCPDKAT 318
Query: 208 FTIILTACSHSGLVDEGWNYFQSMKQKYGISPSPDHFACMVDLLSRSGHLGDAYELM-KS 266
F +L+ C+ ++ G + K ++ ++D+ +++G LG A ++ S
Sbjct: 319 FLSVLSVCARRCVLALG-ETVHAYLLKSNMAKDIALATALLDMYAKNGELGSAQKIFNNS 377
Query: 267 MHEPHAGAWGALLGACKLHGDSD 289
+ + W +++ A +HG +
Sbjct: 378 LEKKDVVMWTSMINALAIHGHGN 400
Score = 92.4 bits (228), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 65/236 (27%), Positives = 111/236 (47%), Gaps = 15/236 (6%)
Query: 56 ARFLFEQATEKDVVAWSALISGYVQNGQPNQALKVFLEMESKNVKPDEFILVSLMSATSQ 115
A LF Q +V ++++I GY ++ P +L ++ +M PD F ++ A S
Sbjct: 60 ANLLFRQIHSPNVYIFNSMIKGYAKSNNPTMSLHLYKQMLQNGYSPDHFTFPFVLKACSF 119
Query: 116 LGHLELAQWVDSYVSKSSIDLQQDHVIAALLDMNAKCGNMDRALKLFKEMPKRDLVSYCS 175
+ + V S + KS + +V LL+M +C NM+ LK+F ++PK ++V++
Sbjct: 120 IYDQVSGKCVHSCILKSGFE-ANVYVATGLLNMYVECKNMESGLKVFDKIPKWNVVAWTC 178
Query: 176 MIQGLSIHGCGEDAVRLFNSMLMEGLVPDEVAFTIILTACSHSGLVDEG-WNYFQSMKQK 234
+I G I+ +A+ +F M G+ +EV L AC+ VD G W + + K
Sbjct: 179 LINGYVINDQPREALEVFKEMGRWGVEANEVTMVNALIACARCRDVDTGRWVHERVCKAG 238
Query: 235 YGISPSPDHFA---------CMVDLLSRSGHLGDAYELMKSMHEPHAGAWGALLGA 281
Y P FA +V++ ++ G L A EL M E + AW ++ A
Sbjct: 239 Y----DPFVFASNSNVILATAIVEMYAKCGWLNVARELFNKMPERNIVAWNCMINA 290
Score = 75.5 bits (184), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 56/225 (24%), Positives = 107/225 (47%), Gaps = 42/225 (18%)
Query: 1 MPQRNVASWNAMLCGFVKDGDLSSARGVFDAM------PE-------------------- 34
MP+RN+ +WN M+ + + + A G+F M P+
Sbjct: 276 MPERNIVAWNCMINAYNQYERYNEALGLFFYMLANGFCPDKATFLSVLSVCARRCVLALG 335
Query: 35 -------------KNVVSFTTMIDGYAKAGDMAAARFLFEQATE-KDVVAWSALISGYVQ 80
K++ T ++D YAK G++ +A+ +F + E KDVV W+++I+
Sbjct: 336 ETVHAYLLKSNMAKDIALATALLDMYAKNGELGSAQKIFNNSLEKKDVVMWTSMINALAI 395
Query: 81 NGQPNQALKVFLEM-ESKNVKPDEFILVSLMSATSQLGHLELAQWVDSYVSKSSIDLQQD 139
+G N+AL +F M E ++ PD + ++ A S +G +E AQ + ++KS L +
Sbjct: 396 HGHGNEALSLFQIMQEDSSLVPDHITYIGVLFACSHVGLVEEAQKQFNLMTKSYGILPEK 455
Query: 140 HVIAALLDMNAKCGNMDRALKLFKEMPKR-DLVSYCSMIQGLSIH 183
+ ++D+ ++ G+ A KL + M R ++ + +++ G IH
Sbjct: 456 EHYSCMVDLLSRAGHFREAEKLMETMSIRPNIAIWGALLNGCQIH 500
>Medtr4g108030.1 | PPR containing plant-like protein | HC |
chr4:44776233-44777913 | 20130731
Length = 544
Score = 223 bits (567), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 123/346 (35%), Positives = 198/346 (57%), Gaps = 5/346 (1%)
Query: 5 NVASWNAMLCGFVKDGDLSSARGVFDAMPEKNVVSFTTMIDGYAKAGDMAAARFLFEQAT 64
++ SWN M+ + + D A + + MP K V+S+ T+I Y + GD+ AAR +F
Sbjct: 191 SLVSWNIMISAYDRVDDYELADHLLELMPCKTVISWNTLIARYIRLGDVQAARRVFGCMP 250
Query: 65 EKDVVAWSALISGYVQNGQPNQALKVFLEMESKNVKPDEFILVSLMSATSQLGHLELAQW 124
E++ V+W+++I+G V AL++F EM++ VKP E L+S++ A ++ G LE+
Sbjct: 251 ERNAVSWNSMIAGCVSVRDYAGALELFSEMQNAGVKPTEVTLISILGACAETGALEIGHK 310
Query: 125 VDSYVSKSSIDLQQDHVIAALLDMNAKCGNMDRALKLFKEMPKRDLVSYCSMIQGLSIHG 184
+ + + + ++ AL++M KCGN+ A ++F M + + + +M+ GL++HG
Sbjct: 311 IYESLKVCEHKI-ESYLGNALVNMYCKCGNLSLAWEIFNGMKMKTVSCWNAMVIGLAVHG 369
Query: 185 CGEDAVRLFNSM---LMEGLVPDEVAFTIILTACSHSGLVDEGWNYFQSMKQKYGISPSP 241
E+ +LF M L + PD V F +L ACSH GLVD+ YF M ++Y I P
Sbjct: 370 YCEEVFQLFTEMEESLGGSIRPDRVTFIGVLVACSHKGLVDKARWYFDHMVKRYKIVPDS 429
Query: 242 DHFACMVDLLSRSGHLGDAYE-LMKSMHEPHAGAWGALLGACKLHGDSDLGEIVANQLFE 300
H+ CMVDLL+R G L +AY+ +M + + W LLGAC+ +++L EI QL +
Sbjct: 430 KHYGCMVDLLTRRGLLEEAYQIIMTAPFQNSVVLWRTLLGACRTQSNTELAEISFKQLAK 489
Query: 301 LEPQNAANYILLSNIYAAAERWIDVSLVRSRMRERSVQKIPGCSKL 346
L+ +Y+LLSNIYA A RW +V +RS M V + G S++
Sbjct: 490 LKQLIDGDYVLLSNIYAEAGRWDEVERLRSEMDYLHVPRQAGYSQI 535
>Medtr4g011730.1 | PPR containing plant-like protein | HC |
chr4:2939745-2937455 | 20130731
Length = 706
Score = 223 bits (567), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 121/338 (35%), Positives = 208/338 (61%), Gaps = 14/338 (4%)
Query: 18 KDGDLSSARGVFDAMPEKNVVSFTTMIDGYAKAG--DMAAARFL-FEQA-----TEKDVV 69
K DL A +F + K++VS+ +I YA +G D A FL E++ +V+
Sbjct: 310 KREDLGDAHKIFSDIKNKSLVSWNALISSYADSGLCDDAYEVFLKLEKSNGHSPVRPNVI 369
Query: 70 AWSALISGYVQNGQPNQALKVFLEMESKNVKPDEFILVSLMSATSQLGHLELAQWVDSYV 129
+WSA+ISG+ G+ ++L++F +M+ V + + S++S ++L L L + + +Y
Sbjct: 370 SWSAVISGFASKGRLEKSLELFRQMQLAKVMANCVTISSVLSVCAELAALNLGRELHAYA 429
Query: 130 SKSSIDLQQDHVIAA--LLDMNAKCGNMDRALKLFKEMPKRDLVSYCSMIQGLSIHGCGE 187
++ +D D+++ L++M KCG + A +F + RDL+S+ S+I G +HG GE
Sbjct: 430 IRNLMD---DNILVGNGLVNMYMKCGVFEEAHLVFDNIKGRDLISWNSLIGGYGMHGLGE 486
Query: 188 DAVRLFNSMLMEGLVPDEVAFTIILTACSHSGLVDEGWNYFQSMKQKYGISPSPDHFACM 247
+AVR F+ M+ GL PD++ F +L+ACSH+GLV G N F M ++ I P+ +H+ACM
Sbjct: 487 NAVRTFDEMINAGLRPDKITFVAVLSACSHAGLVAAGRNLFDRMVTEFSIEPTVEHYACM 546
Query: 248 VDLLSRSGHLGDAYELMKSMH-EPHAGAWGALLGACKLHGDSDLGEIVANQLFELEPQNA 306
VDLL R+G L +A++++++M EP+ WGALL +C+++ D+DL E + +++ L+ +
Sbjct: 547 VDLLGRAGLLQEAHDIVRNMPIEPNECVWGALLNSCRMYRDTDLIEEIESRILALKSEIT 606
Query: 307 ANYILLSNIYAAAERWIDVSLVRSRMRERSVQKIPGCS 344
+++LLSNIYA + + D + VR +E+ +KIPG S
Sbjct: 607 GSFMLLSNIYADSGKREDSARVRVSAKEKGFKKIPGQS 644
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 57/210 (27%), Positives = 110/210 (52%), Gaps = 4/210 (1%)
Query: 43 MIDGYAKAGDMAAARFLFEQATEKDV--VAWSALISGYVQNGQPNQALKVFLEMESKNVK 100
+I Y++ ++ AR +F + + + W+++I V +G N A+K++ +M
Sbjct: 64 LIATYSRFNSISEARKIFTTTPFESLSNLVWNSIIRANVSHGYYNYAVKIYHQMMKFGFL 123
Query: 101 PDEFILVSLMSATSQLGHLELAQWVDSYVSKSSIDLQQDHVIAALLDMNAKCGNMDRALK 160
PD F L ++ + S++G + L + V +V ++ HV+ L+ M K M+ A K
Sbjct: 124 PDGFTLPLIIKSCSKIGSVGLCKIVHCHVLETGFK-NHVHVVNELVGMYGKVRRMEDACK 182
Query: 161 LFKEMPKRDLVSYCSMIQGLSIHGCGEDAVRLFNSMLMEGLVPDEVAFTIILTACSHSGL 220
+F M R ++S+ +++ G + + A R+F M +EGL P+ V +T +L++ + GL
Sbjct: 183 VFDGMVVRSVLSWNTLVSGYAFNFDYVGAFRVFKRMELEGLEPNYVTWTSLLSSHARCGL 242
Query: 221 VDEGWNYFQSMKQKYGISPSPDHFACMVDL 250
DE F+ M+ K GI S + A ++ +
Sbjct: 243 FDETMELFKVMRIK-GIEISGEAVAVVLSV 271
Score = 58.9 bits (141), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 49/241 (20%), Positives = 119/241 (49%), Gaps = 14/241 (5%)
Query: 3 QRNVASWNAMLCGFVKDGDLSSARGVFDAMPEKNVVSFTTMIDGYAKAGDMAAARFLFE- 61
+ +V N ++ + K + A VFD M ++V+S+ T++ GYA D A +F+
Sbjct: 158 KNHVHVVNELVGMYGKVRRMEDACKVFDGMVVRSVLSWNTLVSGYAFNFDYVGAFRVFKR 217
Query: 62 ---QATEKDVVAWSALISGYVQNGQPNQALKVFLEMESKNVKPDEFILVSLMSATSQLGH 118
+ E + V W++L+S + + G ++ +++F M K ++ + ++S + +
Sbjct: 218 MELEGLEPNYVTWTSLLSSHARCGLFDETMELFKVMRIKGIEISGEAVAVVLSVCADMDG 277
Query: 119 LELAQWVDSYVSKSSIDLQQDHVIA--ALLDM-NAKCGNMDRALKLFKEMPKRDLVSYCS 175
++ + + +V K +D++ AL+ + K ++ A K+F ++ + LVS+ +
Sbjct: 278 VQRGKEIHGFVIKGG---YEDYLFVKNALIGIYGKKREDLGDAHKIFSDIKNKSLVSWNA 334
Query: 176 MIQGLSIHGCGEDAVRLF----NSMLMEGLVPDEVAFTIILTACSHSGLVDEGWNYFQSM 231
+I + G +DA +F S + P+ ++++ +++ + G +++ F+ M
Sbjct: 335 LISSYADSGLCDDAYEVFLKLEKSNGHSPVRPNVISWSAVISGFASKGRLEKSLELFRQM 394
Query: 232 K 232
+
Sbjct: 395 Q 395
>Medtr2g049310.1 | PPR containing plant-like protein | HC |
chr2:21732028-21729769 | 20130731
Length = 717
Score = 223 bits (567), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 117/308 (37%), Positives = 191/308 (62%), Gaps = 5/308 (1%)
Query: 41 TTMIDGYAKAGDMAAARFLFEQATEKDVVAWSALISGYVQNGQPNQALKVFLEMESKNVK 100
+++D Y+ D+ +AR +F ++ VV+WSA+I GY + +AL +F+EM+ K
Sbjct: 357 NSLVDMYSTCADLNSARKIFGLIKDRTVVSWSAMIKGYAMHDNCLEALSLFIEMKLSGTK 416
Query: 101 PDEFILVSLMSATSQLGHLELAQWVDSYVSKSSIDLQQDHVIAALLDMNAKCGNMDRALK 160
D I+++++ A +++G L ++ Y K+++D + + +LL+ AKCG ++ A K
Sbjct: 417 VDLVIVINILPAFAKIGALHYVGYLHGYSLKTNLDSLKS-LKTSLLNSYAKCGCIEMARK 475
Query: 161 LFKEMPK--RDLVSYCSMIQGLSIHGCGEDAVRLFNSMLMEGLVPDEVAFTIILTACSHS 218
LF E +D+V++ SMI S HG L+N + + + PD V F +LTAC +S
Sbjct: 476 LFNEEKSSLKDIVAWNSMITAYSNHGEWFQCFELYNQIKLSIVKPDHVTFLGMLTACVNS 535
Query: 219 GLVDEGWNYFQSMKQKYGISPSPDHFACMVDLLSRSGHLGDAYELMKSMH-EPHAGAWGA 277
GLVD+G F+ M YG PS +H ACMVDLL R+G + +A +++++ A +G
Sbjct: 536 GLVDKGKEIFKEMVDIYGFQPSKEHNACMVDLLGRAGKIDEARKIIETNQLNSDARVYGP 595
Query: 278 LLGACKLHG-DSDLGEIVANQLFELEPQNAANYILLSNIYAAAERWIDVSLVRSRMRERS 336
LL ACK+HG ++D E+ A +L ++EP+N ANY+LLSNI+AAA +W + +RS +R+R
Sbjct: 596 LLSACKMHGLETDFAELAAEKLIKMEPENPANYVLLSNIFAAAGKWDKFAKMRSFLRDRG 655
Query: 337 VQKIPGCS 344
++K PGCS
Sbjct: 656 LKKTPGCS 663
Score = 95.5 bits (236), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 56/179 (31%), Positives = 99/179 (55%), Gaps = 1/179 (0%)
Query: 41 TTMIDGYAKAGDMAAARFLFEQATEKDVVAWSALISGYVQNGQPNQALKVFLEMESKNVK 100
T ++ YAK + AR +FE+ EKDVV W+ +IS Y +G P ++L++ M ++
Sbjct: 256 TALLSMYAKLDSLKDARLMFEKMPEKDVVVWNIMISVYSGSGCPKESLELVYCMVRSGIR 315
Query: 101 PDEFILVSLMSATSQLGHLELAQWVDSYVSKSSIDLQQDHVIAALLDMNAKCGNMDRALK 160
PD F + +S+ ++L +E + + + V ++ D Q V +L+DM + C +++ A K
Sbjct: 316 PDMFTAIPAISSITKLKSIEWGKQLHAQVIRNGSDYQVS-VHNSLVDMYSTCADLNSARK 374
Query: 161 LFKEMPKRDLVSYCSMIQGLSIHGCGEDAVRLFNSMLMEGLVPDEVAFTIILTACSHSG 219
+F + R +VS+ +MI+G ++H +A+ LF M + G D V IL A + G
Sbjct: 375 IFGLIKDRTVVSWSAMIKGYAMHDNCLEALSLFIEMKLSGTKVDLVIVINILPAFAKIG 433
>Medtr5g095690.1 | pentatricopeptide (PPR) repeat protein | HC |
chr5:41831683-41828172 | 20130731
Length = 811
Score = 223 bits (567), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 118/311 (37%), Positives = 189/311 (60%), Gaps = 4/311 (1%)
Query: 36 NVVSFTTMIDGYAKAGDMAAARFLFEQATEKDVVAWSALISGYVQNGQPNQALKVFLEME 95
NV ++D YAK G++ + LFE+ +++ V W+ +I GYVQ G +A+ +F M
Sbjct: 372 NVFVSNAIMDVYAKCGEIENSMKLFEELPDRNDVTWNTIIVGYVQLGDGERAMNLFTHML 431
Query: 96 SKNVKPDEFILVSLMSATSQLGHLELAQWVDSYVSKSSIDLQQDHVIA-ALLDMNAKCGN 154
+++P E S++ A++ L LE + S K+ + +D V+A +L+DM AKCG
Sbjct: 432 EHDMQPTEVTYSSVLRASASLAALEPGLQIHSLTIKTMYN--KDTVVANSLIDMYAKCGR 489
Query: 155 MDRALKLFKEMPKRDLVSYCSMIQGLSIHGCGEDAVRLFNSMLMEGLVPDEVAFTIILTA 214
++ A F +M KRD VS+ +MI G S+HG +A+ LF+ M P+++ F +L+A
Sbjct: 490 INDARLTFDKMNKRDEVSWNAMICGYSMHGMSMEALNLFDMMQHTDCKPNKLTFVGVLSA 549
Query: 215 CSHSGLVDEGWNYFQSMKQKYGISPSPDHFACMVDLLSRSGHLGDAYELMKSM-HEPHAG 273
CS++GL+ +G +F+SM + Y I P +H+ CMV LL R G +A +L+ + ++P
Sbjct: 550 CSNAGLLYKGQAHFESMSKDYDIKPCIEHYTCMVWLLGRLGRFDEAMKLIGEIAYQPSVM 609
Query: 274 AWGALLGACKLHGDSDLGEIVANQLFELEPQNAANYILLSNIYAAAERWIDVSLVRSRMR 333
W ALLGAC +H DLG + A + E+EP + A ++LLSN+YA A RW +V+ VR M+
Sbjct: 610 VWRALLGACVIHKKVDLGRVCAQHVLEMEPHDDATHVLLSNMYATAGRWDNVAFVRKYMQ 669
Query: 334 ERSVQKIPGCS 344
++ V+K PG S
Sbjct: 670 KKKVRKEPGLS 680
Score = 121 bits (304), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 71/246 (28%), Positives = 134/246 (54%), Gaps = 2/246 (0%)
Query: 43 MIDGYAKAGDMAAARFLFEQATEKDVVAWSALISGYVQNGQPNQALKVFLEMESKNVKPD 102
+++ YAK+G++ A+ LFE+ + D++ WS +I+ Y Q+ + +AL +FL M +V P+
Sbjct: 278 LLELYAKSGEIIDAQRLFEEMPKTDLIPWSLMIARYAQSDRSKEALDLFLRMRQTSVVPN 337
Query: 103 EFILVSLMSATSQLGHLELAQWVDSYVSKSSIDLQQDHVIAALLDMNAKCGNMDRALKLF 162
F S++ A + L+L + + S V K ++ V A++D+ AKCG ++ ++KLF
Sbjct: 338 NFTFASVLQACASSVSLDLGKQIHSCVLKFGLN-SNVFVSNAIMDVYAKCGEIENSMKLF 396
Query: 163 KEMPKRDLVSYCSMIQGLSIHGCGEDAVRLFNSMLMEGLVPDEVAFTIILTACSHSGLVD 222
+E+P R+ V++ ++I G G GE A+ LF ML + P EV ++ +L A + ++
Sbjct: 397 EELPDRNDVTWNTIIVGYVQLGDGERAMNLFTHMLEHDMQPTEVTYSSVLRASASLAALE 456
Query: 223 EGWNYFQSMKQKYGISPSPDHFACMVDLLSRSGHLGDAYELMKSMHEPHAGAWGALLGAC 282
G S+ K + ++D+ ++ G + DA M++ +W A++
Sbjct: 457 PGLQ-IHSLTIKTMYNKDTVVANSLIDMYAKCGRINDARLTFDKMNKRDEVSWNAMICGY 515
Query: 283 KLHGDS 288
+HG S
Sbjct: 516 SMHGMS 521
Score = 98.2 bits (243), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 66/264 (25%), Positives = 129/264 (48%), Gaps = 2/264 (0%)
Query: 41 TTMIDGYAKAGDMAAARFLFEQATEKDVVAWSALISGYVQNGQPNQALKVFLEMESKNVK 100
T +ID Y+ G++ AR +F+ KD+V+W+ +++ Y +N ++L++F +M K
Sbjct: 175 TALIDAYSVRGNVDVARHVFDDICCKDMVSWTGMVACYAENCFYEESLQLFNQMRIMGYK 234
Query: 101 PDEFILVSLMSATSQLGHLELAQWVDSYVSKSSIDLQQDHVIAALLDMNAKCGNMDRALK 160
P+ F + + + L + + V K D V ALL++ AK G + A +
Sbjct: 235 PNNFTISGALKSCLGLEAFNVGKSVHGCALKGCYD-HDLFVGIALLELYAKSGEIIDAQR 293
Query: 161 LFKEMPKRDLVSYCSMIQGLSIHGCGEDAVRLFNSMLMEGLVPDEVAFTIILTACSHSGL 220
LF+EMPK DL+ + MI + ++A+ LF M +VP+ F +L AC+ S
Sbjct: 294 LFEEMPKTDLIPWSLMIARYAQSDRSKEALDLFLRMRQTSVVPNNFTFASVLQACASSVS 353
Query: 221 VDEGWNYFQSMKQKYGISPSPDHFACMVDLLSRSGHLGDAYELMKSMHEPHAGAWGALLG 280
+D G S K+G++ + ++D+ ++ G + ++ +L + + + + W ++
Sbjct: 354 LDLG-KQIHSCVLKFGLNSNVFVSNAIMDVYAKCGEIENSMKLFEELPDRNDVTWNTIIV 412
Query: 281 ACKLHGDSDLGEIVANQLFELEPQ 304
GD + + + E + Q
Sbjct: 413 GYVQLGDGERAMNLFTHMLEHDMQ 436
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 55/205 (26%), Positives = 90/205 (43%), Gaps = 41/205 (20%)
Query: 1 MPQRNVASWNAMLCGFVKDGDLSSARGVFDAMPE-------------------------- 34
+P RN +WN ++ G+V+ GD A +F M E
Sbjct: 399 LPDRNDVTWNTIIVGYVQLGDGERAMNLFTHMLEHDMQPTEVTYSSVLRASASLAALEPG 458
Query: 35 -------------KNVVSFTTMIDGYAKAGDMAAARFLFEQATEKDVVAWSALISGYVQN 81
K+ V ++ID YAK G + AR F++ ++D V+W+A+I GY +
Sbjct: 459 LQIHSLTIKTMYNKDTVVANSLIDMYAKCGRINDARLTFDKMNKRDEVSWNAMICGYSMH 518
Query: 82 GQPNQALKVFLEMESKNVKPDEFILVSLMSATSQLGHLELAQWVDSYVSKS-SIDLQQDH 140
G +AL +F M+ + KP++ V ++SA S G L Q +SK I +H
Sbjct: 519 GMSMEALNLFDMMQHTDCKPNKLTFVGVLSACSNAGLLYKGQAHFESMSKDYDIKPCIEH 578
Query: 141 VIAALLDMNAKCGNMDRALKLFKEM 165
++ + + G D A+KL E+
Sbjct: 579 Y-TCMVWLLGRLGRFDEAMKLIGEI 602
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 57/253 (22%), Positives = 118/253 (46%), Gaps = 32/253 (12%)
Query: 43 MIDGYAKAGDMAAARFLFEQATEKDVVAWSALISGYVQNGQPNQALKVFLEMESKNVKPD 102
+++ Y ++ + A LF++ + + +++ L GY ++ Q +QAL L + + + +
Sbjct: 76 LLNFYVQSNSLQDASKLFDEMPQTNTISFVTLAQGYSRDHQFHQALHFILRIFKEGHEVN 135
Query: 103 EFILVSLMS--ATSQLGHL---------ELAQWVDSYVSKSSIDLQQDHVIAALLDMNAK 151
F+ +L+ + L HL +L D++V AL+D +
Sbjct: 136 PFVFTTLLKLLVSMDLAHLCWTLHACVYKLGHHADAFVG------------TALIDAYSV 183
Query: 152 CGNMDRALKLFKEMPKRDLVSYCSMIQGLSIHGCGEDAVRLFNSMLMEGLVPDEVAFTII 211
GN+D A +F ++ +D+VS+ M+ + + E++++LFN M + G P+ +
Sbjct: 184 RGNVDVARHVFDDICCKDMVSWTGMVACYAENCFYEESLQLFNQMRIMGYKPNNFTISGA 243
Query: 212 LTACSHSGLVDEGWNYFQSMKQKYGISPSPDH--FA--CMVDLLSRSGHLGDAYELMKSM 267
L +C GL E +N +S+ + DH F +++L ++SG + DA L + M
Sbjct: 244 LKSC--LGL--EAFNVGKSV-HGCALKGCYDHDLFVGIALLELYAKSGEIIDAQRLFEEM 298
Query: 268 HEPHAGAWGALLG 280
+ W ++
Sbjct: 299 PKTDLIPWSLMIA 311
>Medtr4g087150.1 | PPR containing plant-like protein | HC |
chr4:34147385-34144072 | 20130731
Length = 724
Score = 223 bits (567), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 116/346 (33%), Positives = 201/346 (58%), Gaps = 3/346 (0%)
Query: 1 MPQRNVASWNAMLCGFVKDGDLSSARGVFDAMPEKNVVSFTTMIDGYAKAGDMAAARFLF 60
+ + + S N M+ G+ G ++ +F+ M K++ S TMI Y+K G++ A LF
Sbjct: 330 LRDKTLISNNLMIKGYAMSGQFKKSKKLFEKMSLKHLTSLNTMITVYSKNGELDEAVKLF 389
Query: 61 EQAT-EKDVVAWSALISGYVQNGQPNQALKVFLEMESKNVKPDEFILVSLMSATSQLGHL 119
++ E++ V W++++SGY+ NG+ ++ALK+++ M V+ L A + L
Sbjct: 390 DKTKGERNCVTWNSMMSGYIHNGEHSEALKLYVTMRRFLVEYSRSTFSVLFRACAYLCSF 449
Query: 120 ELAQWVDSYVSKSSIDLQQDHVIAALLDMNAKCGNMDRALKLFKEMPKRDLVSYCSMIQG 179
+ Q + ++++K+ + +V AL+D +KCG++ A + F + ++ ++ ++I G
Sbjct: 450 QQGQLLHAHLAKTPYQ-ENVYVGTALVDFYSKCGHLADAQRSFTSIFSPNVAAWTALING 508
Query: 180 LSIHGCGEDAVRLFNSMLMEGLVPDEVAFTIILTACSHSGLVDEGWNYFQSMKQKYGISP 239
+ HGCG +A+ F SML +G+VP+ F +L+ACSH+GLVDEG +F SM+ Y I+P
Sbjct: 509 YAYHGCGSEAISRFRSMLDQGVVPNAATFVAVLSACSHAGLVDEGLKFFHSMQINYRITP 568
Query: 240 SPDHFACMVDLLSRSGHLGDAYELMKSMHEPHAGA-WGALLGACKLHGDSDLGEIVANQL 298
+ +H+ C+VDLL RSG + +A E + M G WGALL A + +LGE A +L
Sbjct: 569 TIEHYTCVVDLLGRSGRVKEAEEFIIQMPIKADGVIWGALLNASCFWNNVELGERAAVKL 628
Query: 299 FELEPQNAANYILLSNIYAAAERWIDVSLVRSRMRERSVQKIPGCS 344
F L+P + + + LSN+YA RW + +R R++ ++K G S
Sbjct: 629 FSLDPNSVSALVTLSNMYARRGRWGKKTKIRKRLQSLELRKDQGFS 674
Score = 75.1 bits (183), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 86/377 (22%), Positives = 143/377 (37%), Gaps = 105/377 (27%)
Query: 10 NAMLCGFVKDGDLSSARGVFDAMPEKNVVSFTTMIDGYAKAGDMAAARFLFEQATEKDVV 69
+A+L +V+ + A VF+ + ++N V ++ M+ GY + + A +FE+ +DVV
Sbjct: 142 SALLHYYVQCCGIREAEMVFEELRDENHVLWSLMLAGYVQRDMIGDAMEIFEKMPVRDVV 201
Query: 70 AWSALISGYVQNGQP-NQALKVFLEM-ESKNVKPDEFILVSLMSATSQLGHLELAQWVDS 127
AW+ LISGY + +AL +F M S V P+EF L ++ ++L L + + V
Sbjct: 202 AWTTLISGYAKREDGCERALDLFGCMRRSSEVLPNEFTLDCVLRVCARLRILYVGKVVHG 261
Query: 128 YVSKSSIDLQQ-----------------------------------DHVIAALLDMN--- 149
K D D +I L+ M
Sbjct: 262 LCIKDGFDFDNSVSSALAEFYCVSDAVDDAKRVYESMVGEACSNVADSLIGGLVSMGRVK 321
Query: 150 ------------------------AKCGNMDRALKLFKEMPKRDLVSYCSMIQGLSIHGC 185
A G ++ KLF++M + L S +MI S +G
Sbjct: 322 EAGMIFYGLRDKTLISNNLMIKGYAMSGQFKKSKKLFEKMSLKHLTSLNTMITVYSKNGE 381
Query: 186 GEDAVRLF------------NSMLMEGLVPD---------------------EVAFTIIL 212
++AV+LF NSM M G + + F+++
Sbjct: 382 LDEAVKLFDKTKGERNCVTWNSM-MSGYIHNGEHSEALKLYVTMRRFLVEYSRSTFSVLF 440
Query: 213 TACSHSGLVDEGWNYFQSMKQKYGISPSPDHF---ACMVDLLSRSGHLGDAYELMKSMHE 269
AC++ +G Q + +P ++ +VD S+ GHL DA S+
Sbjct: 441 RACAYLCSFQQG----QLLHAHLAKTPYQENVYVGTALVDFYSKCGHLADAQRSFTSIFS 496
Query: 270 PHAGAWGALLGACKLHG 286
P+ AW AL+ HG
Sbjct: 497 PNVAAWTALINGYAYHG 513
Score = 72.8 bits (177), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 76/305 (24%), Positives = 133/305 (43%), Gaps = 69/305 (22%)
Query: 36 NVVSFTTMIDGYAKAGDMAAARFLFEQATEKDVVAWSALISGYVQNGQPNQALKVFLEME 95
+V+S I +AK G + AR +F++ + V +W+ +ISGY Q G+ +AL + M
Sbjct: 36 HVISTNISIAHHAKTGKLVEARHMFDEMPLRTVSSWNTMISGYSQWGKYTEALTLVSFMH 95
Query: 96 SKNVKPDEFILVSLMSATSQLGHLELAQWVDSYVSKSSIDLQQDHVIAALLDMNAKC--- 152
S VK +E + +SA ++ G L L + + S + KS + V +ALL +C
Sbjct: 96 SSCVKFNEVSFSACLSACTRGGSLFLGKQIHSLLFKSGYQ-RFGPVGSALLHYYVQCCGI 154
Query: 153 -----------------------GNMDR-----ALKLFKEMPKRDLVSYCSMIQGLSIH- 183
G + R A+++F++MP RD+V++ ++I G +
Sbjct: 155 REAEMVFEELRDENHVLWSLMLAGYVQRDMIGDAMEIFEKMPVRDVVAWTTLISGYAKRE 214
Query: 184 -GCGEDAVRLFNSMLMEG-LVPDEVAFTIILTACS-----------HSGLVDEGWNYFQS 230
GC E A+ LF M ++P+E +L C+ H + +G+++ S
Sbjct: 215 DGC-ERALDLFGCMRRSSEVLPNEFTLDCVLRVCARLRILYVGKVVHGLCIKDGFDFDNS 273
Query: 231 MKQKYGISPSPDHFACMVDLLSRSGHLGDAYELMKSMHEPHAGAWGALLGACKLHGDSDL 290
+S + F C + DA + K ++E G AC DS +
Sbjct: 274 ------VSSALAEFYC----------VSDAVDDAKRVYESMVGE------ACSNVADSLI 311
Query: 291 GEIVA 295
G +V+
Sbjct: 312 GGLVS 316
>Medtr8g028890.1 | PPR containing plant-like protein | HC |
chr8:11200768-11198782 | 20130731
Length = 655
Score = 222 bits (565), Expect = 5e-58, Method: Compositional matrix adjust.
Identities = 112/322 (34%), Positives = 192/322 (59%), Gaps = 10/322 (3%)
Query: 26 RGVFDAMPEKNVVSFTTMIDGYAKAGDMAAARFLFEQATEKDVVAWSALISGYVQNGQPN 85
R FD+ +V+ + +I+ YAK+ ++ AR +F++ + ++VVAW+ +I G+ +G N
Sbjct: 298 RQSFDS----DVLVASALINMYAKSENIIDARRVFDEMSIRNVVAWNTMIVGFGNHGDGN 353
Query: 86 QALKVFLEMESKNVKPDEFILVSLMSATSQLGHLELAQWVDSYVSKSSIDLQQDHVIAA- 144
+ +K+ EM + PDE + S++S+ + V ++ K S QD + A
Sbjct: 354 EVMKLVKEMLREGFLPDELTISSIISSCGYASAITETLQVHAFAVKLSC---QDFLSVAN 410
Query: 145 -LLDMNAKCGNMDRALKLFKEMPKRDLVSYCSMIQGLSIHGCGEDAVRLFNSMLMEGLVP 203
L+ +KCG++ A K F+ + DLV++ S+I + HG E + +F ML G+ P
Sbjct: 411 SLISAYSKCGSITSAFKCFELTSQPDLVTWTSLIYAYAFHGLAEKSTEMFEKMLSYGIKP 470
Query: 204 DEVAFTIILTACSHSGLVDEGWNYFQSMKQKYGISPSPDHFACMVDLLSRSGHLGDAYEL 263
D +AF +L+AC+H GLV +G +YF+ M Y I P +H+ C+VDLL R G + +A+E+
Sbjct: 471 DRIAFLGVLSACAHCGLVTKGLHYFKLMTNAYQIVPDSEHYTCLVDLLGRYGLINEAFEI 530
Query: 264 MKSMH-EPHAGAWGALLGACKLHGDSDLGEIVANQLFELEPQNAANYILLSNIYAAAERW 322
++SM E + GA +G+CKLH + +L ++ A +LF +EP+ + NY ++SNI+A+ + W
Sbjct: 531 LRSMPIEVDSDTLGAFIGSCKLHSNMELAKLAAEKLFLIEPEKSVNYAVMSNIFASQKHW 590
Query: 323 IDVSLVRSRMRERSVQKIPGCS 344
DV +R M ++ K+PGCS
Sbjct: 591 YDVERIRKTMEDKRDAKVPGCS 612
Score = 119 bits (298), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 76/251 (30%), Positives = 129/251 (51%), Gaps = 14/251 (5%)
Query: 43 MIDGYAKAGDMAAARFLFEQATEKDVVAWSALISGYVQNGQPNQALKVFLEMESKNVKPD 102
++ YAK G + AR +F + +D+V W+ ++S YV N P +A +VF M V D
Sbjct: 208 LVGLYAKCGFVENARRVFCDVSCRDLVMWNVMVSCYVFNSLPEEAFRVFNSMRLDVVNGD 267
Query: 103 EFILVSLMSATSQ--LGHLELAQWVDSYVSKSSIDLQQDHVIA-ALLDMNAKCGNMDRAL 159
EF SL+S S L + + + V S V + S D D ++A AL++M AK N+ A
Sbjct: 268 EFTFSSLLSVISDDALEYYDFGKQVHSLVLRQSFD--SDVLVASALINMYAKSENIIDAR 325
Query: 160 KLFKEMPKRDLVSYCSMIQGLSIHGCGEDAVRLFNSMLMEGLVPDEVAFTIILTACSHSG 219
++F EM R++V++ +MI G HG G + ++L ML EG +PDE+ + I+++C ++
Sbjct: 326 RVFDEMSIRNVVAWNTMIVGFGNHGDGNEVMKLVKEMLREGFLPDELTISSIISSCGYAS 385
Query: 220 LVDEGWNYFQSMKQKYGISPSPDHFACMVDLL----SRSGHLGDAYELMKSMHEPHAGAW 275
+ E + + S F + + L S+ G + A++ + +P W
Sbjct: 386 AITETLQV-----HAFAVKLSCQDFLSVANSLISAYSKCGSITSAFKCFELTSQPDLVTW 440
Query: 276 GALLGACKLHG 286
+L+ A HG
Sbjct: 441 TSLIYAYAFHG 451
Score = 82.8 bits (203), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 63/255 (24%), Positives = 118/255 (46%), Gaps = 18/255 (7%)
Query: 47 YAKAGDMAAARFLFEQATEKDVVAWSALISGYVQNGQPNQA------LKVFLEMESKNVK 100
Y K + A+ LFE+ ++VV+W+ +I V N++ F M + +
Sbjct: 105 YLKCQEAEDAKKLFEELPVRNVVSWNIMIRASVGRNDENESSGMRLCFSYFRRMLLEMMV 164
Query: 101 PDEFILVSLMSATSQLGHLELAQWVDSYVSKSSIDLQQDHVIAALLDMNAKCGNMDRALK 160
PD L+ +Q +E+ + + K DL V AL+ + AKCG ++ A +
Sbjct: 165 PDHITFNGLICLCTQFNDIEMGVQLHCFTVKVGFDLDC-FVGCALVGLYAKCGFVENARR 223
Query: 161 LFKEMPKRDLVSYCSMIQGLSIHGCGEDAVRLFNSMLMEGLVPDEVAFTIILTACSHSGL 220
+F ++ RDLV + M+ + E+A R+FNSM ++ + DE F+ +L+ S
Sbjct: 224 VFCDVSCRDLVMWNVMVSCYVFNSLPEEAFRVFNSMRLDVVNGDEFTFSSLLSVIS---- 279
Query: 221 VDEGWNYFQSMKQKYGI----SPSPDHF--ACMVDLLSRSGHLGDAYELMKSMHEPHAGA 274
D+ Y+ KQ + + S D + ++++ ++S ++ DA + M + A
Sbjct: 280 -DDALEYYDFGKQVHSLVLRQSFDSDVLVASALINMYAKSENIIDARRVFDEMSIRNVVA 338
Query: 275 WGALLGACKLHGDSD 289
W ++ HGD +
Sbjct: 339 WNTMIVGFGNHGDGN 353
>Medtr8g031210.2 | PPR containing plant-like protein | HC |
chr8:11676602-11671244 | 20130731
Length = 611
Score = 221 bits (564), Expect = 7e-58, Method: Compositional matrix adjust.
Identities = 119/306 (38%), Positives = 180/306 (58%), Gaps = 3/306 (0%)
Query: 41 TTMIDGYAKAGDMAAARFLFEQATEKDVVAWSALISGYVQNGQPNQALKVFLEMESKNVK 100
T ++D Y K A F + +KDV+AW+ L SGY NG ++++ VF M S +
Sbjct: 257 TALMDMYMKCFSPEKAVDFFNRMPKKDVIAWAVLFSGYADNGMVHESMWVFRNMLSSGTR 316
Query: 101 PDEFILVSLMSATSQLGHLELAQWVDSYVSKSSIDLQQDHVIAALLDMNAKCGNMDRALK 160
PD LV +++ S+LG L+ A ++V K+ + Q + A+L+++ AKC +++ A K
Sbjct: 317 PDAIALVKILTTVSELGILQQAVCFHAFVIKNGFENNQ-FIGASLIEVYAKCSSIEDANK 375
Query: 161 LFKEMPKRDLVSYCSMIQGLSIHGCGEDAVRLFNSMLMEG-LVPDEVAFTIILTACSHSG 219
+FK M +D+V++ S+I HG GE+A++ F M P+ V F IL+ACSHSG
Sbjct: 376 VFKGMTYKDVVTWSSIIAAYGFHGQGEEALKFFYQMANHSDTKPNNVTFISILSACSHSG 435
Query: 220 LVDEGWNYFQSMKQKYGISPSPDHFACMVDLLSRSGHLGDAYELMKSM-HEPHAGAWGAL 278
L+ EG N F M KY + P+ +H+A MVDLL R G L A +L+ +M + WGAL
Sbjct: 436 LIKEGINMFDIMVNKYKLKPNSEHYAIMVDLLGRMGELDMALDLINNMPMQAGPDIWGAL 495
Query: 279 LGACKLHGDSDLGEIVANQLFELEPQNAANYILLSNIYAAAERWIDVSLVRSRMRERSVQ 338
LGAC++H + +GE+ A LF L+ +A YILLSNIY E W + +R ++E+ +
Sbjct: 496 LGACRIHQNIKMGEVAAKNLFSLDANHAGYYILLSNIYCGDENWHSATKLRRLVKEKRLN 555
Query: 339 KIPGCS 344
KI G S
Sbjct: 556 KIVGQS 561
Score = 119 bits (299), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 64/249 (25%), Positives = 127/249 (51%), Gaps = 2/249 (0%)
Query: 41 TTMIDGYAKAGDMAAARFLFEQATEKDVVAWSALISGYVQNGQPNQALKVFLEMESKNVK 100
+++ Y K G + A LF + ++KD+++WS + + Y NG L +F+EM K +K
Sbjct: 156 NSLLHLYGKTGSIKNASNLFREMSDKDIISWSTMFACYADNGAETDVLDLFIEMLDKRIK 215
Query: 101 PDEFILVSLMSATSQLGHLELAQWVDSYVSKSSIDLQQDHVIAALLDMNAKCGNMDRALK 160
P+ +VS++ A + + +LE + +++ V AL+DM KC + ++A+
Sbjct: 216 PNWVTVVSVLRACACISNLEEGMKIHELAVNYGFEMETT-VSTALMDMYMKCFSPEKAVD 274
Query: 161 LFKEMPKRDLVSYCSMIQGLSIHGCGEDAVRLFNSMLMEGLVPDEVAFTIILTACSHSGL 220
F MPK+D++++ + G + +G +++ +F +ML G PD +A ILT S G+
Sbjct: 275 FFNRMPKKDVIAWAVLFSGYADNGMVHESMWVFRNMLSSGTRPDAIALVKILTTVSELGI 334
Query: 221 VDEGWNYFQSMKQKYGISPSPDHFACMVDLLSRSGHLGDAYELMKSMHEPHAGAWGALLG 280
+ + F + K G + A ++++ ++ + DA ++ K M W +++
Sbjct: 335 LQQAV-CFHAFVIKNGFENNQFIGASLIEVYAKCSSIEDANKVFKGMTYKDVVTWSSIIA 393
Query: 281 ACKLHGDSD 289
A HG +
Sbjct: 394 AYGFHGQGE 402
Score = 108 bits (269), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 70/240 (29%), Positives = 118/240 (49%), Gaps = 3/240 (1%)
Query: 41 TTMIDGYAKAGDMAAARFLFEQATEKDVVAWSALISGYVQNGQPNQALKVFLEME-SKNV 99
+ +ID Y K G M A +F + + DVV W++++SGY Q+G P AL F M S+ V
Sbjct: 54 SALIDLYTKCGQMNDAVEVFMEYPKPDVVLWTSIVSGYEQSGSPELALAFFSRMVVSEKV 113
Query: 100 KPDEFILVSLMSATSQLGHLELAQWVDSYVSKSSIDLQQDHVIAALLDMNAKCGNMDRAL 159
PD LVS+ SA +QL + +L + V +V + +D + + +LL + K G++ A
Sbjct: 114 SPDPVTLVSVASACAQLSNFKLGRSVHGFVKRKGLD-NKLCLANSLLHLYGKTGSIKNAS 172
Query: 160 KLFKEMPKRDLVSYCSMIQGLSIHGCGEDAVRLFNSMLMEGLVPDEVAFTIILTACSHSG 219
LF+EM +D++S+ +M + +G D + LF ML + + P+ V +L AC+
Sbjct: 173 NLFREMSDKDIISWSTMFACYADNGAETDVLDLFIEMLDKRIKPNWVTVVSVLRACACIS 232
Query: 220 LVDEGWNYFQSMKQKYGISPSPDHFACMVDLLSRSGHLGDAYELMKSMHEPHAGAWGALL 279
++EG + YG ++D+ + A + M + AW L
Sbjct: 233 NLEEGMK-IHELAVNYGFEMETTVSTALMDMYMKCFSPEKAVDFFNRMPKKDVIAWAVLF 291
Score = 72.0 bits (175), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 54/207 (26%), Positives = 90/207 (43%), Gaps = 42/207 (20%)
Query: 1 MPQRNVASWNAMLCGFVKDGDLSSARGVFDAMP--------------------------- 33
MP+++V +W + G+ +G + + VF M
Sbjct: 279 MPKKDVIAWAVLFSGYADNGMVHESMWVFRNMLSSGTRPDAIALVKILTTVSELGILQQA 338
Query: 34 ------------EKNVVSFTTMIDGYAKAGDMAAARFLFEQATEKDVVAWSALISGYVQN 81
E N ++I+ YAK + A +F+ T KDVV WS++I+ Y +
Sbjct: 339 VCFHAFVIKNGFENNQFIGASLIEVYAKCSSIEDANKVFKGMTYKDVVTWSSIIAAYGFH 398
Query: 82 GQPNQALKVFLEMES-KNVKPDEFILVSLMSATSQLGHL-ELAQWVDSYVSKSSIDLQQD 139
GQ +ALK F +M + + KP+ +S++SA S G + E D V+K + +
Sbjct: 399 GQGEEALKFFYQMANHSDTKPNNVTFISILSACSHSGLIKEGINMFDIMVNKYKLKPNSE 458
Query: 140 HVIAALLDMNAKCGNMDRALKLFKEMP 166
H A ++D+ + G +D AL L MP
Sbjct: 459 HY-AIMVDLLGRMGELDMALDLINNMP 484
>Medtr8g031210.1 | PPR containing plant-like protein | HC |
chr8:11676602-11671237 | 20130731
Length = 703
Score = 221 bits (563), Expect = 8e-58, Method: Compositional matrix adjust.
Identities = 119/306 (38%), Positives = 180/306 (58%), Gaps = 3/306 (0%)
Query: 41 TTMIDGYAKAGDMAAARFLFEQATEKDVVAWSALISGYVQNGQPNQALKVFLEMESKNVK 100
T ++D Y K A F + +KDV+AW+ L SGY NG ++++ VF M S +
Sbjct: 349 TALMDMYMKCFSPEKAVDFFNRMPKKDVIAWAVLFSGYADNGMVHESMWVFRNMLSSGTR 408
Query: 101 PDEFILVSLMSATSQLGHLELAQWVDSYVSKSSIDLQQDHVIAALLDMNAKCGNMDRALK 160
PD LV +++ S+LG L+ A ++V K+ + Q + A+L+++ AKC +++ A K
Sbjct: 409 PDAIALVKILTTVSELGILQQAVCFHAFVIKNGFENNQ-FIGASLIEVYAKCSSIEDANK 467
Query: 161 LFKEMPKRDLVSYCSMIQGLSIHGCGEDAVRLFNSMLMEG-LVPDEVAFTIILTACSHSG 219
+FK M +D+V++ S+I HG GE+A++ F M P+ V F IL+ACSHSG
Sbjct: 468 VFKGMTYKDVVTWSSIIAAYGFHGQGEEALKFFYQMANHSDTKPNNVTFISILSACSHSG 527
Query: 220 LVDEGWNYFQSMKQKYGISPSPDHFACMVDLLSRSGHLGDAYELMKSM-HEPHAGAWGAL 278
L+ EG N F M KY + P+ +H+A MVDLL R G L A +L+ +M + WGAL
Sbjct: 528 LIKEGINMFDIMVNKYKLKPNSEHYAIMVDLLGRMGELDMALDLINNMPMQAGPDIWGAL 587
Query: 279 LGACKLHGDSDLGEIVANQLFELEPQNAANYILLSNIYAAAERWIDVSLVRSRMRERSVQ 338
LGAC++H + +GE+ A LF L+ +A YILLSNIY E W + +R ++E+ +
Sbjct: 588 LGACRIHQNIKMGEVAAKNLFSLDANHAGYYILLSNIYCGDENWHSATKLRRLVKEKRLN 647
Query: 339 KIPGCS 344
KI G S
Sbjct: 648 KIVGQS 653
Score = 119 bits (298), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 64/249 (25%), Positives = 127/249 (51%), Gaps = 2/249 (0%)
Query: 41 TTMIDGYAKAGDMAAARFLFEQATEKDVVAWSALISGYVQNGQPNQALKVFLEMESKNVK 100
+++ Y K G + A LF + ++KD+++WS + + Y NG L +F+EM K +K
Sbjct: 248 NSLLHLYGKTGSIKNASNLFREMSDKDIISWSTMFACYADNGAETDVLDLFIEMLDKRIK 307
Query: 101 PDEFILVSLMSATSQLGHLELAQWVDSYVSKSSIDLQQDHVIAALLDMNAKCGNMDRALK 160
P+ +VS++ A + + +LE + +++ V AL+DM KC + ++A+
Sbjct: 308 PNWVTVVSVLRACACISNLEEGMKIHELAVNYGFEMETT-VSTALMDMYMKCFSPEKAVD 366
Query: 161 LFKEMPKRDLVSYCSMIQGLSIHGCGEDAVRLFNSMLMEGLVPDEVAFTIILTACSHSGL 220
F MPK+D++++ + G + +G +++ +F +ML G PD +A ILT S G+
Sbjct: 367 FFNRMPKKDVIAWAVLFSGYADNGMVHESMWVFRNMLSSGTRPDAIALVKILTTVSELGI 426
Query: 221 VDEGWNYFQSMKQKYGISPSPDHFACMVDLLSRSGHLGDAYELMKSMHEPHAGAWGALLG 280
+ + F + K G + A ++++ ++ + DA ++ K M W +++
Sbjct: 427 LQQAV-CFHAFVIKNGFENNQFIGASLIEVYAKCSSIEDANKVFKGMTYKDVVTWSSIIA 485
Query: 281 ACKLHGDSD 289
A HG +
Sbjct: 486 AYGFHGQGE 494
Score = 107 bits (268), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 70/240 (29%), Positives = 118/240 (49%), Gaps = 3/240 (1%)
Query: 41 TTMIDGYAKAGDMAAARFLFEQATEKDVVAWSALISGYVQNGQPNQALKVFLEME-SKNV 99
+ +ID Y K G M A +F + + DVV W++++SGY Q+G P AL F M S+ V
Sbjct: 146 SALIDLYTKCGQMNDAVEVFMEYPKPDVVLWTSIVSGYEQSGSPELALAFFSRMVVSEKV 205
Query: 100 KPDEFILVSLMSATSQLGHLELAQWVDSYVSKSSIDLQQDHVIAALLDMNAKCGNMDRAL 159
PD LVS+ SA +QL + +L + V +V + +D + + +LL + K G++ A
Sbjct: 206 SPDPVTLVSVASACAQLSNFKLGRSVHGFVKRKGLD-NKLCLANSLLHLYGKTGSIKNAS 264
Query: 160 KLFKEMPKRDLVSYCSMIQGLSIHGCGEDAVRLFNSMLMEGLVPDEVAFTIILTACSHSG 219
LF+EM +D++S+ +M + +G D + LF ML + + P+ V +L AC+
Sbjct: 265 NLFREMSDKDIISWSTMFACYADNGAETDVLDLFIEMLDKRIKPNWVTVVSVLRACACIS 324
Query: 220 LVDEGWNYFQSMKQKYGISPSPDHFACMVDLLSRSGHLGDAYELMKSMHEPHAGAWGALL 279
++EG + YG ++D+ + A + M + AW L
Sbjct: 325 NLEEGMK-IHELAVNYGFEMETTVSTALMDMYMKCFSPEKAVDFFNRMPKKDVIAWAVLF 383
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 67/244 (27%), Positives = 119/244 (48%), Gaps = 13/244 (5%)
Query: 47 YAKAGDMAAARFLFEQATEKDVVAWSALISGYVQNGQPNQALKVFLEMESKNV------- 99
YA+ + A LF++ K V W+AL+ Y G+ + L +F +M KNV
Sbjct: 46 YARYASIHHAHKLFQETPHKTVYLWNALLRSYCFEGEWVETLSLFCQM--KNVCSVSIEE 103
Query: 100 KPDEFILVSLMSATSQLGHLELAQWVDSYVSKSSIDLQQDHVIAALLDMNAKCGNMDRAL 159
KPD + + + + + L L L + + ++ K ID V +AL+D+ KCG M+ A+
Sbjct: 104 KPDNYSVSIALKSCAGLRKLLLGKMIHGFLKKVRID-NDMFVGSALIDLYTKCGQMNDAV 162
Query: 160 KLFKEMPKRDLVSYCSMIQGLSIHGCGEDAVRLFNSMLM-EGLVPDEVAFTIILTACSHS 218
++F E PK D+V + S++ G G E A+ F+ M++ E + PD V + +AC+
Sbjct: 163 EVFMEYPKPDVVLWTSIVSGYEQSGSPELALAFFSRMVVSEKVSPDPVTLVSVASACAQL 222
Query: 219 GLVDEGWNYFQSMKQKYGISPSPDHFACMVDLLSRSGHLGDAYELMKSMHEPHAGAWGAL 278
G + +K+K G+ ++ L ++G + +A L + M + +W +
Sbjct: 223 SNFKLGRSVHGFVKRK-GLDNKLCLANSLLHLYGKTGSIKNASNLFREMSDKDIISWSTM 281
Query: 279 LGAC 282
AC
Sbjct: 282 F-AC 284
Score = 72.4 bits (176), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 54/207 (26%), Positives = 90/207 (43%), Gaps = 42/207 (20%)
Query: 1 MPQRNVASWNAMLCGFVKDGDLSSARGVFDAMP--------------------------- 33
MP+++V +W + G+ +G + + VF M
Sbjct: 371 MPKKDVIAWAVLFSGYADNGMVHESMWVFRNMLSSGTRPDAIALVKILTTVSELGILQQA 430
Query: 34 ------------EKNVVSFTTMIDGYAKAGDMAAARFLFEQATEKDVVAWSALISGYVQN 81
E N ++I+ YAK + A +F+ T KDVV WS++I+ Y +
Sbjct: 431 VCFHAFVIKNGFENNQFIGASLIEVYAKCSSIEDANKVFKGMTYKDVVTWSSIIAAYGFH 490
Query: 82 GQPNQALKVFLEMES-KNVKPDEFILVSLMSATSQLGHL-ELAQWVDSYVSKSSIDLQQD 139
GQ +ALK F +M + + KP+ +S++SA S G + E D V+K + +
Sbjct: 491 GQGEEALKFFYQMANHSDTKPNNVTFISILSACSHSGLIKEGINMFDIMVNKYKLKPNSE 550
Query: 140 HVIAALLDMNAKCGNMDRALKLFKEMP 166
H A ++D+ + G +D AL L MP
Sbjct: 551 HY-AIMVDLLGRMGELDMALDLINNMP 576
>Medtr8g031210.3 | PPR containing plant-like protein | HC |
chr8:11673838-11671237 | 20130731
Length = 703
Score = 221 bits (563), Expect = 8e-58, Method: Compositional matrix adjust.
Identities = 119/306 (38%), Positives = 180/306 (58%), Gaps = 3/306 (0%)
Query: 41 TTMIDGYAKAGDMAAARFLFEQATEKDVVAWSALISGYVQNGQPNQALKVFLEMESKNVK 100
T ++D Y K A F + +KDV+AW+ L SGY NG ++++ VF M S +
Sbjct: 349 TALMDMYMKCFSPEKAVDFFNRMPKKDVIAWAVLFSGYADNGMVHESMWVFRNMLSSGTR 408
Query: 101 PDEFILVSLMSATSQLGHLELAQWVDSYVSKSSIDLQQDHVIAALLDMNAKCGNMDRALK 160
PD LV +++ S+LG L+ A ++V K+ + Q + A+L+++ AKC +++ A K
Sbjct: 409 PDAIALVKILTTVSELGILQQAVCFHAFVIKNGFENNQ-FIGASLIEVYAKCSSIEDANK 467
Query: 161 LFKEMPKRDLVSYCSMIQGLSIHGCGEDAVRLFNSMLMEG-LVPDEVAFTIILTACSHSG 219
+FK M +D+V++ S+I HG GE+A++ F M P+ V F IL+ACSHSG
Sbjct: 468 VFKGMTYKDVVTWSSIIAAYGFHGQGEEALKFFYQMANHSDTKPNNVTFISILSACSHSG 527
Query: 220 LVDEGWNYFQSMKQKYGISPSPDHFACMVDLLSRSGHLGDAYELMKSM-HEPHAGAWGAL 278
L+ EG N F M KY + P+ +H+A MVDLL R G L A +L+ +M + WGAL
Sbjct: 528 LIKEGINMFDIMVNKYKLKPNSEHYAIMVDLLGRMGELDMALDLINNMPMQAGPDIWGAL 587
Query: 279 LGACKLHGDSDLGEIVANQLFELEPQNAANYILLSNIYAAAERWIDVSLVRSRMRERSVQ 338
LGAC++H + +GE+ A LF L+ +A YILLSNIY E W + +R ++E+ +
Sbjct: 588 LGACRIHQNIKMGEVAAKNLFSLDANHAGYYILLSNIYCGDENWHSATKLRRLVKEKRLN 647
Query: 339 KIPGCS 344
KI G S
Sbjct: 648 KIVGQS 653
Score = 119 bits (298), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 64/249 (25%), Positives = 127/249 (51%), Gaps = 2/249 (0%)
Query: 41 TTMIDGYAKAGDMAAARFLFEQATEKDVVAWSALISGYVQNGQPNQALKVFLEMESKNVK 100
+++ Y K G + A LF + ++KD+++WS + + Y NG L +F+EM K +K
Sbjct: 248 NSLLHLYGKTGSIKNASNLFREMSDKDIISWSTMFACYADNGAETDVLDLFIEMLDKRIK 307
Query: 101 PDEFILVSLMSATSQLGHLELAQWVDSYVSKSSIDLQQDHVIAALLDMNAKCGNMDRALK 160
P+ +VS++ A + + +LE + +++ V AL+DM KC + ++A+
Sbjct: 308 PNWVTVVSVLRACACISNLEEGMKIHELAVNYGFEMETT-VSTALMDMYMKCFSPEKAVD 366
Query: 161 LFKEMPKRDLVSYCSMIQGLSIHGCGEDAVRLFNSMLMEGLVPDEVAFTIILTACSHSGL 220
F MPK+D++++ + G + +G +++ +F +ML G PD +A ILT S G+
Sbjct: 367 FFNRMPKKDVIAWAVLFSGYADNGMVHESMWVFRNMLSSGTRPDAIALVKILTTVSELGI 426
Query: 221 VDEGWNYFQSMKQKYGISPSPDHFACMVDLLSRSGHLGDAYELMKSMHEPHAGAWGALLG 280
+ + F + K G + A ++++ ++ + DA ++ K M W +++
Sbjct: 427 LQQAV-CFHAFVIKNGFENNQFIGASLIEVYAKCSSIEDANKVFKGMTYKDVVTWSSIIA 485
Query: 281 ACKLHGDSD 289
A HG +
Sbjct: 486 AYGFHGQGE 494
Score = 107 bits (268), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 70/240 (29%), Positives = 118/240 (49%), Gaps = 3/240 (1%)
Query: 41 TTMIDGYAKAGDMAAARFLFEQATEKDVVAWSALISGYVQNGQPNQALKVFLEME-SKNV 99
+ +ID Y K G M A +F + + DVV W++++SGY Q+G P AL F M S+ V
Sbjct: 146 SALIDLYTKCGQMNDAVEVFMEYPKPDVVLWTSIVSGYEQSGSPELALAFFSRMVVSEKV 205
Query: 100 KPDEFILVSLMSATSQLGHLELAQWVDSYVSKSSIDLQQDHVIAALLDMNAKCGNMDRAL 159
PD LVS+ SA +QL + +L + V +V + +D + + +LL + K G++ A
Sbjct: 206 SPDPVTLVSVASACAQLSNFKLGRSVHGFVKRKGLD-NKLCLANSLLHLYGKTGSIKNAS 264
Query: 160 KLFKEMPKRDLVSYCSMIQGLSIHGCGEDAVRLFNSMLMEGLVPDEVAFTIILTACSHSG 219
LF+EM +D++S+ +M + +G D + LF ML + + P+ V +L AC+
Sbjct: 265 NLFREMSDKDIISWSTMFACYADNGAETDVLDLFIEMLDKRIKPNWVTVVSVLRACACIS 324
Query: 220 LVDEGWNYFQSMKQKYGISPSPDHFACMVDLLSRSGHLGDAYELMKSMHEPHAGAWGALL 279
++EG + YG ++D+ + A + M + AW L
Sbjct: 325 NLEEGMK-IHELAVNYGFEMETTVSTALMDMYMKCFSPEKAVDFFNRMPKKDVIAWAVLF 383
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 67/244 (27%), Positives = 119/244 (48%), Gaps = 13/244 (5%)
Query: 47 YAKAGDMAAARFLFEQATEKDVVAWSALISGYVQNGQPNQALKVFLEMESKNV------- 99
YA+ + A LF++ K V W+AL+ Y G+ + L +F +M KNV
Sbjct: 46 YARYASIHHAHKLFQETPHKTVYLWNALLRSYCFEGEWVETLSLFCQM--KNVCSVSIEE 103
Query: 100 KPDEFILVSLMSATSQLGHLELAQWVDSYVSKSSIDLQQDHVIAALLDMNAKCGNMDRAL 159
KPD + + + + + L L L + + ++ K ID V +AL+D+ KCG M+ A+
Sbjct: 104 KPDNYSVSIALKSCAGLRKLLLGKMIHGFLKKVRID-NDMFVGSALIDLYTKCGQMNDAV 162
Query: 160 KLFKEMPKRDLVSYCSMIQGLSIHGCGEDAVRLFNSMLM-EGLVPDEVAFTIILTACSHS 218
++F E PK D+V + S++ G G E A+ F+ M++ E + PD V + +AC+
Sbjct: 163 EVFMEYPKPDVVLWTSIVSGYEQSGSPELALAFFSRMVVSEKVSPDPVTLVSVASACAQL 222
Query: 219 GLVDEGWNYFQSMKQKYGISPSPDHFACMVDLLSRSGHLGDAYELMKSMHEPHAGAWGAL 278
G + +K+K G+ ++ L ++G + +A L + M + +W +
Sbjct: 223 SNFKLGRSVHGFVKRK-GLDNKLCLANSLLHLYGKTGSIKNASNLFREMSDKDIISWSTM 281
Query: 279 LGAC 282
AC
Sbjct: 282 F-AC 284
Score = 72.4 bits (176), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 54/207 (26%), Positives = 90/207 (43%), Gaps = 42/207 (20%)
Query: 1 MPQRNVASWNAMLCGFVKDGDLSSARGVFDAMP--------------------------- 33
MP+++V +W + G+ +G + + VF M
Sbjct: 371 MPKKDVIAWAVLFSGYADNGMVHESMWVFRNMLSSGTRPDAIALVKILTTVSELGILQQA 430
Query: 34 ------------EKNVVSFTTMIDGYAKAGDMAAARFLFEQATEKDVVAWSALISGYVQN 81
E N ++I+ YAK + A +F+ T KDVV WS++I+ Y +
Sbjct: 431 VCFHAFVIKNGFENNQFIGASLIEVYAKCSSIEDANKVFKGMTYKDVVTWSSIIAAYGFH 490
Query: 82 GQPNQALKVFLEMES-KNVKPDEFILVSLMSATSQLGHL-ELAQWVDSYVSKSSIDLQQD 139
GQ +ALK F +M + + KP+ +S++SA S G + E D V+K + +
Sbjct: 491 GQGEEALKFFYQMANHSDTKPNNVTFISILSACSHSGLIKEGINMFDIMVNKYKLKPNSE 550
Query: 140 HVIAALLDMNAKCGNMDRALKLFKEMP 166
H A ++D+ + G +D AL L MP
Sbjct: 551 HY-AIMVDLLGRMGELDMALDLINNMP 576
>Medtr2g019350.1 | PPR containing plant-like protein | HC |
chr2:6301271-6304315 | 20130731
Length = 601
Score = 221 bits (563), Expect = 8e-58, Method: Compositional matrix adjust.
Identities = 121/301 (40%), Positives = 185/301 (61%), Gaps = 10/301 (3%)
Query: 36 NVVSFTTMIDGYAKAGDMAAARFLFEQATEKDVVAWSALISGYVQNGQPNQALKVFLEME 95
NVV T +ID YAK G + AR +F+ EKDVV W+ LI Y ++ +A+ + M
Sbjct: 247 NVV--TALIDMYAKTGCIYLARKVFDGVVEKDVVLWNCLIKNYARSCLVEEAVALLQSMR 304
Query: 96 SKNVKPDEFILVSLMSATSQLGHLELAQWVDSYVSKSSIDLQQDHVI-AALLDMNAKCGN 154
+ VKP+ LV L+S S G ++ ++V S + + ++L D ++ AL+D+ AKCG
Sbjct: 305 QEGVKPNSSTLVGLLSVYSASGSMQGVRYVTSLIEEEKLEL--DVILGTALVDVYAKCGF 362
Query: 155 MDRALKLFKEMPKRDLVSYCSMIQGLSIHGCGEDAVRLFNSMLMEGLVPDEVAFTIILTA 214
+D A+++F+ M +D+ S+ ++I G IHG +A+ LFN M EG P+E+ F ILTA
Sbjct: 363 LDEAMEIFERMENKDVKSWTAVISGHGIHGQAINAISLFNRMENEGFRPNEITFLAILTA 422
Query: 215 CSHSGLVDEGWNYFQSMKQKYGISPSPDHFACMVDLLSRSGHLGDAYELMKSMH-EPHAG 273
CSH GLV EG +F+ M Q++G SP +H+ C++DLL R+G L +A+EL+KS+ + A
Sbjct: 423 CSHGGLVTEGVEFFKRMVQEHGFSPWVEHYGCLIDLLGRAGMLHEAFELIKSLPIKGDAT 482
Query: 274 AWGALLGACKLHGDSDLGEIVANQLFELEPQNAANYILLSNIYAAAERWIDVSLVRSRMR 333
+W LL AC++HGD LGE V + L + + +L+S YAAA R D+ +RM+
Sbjct: 483 SWRTLLSACRVHGDVKLGECVKDVLSNFYTPHPTDSLLISGTYAAAGRISDL----TRMQ 538
Query: 334 E 334
E
Sbjct: 539 E 539
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 50/186 (26%), Positives = 96/186 (51%), Gaps = 7/186 (3%)
Query: 5 NVASWNAMLCGFVKDGDLSSARGVFDAMPEK----NVVSFTTMIDGYAKAGDMAAARFLF 60
N ++ +L + G + R V + E+ +V+ T ++D YAK G + A +F
Sbjct: 311 NSSTLVGLLSVYSASGSMQGVRYVTSLIEEEKLELDVILGTALVDVYAKCGFLDEAMEIF 370
Query: 61 EQATEKDVVAWSALISGYVQNGQPNQALKVFLEMESKNVKPDEFILVSLMSATSQLGHL- 119
E+ KDV +W+A+ISG+ +GQ A+ +F ME++ +P+E +++++A S G +
Sbjct: 371 ERMENKDVKSWTAVISGHGIHGQAINAISLFNRMENEGFRPNEITFLAILTACSHGGLVT 430
Query: 120 ELAQWVDSYVSKSSIDLQQDHVIAALLDMNAKCGNMDRALKLFKEMP-KRDLVSYCSMIQ 178
E ++ V + +H L+D+ + G + A +L K +P K D S+ +++
Sbjct: 431 EGVEFFKRMVQEHGFSPWVEHY-GCLIDLLGRAGMLHEAFELIKSLPIKGDATSWRTLLS 489
Query: 179 GLSIHG 184
+HG
Sbjct: 490 ACRVHG 495
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 67/299 (22%), Positives = 128/299 (42%), Gaps = 24/299 (8%)
Query: 52 DMAAARFLFEQATEKDVVAWSALISGYVQNGQPNQALKVFLEMESKNVKPDEFILVSLMS 111
DM A +F ++ ++ ++ GY + N+AL +F ++ + D F +++M
Sbjct: 58 DMNYASTIFTCIQNPNLFMYNTMLRGYSVSNSSNKALPIFNKLRNSGNGLDPFSFIAVMK 117
Query: 112 ATSQLGHLELAQWVDSYVSKSS----IDLQQDHVIAALLDMNAKCGNMDRALKLFKEMPK 167
A + + + V V KS +DL +L CG +D A K+F E P+
Sbjct: 118 ACGRSFEVGFGRGVHGIVVKSGNRFFVDLNN-----TILQFYCVCGRIDDARKVFDECPE 172
Query: 168 R-DLVSYCSMIQGLSIHGCGEDAVRLFNSMLMEGL--VPDEVAFTI-ILTACSHSGLVDE 223
R DLVS+ ++ G + D +F+ L G + VA T+ +L+A G
Sbjct: 173 RNDLVSWNILMGGCVLV---SDYSFVFDLFLKRGCSGIRASVATTLSLLSAAGDIGSFVL 229
Query: 224 GWNYFQSMKQKYGISPSPDHFACMVDLLSRSGHLGDAYELMKSMHEPHAGAWGALLGACK 283
G + K G + + ++D+ +++G + A ++ + E W L+ K
Sbjct: 230 GKS-LHGYCIKIGFCCNLNVVTALIDMYAKTGCIYLARKVFDGVVEKDVVLWNCLI---K 285
Query: 284 LHGDSDLGEIVANQLFELEPQ----NAANYILLSNIYAAAERWIDVSLVRSRMRERSVQ 338
+ S L E L + + N++ + L ++Y+A+ V V S + E ++
Sbjct: 286 NYARSCLVEEAVALLQSMRQEGVKPNSSTLVGLLSVYSASGSMQGVRYVTSLIEEEKLE 344
>Medtr8g075460.1 | PPR containing plant-like protein | HC |
chr8:31911388-31913406 | 20130731
Length = 672
Score = 221 bits (562), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 116/319 (36%), Positives = 187/319 (58%), Gaps = 4/319 (1%)
Query: 28 VFDAMPEKNVVSFTTMIDGYAKAGDMAAARFLFEQATEKDVVAWSALISGYVQNGQPNQA 87
+F + + + TMI Y G + A+ +F K +++W++++ G QN P++A
Sbjct: 352 LFHELKVYDAILLNTMITVYCNCGRVEDAKEVFNSMPNKTLISWNSILVGLTQNACPSEA 411
Query: 88 LKVFLEMESKNVKPDEFILVSLMSATSQLGHLELAQWVDSYVSKSSIDLQQDHVI-AALL 146
L F M +VK D+F S++SA + LEL + + + ++ L+ D +I +L+
Sbjct: 412 LDTFSMMNKLDVKMDKFSFASVISACAIKSSLELGEQL--FGKAITLGLESDQIICTSLV 469
Query: 147 DMNAKCGNMDRALKLFKEMPKRDLVSYCSMIQGLSIHGCGEDAVRLFNSMLMEGLVPDEV 206
D KCG ++ K+F M K D VS+ +M+ G + +G G +A+ LFN M G+ P +
Sbjct: 470 DFYCKCGLVEMGRKVFDGMIKTDEVSWNTMLMGYATNGYGIEALTLFNEMGYSGVRPSAI 529
Query: 207 AFTIILTACSHSGLVDEGWNYFQSMKQKYGISPSPDHFACMVDLLSRSGHLGDAYELMKS 266
FT IL+AC H GLV+EG + F++MK Y I+P +H++CMVDL +R G G+A L++
Sbjct: 530 TFTGILSACDHCGLVEEGRDLFRTMKHDYDINPGIEHYSCMVDLFARVGCFGEAMYLIEE 589
Query: 267 M-HEPHAGAWGALLGACKLHGDSDLGEIVANQLFELEPQNAANYILLSNIYAAAERWIDV 325
M + A W ++L C HG+ +G++ A ++ +L+P N+ YI LSNI A +E W
Sbjct: 590 MPFQADANMWLSVLRGCVSHGNKTIGKMAAEKIIQLDPGNSGAYIQLSNILATSEDWEGS 649
Query: 326 SLVRSRMRERSVQKIPGCS 344
+ VR MR ++VQKIPGCS
Sbjct: 650 AEVRELMRNKNVQKIPGCS 668
Score = 103 bits (257), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 77/281 (27%), Positives = 144/281 (51%), Gaps = 14/281 (4%)
Query: 1 MPQRNVASWNAMLCGFVKDGDLSSARGVFDAMPEKNVVSFTTMIDGYAKAGDMAAARFLF 60
MPQ N SWN ++ + G + + +F AMP K S+ ++ +K+GD+ A+ LF
Sbjct: 56 MPQPNPFSWNTLIEAHINLGHRNKSLELFHAMPHKTHYSWNLIVSTLSKSGDLQQAQALF 115
Query: 61 EQATEKDVVAWSALISGYVQNGQPNQALKVFLEME---SKNVKPDEFILVSLMSATSQLG 117
K+ + W+++I GY ++G P +L +F EM + V D F+L ++ A + L
Sbjct: 116 NAMPMKNPLVWNSMIHGYSRHGYPRNSLLLFKEMNLDPLETVHRDAFVLSTVFGACADLF 175
Query: 118 HLELAQWVDSYVSKSSIDLQQDHVI-AALLDMNAKCGNMDRALKLFKEMPKRDLVSYCSM 176
L+ + V + V + +QD V+ +++++ KCG++D A ++ + + D S ++
Sbjct: 176 ALDCGKQVHARVFIDGFEFEQDKVLCSSIVNFYGKCGDLDSAARVVGFVKEVDDFSLSAL 235
Query: 177 IQGLSIHGCGEDAVRLFNSMLMEGLVPDEVAFTIILTACSHSGLVDEGWNYFQSMKQKYG 236
+ G + G DA ++F++ + P V + I++ +G E F M++ G
Sbjct: 236 VSGYANAGRMSDARKVFDN----KVDPCSVLWNSIISGYVSNGEEMEALALFNKMRRN-G 290
Query: 237 ISPSPDHFACMVDLLSRSGHLGDAYELMKSMHEPHAGAWGA 277
+ F+ + ++LS S L + EL+K MH+ HA GA
Sbjct: 291 VWGD---FSAVANILSISSSLLNV-ELVKQMHD-HAFKIGA 326
Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 76/296 (25%), Positives = 138/296 (46%), Gaps = 39/296 (13%)
Query: 18 KDGDLSSARGVFDAMPEKNVVSFTTMIDGYAKAGDMAAARFLFEQATEKDVVAWSALISG 77
K GDL SA V + E + S + ++ GYA AG M+ AR +F+ + V W+++ISG
Sbjct: 210 KCGDLDSAARVVGFVKEVDDFSLSALVSGYANAGRMSDARKVFDNKVDPCSVLWNSIISG 269
Query: 78 YVQNGQPNQALKVFLEMESKNVKPDEFILVSLMSATSQLGHLELAQWVDSYVSKSSIDLQ 137
YV NG+ +AL +F +M V D + +++S +S L ++EL + + + K I
Sbjct: 270 YVSNGEEMEALALFNKMRRNGVWGDFSAVANILSISSSLLNVELVKQMHDHAFK--IGAT 327
Query: 138 QDHVIAA-LLDMNAK-------------------------------CGNMDRALKLFKEM 165
D V+A+ LLD +K CG ++ A ++F M
Sbjct: 328 HDIVVASTLLDAYSKCQHPHDSCKLFHELKVYDAILLNTMITVYCNCGRVEDAKEVFNSM 387
Query: 166 PKRDLVSYCSMIQGLSIHGCGEDAVRLFNSMLMEGLVPDEVAFTIILTACSHSGLVDEGW 225
P + L+S+ S++ GL+ + C +A+ F+ M + D+ +F +++AC+ ++ G
Sbjct: 388 PNKTLISWNSILVGLTQNACPSEALDTFSMMNKLDVKMDKFSFASVISACAIKSSLELGE 447
Query: 226 NYFQSMKQKYGISPSPDHFAC--MVDLLSRSGHLGDAYELMKSMHEPHAGAWGALL 279
F + + D C +VD + G + ++ M + +W +L
Sbjct: 448 QLF---GKAITLGLESDQIICTSLVDFYCKCGLVEMGRKVFDGMIKTDEVSWNTML 500
>Medtr2g021710.1 | PPR containing plant-like protein | HC |
chr2:7399056-7396074 | 20130731
Length = 727
Score = 221 bits (562), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 120/321 (37%), Positives = 190/321 (59%), Gaps = 8/321 (2%)
Query: 29 FDAMPEKNVVSFTTMIDGYAKAGDMAAARFLFEQATEKDVVAWSALISGYVQNGQPNQAL 88
F+ + ++ S+ + G+ K G M A F++ +DV +WS +ISGY Q+ P AL
Sbjct: 375 FEVGVKDHLESWNALTAGFIKNGMMDHALKTFDKMHVRDVFSWSTMISGYAQSEHPKMAL 434
Query: 89 KVFLEMESKNVKPDEFILVSLMSATSQLGHLELAQWVDSYVSKSSIDLQQDHVIAALLDM 148
++F +M + +KP+E +VS+ SA + LG L+ + Y+ SI D++ AAL+DM
Sbjct: 435 ELFHKMLAGGIKPNEVTMVSVFSAIATLGTLQEGKLAHEYMRSESIPFN-DNLRAALIDM 493
Query: 149 NAKCGNMDRALKLFKEMPKRDLVSYCS----MIQGLSIHGCGEDAVRLFNSMLMEGLVPD 204
AKCG+++ AL+ F ++ RD VS S +I GL+ HG + +F+ M + P+
Sbjct: 494 YAKCGSINSALQFFNQI--RDEVSSVSPWNAIICGLASHGHASMCLEVFSDMQRFHIKPN 551
Query: 205 EVAFTIILTACSHSGLVDEGWNYFQSMKQKYGISPSPDHFACMVDLLSRSGHLGDAYELM 264
+ F +L+AC H+GLV+ G F++MK Y + P H+ CM+D+L R+G L +A E++
Sbjct: 552 PITFIGVLSACCHAGLVESGKRIFKTMKSAYNVEPDIKHYGCMIDILGRAGLLEEAEEMI 611
Query: 265 KSM-HEPHAGAWGALLGACKLHGDSDLGEIVANQLFELEPQNAANYILLSNIYAAAERWI 323
+SM E WG LL AC+ HG+ ++GE A L L P + +LLSNIYA A +W
Sbjct: 612 RSMPMEADIVIWGTLLAACRTHGNVNIGERAAENLARLAPSHGGGKVLLSNIYANAGKWE 671
Query: 324 DVSLVRSRMRERSVQKIPGCS 344
+VS VRS M+ +++ + PG S
Sbjct: 672 EVSFVRSVMQGQTMDREPGYS 692
Score = 124 bits (311), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 92/326 (28%), Positives = 162/326 (49%), Gaps = 40/326 (12%)
Query: 13 LCGFVKDGDLSSARGVFDAMPEKNVVSFTTMIDGYAKAGDMAAARFLFEQATEKDVVAWS 72
LC V++ AR +FD MPE+N+V++ M++GYAK G + AR LF+ +KDV++W
Sbjct: 232 LCSGVRE-----ARRLFDEMPERNLVTWNVMLNGYAKTGLVDEARELFDGICDKDVISWG 286
Query: 73 ALISGYVQNGQPNQALKVFLEMESKNVKPDEFILVSLMSATS---------QLGHLELAQ 123
+I GY+Q G+ +AL+++ M P+E ++V+L+SA QL + +
Sbjct: 287 TMIDGYIQKGRLREALEIYRAMLQTGHGPNEVMIVNLVSACGRGTAIVDGWQLHGTVVKR 346
Query: 124 WVDS-----------YVSKSSIDLQ--------QDHVIA--ALLDMNAKCGNMDRALKLF 162
D Y + +DL +DH+ + AL K G MD ALK F
Sbjct: 347 GFDCYNFIQTTIIYFYAACGMMDLACLQFEVGVKDHLESWNALTAGFIKNGMMDHALKTF 406
Query: 163 KEMPKRDLVSYCSMIQGLSIHGCGEDAVRLFNSMLMEGLVPDEVAFTIILTACSHSGLVD 222
+M RD+ S+ +MI G + + A+ LF+ ML G+ P+EV + +A + G +
Sbjct: 407 DKMHVRDVFSWSTMISGYAQSEHPKMALELFHKMLAGGIKPNEVTMVSVFSAIATLGTLQ 466
Query: 223 EGWNYFQSMKQKYGISPSPDHFACMVDLLSRSGHLGDAYELMKSMHE--PHAGAWGALLG 280
EG + M+ + I + + A ++D+ ++ G + A + + + W A++
Sbjct: 467 EGKLAHEYMRSE-SIPFNDNLRAALIDMYAKCGSINSALQFFNQIRDEVSSVSPWNAIIC 525
Query: 281 ACKLHGDSDLG-EIVAN-QLFELEPQ 304
HG + + E+ ++ Q F ++P
Sbjct: 526 GLASHGHASMCLEVFSDMQRFHIKPN 551
Score = 108 bits (270), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 71/260 (27%), Positives = 128/260 (49%), Gaps = 30/260 (11%)
Query: 5 NVASWNAMLCGFVKDGDLSSARGVFDAMPEKNVVSFTTMIDGYAKAGDMAAARFLFEQAT 64
N N+++ + K GD+ +A+ +FD + VS M+ GY + G + AR LF+
Sbjct: 87 NTFIQNSLINMYAKCGDIKNAQLLFDGFATLDSVSCNIMVSGYVRNGQIDNARKLFDVMP 146
Query: 65 EKDVVAWSALISGYVQNGQPNQALKVFLEMESKNVKPDEFILVSLMSATSQLGHLELAQW 124
K V+++ +I G+VQNG +AL+VF +M S V P++ LV+++SA S LG + +
Sbjct: 147 NKGCVSYTTMIMGFVQNGFFREALEVFKDMRSCGVVPNDLTLVNVISACSHLGEVLNCRM 206
Query: 125 VDSYVSK--------SSIDLQQDHVIAA----------------------LLDMNAKCGN 154
V V K S +L + + + +L+ AK G
Sbjct: 207 VHGLVVKMFVVGLVIVSTNLMHAYCLCSGVREARRLFDEMPERNLVTWNVMLNGYAKTGL 266
Query: 155 MDRALKLFKEMPKRDLVSYCSMIQGLSIHGCGEDAVRLFNSMLMEGLVPDEVAFTIILTA 214
+D A +LF + +D++S+ +MI G G +A+ ++ +ML G P+EV +++A
Sbjct: 267 VDEARELFDGICDKDVISWGTMIDGYIQKGRLREALEIYRAMLQTGHGPNEVMIVNLVSA 326
Query: 215 CSHSGLVDEGWNYFQSMKQK 234
C + +GW ++ ++
Sbjct: 327 CGRGTAIVDGWQLHGTVVKR 346
>Medtr2g009760.1 | PPR containing plant-like protein | HC |
chr2:2078277-2080236 | 20130731
Length = 622
Score = 221 bits (562), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 126/339 (37%), Positives = 201/339 (59%), Gaps = 14/339 (4%)
Query: 15 GFVKDGD----LSSARGVFDAMPEKNVVSFT-TMIDGYAKAGD-MAAARFLFEQATEKDV 68
GFVK G + RG FD+ SF+ +I Y + G + A +FE ++ +DV
Sbjct: 287 GFVKYGKEIHGYAFRRG-FDSCH-----SFSPALIYLYCECGQSLHLAERIFEGSSLRDV 340
Query: 69 VAWSALISGYVQNGQPNQALKVFLEMESKNVKPDEFILVSLMSATSQLGHLELAQWVDSY 128
V WS++I Y + G+ ++ALK+F +M ++ +P+ L++++SA + L + + Y
Sbjct: 341 VLWSSIIGSYARRGESDKALKLFNKMRTEETEPNYVTLLAVISACTNLSSFKHGGVIHGY 400
Query: 129 VSKSSIDLQQDHVIAALLDMNAKCGNMDRALKLFKEMPKRDLVSYCSMIQGLSIHGCGED 188
+ K I V AL++M AKCG++D + K+F EMP RD V++ SMI +HG GE
Sbjct: 401 ILKFGIGFSI-FVCNALINMYAKCGSLDDSRKIFLEMPSRDSVTWNSMISAYGLHGYGEQ 459
Query: 189 AVRLFNSMLMEGLVPDEVAFTIILTACSHSGLVDEGWNYFQSMKQKYGISPSPDHFACMV 248
A++ F M G+ D V F +L+AC+H+GLV EG F+ + I + +H+AC++
Sbjct: 460 ALQHFYEMKERGVKLDAVTFLAVLSACNHAGLVTEGQQLFEQVNADCEIPITIEHYACLI 519
Query: 249 DLLSRSGHLGDAYELMKSM-HEPHAGAWGALLGACKLHGDSDLGEIVANQLFELEPQNAA 307
DL RSG L DA E++++M +P A W +L+ +CKLHG D+ E +++QL EP NAA
Sbjct: 520 DLHGRSGKLEDALEILRTMPMKPSARIWSSLVSSCKLHGRLDIAESLSSQLIRSEPNNAA 579
Query: 308 NYILLSNIYAAAERWIDVSLVRSRMRERSVQKIPGCSKL 346
+Y LLS I+A RW+D+ VR M+ + ++K G S++
Sbjct: 580 SYTLLSMIHAEKGRWLDIEQVRETMKLQRLRKCYGFSRI 618
Score = 105 bits (263), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 82/351 (23%), Positives = 156/351 (44%), Gaps = 54/351 (15%)
Query: 1 MPQRNVASWNAMLCGFVKDGDLSSARGV--------FDAMPE------------------ 34
MP R+ +WN+M+ ++++G L A + F PE
Sbjct: 127 MPHRDTITWNSMINAYLQNGLLVEALQMLKDFYFLGFLPKPELLASMVSMCGREMDLGWR 186
Query: 35 ------------------KNVVSFTTMIDGYAKAGDMAAARFLFEQATEKDVVAWSALIS 76
+V T +D Y + GD AR +F++ K+ V+W+A+IS
Sbjct: 187 IGRQIHGLVVVDGRIRIQHSVFLSTAFVDFYFRCGDSLMARSVFDEMEVKNEVSWTAVIS 246
Query: 77 GYVQNGQPNQALKVFLEMESKNVKPDEFILVSLMSATSQLGHLELAQWVDSYVSKSSIDL 136
G N + AL + EM+ + V P+ L++L++A ++ G ++ + + Y + D
Sbjct: 247 GCANNQDYDVALACYREMQVEGVSPNRVTLIALLAACARPGFVKYGKEIHGYAFRRGFDS 306
Query: 137 QQDHVIAALLDMNAKCG-NMDRALKLFKEMPKRDLVSYCSMIQGLSIHGCGEDAVRLFNS 195
AL+ + +CG ++ A ++F+ RD+V + S+I + G + A++LFN
Sbjct: 307 CHS-FSPALIYLYCECGQSLHLAERIFEGSSLRDVVLWSSIIGSYARRGESDKALKLFNK 365
Query: 196 MLMEGLVPDEVAFTIILTACSHSGLVDEGWNYFQSMKQKYGISPSPDHFAC--MVDLLSR 253
M E P+ V +++AC++ G K+GI S F C ++++ ++
Sbjct: 366 MRTEETEPNYVTLLAVISACTNLSSFKHG-GVIHGYILKFGIGFSI--FVCNALINMYAK 422
Query: 254 SGHLGDAYELMKSMHEPHAGAWGALLGACKLHGDSDLGEIVANQLFELEPQ 304
G L D+ ++ M + W +++ A LHG GE +E++ +
Sbjct: 423 CGSLDDSRKIFLEMPSRDSVTWNSMISAYGLHG---YGEQALQHFYEMKER 470
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 71/288 (24%), Positives = 135/288 (46%), Gaps = 20/288 (6%)
Query: 42 TMIDGYAKAGDMAAARFLFEQATEKDVVAWSALISGYVQNGQPNQALKVFLEMESKNVKP 101
++I YAK D+ +AR +F+ +D + W+++I+ Y+QNG +AL++ + P
Sbjct: 106 SIISMYAKFFDIESARQVFDTMPHRDTITWNSMINAYLQNGLLVEALQMLKDFYFLGFLP 165
Query: 102 DEFILVSLMSATSQ---LGHLELAQWVDSYVSKSSIDLQQDHVIA-ALLDMNAKCGNMDR 157
+L S++S + LG Q V I +Q ++ A +D +CG+
Sbjct: 166 KPELLASMVSMCGREMDLGWRIGRQIHGLVVVDGRIRIQHSVFLSTAFVDFYFRCGDSLM 225
Query: 158 ALKLFKEMPKRDLVSYCSMIQGLSIHGCGEDAVRLFNSMLMEGLVPDEVAFTIILTACSH 217
A +F EM ++ VS+ ++I G + + + A+ + M +EG+ P+ V +L AC+
Sbjct: 226 ARSVFDEMEVKNEVSWTAVISGCANNQDYDVALACYREMQVEGVSPNRVTLIALLAACAR 285
Query: 218 SGLVD-----EGWNYFQSMKQKYGISPSPDHFACMVDLLSRSGHLGDAYELMKSMHEPHA 272
G V G+ + + + SP+ + C +S HL + S+ +
Sbjct: 286 PGFVKYGKEIHGYAFRRGFDSCHSFSPALIYLYCEC---GQSLHLAERIFEGSSLRD--V 340
Query: 273 GAWGALLGACKLHGDSDLGEIVANQLF--ELEPQNAANYILLSNIYAA 318
W +++G+ G+SD + N++ E EP NY+ L + +A
Sbjct: 341 VLWSSIIGSYARRGESDKALKLFNKMRTEETEP----NYVTLLAVISA 384
>Medtr8g098250.1 | PPR containing plant-like protein | HC |
chr8:40970486-40967324 | 20130731
Length = 998
Score = 219 bits (557), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 113/305 (37%), Positives = 179/305 (58%), Gaps = 3/305 (0%)
Query: 41 TTMIDGYAKAGDMAAARFLFEQATEKDVVAWSALISGYVQNGQPNQALKVFLEMESKNVK 100
+ +ID Y+K + AR +FE+ +KD+V W+A+ SGY Q + ++LK++ ++ +K
Sbjct: 483 SALIDVYSKCSRVGDARLVFEEIQDKDIVVWTAMFSGYTQQSENEESLKLYKCLQMSRLK 542
Query: 101 PDEFILVSLMSATSQLGHLELAQWVDSYVSKSSIDLQQDHVIAALLDMNAKCGNMDRALK 160
P+EF ++++A S + L Q + V K D V L+DM AK G+++ A K
Sbjct: 543 PNEFTFAAVITAASNIASLRHGQQFHNQVIKMGFD-DDPFVANTLVDMYAKSGSIEEAHK 601
Query: 161 LFKEMPKRDLVSYCSMIQGLSIHGCGEDAVRLFNSMLMEGLVPDEVAFTIILTACSHSGL 220
F +D + SMI + HG E A+++F M+MEGL P+ V F +L+ACSH+GL
Sbjct: 602 AFISTNWKDTACWNSMIATYAQHGEAEKALQVFEDMIMEGLKPNYVTFVGVLSACSHTGL 661
Query: 221 VDEGWNYFQSMKQKYGISPSPDHFACMVDLLSRSGHLGDAYELMKSMHEPHAG-AWGALL 279
+D G+++F SM Q +GI P +H+ CMV LL R+G L +A E ++ M A W +LL
Sbjct: 662 LDLGFDHFDSMSQ-FGIEPGIEHYVCMVSLLGRAGKLYEAKEFIEKMPIKQAAVVWRSLL 720
Query: 280 GACKLHGDSDLGEIVANQLFELEPQNAANYILLSNIYAAAERWIDVSLVRSRMRERSVQK 339
AC++ G+ +LG A P ++ +Y+LLSNI+A+ W++V +R +M V K
Sbjct: 721 SACRVSGNVELGTYAAEMAISCNPADSGSYVLLSNIFASKGMWVNVRRLREKMDISGVVK 780
Query: 340 IPGCS 344
PGCS
Sbjct: 781 EPGCS 785
Score = 114 bits (285), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 76/282 (26%), Positives = 141/282 (50%), Gaps = 16/282 (5%)
Query: 43 MIDGYAKAGDMAAARFLFEQATEKDVVAWSALISGYVQNGQPNQALKVFLEMESKNVKPD 102
+ID YAK + AR +F D+V+++A+I GY + + +AL +F EM P
Sbjct: 384 LIDMYAKCDSLTDARKVFNLMAAIDLVSYNAMIEGYSRQDKLCEALDLFREMRLSLSSPT 443
Query: 103 EFILVSLMSATSQLGHLELAQWVDSYVSKSSIDLQQDHVIAALLDMNAKCGNMDRALKLF 162
I VSL+ ++ L HLEL+ + + K + L + +AL+D+ +KC + A +F
Sbjct: 444 LLIFVSLLGVSASLYHLELSNQIHGLIIKYGVSLDE-FAGSALIDVYSKCSRVGDARLVF 502
Query: 163 KEMPKRDLVSYCSMIQGLSIHGCGEDAVRLFNSMLMEGLVPDEVAFTIILTACSHSGLVD 222
+E+ +D+V + +M G + E++++L+ + M L P+E F ++TA S+ +
Sbjct: 503 EEIQDKDIVVWTAMFSGYTQQSENEESLKLYKCLQMSRLKPNEFTFAAVITAASNIASLR 562
Query: 223 EGWNYFQSMKQKYGISPSPDHFACMVDLLSRSGHLGDAYELMKSMHEPHAGAWGALLGAC 282
G F + K G P +VD+ ++SG + +A++ S + W +++
Sbjct: 563 HGQQ-FHNQVIKMGFDDDPFVANTLVDMYAKSGSIEEAHKAFISTNWKDTACWNSMIATY 621
Query: 283 KLHGDSDLGEIVANQLFE------LEPQNAANYILLSNIYAA 318
HG+++ A Q+FE L+P NY+ + +A
Sbjct: 622 AQHGEAE----KALQVFEDMIMEGLKP----NYVTFVGVLSA 655
Score = 107 bits (268), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 89/315 (28%), Positives = 139/315 (44%), Gaps = 45/315 (14%)
Query: 8 SWNAMLCGFVKDGDLSSARGVFDAM------PEKNVVS---------------------- 39
+W ++ G+ K G + +FD M P+K V+S
Sbjct: 209 TWTTIIAGYSKQGRSQVSLKLFDQMKEGHVCPDKYVLSSVLSACLMLKFLEGGKQIHCYV 268
Query: 40 -----------FTTMIDGYAKAGDMAAARFLFEQATEKDVVAWSALISGYVQNGQPNQAL 88
ID Y K + R LF++ +K+VV+W+ +I+G +QN AL
Sbjct: 269 LRSGIVMDVSMVNGFIDFYFKCHKVQLGRKLFDRMVDKNVVSWTTVIAGCMQNSFHRDAL 328
Query: 89 KVFLEMESKNVKPDEFILVSLMSATSQLGHLELAQWVDSYVSKSSIDLQQDHVIAALLDM 148
+F+EM PD F S++++ L LE + V +Y K +ID D V L+DM
Sbjct: 329 DLFVEMARMGWNPDAFGCTSVLNSCGSLVALEKGRQVHAYAIKVNID-NDDFVKNGLIDM 387
Query: 149 NAKCGNMDRALKLFKEMPKRDLVSYCSMIQGLSIHGCGEDAVRLFNSMLMEGLVPDEVAF 208
AKC ++ A K+F M DLVSY +MI+G S +A+ LF M + P + F
Sbjct: 388 YAKCDSLTDARKVFNLMAAIDLVSYNAMIEGYSRQDKLCEALDLFREMRLSLSSPTLLIF 447
Query: 209 TIILTACSHSGLVDEGWNYFQSMKQKYGISPSPDHFA--CMVDLLSRSGHLGDAYELMKS 266
+L S S E N + KYG+ S D FA ++D+ S+ +GDA + +
Sbjct: 448 VSLL-GVSASLYHLELSNQIHGLIIKYGV--SLDEFAGSALIDVYSKCSRVGDARLVFEE 504
Query: 267 MHEPHAGAWGALLGA 281
+ + W A+
Sbjct: 505 IQDKDIVVWTAMFSG 519
Score = 95.9 bits (237), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 66/247 (26%), Positives = 121/247 (48%), Gaps = 6/247 (2%)
Query: 35 KNVVSFTTMIDGYAKAGDMAAARFLFEQATEKDVVAWSALISGYVQNGQPNQALKVFLEM 94
++V T++ID Y K + AR LF+ K W+ +I+GY + G+ +LK+F +M
Sbjct: 174 QDVYVCTSLIDFYTKHACIDDARLLFDGLQVKTSFTWTTIIAGYSKQGRSQVSLKLFDQM 233
Query: 95 ESKNVKPDEFILVSLMSATSQLGHLELAQWVDSYVSKSSIDLQQDHVIAALLDMNAKCGN 154
+ +V PD+++L S++SA L LE + + YV +S I + ++ +D KC
Sbjct: 234 KEGHVCPDKYVLSSVLSACLMLKFLEGGKQIHCYVLRSGIVMDVS-MVNGFIDFYFKCHK 292
Query: 155 MDRALKLFKEMPKRDLVSYCSMIQGLSIHGCGEDAVRLFNSMLMEGLVPDEVAFTIILTA 214
+ KLF M +++VS+ ++I G + DA+ LF M G PD T +L +
Sbjct: 293 VQLGRKLFDRMVDKNVVSWTTVIAGCMQNSFHRDALDLFVEMARMGWNPDAFGCTSVLNS 352
Query: 215 CSHSGLVDEGWNYFQSMKQKYGISPSPDHFA--CMVDLLSRSGHLGDAYELMKSMHEPHA 272
C +++G Q ++ D F ++D+ ++ L DA ++ M
Sbjct: 353 CGSLVALEKGR---QVHAYAIKVNIDNDDFVKNGLIDMYAKCDSLTDARKVFNLMAAIDL 409
Query: 273 GAWGALL 279
++ A++
Sbjct: 410 VSYNAMI 416
Score = 88.6 bits (218), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 61/242 (25%), Positives = 115/242 (47%), Gaps = 3/242 (1%)
Query: 42 TMIDGYAKAGDMAAARFLFEQATEKDVVAWSALISGYVQNGQPNQALKVFLE-MESKNVK 100
T++ Y+K + A LF+ + K++V WS+++S Y + +AL +F++ M S N K
Sbjct: 79 TLLHAYSKLNLVNHANKLFDTMSHKNLVTWSSMVSMYTHHSHCLEALMLFVQFMRSCNEK 138
Query: 101 PDEFILVSLMSATSQLGHLELAQWVDSYVSKSSIDLQQDHVIAALLDMNAKCGNMDRALK 160
P+E+IL S++ A +Q G L A + V K +Q +V +L+D K +D A
Sbjct: 139 PNEYILASVVRACTQFGGLNPALQIHGLVVKGGY-VQDVYVCTSLIDFYTKHACIDDARL 197
Query: 161 LFKEMPKRDLVSYCSMIQGLSIHGCGEDAVRLFNSMLMEGLVPDEVAFTIILTACSHSGL 220
LF + + ++ ++I G S G + +++LF+ M + PD+ + +L+AC
Sbjct: 198 LFDGLQVKTSFTWTTIIAGYSKQGRSQVSLKLFDQMKEGHVCPDKYVLSSVLSACLMLKF 257
Query: 221 VDEGWNYFQSMKQKYGISPSPDHFACMVDLLSRSGHLGDAYELMKSMHEPHAGAWGALLG 280
+ EG + GI +D + + +L M + + +W ++
Sbjct: 258 L-EGGKQIHCYVLRSGIVMDVSMVNGFIDFYFKCHKVQLGRKLFDRMVDKNVVSWTTVIA 316
Query: 281 AC 282
C
Sbjct: 317 GC 318
>Medtr0013s0120.1 | pentatricopeptide (PPR) repeat protein | HC |
scaffold0013:48776-47089 | 20130731
Length = 558
Score = 219 bits (557), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 113/300 (37%), Positives = 189/300 (63%), Gaps = 4/300 (1%)
Query: 47 YAKAGDMAAARFLFEQATEKDVVAWSALISGYVQNGQPNQALKVFLEMESKNVKPDEFIL 106
YAK G + AR +F++ ++D+ +W+A+ISG Q +P++A+ +F M+ + +P++ +
Sbjct: 130 YAKTGFIDYARKVFDEMDKRDIASWNAMISGLAQGSRPDEAIALFNRMKEEGWRPNDVTV 189
Query: 107 VSLMSATSQLGHLELAQWVDSYVSKSSIDLQQDHVIAALLDMNAKCGNMDRALKLFKEMP 166
+ +SA SQLG L+ + V YV +D + V A++DM AKCG +D+A +F+ M
Sbjct: 190 LGALSACSQLGALKEGEIVHRYVLDEKLD-RNVIVCNAVIDMFAKCGFVDKAYSVFESMS 248
Query: 167 -KRDLVSYCSMIQGLSIHGCGEDAVRLFNSMLMEGLVPDEVAFTIILTACSHSGLVDEGW 225
++ L+++ +MI +++G G A+ L + M ++G PD V++ L AC+H+GLVDEG
Sbjct: 249 CRKSLITWNTMIMAFAMNGDGYKALDLLDRMSLDGTCPDAVSYLGALCACNHAGLVDEGV 308
Query: 226 NYFQSMKQKYGISPSPDHFACMVDLLSRSGHLGDAYELMKSMHE-PHAGAWGALLGACKL 284
F MK G+ + H+ MVDLL R+G L +AYE++ SM P W +LLGACK
Sbjct: 309 RLFDLMKVS-GVKLNVKHYGSMVDLLGRAGRLKEAYEIINSMPMFPDVVLWQSLLGACKT 367
Query: 285 HGDSDLGEIVANQLFELEPQNAANYILLSNIYAAAERWIDVSLVRSRMRERSVQKIPGCS 344
+G+ ++ E+ + +L E+ ++ +++LLSN+YAA +RW DV VR M + V+K+PG S
Sbjct: 368 YGNVEMAEMASKKLVEMGSNSSGDFVLLSNVYAAQQRWKDVGRVREAMVDSDVRKVPGFS 427
Score = 78.6 bits (192), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 62/243 (25%), Positives = 112/243 (46%), Gaps = 11/243 (4%)
Query: 50 AGDMAAARFLFEQATEKDVVAWSALISGYVQNGQPNQALKVFLEMESKNVKPDEFILVSL 109
+G+++ A +F Q ++A++ G Q+ +P Q++ + +M + D
Sbjct: 32 SGNLSLAGNIFRQIQNPTTNDYNAILRGLAQSSEPTQSISWYRDMLCCVQRVDALTCSFA 91
Query: 110 MSATSQLGHLELAQWVDSYVSKSSIDLQQDHVIAALLDMNAKCGNMDRALKLFKEMPKRD 169
+ ++ A + S V + D + L AK G +D A K+F EM KRD
Sbjct: 92 LKGCARALAFSEATQLHSQVLRFGFDADVLLLTTLLDVY-AKTGFIDYARKVFDEMDKRD 150
Query: 170 LVSYCSMIQGLSIHGCGEDAVRLFNSMLMEGLVPDEVAFTIILTACSHSGLVDEGWNYFQ 229
+ S+ +MI GL+ ++A+ LFN M EG P++V L+ACS G + EG
Sbjct: 151 IASWNAMISGLAQGSRPDEAIALFNRMKEEGWRPNDVTVLGALSACSQLGALKEG----- 205
Query: 230 SMKQKYGISPSPDH--FAC--MVDLLSRSGHLGDAYELMKSMH-EPHAGAWGALLGACKL 284
+ +Y + D C ++D+ ++ G + AY + +SM W ++ A +
Sbjct: 206 EIVHRYVLDEKLDRNVIVCNAVIDMFAKCGFVDKAYSVFESMSCRKSLITWNTMIMAFAM 265
Query: 285 HGD 287
+GD
Sbjct: 266 NGD 268
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 47/225 (20%), Positives = 89/225 (39%), Gaps = 42/225 (18%)
Query: 1 MPQRNVASWNAMLCGFVKDGDLSSARGVFDAMPE-------------------------- 34
M +R++ASWNAM+ G + A +F+ M E
Sbjct: 146 MDKRDIASWNAMISGLAQGSRPDEAIALFNRMKEEGWRPNDVTVLGALSACSQLGALKEG 205
Query: 35 -------------KNVVSFTTMIDGYAKAGDMAAARFLFEQ-ATEKDVVAWSALISGYVQ 80
+NV+ +ID +AK G + A +FE + K ++ W+ +I +
Sbjct: 206 EIVHRYVLDEKLDRNVIVCNAVIDMFAKCGFVDKAYSVFESMSCRKSLITWNTMIMAFAM 265
Query: 81 NGQPNQALKVFLEMESKNVKPDEFILVSLMSATSQLGHLELAQWVDSYVSKSSIDLQQDH 140
NG +AL + M PD + + A + G ++ + + S + L H
Sbjct: 266 NGDGYKALDLLDRMSLDGTCPDAVSYLGALCACNHAGLVDEGVRLFDLMKVSGVKLNVKH 325
Query: 141 VIAALLDMNAKCGNMDRALKLFKEMPK-RDLVSYCSMIQGLSIHG 184
+++D+ + G + A ++ MP D+V + S++ +G
Sbjct: 326 Y-GSMVDLLGRAGRLKEAYEIINSMPMFPDVVLWQSLLGACKTYG 369
>Medtr8g066670.1 | chlororespiratory reduction protein, putative |
LC | chr8:27704772-27714873 | 20130731
Length = 1504
Score = 218 bits (556), Expect = 5e-57, Method: Compositional matrix adjust.
Identities = 116/353 (32%), Positives = 200/353 (56%), Gaps = 14/353 (3%)
Query: 3 QRNVASWNAMLCGFVKDGDLSSARGVFDAMPEK----NVVSFTTMIDGYAKAGDMAAARF 58
++++ WN ML + G A +F M + NVVS+ ++I G+ + G + A+
Sbjct: 480 KKDIVLWNTMLAACAEKGLSGEALKLFFQMQMESVPPNVVSWNSLIFGFFRNGQVVEAQD 539
Query: 59 LFEQ----ATEKDVVAWSALISGYVQNGQPNQALKVFLEMESKNVKPDEFILVSLMSATS 114
+F + +++ W+ +ISG QNG +A +VF +M+ ++P+ + S +SA +
Sbjct: 540 MFSEMQLSGVTPNLITWTTMISGLAQNGLGYEASRVFQQMQGAGMRPNSISITSALSACT 599
Query: 115 QLGHLELAQWVDSYVSKS--SIDLQQDHVIAALLDMNAKCGNMDRALKLFKEMPKRDLVS 172
+ L + + YV ++ S LQ + +++DM AKCGN+D A +F ++L
Sbjct: 600 NMALLNYGRSIHGYVMRNFMSFSLQ---ITTSIIDMYAKCGNLDDAKFVFIICSTKELPV 656
Query: 173 YCSMIQGLSIHGCGEDAVRLFNSMLMEGLVPDEVAFTIILTACSHSGLVDEGWNYFQSMK 232
Y +MI + HG +A+ LF ++ +G++PD + FT +L+ACSH L+ EG F+ M
Sbjct: 657 YNAMISAYASHGKSAEALALFQELVKQGIMPDHITFTSVLSACSHGRLLKEGLELFKYMV 716
Query: 233 QKYGISPSPDHFACMVDLLSRSGHLGDAYELMKSM-HEPHAGAWGALLGACKLHGDSDLG 291
+ + PS H+ C+V LL+ G L +A ++ +M P A G+LL AC + +++L
Sbjct: 717 CELQMKPSEKHYGCLVKLLTNDGQLDEALRIILTMPSPPDAHILGSLLAACGQNHETELA 776
Query: 292 EIVANQLFELEPQNAANYILLSNIYAAAERWIDVSLVRSRMRERSVQKIPGCS 344
+A L ++EP N NY+ LSN+YAA +W +VS +R M+E+ ++KIPGCS
Sbjct: 777 NYIAKWLLKVEPNNPGNYVALSNVYAALGKWDEVSNIRGFMKEKGLKKIPGCS 829
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 85/332 (25%), Positives = 156/332 (46%), Gaps = 53/332 (15%)
Query: 1 MP--QRNVASWNAMLCGFVKDGDLSSARGVFDAMP------------------------- 33
MP +RN WN+M+ G+V++G A G+F+ M
Sbjct: 270 MPNRKRNDVVWNSMIVGYVQNGMNVEAVGLFEKMRFEGGVEPSEVSLSGFFSACANLEAV 329
Query: 34 ---------------EKNVVSFTTMIDGYAKAGDMAAARFLFEQ-ATEKDVVAWSALISG 77
E N V +++++ Y+K G + +F A KD V W+ +IS
Sbjct: 330 EEGKQGHALVILMGFELNYVLGSSIMNFYSKVGLIEEVELVFRSMAVLKDEVTWNLMISS 389
Query: 78 YVQNGQPNQALKVFLEM-ESKNVKPDEFILVSLMSATSQLGHLELAQWVDSYVSKSSIDL 136
YVQ G +AL++ M E +N++ D L SL++ + ++L + + + ++ +
Sbjct: 390 YVQFGMFEKALEMCHWMREEENLRFDCVTLSSLLALAADTRDVKLGKKLHGFCIRN--EF 447
Query: 137 QQDH-VIAALLDMNAKCGNMDRALKLFK-EMPKRDLVSYCSMIQGLSIHGCGEDAVRLFN 194
D V++ +LDM AKCG MD A +F K+D+V + +M+ + G +A++LF
Sbjct: 448 YSDMAVLSGVLDMYAKCGIMDCARGVFHFAGKKKDIVLWNTMLAACAEKGLSGEALKLFF 507
Query: 195 SMLMEGLVPDEVAFTIILTACSHSGLVDEGWNYFQSMKQKYGISPSPDHFACMVDLLSRS 254
M ME + P+ V++ ++ +G V E + F M Q G++P+ + M+ L+++
Sbjct: 508 QMQMESVPPNVVSWNSLIFGFFRNGQVVEAQDMFSEM-QLSGVTPNLITWTTMISGLAQN 566
Query: 255 GHLGDAYELMKSMH----EPHAGAWGALLGAC 282
G +A + + M P++ + + L AC
Sbjct: 567 GLGYEASRVFQQMQGAGMRPNSISITSALSAC 598
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 57/183 (31%), Positives = 95/183 (51%), Gaps = 5/183 (2%)
Query: 47 YAKAGDMAAARFLFEQATE-KDVVAWSALISGYVQNGQPNQALKVFLEMESKNVKPDEFI 105
YAK A F + +++ +++A++ +NG +AL ++EM K PD F+
Sbjct: 150 YAKCNLTRVAVHFFRNVVKNQNLFSYAAIVGLQARNGLYKEALLSYVEMMEKGFCPDNFV 209
Query: 106 LVSLMSATSQLGHLELAQWVDSYVSKSSIDLQQ-DHVIAALLDMNAKCGNMDRALKLFKE 164
+ + + A L + + + +V K + +V +L+DM KCG ++ A K+F E
Sbjct: 210 VPNGLKACGGLRWIGFGRGIHGFVVKMGNEFDGCVYVATSLVDMYGKCGVLEDAEKVFDE 269
Query: 165 MP--KRDLVSYCSMIQGLSIHGCGEDAVRLFNSMLMEGLV-PDEVAFTIILTACSHSGLV 221
MP KR+ V + SMI G +G +AV LF M EG V P EV+ + +AC++ V
Sbjct: 270 MPNRKRNDVVWNSMIVGYVQNGMNVEAVGLFEKMRFEGGVEPSEVSLSGFFSACANLEAV 329
Query: 222 DEG 224
+EG
Sbjct: 330 EEG 332
>Medtr6g060470.1 | pentatricopeptide (PPR) repeat protein | HC |
chr6:20800229-20798334 | 20130731
Length = 403
Score = 218 bits (556), Expect = 6e-57, Method: Compositional matrix adjust.
Identities = 116/318 (36%), Positives = 183/318 (57%), Gaps = 25/318 (7%)
Query: 22 LSSARGVFDAMPEKNVVSFTTMIDGYAKAGDMAAARFLFEQATEKDVVAWSALISGYVQN 81
+ AR VFD+ ++++ S+ TMI Y +G+M A+ LF++ E+DVV+WS +I+GYVQ
Sbjct: 1 MDDARNVFDSAIDRDLYSWNTMIGVYVGSGNMIQAKNLFDEMHERDVVSWSTIIAGYVQV 60
Query: 82 GQPNQALKVFLEMESKNVKPDEFILVSLMSATSQLGHLELAQWVDSYVSKSSIDLQQDHV 141
G + L+ F M VKP+E+ +VS ++ D +
Sbjct: 61 GCFMEDLEFFHNMLQSEVKPNEYTMVSALAIK-----------------------MNDRL 97
Query: 142 IAALLDMNAKCGNMDRALKLFKEMP-KRDLVSYCSMIQGLSIHGCGEDAVRLFNSMLMEG 200
+A+L+DM AKCG +D A +F E KR + + +MI G ++HG E+A+ LF M +E
Sbjct: 98 LASLIDMYAKCGEIDSASSVFHEHKVKRKVWPWNAMIGGFAMHGKPEEAISLFEQMKVER 157
Query: 201 LVPDEVAFTIILTACSHSGLVDEGWNYFQSMKQKYGISPSPDHFACMVDLLSRSGHLGDA 260
+ P++V F +L ACSH ++ EG +YF+ M YGI+P +H+ CMVDLLSRS L +A
Sbjct: 158 VSPNKVTFIALLNACSHGYMIKEGKSYFELMSSDYGINPEIEHYGCMVDLLSRSELLKEA 217
Query: 261 YELMKSM-HEPHAGAWGALLGACKLHGDSDLGEIVANQLFELEPQNAANYILLSNIYAAA 319
E++ SM P WGALL AC+++ D + G + + E++P + +LL NIY+ +
Sbjct: 218 EEMILSMPMAPDVAIWGALLNACRIYKDMERGYRIGRIIKEIDPNHIGCNVLLGNIYSTS 277
Query: 320 ERWIDVSLVRSRMRERSV 337
RW + ++R R R +
Sbjct: 278 GRWNEARILRERNEIREI 295
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 65/314 (20%), Positives = 143/314 (45%), Gaps = 61/314 (19%)
Query: 4 RNVASWNAMLCGFVKDGDLSSARGVFDAMPEKNVVSFTTMIDG----------------- 46
R++ SWN M+ +V G++ A+ +FD M E++VVS++T+I G
Sbjct: 14 RDLYSWNTMIGVYVGSGNMIQAKNLFDEMHERDVVSWSTIIAGYVQVGCFMEDLEFFHNM 73
Query: 47 -------------------------------YAKAGDMAAARFLF-EQATEKDVVAWSAL 74
YAK G++ +A +F E ++ V W+A+
Sbjct: 74 LQSEVKPNEYTMVSALAIKMNDRLLASLIDMYAKCGEIDSASSVFHEHKVKRKVWPWNAM 133
Query: 75 ISGYVQNGQPNQALKVFLEMESKNVKPDEFILVSLMSATSQLGHL--ELAQWVDSYVSKS 132
I G+ +G+P +A+ +F +M+ + V P++ ++L++A S G++ E + + S
Sbjct: 134 IGGFAMHGKPEEAISLFEQMKVERVSPNKVTFIALLNACSH-GYMIKEGKSYFELMSSDY 192
Query: 133 SIDLQQDHVIAALLDMNAKCGNMDRALKLFKEMP-KRDLVSYCSMIQGLSIHGCGEDAVR 191
I+ + +H ++D+ ++ + A ++ MP D+ + +++ I+ E R
Sbjct: 193 GINPEIEHY-GCMVDLLSRSELLKEAEEMILSMPMAPDVAIWGALLNACRIYKDMERGYR 251
Query: 192 LFNSMLMEGLVPDEVAFTIIL-TACSHSGLVDEGWNYFQSMKQKYGISPSPDHFACMVDL 250
+ +++ + P+ + ++L S SG WN + ++++ I M+
Sbjct: 252 I--GRIIKEIDPNHIGCNVLLGNIYSTSG----RWNEARILRERNEIREIYSFLEEMIRK 305
Query: 251 LSRSGHLGDAYELM 264
L +G++ + E++
Sbjct: 306 LKIAGYVPELGEVL 319
>Medtr1g111670.1 | pentatricopeptide (PPR) repeat protein | HC |
chr1:50487581-50485585 | 20130731
Length = 630
Score = 217 bits (553), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 113/312 (36%), Positives = 181/312 (58%), Gaps = 2/312 (0%)
Query: 34 EKNVVSFTTMIDGYAKAGDMAAARFLFEQATEKDVVAWSALISGYVQNGQPNQALKVFLE 93
+ N T ++ YAK + A +FE E + V WS++++GYVQNG AL +F +
Sbjct: 189 DSNCFVGTALLHVYAKCSSIKDASKMFESMPETNAVTWSSILAGYVQNGLHEAALLLFRD 248
Query: 94 MESKNVKPDEFILVSLMSATSQLGHLELAQWVDSYVSKSSIDLQQDHVIAALLDMNAKCG 153
+ + D F++ S + A + L L + V + KS +V ++L+DM AKCG
Sbjct: 249 YQLMGFEQDAFLISSAVCACAGLATLIEGKQVHAISCKSGFG-SNIYVTSSLIDMYAKCG 307
Query: 154 NMDRALKLFKEMPKRDLVSYCSMIQGLSIHGCGEDAVRLFNSMLMEGLVPDEVAFTIILT 213
+ A +F+ R +V + +MI G H C +A+ LF M GL PD+V + +L
Sbjct: 308 CIREAYIVFQGEELRSIVLWNAMISGFGRHACALEAMILFEKMQQRGLFPDDVTYVSVLN 367
Query: 214 ACSHSGLVDEGWNYFQSMKQKYGISPSPDHFACMVDLLSRSGHLGDAYELMKSM-HEPHA 272
ACSH GL ++G YF M +++ + PS H++CMVD+L R+G + AY+L++ M +
Sbjct: 368 ACSHMGLHEQGHKYFDLMVREHNLRPSVLHYSCMVDILGRAGLVHKAYDLIERMPFSATS 427
Query: 273 GAWGALLGACKLHGDSDLGEIVANQLFELEPQNAANYILLSNIYAAAERWIDVSLVRSRM 332
WG+LL +C++HG+ + EI A LFE+EP NA N++LL+NIYAA ++W +V+ R +
Sbjct: 428 SIWGSLLASCRIHGNIEFAEIAAKHLFEMEPDNAGNHVLLANIYAANKKWEEVAKTRKLL 487
Query: 333 RERSVQKIPGCS 344
R+ ++K G S
Sbjct: 488 RDSELKKDRGTS 499
Score = 82.0 bits (201), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 60/254 (23%), Positives = 124/254 (48%), Gaps = 4/254 (1%)
Query: 34 EKNVVSFTTMIDGYAKAGDMAAARFLFEQATEKDVVAWSALISGYVQNGQPNQALKVFLE 93
E ++++ +I+ Y+K + AR +F++ K VV+W+ +I + + +AL +F++
Sbjct: 88 ETDILTSNMLINMYSKCSLVHDARIVFDEMPVKSVVSWNTMIGALTRIAKEQEALMLFIQ 147
Query: 94 MESKNVKPDEFILVSLMSATS-QLGHLELAQWVDSYVSKSSIDLQQDHVIAALLDMNAKC 152
M + +EF + S++ + + LE Q + ++ K S+D V ALL + AKC
Sbjct: 148 MLREGTLFNEFTISSVLCECAFKCAILECMQ-LHAFSIKVSVD-SNCFVGTALLHVYAKC 205
Query: 153 GNMDRALKLFKEMPKRDLVSYCSMIQGLSIHGCGEDAVRLFNSMLMEGLVPDEVAFTIIL 212
++ A K+F+ MP+ + V++ S++ G +G E A+ LF + G D + +
Sbjct: 206 SSIKDASKMFESMPETNAVTWSSILAGYVQNGLHEAALLLFRDYQLMGFEQDAFLISSAV 265
Query: 213 TACSHSGLVDEGWNYFQSMKQKYGISPSPDHFACMVDLLSRSGHLGDAYELMKSMHEPHA 272
AC+ + EG ++ K G + + ++D+ ++ G + +AY + +
Sbjct: 266 CACAGLATLIEG-KQVHAISCKSGFGSNIYVTSSLIDMYAKCGCIREAYIVFQGEELRSI 324
Query: 273 GAWGALLGACKLHG 286
W A++ H
Sbjct: 325 VLWNAMISGFGRHA 338
>Medtr1g084570.1 | PPR containing plant-like protein | HC |
chr1:37638715-37636265 | 20130731
Length = 606
Score = 217 bits (553), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 115/310 (37%), Positives = 182/310 (58%), Gaps = 3/310 (0%)
Query: 34 EKNVVSFTTMIDGYAKAGDMAAARFLFEQATEKDVVAWSALISGYVQNGQPNQALKVFLE 93
E N+ ++D Y + + A+ LF + T+KD + W+ LI+G+ + ++L +F +
Sbjct: 242 ESNLPVMNAILDMYCRCRCASEAKQLFGEMTQKDTITWNTLIAGF-ETLDSYESLCIFSQ 300
Query: 94 MESKNVKPDEFILVSLMSATSQLGHLELAQWVDSYVSKSSIDLQQDHVIAALLDMNAKCG 153
M S+ P+ F S+++A + L L Q + + +D + AL+DM AKCG
Sbjct: 301 MVSEGFSPNCFTFTSVIAACANLAILYCGQQLHGGIIHRGLD-NNLELSNALIDMYAKCG 359
Query: 154 NMDRALKLFKEMPKRDLVSYCSMIQGLSIHGCGEDAVRLFNSMLMEGLVPDEVAFTIILT 213
N+ + K+F M +LVS+ SM+ G HG G++AV LFN M+ G+ PD++ F +L+
Sbjct: 360 NVADSHKIFSGMRHTNLVSWTSMMIGYGAHGHGKEAVDLFNEMVGSGIKPDKIVFMAVLS 419
Query: 214 ACSHSGLVDEGWNYFQSMKQKYGISPSPDHFACMVDLLSRSGHLGDAYELMKSM-HEPHA 272
ACSH+GLVDEG YF+ M Y ++P D +AC+VDLLSR+G + +AYEL+++M +P
Sbjct: 420 ACSHAGLVDEGLRYFRLMTSYYNVAPDRDIYACVVDLLSRAGRVKEAYELIENMPFKPDE 479
Query: 273 GAWGALLGACKLHGDSDLGEIVANQLFELEPQNAANYILLSNIYAAAERWIDVSLVRSRM 332
W ALLGACK + + ++ A ++ E++P A Y+LLSN AA W D + +R M
Sbjct: 480 SIWVALLGACKKYKQPSIQKLAALKVLEMKPNKAGTYVLLSNFSAAEGNWADFASLRKLM 539
Query: 333 RERSVQKIPG 342
R +K G
Sbjct: 540 RSTKSKKEVG 549
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 63/249 (25%), Positives = 114/249 (45%), Gaps = 3/249 (1%)
Query: 35 KNVVSFTT-MIDGYAKAGDMAAARFLFEQATEKDVVAWSALISGYVQNGQPNQALKVFLE 93
K++ TT +I Y G A LF++ +DV+AW+++I+GY ++A VF
Sbjct: 38 KDLTGLTTDLIKSYFDKGSFEEAHTLFDEMPHRDVIAWTSMITGYTSCNHHSRAWNVFTN 97
Query: 94 MESKNVKPDEFILVSLMSATSQLGHLELAQWVDSYVSKSSIDLQQDHVIAALLDMNAKCG 153
M VKP+ F + +++ A L L + V K +V AL+DM A C
Sbjct: 98 MLRDGVKPNAFTVSAVLKACKSLKALLCGKLVHGLAIKIGTQGSSIYVDNALMDMYATCC 157
Query: 154 N-MDRALKLFKEMPKRDLVSYCSMIQGLSIHGCGEDAVRLFNSMLMEGLVPDEVAFTIIL 212
+ MD A +F+++ ++ VS+ ++I G + +R+F M ME +F+I +
Sbjct: 158 DSMDNARLVFEDIGTKNAVSWTTLITGYTHRRDAFGGLRVFRQMFMEEGELSPFSFSIAV 217
Query: 213 TACSHSGLVDEGWNYFQSMKQKYGISPSPDHFACMVDLLSRSGHLGDAYELMKSMHEPHA 272
+AC+ G + G ++ +G + ++D+ R +A +L M +
Sbjct: 218 SACASIGSSNLGKQVHAAVIN-HGFESNLPVMNAILDMYCRCRCASEAKQLFGEMTQKDT 276
Query: 273 GAWGALLGA 281
W L+
Sbjct: 277 ITWNTLIAG 285
Score = 65.1 bits (157), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 36/141 (25%), Positives = 77/141 (54%), Gaps = 2/141 (1%)
Query: 27 GVFDAMPEKNVVSFTTMIDGYAKAGDMAAARFLFEQATEKDVVAWSALISGYVQNGQPNQ 86
G+ + N+ +ID YAK G++A + +F ++V+W++++ GY +G +
Sbjct: 335 GIIHRGLDNNLELSNALIDMYAKCGNVADSHKIFSGMRHTNLVSWTSMMIGYGAHGHGKE 394
Query: 87 ALKVFLEMESKNVKPDEFILVSLMSATSQLGHL-ELAQWVDSYVSKSSIDLQQDHVIAAL 145
A+ +F EM +KPD+ + ++++SA S G + E ++ S ++ +D + A +
Sbjct: 395 AVDLFNEMVGSGIKPDKIVFMAVLSACSHAGLVDEGLRYFRLMTSYYNVAPDRD-IYACV 453
Query: 146 LDMNAKCGNMDRALKLFKEMP 166
+D+ ++ G + A +L + MP
Sbjct: 454 VDLLSRAGRVKEAYELIENMP 474
>Medtr5g022740.1 | PPR containing plant-like protein | HC |
chr5:8999294-8995144 | 20130731
Length = 665
Score = 216 bits (551), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 135/361 (37%), Positives = 201/361 (55%), Gaps = 44/361 (12%)
Query: 14 CGFVKDGDLSSARGVFDAMPEKNVVSFTTMIDGYAKAGDMAAARFLFEQATEKDVVAWSA 73
CG+V+ AR +FD M +++VS+ +MIDGY K GD++AA LF+ E+++V W+
Sbjct: 185 CGYVE-----VARVMFDGMVSRDLVSWNSMIDGYVKVGDLSAAHKLFDVMPERNLVTWNC 239
Query: 74 LISGYVQNGQPNQALKVFLEMESKNVKPDEFILVSLMSATSQLGHLELAQWVDSYV---- 129
LISGY + P ALK+F EM ++ + +V ++A + G L+ + V +
Sbjct: 240 LISGYSKGRNPGYALKLFREMGRLRIRENARTMVCAVTACGRSGRLKEGKSVHGSMIRLF 299
Query: 130 SKSSIDLQQDHVIAALLDMNAKCGNMDRALKLFKEMPKRDLVSYCSMIQGLSIHGCGEDA 189
+SS+ L AL+DM KCG ++ A K+F+ M R+LVS+ +MI G IHG ED
Sbjct: 300 MRSSLILD-----TALIDMYCKCGRVEAASKVFERMSSRNLVSWNAMILGHCIHGNPEDG 354
Query: 190 VRLFNSML-ME----------------GLV---PDEVAFTIILTACSHSGLVDEGWNYFQ 229
+ LF+ M+ ME GLV PDE+ F IL AC+ + L+ EG +YF+
Sbjct: 355 LSLFDLMVGMERVKGEVEVDESSSADRGLVRLLPDEITFIGILCACARAELLSEGRSYFK 414
Query: 230 SMKQKYGISPSPDHFACMVDLLSRSGHLGDAYELMKSM--------HEPHAGAWGALLGA 281
M +G+ P+ HF CM +LL+ G + +A E +K+M HE + W +LLG
Sbjct: 415 QMIDVFGLKPNFAHFWCMANLLANVGLIDEAEECLKNMAKFDGYISHE--SLLWASLLGL 472
Query: 282 CKLHGDSDLGEIVANQLFELEPQNAANYILLSNIYAAAERWIDVSLVRSRMRERSVQKIP 341
C+ D LGE +A L + +P N A Y L IYA A +W +VS V+ M+ER + IP
Sbjct: 473 CRFKRDVYLGEQIAKLLIDTDPNNLAYYQFLLIIYAVAAQWENVSRVQKLMKERKLDIIP 532
Query: 342 G 342
G
Sbjct: 533 G 533
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 62/257 (24%), Positives = 109/257 (42%), Gaps = 35/257 (13%)
Query: 67 DVVAWSALISGYVQNGQPNQALKVFLEMESKNVKPDEFILVSLMSATSQLGHLELAQWVD 126
D + +I+ Y + P++A+ + + + VSL+SA S++ ++ +
Sbjct: 101 DTFCVNTVINSYCNSYVPHKAIVFYFSSLKIGFFANSYTFVSLISACSKMSCVDNGKMCH 160
Query: 127 SYVSKSSIDLQQDHVIAALLDMNAKCGNMDRALKLFKEMPKRDLVSYCSMIQGLSIHGCG 186
K+ +D V +L M CG ++ A +F M RDLVS+ SMI G G
Sbjct: 161 GQAVKNGVDFVLP-VENSLAHMYGSCGYVEVARVMFDGMVSRDLVSWNSMIDGYVKVGDL 219
Query: 187 EDAVRLFNSMLMEGLVP-----------------------------DEVAFTII--LTAC 215
A +LF+ M LV E A T++ +TAC
Sbjct: 220 SAAHKLFDVMPERNLVTWNCLISGYSKGRNPGYALKLFREMGRLRIRENARTMVCAVTAC 279
Query: 216 SHSGLVDEGWNYFQSMKQKYGISPSPDHFACMVDLLSRSGHLGDAYELMKSMHEPHAGAW 275
SG + EG + SM + + + S ++D+ + G + A ++ + M + +W
Sbjct: 280 GRSGRLKEGKSVHGSMIRLF-MRSSLILDTALIDMYCKCGRVEAASKVFERMSSRNLVSW 338
Query: 276 GA-LLGACKLHGDSDLG 291
A +LG C +HG+ + G
Sbjct: 339 NAMILGHC-IHGNPEDG 354
>Medtr4g094645.1 | pentatricopeptide (PPR) repeat protein | HC |
chr4:38635968-38632937 | 20130731
Length = 694
Score = 216 bits (551), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 127/390 (32%), Positives = 209/390 (53%), Gaps = 47/390 (12%)
Query: 1 MPQRNVASWNAMLCGFVKDGDLSSARGVFDAMPEKNVVSFTTMIDGYAKAGDMAAA---- 56
MP+RN S N M+ +++ G++ +A+ +FD M E+NV ++ M+ G K G A
Sbjct: 139 MPRRNYMSCNIMIKAYLEMGNIENAKNLFDEMTERNVATWNAMVTGLVKFGLNEEALLFS 198
Query: 57 -------------------------------RF--LFEQATEK--------DVVAWSALI 75
RF + E+ ++VAW+ L+
Sbjct: 199 RMNVLGFVPDEYSFGSVLRGCAHLRALSVGDRFTLMLRNVGERIIKWMPNCNLVAWNTLM 258
Query: 76 SGYVQNGQPNQALKVFLEMESKNVKPDEFILVSLMSATSQLGHLELAQWVDSYVSKSSID 135
+G QN + L + M+ +PD VS++S+ S+L L + + + V K+
Sbjct: 259 AGKAQNRCFDGVLDHYCMMKMAGYRPDRITFVSVISSCSELATLCQGKQIHAEVIKAGAS 318
Query: 136 LQQDHVIAALLDMNAKCGNMDRALKLFKEMPKRDLVSYCSMIQGLSIHGCGEDAVRLFNS 195
VI++L+ M +KCG++ ++K F E +RD+V + SMI HG E A++LFN
Sbjct: 319 -SVVTVISSLVSMYSKCGSLQDSIKAFLECEERDVVLWSSMIAAYGFHGQCEKAIKLFND 377
Query: 196 MLMEGLVPDEVAFTIILTACSHSGLVDEGWNYFQSMKQKYGISPSPDHFACMVDLLSRSG 255
E + +EV F +L ACSHSGL D+G ++F M +KYG+ +H+ C+VDLL RSG
Sbjct: 378 KEKENMAGNEVTFLSLLYACSHSGLKDKGLDFFDMMVEKYGLKARLEHYTCVVDLLGRSG 437
Query: 256 HLGDAYELMKSMH-EPHAGAWGALLGACKLHGDSDLGEIVANQLFELEPQNAANYILLSN 314
L +A +++SM A W LL ACK+H + ++ VA ++ ++PQ+ A+Y+L++
Sbjct: 438 CLEEAETIIRSMPVSADAIIWKTLLSACKIHKNEEMARRVAEEVLRIDPQDPASYVLIAG 497
Query: 315 IYAAAERWIDVSLVRSRMRERSVQKIPGCS 344
I+A+A+RW +VS VR M+++ V+K PG S
Sbjct: 498 IHASAKRWQNVSEVRRAMKDKMVKKEPGVS 527
Score = 98.6 bits (244), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 78/313 (24%), Positives = 144/313 (46%), Gaps = 34/313 (10%)
Query: 10 NAMLCGFVKDGDLSSARGVFDAMPEKNVVSFTTMIDGYAKAGDMAAARFLFEQATEKDVV 69
N +L + K G+L++A +FD MP +N +S MI Y + G++ A+ LF++ TE++V
Sbjct: 117 NHLLNFYSKFGELNNAVKLFDRMPRRNYMSCNIMIKAYLEMGNIENAKNLFDEMTERNVA 176
Query: 70 AWSALISGYVQNGQPNQALKVFLEMESKNVKPDEFILVSLMSATSQLGHLELAQWVDSYV 129
W+A+++G V+ G +AL +F M PDE+ S++ + L L +
Sbjct: 177 TWNAMVTGLVKFGLNEEAL-LFSRMNVLGFVPDEYSFGSVLRGCAHLRALSVG------- 228
Query: 130 SKSSIDLQQDHVIAALLDMNAKCGNMDRALKLFKEMPKRDLVSYCSMIQGLSIHGCGEDA 189
D L ++ ++ K MP +LV++ +++ G + + C +
Sbjct: 229 ---------DRFTLMLRNVGE---------RIIKWMPNCNLVAWNTLMAGKAQNRCFDGV 270
Query: 190 VRLFNSMLMEGLVPDEVAFTIILTACSHSGLVDEGWNYFQSMKQKYGISPSPDHFACMVD 249
+ + M M G PD + F ++++CS + +G + K G S + +V
Sbjct: 271 LDHYCMMKMAGYRPDRITFVSVISSCSELATLCQG-KQIHAEVIKAGASSVVTVISSLVS 329
Query: 250 LLSRSGHLGDAYELMKSMHEPHAGAWGALLGACKLHGDSDLGEIVANQLF-ELEPQNAA- 307
+ S+ G L D+ + E W +++ A HG + A +LF + E +N A
Sbjct: 330 MYSKCGSLQDSIKAFLECEERDVVLWSSMIAAYGFHGQCE----KAIKLFNDKEKENMAG 385
Query: 308 -NYILLSNIYAAA 319
LS +YA +
Sbjct: 386 NEVTFLSLLYACS 398
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 43/148 (29%), Positives = 78/148 (52%), Gaps = 10/148 (6%)
Query: 74 LISGYVQNGQPNQALKVFLEMES----KNVKPDEFILVSLMSATSQLGHLELAQWVDSYV 129
L S +Q+ P ++ + ++ S D+FI L++ S+ G L A + +
Sbjct: 80 LFSILIQSCIPTNSVSLGKQLHSLIFTSGYSSDKFISNHLLNFYSKFGELNNAVKLFDRM 139
Query: 130 SKSSIDLQQDHVIAALLDMNAKCGNMDRALKLFKEMPKRDLVSYCSMIQGLSIHGCGEDA 189
+ + + + +I A L+M GN++ A LF EM +R++ ++ +M+ GL G E+A
Sbjct: 140 PRRNY-MSCNIMIKAYLEM----GNIENAKNLFDEMTERNVATWNAMVTGLVKFGLNEEA 194
Query: 190 VRLFNSMLMEGLVPDEVAFTIILTACSH 217
+ LF+ M + G VPDE +F +L C+H
Sbjct: 195 L-LFSRMNVLGFVPDEYSFGSVLRGCAH 221
>Medtr4g014050.1 | PPR containing plant-like protein | HC |
chr4:3891221-3897546 | 20130731
Length = 935
Score = 215 bits (547), Expect = 6e-56, Method: Compositional matrix adjust.
Identities = 116/319 (36%), Positives = 183/319 (57%), Gaps = 7/319 (2%)
Query: 27 GVFDAMPEKNVVSFTTMIDGYAKAGDMAAARFLFEQATEKDVVAWSALISGYVQNGQPNQ 86
G+ DA+ N ++I Y+K G + A +F+ T KD+++WS +IS Y Q +
Sbjct: 383 GLVDALSVSN-----SIITLYSKCGLLQEASLVFDGMTRKDIISWSTIISVYCQGSHAKE 437
Query: 87 ALKVFLEMESKNVKPDEFILVSLMSATSQLGHLELAQWVDSYVSKSSIDLQQDHVIAALL 146
A M + KP+EF L S++S + LE + V +Y +D + V +AL+
Sbjct: 438 AFNYLSWMSREGPKPNEFALASVLSVCGSMALLEPGKQVHAYALCIGLD-HETMVHSALI 496
Query: 147 DMNAKCGNMDRALKLFKEMPKRDLVSYCSMIQGLSIHGCGEDAVRLFNSMLMEGLVPDEV 206
M ++ GN+ A K+F + D+VS+ +MI G + HG ++A+ LF ++ GL+PD V
Sbjct: 497 SMYSRSGNLQEASKIFDSIKNNDIVSWTAMINGYAEHGYSQEAISLFENISSVGLMPDYV 556
Query: 207 AFTIILTACSHSGLVDEGWNYFQSMKQKYGISPSPDHFACMVDLLSRSGHLGDAYELMKS 266
F ILTAC+H+GLVD G+ Y++ M +Y I+PS +H+ C++DLL R+G L +A ++++
Sbjct: 557 TFIGILTACNHAGLVDLGFYYYKLMTNEYQIAPSKEHYGCIIDLLCRAGRLSEAEHMVRN 616
Query: 267 MHEPHAG-AWGALLGACKLHGDSDLGEIVANQLFELEPQNAANYILLSNIYAAAERWIDV 325
M P W LL AC+ HGD D A Q+ L P +A +I L+NIY+A+ R +
Sbjct: 617 MPFPCDDVVWSTLLRACRDHGDLDRAIWAAEQMLRLHPNSAGAHITLANIYSASGRREEA 676
Query: 326 SLVRSRMRERSVQKIPGCS 344
+ VR M+ + V K PG S
Sbjct: 677 AHVRKLMKSKGVIKEPGWS 695
Score = 93.6 bits (231), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 79/334 (23%), Positives = 139/334 (41%), Gaps = 55/334 (16%)
Query: 1 MPQRNVASWNAMLCGFVKDGDLSSARGVFDAMPEKNV----VSFTTMIDGYAKAGDMAAA 56
M RNV SW A++ G V G F M V +F + A++G +
Sbjct: 212 MTTRNVVSWTAVIVGLVHAGCSLDGLSYFSEMWRSKVGYDSHTFAVALKASAESGLLHYG 271
Query: 57 RF-----------------------------------LFEQATEKDVVAWSALISGYVQN 81
+ LF + + DVV+W+ LI YVQ
Sbjct: 272 KAIHAQTIKQGFNETAYVVNTLGTMYSKCRKPDYVMRLFGKMSTPDVVSWTNLIMTYVQM 331
Query: 82 GQPNQALKVFLEMESKNVKPDEFILVSLMSATSQLGHLELAQWVDSYVSKSSIDLQQDHV 141
G +AL F M +V P+E+ S++SA + L + + + + + + + V
Sbjct: 332 GDEERALDAFKRMRKSDVSPNEYTFASVISACANLAITKWGEQIHGHALRLGL-VDALSV 390
Query: 142 IAALLDMNAKCGNMDRALKLFKEMPKRDLVSYCSMIQGLSIHGCGEDAVRLFNS---MLM 198
+++ + +KCG + A +F M ++D++S+ ++I S++ G A FN M
Sbjct: 391 SNSIITLYSKCGLLQEASLVFDGMTRKDIISWSTII---SVYCQGSHAKEAFNYLSWMSR 447
Query: 199 EGLVPDEVAFTIILTACSHSGLVDEGWNYFQSMKQKYGISPSPDH----FACMVDLLSRS 254
EG P+E A +L+ C L++ G Y + DH + ++ + SRS
Sbjct: 448 EGPKPNEFALASVLSVCGSMALLEPG-----KQVHAYALCIGLDHETMVHSALISMYSRS 502
Query: 255 GHLGDAYELMKSMHEPHAGAWGALLGACKLHGDS 288
G+L +A ++ S+ +W A++ HG S
Sbjct: 503 GNLQEASKIFDSIKNNDIVSWTAMINGYAEHGYS 536
Score = 86.3 bits (212), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 66/260 (25%), Positives = 121/260 (46%), Gaps = 10/260 (3%)
Query: 32 MPEKNVVSFTTMIDGYAKAGDMAAARFLFEQATEKDVVAWSALISGYVQNGQPNQALKVF 91
MPE N + + K G + AR +F + + +D ++W+ LI+GYV N+AL +F
Sbjct: 84 MPELN-----SQLKQLMKLGKICEARDMFNKMSHRDEISWTNLIAGYVNAANSNEALILF 138
Query: 92 LEM-ESKNVKPDEFILVSLMSATSQLGHLELAQWVDSYVSKSSIDLQQDHVIAALLDMNA 150
M ++ D+F++ + A + ++ + + + KS + + V +AL+DM
Sbjct: 139 SNMWVDSGLQKDQFVVSVALKACALGMNVYFGELLHGFSVKSGL-INSVFVSSALVDMYM 197
Query: 151 KCGNMDRALKLFKEMPKRDLVSYCSMIQGLSIHGCGEDAVRLFNSMLMEGLVPDEVAFTI 210
K G ++ +F+ M R++VS+ ++I GL GC D + F+ M + D F +
Sbjct: 198 KVGKTEQGCSVFENMTTRNVVSWTAVIVGLVHAGCSLDGLSYFSEMWRSKVGYDSHTFAV 257
Query: 211 ILTACSHSGLVDEGWN-YFQSMKQKYGISPSPDHFACMVDLLSRSGHLGDAYELMKSMHE 269
L A + SGL+ G + Q++KQ G + + + + S+ L M
Sbjct: 258 ALKASAESGLLHYGKAIHAQTIKQ--GFNETAYVVNTLGTMYSKCRKPDYVMRLFGKMST 315
Query: 270 PHAGAWGALLGACKLHGDSD 289
P +W L+ GD +
Sbjct: 316 PDVVSWTNLIMTYVQMGDEE 335
Score = 82.0 bits (201), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 57/239 (23%), Positives = 105/239 (43%), Gaps = 2/239 (0%)
Query: 41 TTMIDGYAKAGDMAAARFLFEQATEKDVVAWSALISGYVQNGQPNQALKVFLEMESKNVK 100
+ ++D Y K G +FE T ++VV+W+A+I G V G L F EM V
Sbjct: 190 SALVDMYMKVGKTEQGCSVFENMTTRNVVSWTAVIVGLVHAGCSLDGLSYFSEMWRSKVG 249
Query: 101 PDEFILVSLMSATSQLGHLELAQWVDSYVSKSSIDLQQDHVIAALLDMNAKCGNMDRALK 160
D + A+++ G L + + + K + + +V+ L M +KC D ++
Sbjct: 250 YDSHTFAVALKASAESGLLHYGKAIHAQTIKQGFN-ETAYVVNTLGTMYSKCRKPDYVMR 308
Query: 161 LFKEMPKRDLVSYCSMIQGLSIHGCGEDAVRLFNSMLMEGLVPDEVAFTIILTACSHSGL 220
LF +M D+VS+ ++I G E A+ F M + P+E F +++AC++ +
Sbjct: 309 LFGKMSTPDVVSWTNLIMTYVQMGDEERALDAFKRMRKSDVSPNEYTFASVISACANLAI 368
Query: 221 VDEGWNYFQSMKQKYGISPSPDHFACMVDLLSRSGHLGDAYELMKSMHEPHAGAWGALL 279
G + G+ + ++ L S+ G L +A + M +W ++
Sbjct: 369 TKWG-EQIHGHALRLGLVDALSVSNSIITLYSKCGLLQEASLVFDGMTRKDIISWSTII 426
>Medtr3g101700.1 | PPR containing plant-like protein | HC |
chr3:46826943-46824374 | 20130731
Length = 729
Score = 214 bits (546), Expect = 7e-56, Method: Compositional matrix adjust.
Identities = 110/303 (36%), Positives = 179/303 (59%), Gaps = 2/303 (0%)
Query: 43 MIDGYAKAGDMAAARFLFEQATEKDVVAWSALISGYVQNGQPNQALKVFLEMESKNVKPD 102
+I Y++ ++ AA LF EK ++ W+++ISG VQ G+ + A+++F EM KPD
Sbjct: 394 LISLYSRFDEIEAALSLFYDMREKPLITWNSMISGCVQAGKSSDAMELFSEMSMCGKKPD 453
Query: 103 EFILVSLMSATSQLGHLELAQWVDSYVSKSSIDLQQDHVIAALLDMNAKCGNMDRALKLF 162
+ SL+S QLG+L + + + SY+ ++++ ++ D + AL+DM +KCG +D A K+F
Sbjct: 454 AITIASLLSGCCQLGNLRIGETLHSYILRNNVRVE-DFIGTALIDMYSKCGRLDYAEKVF 512
Query: 163 KEMPKRDLVSYCSMIQGLSIHGCGEDAVRLFNSMLMEGLVPDEVAFTIILTACSHSGLVD 222
+ L ++ ++I G S++G A ++ + +GL PD++ F +L AC+H GLV
Sbjct: 513 YNIKDPCLATWNAIISGYSLYGLEHTAFGCYSKLQEQGLKPDKITFLGVLAACTHGGLVY 572
Query: 223 EGWNYFQSMKQKYGISPSPDHFACMVDLLSRSGHLGDAYELMKSMH-EPHAGAWGALLGA 281
G YF M ++YG+ PS H+AC+V LL + G +A E + M +P + WGALL A
Sbjct: 573 LGLEYFNIMTKEYGLMPSLQHYACIVALLGKEGLFKEAIEFINKMEIQPDSAVWGALLNA 632
Query: 282 CKLHGDSDLGEIVANQLFELEPQNAANYILLSNIYAAAERWIDVSLVRSRMRERSVQKIP 341
C + + LGE +A +LF L +N Y+L+SN+YA RW DV+ VR M++
Sbjct: 633 CCIQREVKLGECLAKKLFLLNHKNGGFYVLMSNLYAIVGRWDDVARVREMMKDSGGDGCS 692
Query: 342 GCS 344
G S
Sbjct: 693 GVS 695
Score = 101 bits (252), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 57/174 (32%), Positives = 99/174 (56%), Gaps = 1/174 (0%)
Query: 41 TTMIDGYAKAGDMAAARFLFEQATEKDVVAWSALISGYVQNGQPNQALKVFLEMESKNVK 100
T++ID Y K G + AR +F+Q + +DVV+W+ LI GY QNG A+++F++M +N K
Sbjct: 95 TSLIDLYMKLGFTSHARNMFDQMSYRDVVSWNVLICGYSQNGYLYHAIQLFVDMLRENFK 154
Query: 101 PDEFILVSLMSATSQLGHLELAQWVDSYVSKSSIDLQQDHVIAALLDMNAKCGNMDRALK 160
P++ +VSL+ + + + + + K+ L H+ AL+ M AKC +++ +
Sbjct: 155 PNQTTIVSLLPSCGCFELIFQGRSIHGFGIKAGFGL-DSHLNNALMSMYAKCDDLEASQL 213
Query: 161 LFKEMPKRDLVSYCSMIQGLSIHGCGEDAVRLFNSMLMEGLVPDEVAFTIILTA 214
LF EM ++ +VS+ +MI +G + A+ F ML EG P V +++A
Sbjct: 214 LFDEMDEKSVVSWNTMIGVYGQNGLFDKAILYFKEMLKEGFHPSSVTIMNLVSA 267
Score = 100 bits (248), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 86/327 (26%), Positives = 138/327 (42%), Gaps = 47/327 (14%)
Query: 1 MPQRNVASWNAMLCGFVKDGDLSSARGVFDAMPEKN-------VVS-------FTTMIDG 46
M R+V SWN ++CG+ ++G L A +F M +N +VS F + G
Sbjct: 117 MSYRDVVSWNVLICGYSQNGYLYHAIQLFVDMLRENFKPNQTTIVSLLPSCGCFELIFQG 176
Query: 47 -------------------------YAKAGDMAAARFLFEQATEKDVVAWSALISGYVQN 81
YAK D+ A++ LF++ EK VV+W+ +I Y QN
Sbjct: 177 RSIHGFGIKAGFGLDSHLNNALMSMYAKCDDLEASQLLFDEMDEKSVVSWNTMIGVYGQN 236
Query: 82 GQPNQALKVFLEMESKNVKPDEFILVSLMSATSQLGHLELAQWVDSYVSKSSIDLQQDHV 141
G ++A+ F EM + P +++L+SA + + V YV K V
Sbjct: 237 GLFDKAILYFKEMLKEGFHPSSVTIMNLVSANA------FPENVHCYVVKCGFT-NDASV 289
Query: 142 IAALLDMNAKCGNMDRALKLFKEMPKRDLVSYCSMIQGLSIHGCGEDAVRLFNSMLMEGL 201
+ +L+ + AK G + A +L+K P +DL++ ++I S G E AV F + +
Sbjct: 290 VTSLVCLYAKQGFTNTAKQLYKYYPTKDLITLTAIISSYSEKGDIESAVECFIQTIQLDI 349
Query: 202 VPDEVAFTIILTACSHSGLVDEGWNYFQSMKQKYGISPSPDHFACMVDLLSRSGHLGDAY 261
PD VA +L ++ G F K G+S ++ L SR + A
Sbjct: 350 KPDAVALIGVLHGITNPSHFAIGCT-FHGYGVKSGLSNDCLVANGLISLYSRFDEIEAAL 408
Query: 262 ELMKSMHEPHAGAWGALLGACKLHGDS 288
L M E W +++ C G S
Sbjct: 409 SLFYDMREKPLITWNSMISGCVQAGKS 435
Score = 99.8 bits (247), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 76/320 (23%), Positives = 142/320 (44%), Gaps = 37/320 (11%)
Query: 1 MPQRNVASWNAMLCGFVKDGDLSSARGVFDAMPEK----------NVVS----------- 39
M +++V SWN M+ + ++G A F M ++ N+VS
Sbjct: 218 MDEKSVVSWNTMIGVYGQNGLFDKAILYFKEMLKEGFHPSSVTIMNLVSANAFPENVHCY 277
Query: 40 ------------FTTMIDGYAKAGDMAAARFLFEQATEKDVVAWSALISGYVQNGQPNQA 87
T+++ YAK G A+ L++ KD++ +A+IS Y + G A
Sbjct: 278 VVKCGFTNDASVVTSLVCLYAKQGFTNTAKQLYKYYPTKDLITLTAIISSYSEKGDIESA 337
Query: 88 LKVFLEMESKNVKPDEFILVSLMSATSQLGHLELAQWVDSYVSKSSIDLQQDHVIA-ALL 146
++ F++ ++KPD L+ ++ + H + Y KS L D ++A L+
Sbjct: 338 VECFIQTIQLDIKPDAVALIGVLHGITNPSHFAIGCTFHGYGVKSG--LSNDCLVANGLI 395
Query: 147 DMNAKCGNMDRALKLFKEMPKRDLVSYCSMIQGLSIHGCGEDAVRLFNSMLMEGLVPDEV 206
+ ++ ++ AL LF +M ++ L+++ SMI G G DA+ LF+ M M G PD +
Sbjct: 396 SLYSRFDEIEAALSLFYDMREKPLITWNSMISGCVQAGKSSDAMELFSEMSMCGKKPDAI 455
Query: 207 AFTIILTACSHSGLVDEGWNYFQSMKQKYGISPSPDHFACMVDLLSRSGHLGDAYELMKS 266
+L+ C G + G S + + ++D+ S+ G L A ++ +
Sbjct: 456 TIASLLSGCCQLGNLRIG-ETLHSYILRNNVRVEDFIGTALIDMYSKCGRLDYAEKVFYN 514
Query: 267 MHEPHAGAWGALLGACKLHG 286
+ +P W A++ L+G
Sbjct: 515 IKDPCLATWNAIISGYSLYG 534
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 50/204 (24%), Positives = 93/204 (45%), Gaps = 12/204 (5%)
Query: 87 ALKVFLEMESKNVKPDEFILVSLMSA---TSQLGHLE-----LAQWVDSYVSKSSIDLQQ 138
AL +F ++ NV P+EF L+ A + H A+ + + K ++ Q
Sbjct: 32 ALVIFRQILQANVNPNEFTFSLLIKAYLSSPSFTHCPSTAALQARQIQTQCLKRGVN-QF 90
Query: 139 DHVIAALLDMNAKCGNMDRALKLFKEMPKRDLVSYCSMIQGLSIHGCGEDAVRLFNSMLM 198
HV +L+D+ K G A +F +M RD+VS+ +I G S +G A++LF ML
Sbjct: 91 IHVHTSLIDLYMKLGFTSHARNMFDQMSYRDVVSWNVLICGYSQNGYLYHAIQLFVDMLR 150
Query: 199 EGLVPDEVAFTIILTACSHSGLVDEGWNYFQ-SMKQKYGISPSPDHFACMVDLLSRSGHL 257
E P++ +L +C L+ +G + +K +G+ ++ ++ + ++ L
Sbjct: 151 ENFKPNQTTIVSLLPSCGCFELIFQGRSIHGFGIKAGFGLDSHLNN--ALMSMYAKCDDL 208
Query: 258 GDAYELMKSMHEPHAGAWGALLGA 281
+ L M E +W ++G
Sbjct: 209 EASQLLFDEMDEKSVVSWNTMIGV 232
>Medtr8g074780.1 | PPR containing plant-like protein | HC |
chr8:31617312-31615266 | 20130731
Length = 510
Score = 214 bits (545), Expect = 9e-56, Method: Compositional matrix adjust.
Identities = 117/388 (30%), Positives = 214/388 (55%), Gaps = 44/388 (11%)
Query: 1 MPQRNVASWNAMLCGFVKDGDLSSARGVFDAM------PEKNVVSFT------------- 41
+ +R+V WN ++ G+ G + A V++AM P + F
Sbjct: 80 LSERDVFCWNNVIKGYANMGPFAEALHVYNAMRLSGAAPNRYTYPFVLKACGAERDCLKG 139
Query: 42 TMIDG--------------------YAKAGDMAAARFLFEQATEKDVVAWSALISGYVQN 81
+I G YAK ++ A+R +F++ E+D+V+W++++SGY+ N
Sbjct: 140 RIIHGNVVKCGLEFDLFVGNAFVAFYAKCKEIEASRKVFDEMLERDIVSWNSMMSGYIAN 199
Query: 82 GQPNQALKVFLEMESKNVK--PDEFILVSLMSATSQLGHLELAQWVDSYVSKSSIDLQQD 139
G ++A+ +F +M + PD LV+++ A ++ + W+ Y+ K+ + L
Sbjct: 200 GYVDEAVMLFCDMLRDDGIGFPDNATLVTVLPAFAEKADIHAGYWIHCYIVKTGMKLDPA 259
Query: 140 HVIAALLDMNAKCGNMDRALKLFKEMPKRDLVSYCSMIQGLSIHGCGEDAVRLFNSMLME 199
V L+ + + CG + A +F ++P R+++ + ++I+ +HG ++A+ +F ++
Sbjct: 260 -VGCGLITLYSNCGYIRMAKAVFDQIPDRNVIVWSAIIRCYGMHGFAQEALSMFRQLVEL 318
Query: 200 GLVPDEVAFTIILTACSHSGLVDEGWNYFQSMKQKYGISPSPDHFACMVDLLSRSGHLGD 259
GL D + F +L+ACSH+G+ +EGW+ FQ+M + YG+ H+ACMVDLL R+G+L
Sbjct: 319 GLHLDGIVFLSLLSACSHAGMHEEGWHLFQTM-ETYGVVKGEAHYACMVDLLGRAGNLEK 377
Query: 260 AYELMKSMH-EPHAGAWGALLGACKLHGDSDLGEIVANQLFELEPQNAANYILLSNIYAA 318
A EL++SM +P +GALLGA ++H + +L E+ A +LF L+P NA Y++L+ +Y
Sbjct: 378 AMELIQSMPIQPGKNVYGALLGASRIHKNIELAELAAEKLFVLDPNNAGRYVILAQMYED 437
Query: 319 AERWIDVSLVRSRMRERSVQKIPGCSKL 346
RW D + +R +RE+ ++K G S +
Sbjct: 438 EGRWKDAARLRKIIREKEIKKPIGYSSV 465
Score = 85.1 bits (209), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 66/263 (25%), Positives = 120/263 (45%), Gaps = 6/263 (2%)
Query: 43 MIDGYAKAG--DMAAARFLFEQATEKDVVAWSALISGYVQNGQPNQALKVFLEMESKNVK 100
+ID Y++ G ++ AR +F+ +E+DV W+ +I GY G +AL V+ M
Sbjct: 58 LIDKYSQLGGTNVEHARKVFDDLSERDVFCWNNVIKGYANMGPFAEALHVYNAMRLSGAA 117
Query: 101 PDEFILVSLMSATSQLGHLELAQWVDSYVSKSSIDLQQDHVIAALLDMNAKCGNMDRALK 160
P+ + ++ A + + V K ++ V A + AKC ++ + K
Sbjct: 118 PNRYTYPFVLKACGAERDCLKGRIIHGNVVKCGLEFDL-FVGNAFVAFYAKCKEIEASRK 176
Query: 161 LFKEMPKRDLVSYCSMIQGLSIHGCGEDAVRLFNSMLMEGLV--PDEVAFTIILTACSHS 218
+F EM +RD+VS+ SM+ G +G ++AV LF ML + + PD +L A +
Sbjct: 177 VFDEMLERDIVSWNSMMSGYIANGYVDEAVMLFCDMLRDDGIGFPDNATLVTVLPAFAEK 236
Query: 219 GLVDEGWNYFQSMKQKYGISPSPDHFACMVDLLSRSGHLGDAYELMKSMHEPHAGAWGAL 278
+ G+ + K G+ P ++ L S G++ A + + + + W A+
Sbjct: 237 ADIHAGY-WIHCYIVKTGMKLDPAVGCGLITLYSNCGYIRMAKAVFDQIPDRNVIVWSAI 295
Query: 279 LGACKLHGDSDLGEIVANQLFEL 301
+ +HG + + QL EL
Sbjct: 296 IRCYGMHGFAQEALSMFRQLVEL 318
>Medtr2g436470.1 | pentatricopeptide (PPR) repeat protein | HC |
chr2:14170762-14173219 | 20130731
Length = 503
Score = 213 bits (543), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 117/311 (37%), Positives = 184/311 (59%), Gaps = 7/311 (2%)
Query: 36 NVVSFTTMIDGYAKAGDMAAARFLFEQATEKDVVAWSALISGYVQNGQPNQALKVFLEME 95
N+ + +I+ K+G+ A+ +F++ +DVV W+ +I GYV+N + AL +F M
Sbjct: 67 NLFNMNLVIESLVKSGECDIAKKVFDKMPVRDVVTWNTVIGGYVKNLRFLDALSIFRVML 126
Query: 96 SKNVKPDEFILVSLMSATSQLGHLELAQWVDSYVSKSSIDLQQDHVIAALLDMNAKCGNM 155
V+PD F S+++ ++LG A+WV + + ++L + AAL+DM AKCG +
Sbjct: 127 KAKVEPDGFTFASVVTGCARLGSFCNAKWVHGLMVEKKVELNYI-LTAALVDMYAKCGRV 185
Query: 156 DRALKLFKEMPKRDLVS-YCSMIQGLSIHGCGEDAVRLFNSMLMEGLVPDEVAFTIILTA 214
D + ++F E RD VS + +MI GL+IHG DA +F+ M +E ++PD V F IL
Sbjct: 186 DVSKEVF-ECVVRDHVSVWNAMINGLAIHGHALDATVVFSRMEVENVLPDSVTFVGILKG 244
Query: 215 CSHSGLVDEGWNYFQSMKQKYGISPSPDHFACMVDLLSRSGHLGDAYELMKSMH-EPHAG 273
CSH GLV+ G YF+ M+ ++ I P H+ MVDLL R+GHL +AY ++K+M EP
Sbjct: 245 CSHCGLVEVGRKYFEMMQNRFFIQPQLKHYGTMVDLLGRAGHLEEAYSMIKAMSVEPDVV 304
Query: 274 AWGALLGACKLHGDSDLGEIVANQLFELEPQNAANYILLSNIYAAAERWIDVSLVRSRMR 333
W +LL AC++HG +LGE + LE + +++LLSN+Y + + W VR M+
Sbjct: 305 IWRSLLSACRIHGKKELGEFAIANISRLE---SGDFVLLSNMYCSFKNWHGAERVRHMMK 361
Query: 334 ERSVQKIPGCS 344
+ V+K G S
Sbjct: 362 KGGVRKKRGKS 372
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 57/228 (25%), Positives = 99/228 (43%), Gaps = 42/228 (18%)
Query: 1 MPQRNVASWNAMLCGFVKD-----------------------------------GDLSSA 25
MP R+V +WN ++ G+VK+ G +A
Sbjct: 94 MPVRDVVTWNTVIGGYVKNLRFLDALSIFRVMLKAKVEPDGFTFASVVTGCARLGSFCNA 153
Query: 26 RGVFDAMPEK----NVVSFTTMIDGYAKAGDMAAARFLFEQATEKDVVAWSALISGYVQN 81
+ V M EK N + ++D YAK G + ++ +FE V W+A+I+G +
Sbjct: 154 KWVHGLMVEKKVELNYILTAALVDMYAKCGRVDVSKEVFECVVRDHVSVWNAMINGLAIH 213
Query: 82 GQPNQALKVFLEMESKNVKPDEFILVSLMSATSQLGHLELA-QWVDSYVSKSSIDLQQDH 140
G A VF ME +NV PD V ++ S G +E+ ++ + ++ I Q H
Sbjct: 214 GHALDATVVFSRMEVENVLPDSVTFVGILKGCSHCGLVEVGRKYFEMMQNRFFIQPQLKH 273
Query: 141 VIAALLDMNAKCGNMDRALKLFKEMP-KRDLVSYCSMIQGLSIHGCGE 187
++D+ + G+++ A + K M + D+V + S++ IHG E
Sbjct: 274 Y-GTMVDLLGRAGHLEEAYSMIKAMSVEPDVVIWRSLLSACRIHGKKE 320
>Medtr4g108660.1 | PPR containing plant-like protein | HC |
chr4:44998985-45001066 | 20130731
Length = 460
Score = 213 bits (542), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 111/288 (38%), Positives = 171/288 (59%), Gaps = 3/288 (1%)
Query: 1 MPQRNVASWNAMLCGFVKDGDLSSARGVFDAMPEKNVVSFTTMIDGYAKAGDMAAARFLF 60
M Q NV +WNA++ + GD+ A G+F+ MP +N+ S+ TM+ GY KAG + AR +F
Sbjct: 174 MSQPNVVAWNAVVTACFRCGDVEGAWGLFERMPVRNLTSWNTMLAGYVKAGQLWLARRVF 233
Query: 61 EQATEKDVVAWSALISGYVQNGQPNQALKVFLEMESKNVKPDEFILVSLMSATSQLGHLE 120
+ +D +WS +I G+ ++G + A F E+ +P E L ++SA +Q G E
Sbjct: 234 CEMKMRDDASWSTMIVGFAKSGSFHDAFGFFKELLRDRNRPSEVSLTGVLSACAQAGAFE 293
Query: 121 LAQWVDSYVSKSSIDLQQDHVIAALLDMNAKCGNMDRALKLFKEMP-KRDLVSYCSMIQG 179
+ + ++ K+ L V AL+D +KCGN+D A +F+ M ++ +VS+ SMI
Sbjct: 294 FGKILHGFMEKAGF-LCIVSVNNALIDTYSKCGNVDMAKLVFQHMSAEKCIVSWTSMIAA 352
Query: 180 LSIHGCGEDAVRLFNSMLMEGLVPDEVAFTIILTACSHSGLVDEGWNYFQSMKQKYGISP 239
L++HG ++A+R+F+ M G+ PD V F +L ACSHSGLV++G F M+ YGI P
Sbjct: 353 LAMHGRADEAIRVFHEMEESGVRPDGVTFISLLYACSHSGLVEQGCALFSKMRNFYGIEP 412
Query: 240 SPDHFACMVDLLSRSGHLGDAYELMKSMH-EPHAGAWGALLGACKLHG 286
+ +H+ CMVDL R+ L AYE ++ M P+ W LLGAC +HG
Sbjct: 413 AIEHYGCMVDLYGRAARLQKAYEFIRQMPILPNVIIWRTLLGACSIHG 460
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 61/246 (24%), Positives = 106/246 (43%), Gaps = 11/246 (4%)
Query: 45 DGYAKAGDMAAARFLFEQATEKDVVAWSALISGYVQNGQPNQALKVFLEMESKNVKPDEF 104
DG +K + F + + + LIS Y + G A KVF EM NV
Sbjct: 125 DGCSKRQGIQLHSHAFRHGFDDHIFVGTTLISMYAECGCYEYARKVFDEMSQPNVVAWN- 183
Query: 105 ILVSLMSATSQLGHLELAQWVDSYVSKSSIDLQQDHVIAALLDMNAKCGNMDRALKLFKE 164
++++A + G +E A + + ++ +L K G + A ++F E
Sbjct: 184 ---AVVTACFRCGDVEGAWGLFERMPVRNLTSWN-----TMLAGYVKAGQLWLARRVFCE 235
Query: 165 MPKRDLVSYCSMIQGLSIHGCGEDAVRLFNSMLMEGLVPDEVAFTIILTACSHSGLVDEG 224
M RD S+ +MI G + G DA F +L + P EV+ T +L+AC+ +G + G
Sbjct: 236 MKMRDDASWSTMIVGFAKSGSFHDAFGFFKELLRDRNRPSEVSLTGVLSACAQAGAFEFG 295
Query: 225 WNYFQSMKQKYGISPSPDHFACMVDLLSRSGHLGDAYELMKSMH-EPHAGAWGALLGACK 283
+K G ++D S+ G++ A + + M E +W +++ A
Sbjct: 296 -KILHGFMEKAGFLCIVSVNNALIDTYSKCGNVDMAKLVFQHMSAEKCIVSWTSMIAALA 354
Query: 284 LHGDSD 289
+HG +D
Sbjct: 355 MHGRAD 360
>Medtr3g006800.1 | pentatricopeptide (PPR) repeat protein | HC |
chr3:874317-871628 | 20130731
Length = 505
Score = 213 bits (541), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 126/389 (32%), Positives = 197/389 (50%), Gaps = 46/389 (11%)
Query: 1 MPQRNVASWNAMLCGFVKDGDLSSARGVFDAMP--------------------------- 33
MPQRN+ SWN M+ + + A VF+A
Sbjct: 61 MPQRNMHSWNIMIASYTHNSMYFDALTVFEAFKRCGVLPDCYTLPPLFKISIRIDECCLG 120
Query: 34 ------------EKNVVSFTTMIDGYAKAGDMAAARFLF-EQATEKDVVAWSALISGYVQ 80
E+ VV ++++ Y K G M+ A +F +D W+ +ISG+ +
Sbjct: 121 WMCHGLVVKLGYEEIVVVNNSVLEFYVKCGTMSQALSVFSNHNAPRDSATWNLMISGFGK 180
Query: 81 NGQPNQALKVFLEM--ESKNVKPDEFILVSLMSATSQLGHLELAQWVDSYVSKSSIDLQQ 138
G ++A+ F EM ++ D L S++SA + G L + V ++ ++
Sbjct: 181 AGLYSEAVHCFREMLKYRNGIELDHMTLPSILSACGKEGDLLKVKEVHGFIVRN-FGFDA 239
Query: 139 DHVIA-ALLDMNAKCGNMDRALKLFKEMPKRDLVSYCSMIQGLSIHGCGEDAVRLFNSML 197
D I AL+D KCG++ + +FK + +LV++ +MI +HG G+++V LF M+
Sbjct: 240 DAPIGNALIDNYGKCGSLKDSENIFKTVCYVNLVTWTTMISCYGMHGKGQESVVLFEKMM 299
Query: 198 MEGLVPDEVAFTIILTACSHSGLVDEGWNYFQSMKQKYGISPSPDHFACMVDLLSRSGHL 257
EG P+ V T IL +CSH GL+D+G F SM YG+ P+ +H+ACMVDL SR G L
Sbjct: 300 DEGFRPNAVTLTAILASCSHCGLLDQGKKIFGSMISDYGLEPTAEHYACMVDLFSRCGRL 359
Query: 258 GDAYELMKSMHEPHAGA--WGALLGACKLHGDSDLGEIVANQLFELEPQNAANYILLSNI 315
+A +L++ M WGALL C +H + +GE+ A+ LF+LEP N +NY+ L I
Sbjct: 360 EEALQLLERMKSSSVTGSMWGALLAGCVMHQNVKIGEVAAHHLFQLEPNNTSNYVALWGI 419
Query: 316 YAAAERWIDVSLVRSRMRERSVQKIPGCS 344
Y + + VS +R +MR+ + K PGCS
Sbjct: 420 YQSRGMVLGVSTIRGKMRDLGLVKTPGCS 448
Score = 78.6 bits (192), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 62/257 (24%), Positives = 112/257 (43%), Gaps = 10/257 (3%)
Query: 36 NVVSFTTMIDGYAKAGDMAAARFLFEQATEKDVVAWSALISGYVQNGQPNQALKVFLEME 95
NV+ T ++ Y K G ++ AR LF++ ++++ +W+ +I+ Y N AL VF +
Sbjct: 34 NVILETDLLLAYTKLGLISHARKLFDKMPQRNMHSWNIMIASYTHNSMYFDALTVFEAFK 93
Query: 96 SKNVKPDEFILVSLMSATSQLGHLELAQWVDSYVSKSSIDLQQDHVIA---ALLDMNAKC 152
V PD + L L + ++ L V K L + ++ ++L+ KC
Sbjct: 94 RCGVLPDCYTLPPLFKISIRIDECCLGWMCHGLVVK----LGYEEIVVVNNSVLEFYVKC 149
Query: 153 GNMDRALKLFKEM-PKRDLVSYCSMIQGLSIHGCGEDAVRLFNSML--MEGLVPDEVAFT 209
G M +AL +F RD ++ MI G G +AV F ML G+ D +
Sbjct: 150 GTMSQALSVFSNHNAPRDSATWNLMISGFGKAGLYSEAVHCFREMLKYRNGIELDHMTLP 209
Query: 210 IILTACSHSGLVDEGWNYFQSMKQKYGISPSPDHFACMVDLLSRSGHLGDAYELMKSMHE 269
IL+AC G + + + + +G ++D + G L D+ + K++
Sbjct: 210 SILSACGKEGDLLKVKEVHGFIVRNFGFDADAPIGNALIDNYGKCGSLKDSENIFKTVCY 269
Query: 270 PHAGAWGALLGACKLHG 286
+ W ++ +HG
Sbjct: 270 VNLVTWTTMISCYGMHG 286
>Medtr7g106930.1 | pentatricopeptide (PPR) repeat protein | HC |
chr7:43569310-43567382 | 20130731
Length = 526
Score = 212 bits (539), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 118/345 (34%), Positives = 200/345 (57%), Gaps = 42/345 (12%)
Query: 3 QRNVASWNAMLCGFVKDGDLSSARGVFDAMPEKNVVSFTTMIDGYAKAGDMAAARFLFEQ 62
QR++ LC DL +A+ +F M +V S+T MI GY K GD+ +AR LF++
Sbjct: 21 QRSLVCMYGCLC------DLMAAKCIFKMMGRFDVASWTCMIKGYFKCGDVDSARKLFDR 74
Query: 63 ATEKDVVAWSALISGYVQNGQPNQALKVFLEMESKNVKPDEFILVSLMSATSQLGHL-EL 121
K++V WS +I+GY++N ++A+++F + DE ++ + + A S HL L
Sbjct: 75 MPVKNLVTWSTMINGYLRNNCFDKAVEIF------EILIDEGLVANEVGAVSACAHLGAL 128
Query: 122 AQWVDSYVSKSSIDLQQDHVI-AALLDMNAKCGNMDRALKLFKEMPKRDLVSYCSMIQGL 180
A +Y I+L + ++ A++DM A+CGN+++A+++F+EM ++D++S+ S+I G+
Sbjct: 129 AAGEKAYEHAIRINLDLNVILGTAIVDMYARCGNVEKAVRVFEEMKEKDVISWTSLISGV 188
Query: 181 SIHGCGEDAVRLFNSMLMEGLVPDEVAFTIILTACSHSGLVDEGWNYFQSMKQKYGISPS 240
++HG E+A+ F M+ G+VP ++ FT +L A SH GLV++G F+SMK+ Y + P
Sbjct: 189 AMHGYAEEALEYFYVMVKNGIVPRDITFTAVLKAYSHGGLVEKGQEIFESMKRDYRLEPR 248
Query: 241 PDHFACMVDLLSRSGHLGDAYELMKSMH-EPHAGAWGALLGACKLHGDSDLGEIVANQLF 299
+H+ CMVDLL R+G L +A + M +P+A
Sbjct: 249 LEHYGCMVDLLGRAGKLEEAENFILEMPIKPNA--------------------------- 281
Query: 300 ELEPQNAANYILLSNIYAAAERWIDVSLVRSRMRERSVQKIPGCS 344
++P+++ Y LLSNIYA +W D +++R M+E+ V+K PG S
Sbjct: 282 PMKPEHSGYYALLSNIYARTNKWKDATVMRRLMKEKGVRKQPGYS 326
>Medtr4g031160.1 | pentatricopeptide (PPR) repeat protein | HC |
chr4:10600555-10597860 | 20130731
Length = 839
Score = 212 bits (539), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 112/304 (36%), Positives = 178/304 (58%), Gaps = 4/304 (1%)
Query: 43 MIDGYAKAGDMAAARFLFEQATEKDVVAWSALISGYVQNGQPNQALKVFLEMESKNVKPD 102
++ YAK+G M +AR F+ EK++V+ + + V++ N + E+E
Sbjct: 407 LVSVYAKSGRMESARKCFDVLFEKNLVSETVVDDTNVKDFNLNSEQDLDREVEYVGSGVS 466
Query: 103 EFILVSLMSATSQLGHLELAQWVDSYVSKSSIDLQQD-HVIAALLDMNAKCGNMDRALKL 161
F SL+S + +G + + + + V K I + D V AL+ M +KCGN + AL++
Sbjct: 467 SFTYASLLSGAACIGTIGKGEQIHAMVVK--IGFRTDLSVNNALISMYSKCGNKEAALQV 524
Query: 162 FKEMPKRDLVSYCSMIQGLSIHGCGEDAVRLFNSMLMEGLVPDEVAFTIILTACSHSGLV 221
F +M +++++ S+I G + HG A+ LF +ML G+ P++V + +L+ACSH GL+
Sbjct: 525 FNDMEDCNVITWTSIINGFAKHGFASKALELFYNMLETGVKPNDVTYIAVLSACSHVGLI 584
Query: 222 DEGWNYFQSMKQKYGISPSPDHFACMVDLLSRSGHLGDAYELMKSM-HEPHAGAWGALLG 280
DE W +F SM+ +GI P +H+ACMVDLL RSG L +A E + SM + A W LG
Sbjct: 585 DEAWKHFTSMRDNHGIVPRMEHYACMVDLLGRSGLLSEAIEFINSMPFDADALVWRTFLG 644
Query: 281 ACKLHGDSDLGEIVANQLFELEPQNAANYILLSNIYAAAERWIDVSLVRSRMRERSVQKI 340
+C++H ++ LGE A + E EP + A YILLSN+YA RW DV+ +R M+++ + K
Sbjct: 645 SCRVHRNTKLGEHAAKMILEREPHDPATYILLSNLYATEGRWEDVAAIRKNMKQKQITKE 704
Query: 341 PGCS 344
G S
Sbjct: 705 AGSS 708
Score = 98.6 bits (244), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 68/213 (31%), Positives = 118/213 (55%), Gaps = 16/213 (7%)
Query: 15 GFVKDG----DLSSARGVFDAMPEKNVVSFTTMIDGYAKA---GDMAAARFLFEQATEKD 67
GF K G G FD+ +V +ID + K D+ +AR +F++ EK+
Sbjct: 170 GFFKTGLCLFGFVLKTGYFDS----HVCVGCELIDMFVKGCSLADLESARKVFDKMREKN 225
Query: 68 VVAWSALISGYVQNGQPNQALKVFLEM-ESKNVKPDEFILVSLMSATSQLGHLELAQWVD 126
VV W+ +I+ Q G ++A+ +FLEM S PD F L L+S +++ L L + +
Sbjct: 226 VVTWTLMITRLAQYGYNDEAIDLFLEMLVSSGYVPDRFTLTGLISVCAEIQFLSLGKELH 285
Query: 127 SYVSKSSIDLQQDHVIAALLDMNAKCGNMDRALKLFKEMPKRDLVSYCSMIQGLSIHGCG 186
S+V +S + L V +L+DM AKCG + A K+F M + +++S+ +++ G G G
Sbjct: 286 SWVIRSGLVLDL-CVGCSLVDMYAKCGLVQEARKVFDGMREHNVMSWTALVNGYVRGGGG 344
Query: 187 --EDAVRLFNSMLME-GLVPDEVAFTIILTACS 216
+A+R+F++ML++ G+ P+ F+ +L AC+
Sbjct: 345 YEREAMRMFSNMLLQGGVAPNCFTFSGVLKACA 377
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 64/277 (23%), Positives = 125/277 (45%), Gaps = 14/277 (5%)
Query: 42 TMIDGYAKAGDMAAARFLFEQATEKDVVAWSALISGYVQ--NGQPNQALKVFLEMESK-N 98
+++D YAK G + AR +F+ E +V++W+AL++GYV+ G +A+++F M +
Sbjct: 302 SLVDMYAKCGLVQEARKVFDGMREHNVMSWTALVNGYVRGGGGYEREAMRMFSNMLLQGG 361
Query: 99 VKPDEFILVSLMSATSQLGHLELAQWVDSYVSK---SSIDLQQDHVIAALLDMNAKCGNM 155
V P+ F ++ A + L + + V K S+ID V L+ + AK G M
Sbjct: 362 VAPNCFTFSGVLKACASLPDFDFGEQVHGQTIKLGLSAIDC----VGNGLVSVYAKSGRM 417
Query: 156 DRALKLFKEMPKRDLVSYCSMIQGLSIHGCGEDAVR-LFNSMLMEGLVPDEVAFTIILTA 214
+ A K F + +++LVS +++ ++ ++ + L + G + +L+
Sbjct: 418 ESARKCFDVLFEKNLVSE-TVVDDTNVKDFNLNSEQDLDREVEYVGSGVSSFTYASLLSG 476
Query: 215 CSHSGLVDEGWNYFQSMKQKYGISPSPDHFACMVDLLSRSGHLGDAYELMKSMHEPHAGA 274
+ G + +G +M K G ++ + S+ G+ A ++ M + +
Sbjct: 477 AACIGTIGKG-EQIHAMVVKIGFRTDLSVNNALISMYSKCGNKEAALQVFNDMEDCNVIT 535
Query: 275 WGALLGACKLHG-DSDLGEIVANQLFELEPQNAANYI 310
W +++ HG S E+ N L N YI
Sbjct: 536 WTSIINGFAKHGFASKALELFYNMLETGVKPNDVTYI 572
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 40/156 (25%), Positives = 73/156 (46%), Gaps = 8/156 (5%)
Query: 141 VIAALLDMNAKCGNMDRALKLFKEM--PKRDLVSYCSMIQGLSIHGCGEDAVRLFNSMLM 198
++ +L+ + +K + A +F+ M KRD+VSY S+I + + AV +F+ +L+
Sbjct: 89 LLNSLITLYSKSNDPITAFSIFQSMENSKRDVVSYSSIISCFANNRNCLKAVEMFDQLLL 148
Query: 199 E-GLVPDEVAFTIILTACSHSGLVDEGWNYFQSMKQKYGISPSPDHFAC-MVDLLSRSGH 256
+ G+ P+E FT ++ AC G G F K G S C ++D+ +
Sbjct: 149 QDGVYPNEYCFTAVIRACLKGGFFKTGLCLF-GFVLKTGYFDSHVCVGCELIDMFVKGCS 207
Query: 257 LGD---AYELMKSMHEPHAGAWGALLGACKLHGDSD 289
L D A ++ M E + W ++ +G +D
Sbjct: 208 LADLESARKVFDKMREKNVVTWTLMITRLAQYGYND 243
>Medtr3g072900.1 | PPR containing plant-like protein | HC |
chr3:32815251-32818532 | 20130731
Length = 745
Score = 212 bits (539), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 112/302 (37%), Positives = 179/302 (59%), Gaps = 2/302 (0%)
Query: 34 EKNVVSFTTMIDGYAKAGDMAAARFLFEQATEKDVVAWSALISGYVQNGQPNQALKVFLE 93
E + V + +ID YAK G + A LFE+ +KDVVAWS+LI+G + G A +F++
Sbjct: 374 ELDCVVGSILIDIYAKQGSINNALRLFERLPDKDVVAWSSLITGCARFGSDKLAFSLFMD 433
Query: 94 MESKNVKPDEFILVSLMSATSQLGHLELAQWVDSYVSKSSIDLQQDHVIAALLDMNAKCG 153
M ++ D F++ ++ A S L + + V S K + + V AL+DM AKCG
Sbjct: 434 MIHLGLQIDHFVISIVLKACSSLASHQHGKQVHSLCLKKGYE-SEGVVTTALIDMYAKCG 492
Query: 154 NMDRALKLFKEMPKRDLVSYCSMIQGLSIHGCGEDAVRLFNSMLMEGLVPDEVAFTIILT 213
+++ AL LF + + D +S+ S+I G + +G E+A+ L + M+ G P+++ +LT
Sbjct: 493 DIEDALSLFGCLSEIDTMSWTSIIVGCAQNGRAEEAISLLHKMIESGTKPNKITILGVLT 552
Query: 214 ACSHSGLVDEGWNYFQSMKQKYGISPSPDHFACMVDLLSRSGHLGDAYELMKSM-HEPHA 272
AC HSGLV+E W+ F S++ +G+ P P+H+ CMVD+L ++G +A +L+ M +P
Sbjct: 553 ACRHSGLVEEAWDVFNSIETNHGLIPCPEHYNCMVDILGQAGRFEEAVKLISEMPFKPDK 612
Query: 273 GAWGALLGACKLHGDSDLGEIVANQLFELEPQNAANYILLSNIYAAAERWIDVSLVRSRM 332
W +LLGAC + + DL IVA L P++ + YI+LSN+YAA W VS VR +
Sbjct: 613 TIWSSLLGACGTYKNRDLANIVAEHLLATSPEDVSVYIMLSNVYAALGMWDSVSKVRETV 672
Query: 333 RE 334
++
Sbjct: 673 KK 674
Score = 115 bits (289), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 84/293 (28%), Positives = 145/293 (49%), Gaps = 20/293 (6%)
Query: 10 NAMLCGFVKDGDLSSARGVFDAMPEKNVVSFTTMIDGYAKAGDMAAARFLFEQATEKDVV 69
NA+L +VK G L A+ VF +P KN S+ T+I GYAK G + A LF++ E D+V
Sbjct: 144 NALLDMYVKCGSLRDAQRVFCEIPCKNATSWNTLILGYAKQGLIDDAMKLFDKMPEPDIV 203
Query: 70 AWSALISGYVQNGQPNQALKVFLEMESKNVKPDEFILVSLMSATSQLGHLELAQWVDSYV 129
+W+++I+G V N ++AL+ M K +K DEF S++ A L L + + Y+
Sbjct: 204 SWNSIIAGLVDNAS-SRALRFVSMMHGKGLKMDEFTFPSVLKACGCSDELMLGREIHCYI 262
Query: 130 SKSSIDLQQDHVIAALLDMNAKCGNMDRALKLFKEMPKRDLVS-----YCSMIQGLSIHG 184
KS + + I+AL+DM + C + A K+F + + VS + SM+ G ++G
Sbjct: 263 IKSGFE-SSCYCISALIDMYSSCKLLSEATKIFDQYFRNSSVSESLALWNSMLSGHVVNG 321
Query: 185 CGEDAVRLFNSMLMEGLVPDEVAFTIILTACSHSGLVDEGWNYFQSMKQKYG-ISPSPDH 243
+A+ + + M G+ D F+I+L C + ++ Q +G + S
Sbjct: 322 DYVEALSMISHMHRSGVRFDFYTFSIVLKICMN-------FDNLSLASQVHGFVITSGYE 374
Query: 244 FAC-----MVDLLSRSGHLGDAYELMKSMHEPHAGAWGALLGACKLHGDSDLG 291
C ++D+ ++ G + +A L + + + AW +L+ C G L
Sbjct: 375 LDCVVGSILIDIYAKQGSINNALRLFERLPDKDVVAWSSLITGCARFGSDKLA 427
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 78/295 (26%), Positives = 141/295 (47%), Gaps = 52/295 (17%)
Query: 36 NVVSFTTMIDGYAKAGDMAAARFLFEQATEKDVVAWSALISGYVQNGQPNQALKVFLEM- 94
++ MI Y+K + AR +F++ +++V+W+ ++S + P++AL ++ EM
Sbjct: 37 HIFILNNMISVYSKCSSIIDARNMFDEMPHRNIVSWTTMVSVLTNSSMPHEALSLYNEMI 96
Query: 95 ESKNVKPDEFILVSLMSATSQLGHLELAQWVDSYVSKSSIDLQQDHVIAALLDMNAKCGN 154
ESK +P++F+ +++ A + ++EL + V ++ ++ +D+ ++ ALLDM KCG+
Sbjct: 97 ESKIEQPNQFLYSAVLKACGLVRNVELGKMVHYHIFQAKLDVDIV-LMNALLDMYVKCGS 155
Query: 155 M-------------------------------DRALKLFKEMPKRDLVSYCSMIQGLSIH 183
+ D A+KLF +MP+ D+VS+ S+I GL +
Sbjct: 156 LRDAQRVFCEIPCKNATSWNTLILGYAKQGLIDDAMKLFDKMPEPDIVSWNSIIAGL-VD 214
Query: 184 GCGEDAVRLFNSMLMEGLVPDEVAFTIILTACS-----------HSGLVDEGWNYFQSMK 232
A+R + M +GL DE F +L AC H ++ G F+S
Sbjct: 215 NASSRALRFVSMMHGKGLKMDEFTFPSVLKACGCSDELMLGREIHCYIIKSG---FES-- 269
Query: 233 QKYGISPSPDHFACMVDLLSRSGHLGDAYELMKSMHEPHAGAWGALLGACKLHGD 287
Y IS D ++ LLS + + D Y S+ E A W ++L ++GD
Sbjct: 270 SCYCISALIDMYSS-CKLLSEATKIFDQYFRNSSVSESLA-LWNSMLSGHVVNGD 322
>Medtr0493s0010.1 | pentatricopeptide (PPR) repeat protein | HC |
scaffold0493:2001-4149 | 20130731
Length = 611
Score = 212 bits (539), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 117/339 (34%), Positives = 186/339 (54%), Gaps = 23/339 (6%)
Query: 16 FVKDGDLSSARGVFDAMPEKNVVSFTTMIDGYAKAG-------DMAAARFLFEQATEKDV 68
+ + G AR VFD M + NVV++ ++ + G +F + +D
Sbjct: 158 YAECGCYEYARKVFDEMSQPNVVAWNAVVTACFRCGMWRVLGVSFGWREVVFCEMKMRDD 217
Query: 69 VAWSALISGYVQNGQPNQALKVFLEMESKNVKPDEFILVSLMSATSQLGHLELAQWVDSY 128
+WS +I G+ ++G + A F E+ +P E L ++SA +Q G E + + +
Sbjct: 218 ASWSTMIVGFAKSGSFHDAFGFFKELLRDRNRPSEVSLTGVLSACAQAGAFEFGKILHGF 277
Query: 129 VSKSSIDLQQDHVIAALLDMNAKCGNMDRALKLFKEMPKRDLVSYCSMIQGLSIHGCGED 188
+ K+ L V AL+D +KCGN+D A +F L++HG ++
Sbjct: 278 MEKAGF-LCIVSVNNALIDTYSKCGNVDMAKLVFN--------------ISLAMHGRADE 322
Query: 189 AVRLFNSMLMEGLVPDEVAFTIILTACSHSGLVDEGWNYFQSMKQKYGISPSPDHFACMV 248
A+R+F+ M G+ PD V F +L ACSHSGLV++G F M+ YGI P+ +H+ CMV
Sbjct: 323 AIRVFHEMEESGVRPDGVTFISLLYACSHSGLVEQGCALFSKMRNFYGIEPAIEHYGCMV 382
Query: 249 DLLSRSGHLGDAYELMKSMH-EPHAGAWGALLGACKLHGDSDLGEIVANQLFELEPQNAA 307
DL R+ L AYE ++ M P+ W LLGAC +HG+ +L E+V +L E++P N+
Sbjct: 383 DLYGRAARLQKAYEFIRQMPILPNVIIWRTLLGACSIHGNIELAELVKARLAEMDPNNSG 442
Query: 308 NYILLSNIYAAAERWIDVSLVRSRMRERSVQKIPGCSKL 346
+++LLSN+YA A +W DV+ +R M E+S++KIPG S +
Sbjct: 443 DHVLLSNVYAVAGKWKDVAGIRRTMIEQSMKKIPGWSMI 481
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/211 (26%), Positives = 101/211 (47%), Gaps = 28/211 (13%)
Query: 1 MPQRNVASWNAMLCGFVKDGDLSSARGVF-DAMPEKNV---VSFTTMIDGYAKAGDMAAA 56
M R+ ASW+ M+ GF K G A G F + + ++N VS T ++ A+AG
Sbjct: 212 MKMRDDASWSTMIVGFAKSGSFHDAFGFFKELLRDRNRPSEVSLTGVLSACAQAGAFEFG 271
Query: 57 RFL---FEQATEKDVVAW-SALISGYVQ-----------------NGQPNQALKVFLEME 95
+ L E+A +V+ +ALI Y + +G+ ++A++VF EME
Sbjct: 272 KILHGFMEKAGFLCIVSVNNALIDTYSKCGNVDMAKLVFNISLAMHGRADEAIRVFHEME 331
Query: 96 SKNVKPDEFILVSLMSATSQLGHLELAQWVDSYVSK-SSIDLQQDHVIAALLDMNAKCGN 154
V+PD +SL+ A S G +E + S + I+ +H ++D+ +
Sbjct: 332 ESGVRPDGVTFISLLYACSHSGLVEQGCALFSKMRNFYGIEPAIEHY-GCMVDLYGRAAR 390
Query: 155 MDRALKLFKEMPK-RDLVSYCSMIQGLSIHG 184
+ +A + ++MP +++ + +++ SIHG
Sbjct: 391 LQKAYEFIRQMPILPNVIIWRTLLGACSIHG 421
>Medtr3g029530.1 | pentatricopeptide (PPR) repeat protein | HC |
chr3:9292413-9288471 | 20130731
Length = 1125
Score = 211 bits (538), Expect = 7e-55, Method: Compositional matrix adjust.
Identities = 121/385 (31%), Positives = 193/385 (50%), Gaps = 42/385 (10%)
Query: 1 MPQRNVASWNAMLCGFVKDGDLSSARGVFDAMPEKNVVSF-------------------- 40
MP+R+V +WNA++ G D D ++ F+ M + ++S
Sbjct: 611 MPERDVVTWNALIGGHADDKDPNATIQAFNLMRREGLLSNYITIVNLLGTCMSPDYLLKH 670
Query: 41 --------------------TTMIDGYAKAGDMAAARFLFEQATEKDVVAWSALISGYVQ 80
+++I YA+ GD+ + ++F+ K+ W+A+ S
Sbjct: 671 GMPIHAHIVVAGFELDTYVQSSLITMYAQCGDLNTSSYIFDVLANKNSSTWNAIFSANAH 730
Query: 81 NGQPNQALKVFLEMESKNVKPDEFILVSLMSATSQLGHLELAQWVDSYVSKSSIDLQQDH 140
G +ALK M + V D+F ++ L L+ Q + S++ K +L + +
Sbjct: 731 YGPGEEALKFIARMRNDGVDLDQFSFSVALATIGNLTVLDEGQQLHSWIIKLGFELDE-Y 789
Query: 141 VIAALLDMNAKCGNMDRALKLFKEMPKRDLVSYCSMIQGLSIHGCGEDAVRLFNSMLMEG 200
V+ A +DM KCG +D ++ R S+ +I L+ HG A F+ ML G
Sbjct: 790 VLNATMDMYGKCGEIDDVFRILPIPKIRSKRSWNILISALARHGFFRQATEAFHEMLDLG 849
Query: 201 LVPDEVAFTIILTACSHSGLVDEGWNYFQSMKQKYGISPSPDHFACMVDLLSRSGHLGDA 260
L PD V F +L+ACSH GLVDEG YF SM ++G+ + +H C++DLL RSG L +A
Sbjct: 850 LKPDHVTFVSLLSACSHGGLVDEGLVYFSSMTSEFGVPTAIEHCVCIIDLLGRSGRLAEA 909
Query: 261 YELMKSMH-EPHAGAWGALLGACKLHGDSDLGEIVANQLFELEPQNAANYILLSNIYAAA 319
+ M P+ W +LL ACK+HG+ +LG A++LFEL + + Y+L SN+ A+
Sbjct: 910 EGFIDKMPVPPNEFVWRSLLAACKVHGNLELGRKAADRLFELNSSDDSAYVLYSNVCAST 969
Query: 320 ERWIDVSLVRSRMRERSVQKIPGCS 344
+RW DV VR +M +S++K P CS
Sbjct: 970 QRWGDVENVRKQMESQSLKKKPACS 994
Score = 90.1 bits (222), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 70/323 (21%), Positives = 143/323 (44%), Gaps = 39/323 (12%)
Query: 1 MPQRNVASWNAMLCGFVKDGDLSSARGVFDAMPEK----NVVSFTT-------------- 42
MP R++ SWN+M+ V+DG S A + M + N V+FTT
Sbjct: 513 MPARDLISWNSMMASHVEDGKYSHAILLLVEMLKTRKAMNYVTFTTALSACYNLEKLKIV 572
Query: 43 ------------------MIDGYAKAGDMAAARFLFEQATEKDVVAWSALISGYVQNGQP 84
++ Y K G M A+ + + E+DVV W+ALI G+ + P
Sbjct: 573 HAFVIHFAVHHNLIIGNTLVTMYGKFGLMDEAQKVCKIMPERDVVTWNALIGGHADDKDP 632
Query: 85 NQALKVFLEMESKNVKPDEFILVSLMSATSQLGH-LELAQWVDSYVSKSSIDLQQDHVIA 143
N ++ F M + + + +V+L+ + L+ + +++ + +L +V +
Sbjct: 633 NATIQAFNLMRREGLLSNYITIVNLLGTCMSPDYLLKHGMPIHAHIVVAGFELDT-YVQS 691
Query: 144 ALLDMNAKCGNMDRALKLFKEMPKRDLVSYCSMIQGLSIHGCGEDAVRLFNSMLMEGLVP 203
+L+ M A+CG+++ + +F + ++ ++ ++ + +G GE+A++ M +G+
Sbjct: 692 SLITMYAQCGDLNTSSYIFDVLANKNSSTWNAIFSANAHYGPGEEALKFIARMRNDGVDL 751
Query: 204 DEVAFTIILTACSHSGLVDEGWNYFQSMKQKYGISPSPDHFACMVDLLSRSGHLGDAYEL 263
D+ +F++ L + ++DEG S K G +D+ + G + D + +
Sbjct: 752 DQFSFSVALATIGNLTVLDEG-QQLHSWIIKLGFELDEYVLNATMDMYGKCGEIDDVFRI 810
Query: 264 MKSMHEPHAGAWGALLGACKLHG 286
+ +W L+ A HG
Sbjct: 811 LPIPKIRSKRSWNILISALARHG 833
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 59/287 (20%), Positives = 138/287 (48%), Gaps = 6/287 (2%)
Query: 34 EKNVVSFTTMIDGYAKAGDMAAARFLFEQATEKDVVAWSALISGYVQNGQPNQALKVFLE 93
++N T+++ Y+K G + A+ +F++ +++ +W+ +ISG+V+ G ++A++ F
Sbjct: 179 QQNTFYTNTLVNMYSKFGSIKYAQHVFDKMYDRNDASWNNMISGFVRVGWYHKAMQFFCH 238
Query: 94 MESKNVKPDEFILVSLMSATSQLGHL-ELAQWVDSYVSKSSIDLQQDHVIAALLDMNAKC 152
M V P +++ S+++A + G + E A+ + YV K + + V +LL
Sbjct: 239 MFENGVTPSSYVIASMVTACDRSGCMTEGARQIHGYVVKCGL-MSNVFVGTSLLHFYGTH 297
Query: 153 GNMDRALKLFKEMPKRDLVSYCSMIQGLSIHGCGEDAVRLFNSMLMEGLVPDEVAFTIIL 212
G++ A KLF+E+ + ++VS+ S++ + +G ++ + ++ + GL+ ++
Sbjct: 298 GSVSEANKLFEEIEEPNIVSWTSLMVCYADNGHTKEVLNIYRHLRHNGLICTGNTMATVI 357
Query: 213 TACSHSGLVDEGWNYFQSMKQKYGISPSPDHFA-CMVDLLSRSGHLGDAYELMKSMHEPH 271
C G G+ + K G+ S A ++ + + +A + +M E
Sbjct: 358 RTCGMFGDKTMGYQILGDVI-KSGLDTSSVSVANSLISMFGNYDSVEEASRVFNNMQERD 416
Query: 272 AGAWGALLGACKLHGDSDLGEIVANQLFELEPQNAANYILLSNIYAA 318
+W +++ A +G + E + + + +YI +S + A
Sbjct: 417 TISWNSIITASAHNGRFE--ESLGHFFWMRRTHPKTDYITISALLPA 461
Score = 75.5 bits (184), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 71/358 (19%), Positives = 143/358 (39%), Gaps = 43/358 (12%)
Query: 1 MPQRNVASWNAMLCGFVKDGDLSSARGVFDAMPEK------------------------- 35
M RN ASWN M+ GFV+ G A F M E
Sbjct: 208 MYDRNDASWNNMISGFVRVGWYHKAMQFFCHMFENGVTPSSYVIASMVTACDRSGCMTEG 267
Query: 36 ---------------NVVSFTTMIDGYAKAGDMAAARFLFEQATEKDVVAWSALISGYVQ 80
NV T+++ Y G ++ A LFE+ E ++V+W++L+ Y
Sbjct: 268 ARQIHGYVVKCGLMSNVFVGTSLLHFYGTHGSVSEANKLFEEIEEPNIVSWTSLMVCYAD 327
Query: 81 NGQPNQALKVFLEMESKNVKPDEFILVSLMSATSQLGHLELAQWVDSYVSKSSIDLQQDH 140
NG + L ++ + + + +++ G + + V KS +D
Sbjct: 328 NGHTKEVLNIYRHLRHNGLICTGNTMATVIRTCGMFGDKTMGYQILGDVIKSGLDTSSVS 387
Query: 141 VIAALLDMNAKCGNMDRALKLFKEMPKRDLVSYCSMIQGLSIHGCGEDAVRLFNSMLMEG 200
V +L+ M +++ A ++F M +RD +S+ S+I + +G E+++ F M
Sbjct: 388 VANSLISMFGNYDSVEEASRVFNNMQERDTISWNSIITASAHNGRFEESLGHFFWMRRTH 447
Query: 201 LVPDEVAFTIILTACSHSGLVDEGWNYFQSMKQKYGISPSPDHFACMVDLLSRSGHLGDA 260
D + + +L AC + + G + K G+ + ++ + +++G DA
Sbjct: 448 PKTDYITISALLPACGSAQHLKWGRG-LHGLITKSGLESNVCVCNSLLSMYAQAGSSEDA 506
Query: 261 YELMKSMHEPHAGAWGALLGACKLHGDSDLGEIVANQLFELEPQNAANYILLSNIYAA 318
+ +M +W +++ + G ++ ++ L+ + A NY+ + +A
Sbjct: 507 ELVFHTMPARDLISWNSMMASHVEDGKYSHAILLLVEM--LKTRKAMNYVTFTTALSA 562
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 50/183 (27%), Positives = 98/183 (53%), Gaps = 6/183 (3%)
Query: 34 EKNVVSFTTMIDGYAKAGDMAAARFLFEQATEKDVVAWSALISGYVQNGQPNQALKVFLE 93
E NV +++ YA+AG A +F +D+++W+++++ +V++G+ + A+ + +E
Sbjct: 484 ESNVCVCNSLLSMYAQAGSSEDAELVFHTMPARDLISWNSMMASHVEDGKYSHAILLLVE 543
Query: 94 MESKNVKPDEFILVSLMSATSQLGHLELAQWVDSYVSKSSIDLQQDHVIA-ALLDMNAKC 152
M K K + V+ +A S +LE + V ++V ++ + +I L+ M K
Sbjct: 544 M-LKTRKAMNY--VTFTTALSACYNLEKLKIVHAFVIHFAV--HHNLIIGNTLVTMYGKF 598
Query: 153 GNMDRALKLFKEMPKRDLVSYCSMIQGLSIHGCGEDAVRLFNSMLMEGLVPDEVAFTIIL 212
G MD A K+ K MP+RD+V++ ++I G + ++ FN M EGL+ + + +L
Sbjct: 599 GLMDEAQKVCKIMPERDVVTWNALIGGHADDKDPNATIQAFNLMRREGLLSNYITIVNLL 658
Query: 213 TAC 215
C
Sbjct: 659 GTC 661
>Medtr7g011030.1 | pentatricopeptide (PPR) repeat protein | HC |
chr7:2861060-2858958 | 20130731
Length = 700
Score = 211 bits (536), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 104/307 (33%), Positives = 181/307 (58%), Gaps = 6/307 (1%)
Query: 41 TTMIDGYAKAGDMAAARFLFEQATEKDVVAWSALISGYVQNGQPNQALKVFLEMESKNVK 100
+ ++D + K GD+ +AR +F+ ++VV W++L++ Y+QNG+ + L + M+ +
Sbjct: 266 SMLVDMFGKCGDVLSARKVFDGLQNRNVVVWTSLMTAYLQNGEFEETLNLLSCMDREGTM 325
Query: 101 PDEFILVSLMSATSQLGHLELAQWVDSYVSKSSIDLQQDHVIA--ALLDMNAKCGNMDRA 158
+EF L++A + + L + + V K I ++ VI AL++M +KCG +D +
Sbjct: 326 SNEFTFAVLLNAFAGMAALRHGDLLHARVEKLGI---KNRVIVGNALINMYSKCGCIDSS 382
Query: 159 LKLFKEMPKRDLVSYCSMIQGLSIHGCGEDAVRLFNSMLMEGLVPDEVAFTIILTACSHS 218
+F +M RD++++ +MI G S HG G+ A+ LF ML G P+ V F +L+AC+H
Sbjct: 383 YDVFFDMRNRDIITWNAMICGYSQHGLGKQALLLFQDMLSAGECPNHVTFVGVLSACAHL 442
Query: 219 GLVDEGWNYFQSMKQKYGISPSPDHFACMVDLLSRSGHLGDAYELMKSMHEP-HAGAWGA 277
LV+EG+ Y + + + + P +H+ C+V +L R+G L +A M++ AW
Sbjct: 443 ALVNEGFYYLNQLMKHFKVEPGLEHYTCVVAVLCRAGMLEEAENFMRTTQVKWDVVAWRV 502
Query: 278 LLGACKLHGDSDLGEIVANQLFELEPQNAANYILLSNIYAAAERWIDVSLVRSRMRERSV 337
LL AC +H + +LG +A + +++P++ Y LLSN+YA A W V+++R MRER+V
Sbjct: 503 LLNACNIHRNYNLGTKIAETILQMDPRDMGTYTLLSNMYAKARSWDSVTMIRKMMRERNV 562
Query: 338 QKIPGCS 344
+K PG S
Sbjct: 563 KKEPGVS 569
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 61/261 (23%), Positives = 127/261 (48%), Gaps = 11/261 (4%)
Query: 34 EKNVVSFTTMIDGYAKAGDMAAARFLFEQATEKDVVAWSALISGYVQNGQPNQALKVFLE 93
E N++ ++I+ Y K + AR+LF++ + + VV+++ L+ GY+ +G+ + +K+F
Sbjct: 52 EFNIIQLNSLINLYVKCSKLRLARYLFDEMSLRSVVSYNVLMGGYLHSGEHLEVVKLFKN 111
Query: 94 MESKNVKPDEFILVSLMSATSQLGHLELAQWVDSYVSKSSIDLQQDHVIAALLDMNAKCG 153
M S +P+E++ +++SA + G + ++ K + V ++L+ M +KC
Sbjct: 112 MVSSLYQPNEYVFTTVLSACAHSGRVFEGMQCHGFLFKFGLVFHH-FVKSSLVHMYSKCF 170
Query: 154 NMDRALKLFKEM-----PKRDLVSYCSMIQGLSIHGCGEDAVRLFNSMLMEGLVPDEVAF 208
++D AL++ + D Y S++ L G +AV + M+ EG+V D V +
Sbjct: 171 HVDLALQVLESEHGNIDNDNDAFCYNSVLNALVESGRLGEAVEVLGRMVDEGVVWDSVTY 230
Query: 209 TIILTACSHSGLVDEGWNYFQSMKQKYGISPSPDHF--ACMVDLLSRSGHLGDAYELMKS 266
++ C + D G Q Q + D F + +VD+ + G + A ++
Sbjct: 231 VSVMGLCGQ--IRDLGLG-LQVHAQLLKGGLTFDVFVGSMLVDMFGKCGDVLSARKVFDG 287
Query: 267 MHEPHAGAWGALLGACKLHGD 287
+ + W +L+ A +G+
Sbjct: 288 LQNRNVVVWTSLMTAYLQNGE 308
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 46/174 (26%), Positives = 85/174 (48%), Gaps = 14/174 (8%)
Query: 17 VKDGDLSSARGVFDAMPEKN-VVSFTTMIDGYAKAGDMAAARFLFEQATEKDVVAWSALI 75
++ GDL AR + + KN V+ +I+ Y+K G + ++ +F +D++ W+A+I
Sbjct: 344 LRHGDLLHAR--VEKLGIKNRVIVGNALINMYSKCGCIDSSYDVFFDMRNRDIITWNAMI 401
Query: 76 SGYVQNGQPNQALKVFLEMESKNVKPDEFILVSLMSATSQL-----GHLELAQWVDSYVS 130
GY Q+G QAL +F +M S P+ V ++SA + L G L Q + +
Sbjct: 402 CGYSQHGLGKQALLLFQDMLSAGECPNHVTFVGVLSACAHLALVNEGFYYLNQLMKHF-- 459
Query: 131 KSSIDLQQDHVIAALLDMNAKCGNMDRALKLFKEMP-KRDLVSYCSMIQGLSIH 183
K L+ + A+L + G ++ A + K D+V++ ++ +IH
Sbjct: 460 KVEPGLEHYTCVVAVL---CRAGMLEEAENFMRTTQVKWDVVAWRVLLNACNIH 510
>Medtr4g094692.1 | pentatricopeptide (PPR) repeat protein | HC |
chr4:38735797-38738097 | 20130731
Length = 766
Score = 209 bits (533), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 113/331 (34%), Positives = 185/331 (55%), Gaps = 12/331 (3%)
Query: 22 LSSARGV-----FDAMPEKNVVSFTTMIDGYAKAGDMAAARFLFEQATEKDVVAWSALIS 76
L A GV FDAM + + D Y K + A +F + +KD+V+W+ +++
Sbjct: 392 LKEAHGVALKCGFDAM---EISVLNALADAYVKCESLEAGEKVFYKMEKKDIVSWTTMVT 448
Query: 77 GYVQNGQPNQALKVFLEMESKNVKPDEFILVSLMSATSQLGHLELAQWVDSYVSKSSIDL 136
Y Q + +AL +F +M ++ P+ F S+++A L LE Q + + K+S+D
Sbjct: 449 AYCQCSEWGKALAIFSQMCNEGFAPNHFTFSSVITACGGLCLLEYGQQIHGLICKASLD- 507
Query: 137 QQDHVIAALLDMNAKCGNMDRALKLFKEMPKRDLVSYCSMIQGLSIHGCGEDAVRLFNSM 196
+ + +AL+DM +KCGN+ A +F+ + D V++ ++I + HG EDA++LF M
Sbjct: 508 AESCIESALIDMYSKCGNLTEAKNIFERISNPDTVTWTAIISTYAQHGLVEDALQLFRKM 567
Query: 197 LMEGLVPDEVAFTIILTACSHSGLVDEGWNYFQSMKQKYGISPSPDHFACMVDLLSRSGH 256
+ + V IL ACSH G+V++G F M+ YG+ P +H+AC+VDLL R G
Sbjct: 568 EQSAVKANAVTLLCILFACSHGGMVEDGLEIFNQMEGTYGVVPEMEHYACVVDLLGRVGR 627
Query: 257 LGDAYELMKSMH-EPHAGAWGALLGACKLHGDSDLGEIVANQLF--ELEPQNAANYILLS 313
L +A + M EP W LLGAC++HG+++LGE A ++ + EP++++ Y+LLS
Sbjct: 628 LDEAVAFIDKMPIEPDEMVWQTLLGACRIHGNAELGETAAQKILSTQPEPEHSSTYVLLS 687
Query: 314 NIYAAAERWIDVSLVRSRMRERSVQKIPGCS 344
N Y + D +R M+ER ++K PG S
Sbjct: 688 NTYIESGLLEDGIGLRDVMKERGIRKEPGYS 718
Score = 110 bits (274), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 87/335 (25%), Positives = 146/335 (43%), Gaps = 58/335 (17%)
Query: 1 MPQRNVASWNAMLCGFVKDGDLSSARGVFDAMPEK----NVVSF---------------- 40
M N SWNAM+ GF +G A M E N +F
Sbjct: 230 MTDVNDVSWNAMISGFTSNGLYLQAFDFLINMIENGVSPNKTTFLCISKAVGLLGDINRC 289
Query: 41 -------------------TTMIDGYAKAGDMAAARFLFEQATEKDVV--AWSALISGYV 79
T +I+ Y+K G + AR LF+ +V W+A+I+GY
Sbjct: 290 HEVHRYAYEWGLDSNTSVGTALINMYSKCGVLCDARVLFDSKFANCLVNAPWNAMITGYS 349
Query: 80 QNGQPNQALKVFLEMESKNVKPDEFILVSLMSATSQLGHLELAQWVDSYVSKSSIDLQQD 139
Q G +AL++F M +VKPD + + ++ + L L+ + K D +
Sbjct: 350 QAGCHLEALEMFTRMCQNDVKPDLYTFCCVFNSIAGLKCLKSLKEAHGVALKCGFDAMEI 409
Query: 140 HVIAALLDMNAKCGNMDRALKLFKEMPKRDLVSYCSMIQGLSIHGCGE--DAVRLFNSML 197
V+ AL D KC +++ K+F +M K+D+VS+ +M+ C E A+ +F+ M
Sbjct: 410 SVLNALADAYVKCESLEAGEKVFYKMEKKDIVSWTTMVTAYC--QCSEWGKALAIFSQMC 467
Query: 198 MEGLVPDEVAFTIILTACSHSGLVDEGWNYFQSMKQKYGI--SPSPDHFAC----MVDLL 251
EG P+ F+ ++TAC L++ G +Q +G+ S D +C ++D+
Sbjct: 468 NEGFAPNHFTFSSVITACGGLCLLEYG-------QQIHGLICKASLDAESCIESALIDMY 520
Query: 252 SRSGHLGDAYELMKSMHEPHAGAWGALLGACKLHG 286
S+ G+L +A + + + P W A++ HG
Sbjct: 521 SKCGNLTEAKNIFERISNPDTVTWTAIISTYAQHG 555
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 78/308 (25%), Positives = 125/308 (40%), Gaps = 52/308 (16%)
Query: 1 MPQRNVASWNAMLC--------------------------GFVKDGDLSSARG----VFD 30
M +RNV SW M+ GF L S G VF
Sbjct: 129 MSERNVFSWTVMIVASNEHGYYRYALELFCMMLEQGLLLDGFAFSAVLQSCVGLDSVVFG 188
Query: 31 AMPEKNVVSF---------TTMIDGYAKAGDMAAARFLFEQATEKDVVAWSALISGYVQN 81
M VV T++++ YAK G + +F T+ + V+W+A+ISG+ N
Sbjct: 189 EMVHAQVVVRGFLMHAVVGTSLLNLYAKLGMCECSVNVFNNMTDVNDVSWNAMISGFTSN 248
Query: 82 GQPNQALKVFLEMESKNVKPDEFILVSLMSATSQLGHLELAQWVDSYVSKSSIDLQQDHV 141
G QA + M V P++ + + A LG + V Y + +D V
Sbjct: 249 GLYLQAFDFLINMIENGVSPNKTTFLCISKAVGLLGDINRCHEVHRYAYEWGLD-SNTSV 307
Query: 142 IAALLDMNAKCGNMDRALKLFKEMPKRDLVS--YCSMIQGLSIHGCGEDAVRLFNSMLME 199
AL++M +KCG + A LF LV+ + +MI G S GC +A+ +F M
Sbjct: 308 GTALINMYSKCGVLCDARVLFDSKFANCLVNAPWNAMITGYSQAGCHLEALEMFTRMCQN 367
Query: 200 GLVPDEVAFTIILTACSHSGLVDEGWNYFQSMKQKYGISPSPDHFACMVDLLSRSGHLGD 259
+ PD F + + + G +S+K+ +G++ A + +L+ L D
Sbjct: 368 DVKPDLYTFCCVFNSIA-------GLKCLKSLKEAHGVALKCGFDAMEISVLNA---LAD 417
Query: 260 AYELMKSM 267
AY +S+
Sbjct: 418 AYVKCESL 425
Score = 68.9 bits (167), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 53/231 (22%), Positives = 108/231 (46%), Gaps = 2/231 (0%)
Query: 36 NVVSFTTMIDGYAKAGDMAAARFLFEQATEKDVVAWSALISGYVQNGQPNQALKVFLEME 95
N+V ++ Y+K D +AR +F+ +E++V +W+ +I ++G AL++F M
Sbjct: 102 NLVFLNHVVHAYSKCKDYDSARKVFDGMSERNVFSWTVMIVASNEHGYYRYALELFCMML 161
Query: 96 SKNVKPDEFILVSLMSATSQLGHLELAQWVDSYVSKSSIDLQQDHVIAALLDMNAKCGNM 155
+ + D F +++ + L + + V + V L V +LL++ AK G
Sbjct: 162 EQGLLLDGFAFSAVLQSCVGLDSVVFGEMVHAQVVVRGF-LMHAVVGTSLLNLYAKLGMC 220
Query: 156 DRALKLFKEMPKRDLVSYCSMIQGLSIHGCGEDAVRLFNSMLMEGLVPDEVAFTIILTAC 215
+ ++ +F M + VS+ +MI G + +G A +M+ G+ P++ F I A
Sbjct: 221 ECSVNVFNNMTDVNDVSWNAMISGFTSNGLYLQAFDFLINMIENGVSPNKTTFLCISKAV 280
Query: 216 SHSGLVDEGWNYFQSMKQKYGISPSPDHFACMVDLLSRSGHLGDAYELMKS 266
G ++ + ++G+ + ++++ S+ G L DA L S
Sbjct: 281 GLLGDINR-CHEVHRYAYEWGLDSNTSVGTALINMYSKCGVLCDARVLFDS 330
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 39/126 (30%), Positives = 66/126 (52%), Gaps = 9/126 (7%)
Query: 95 ESKNVKPDEFILVSLMSATSQLGHLELAQWVDSYVSKSSIDLQQD-----HVIAALLDMN 149
E++ +P+ L+ L+ + Q G L+ A + +V KS + + HV+ A
Sbjct: 58 ETQQKQPNIQPLIDLLKSCEQNGSLKQANCIHGHVLKSGFGDRDNLVFLNHVVHAY---- 113
Query: 150 AKCGNMDRALKLFKEMPKRDLVSYCSMIQGLSIHGCGEDAVRLFNSMLMEGLVPDEVAFT 209
+KC + D A K+F M +R++ S+ MI + HG A+ LF ML +GL+ D AF+
Sbjct: 114 SKCKDYDSARKVFDGMSERNVFSWTVMIVASNEHGYYRYALELFCMMLEQGLLLDGFAFS 173
Query: 210 IILTAC 215
+L +C
Sbjct: 174 AVLQSC 179
>Medtr5g025580.1 | PPR containing plant-like protein | HC |
chr5:10385696-10382561 | 20130731
Length = 767
Score = 209 bits (532), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 108/305 (35%), Positives = 181/305 (59%), Gaps = 6/305 (1%)
Query: 41 TTMIDGYAKAGDMAAARFLFEQATEKDVVAWSALISGYVQNGQPNQALKVFLEMESKNVK 100
++I Y + D+ +AR +F+ + ++ W+ +IS N + +AL++F ++ K
Sbjct: 461 NSLITMYDRCRDINSARKVFKFHSISNLCTWNCMISALSHNKESREALELFRHLQ---FK 517
Query: 101 PDEFILVSLMSATSQLGHLELAQWVDSYVSKSSIDLQQDHVIAALLDMNAKCGNMDRALK 160
P+EF +VS++SA +++G L + V Y + Q + AAL+D+ + CG +D A+K
Sbjct: 518 PNEFTIVSVLSACTRIGVLIHGKQVHGYTFRYGYQ-QNSFISAALVDLYSTCGRLDNAVK 576
Query: 161 LFKEMPKRDLVSYCSMIQGLSIHGCGEDAVRLFNSMLMEGLVPDEVAFTIILTACSHSGL 220
+F+ K + ++ SMI HG GE A+ LF+ M G+ + F +L+ACSHSGL
Sbjct: 577 VFRHSQKSE-SAWNSMIAAYGNHGNGEKAIELFHEMCDLGIKVTKSTFVSLLSACSHSGL 635
Query: 221 VDEGWNYFQSMKQKYGISPSPDHFACMVDLLSRSGHLGDAYELMKSMH-EPHAGAWGALL 279
V++G Y++ M +KYGI P +H +V++L+RSG + +AY+ K + +G WG LL
Sbjct: 636 VNQGLQYYECMLEKYGIKPEAEHQVYVVNMLARSGRIDEAYQFTKGLQSNASSGVWGMLL 695
Query: 280 GACKLHGDSDLGEIVANQLFELEPQNAANYILLSNIYAAAERWIDVSLVRSRMRERSVQK 339
C HG+ +LG+ VA +LFE+EPQN YI L+N+Y AA W D + +R + ++ ++K
Sbjct: 696 SVCNYHGELELGKKVAEKLFEMEPQNVGYYISLANMYVAAGSWKDATDLRQYIHDQGLRK 755
Query: 340 IPGCS 344
G S
Sbjct: 756 CAGYS 760
Score = 82.0 bits (201), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 65/244 (26%), Positives = 116/244 (47%), Gaps = 10/244 (4%)
Query: 43 MIDGYAKAGDMAAA--RFLFEQATEKDVVAWSALISGYVQNGQPNQALKVFLEMESKNVK 100
+I+ YAK GD+ ++ LFE+ KDVV+W++++ G + NG ++L F M +
Sbjct: 51 LINMYAKCGDVNSSDSECLFEEMEYKDVVSWNSIMRGCLYNGDLEKSLCYFRRMNFSEER 110
Query: 101 PDEFILVSLMSATSQLGHLELAQWVDSY-VSKSSIDLQQDHVIAALLDMNAKCGNMDRAL 159
D L +SA S LG L + + + D V +L+ + ++C +D A
Sbjct: 111 ADHVSLSCAISACSSLGELAFGECIHGQGIKLGYKDNSFVSVANSLISLYSQCEAVDVAE 170
Query: 160 KLFKEMPKRDLVSYCSMIQGLSIHGCGEDAVRLFNSMLMEGLV-PDEVAFTIILTACSHS 218
+F+EM +D+VS+ +M++G + + +A L M G PD V T +L C+
Sbjct: 171 TVFREMAYKDIVSWNAMMEGYASNENIHEAFDLMVEMQTTGCFQPDIVTLTTMLPLCAEL 230
Query: 219 GLVDEGWNYFQSMKQKYGISPSPDHFAC---MVDLLSRSGHLGDAYELMKSMHEPHAGAW 275
L EG +++ + PDH ++D+ S+ + A L S + +W
Sbjct: 231 MLYREGRTIHGYAIRRHMV---PDHLPLRNGLIDMYSKCNVVEKAELLFHSTAQIDLVSW 287
Query: 276 GALL 279
A++
Sbjct: 288 NAMI 291
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 60/266 (22%), Positives = 113/266 (42%), Gaps = 42/266 (15%)
Query: 1 MPQRNVASWNAMLCGFVKDGDLSSARGVFDAM----PEKNVVSFTTMIDGYAKAGDMA-- 54
M ++V SWN+++ G + +GDL + F M + VS + I + G++A
Sbjct: 73 MEYKDVVSWNSIMRGCLYNGDLEKSLCYFRRMNFSEERADHVSLSCAISACSSLGELAFG 132
Query: 55 -----------------------------------AARFLFEQATEKDVVAWSALISGYV 79
A +F + KD+V+W+A++ GY
Sbjct: 133 ECIHGQGIKLGYKDNSFVSVANSLISLYSQCEAVDVAETVFREMAYKDIVSWNAMMEGYA 192
Query: 80 QNGQPNQALKVFLEMESKNV-KPDEFILVSLMSATSQLGHLELAQWVDSYVSKSSIDLQQ 138
N ++A + +EM++ +PD L +++ ++L + + Y + +
Sbjct: 193 SNENIHEAFDLMVEMQTTGCFQPDIVTLTTMLPLCAELMLYREGRTIHGYAIRRHMVPDH 252
Query: 139 DHVIAALLDMNAKCGNMDRALKLFKEMPKRDLVSYCSMIQGLSIHGCGEDAVRLFNSMLM 198
+ L+DM +KC +++A LF + DLVS+ +MI G S + E A LF +L
Sbjct: 253 LPLRNGLIDMYSKCNVVEKAELLFHSTAQIDLVSWNAMISGYSQNKYYEKAQNLFKELLC 312
Query: 199 EGLVPDEVAFTIILTACSHSGLVDEG 224
G IL++C+ + ++ G
Sbjct: 313 CGQNCSSSTVFAILSSCNSANSLNFG 338
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 67/330 (20%), Positives = 133/330 (40%), Gaps = 57/330 (17%)
Query: 1 MPQRNVASWNAMLCGFVKDGDLSSARGVFDAMPE--------KNVVSFTTM--------- 43
M +++ SWNAM+ G+ + ++ A FD M E ++V+ TTM
Sbjct: 176 MAYKDIVSWNAMMEGYASNENIHEA---FDLMVEMQTTGCFQPDIVTLTTMLPLCAELML 232
Query: 44 ---------------------------IDGYAKAGDMAAARFLFEQATEKDVVAWSALIS 76
ID Y+K + A LF + D+V+W+A+IS
Sbjct: 233 YREGRTIHGYAIRRHMVPDHLPLRNGLIDMYSKCNVVEKAELLFHSTAQIDLVSWNAMIS 292
Query: 77 GYVQNGQPNQALKVFLEMESKNVKPDEFILVSLMSATSQLGHLELAQWVDSYVSKSSIDL 136
GY QN +A +F E+ + +++S+ + L + V + KS L
Sbjct: 293 GYSQNKYYEKAQNLFKELLCCGQNCSSSTVFAILSSCNSANSLNFGKSVHIWQLKSGF-L 351
Query: 137 QQDHVIAALLDMNAKCGNMDRALKLFKEMPK-RDLVSYCSMIQGLSIHGCGEDAVRLFNS 195
++ +L+ M G++ + +E D+ S+ ++I G ++A+ F
Sbjct: 352 NHTLLVNSLMQMYINSGDLTSGFSILQENSSIADIASWNTIIVGCVRGDQFQEALETF-- 409
Query: 196 MLME---GLVPDEVAFTIILTACSHSGLVDEGWNYFQ-SMKQKYGISPSPDHFACMVDLL 251
MLM D + +L+A ++ L+++G + ++K +G + ++ +
Sbjct: 410 MLMRQGPSFNYDSITLVNVLSAVANIELLNQGKSLHSLALKSPFGSDTRVQN--SLITMY 467
Query: 252 SRSGHLGDAYELMKSMHEPHAGAWGALLGA 281
R + A ++ K + W ++ A
Sbjct: 468 DRCRDINSARKVFKFHSISNLCTWNCMISA 497
>Medtr4g078750.1 | PPR containing plant-like protein | HC |
chr4:30434764-30433246 | 20130731
Length = 470
Score = 209 bits (532), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 110/345 (31%), Positives = 198/345 (57%), Gaps = 12/345 (3%)
Query: 10 NAMLCGFVKDGDLSSARGVFDAMPEKNVVSFTTMIDGYAKAGDMAAARFLFEQATEKDVV 69
+L + + + A+ VF+ +P +V+ MI+ + G+M A +FE +DVV
Sbjct: 123 TTLLVVYARTNHIVCAQKVFEEVPMFCIVASNAMINAFTMNGNMEGALLVFEWMPYRDVV 182
Query: 70 AWSALISGYVQNGQPNQALKVFLEMESKN------VKPDEFILVSLMSATSQL---GHLE 120
+W+ +++G+ +G A++ F M VKP+E VS++S+ ++L G L+
Sbjct: 183 SWTTMVNGFALSGNFGAAIRFFGTMMRHKDVLDCLVKPNEATYVSVLSSCTELEGKGALD 242
Query: 121 LAQWVDSYVSKSSIDLQQDHVIAALLDMNAKCGNMDRALKLFKEMPKRDLVSYCSMIQGL 180
+ V Y+ +DL V +L+++ K G ++ + +F+ M R++ ++ +MI L
Sbjct: 243 FGRQVHGYIVVKGVDLGV-FVGTSLINLYGKMGCLNYSASVFRVMVVREVCTWNAMISSL 301
Query: 181 SIHGCGEDAVRLFNSMLMEGLVPDEVAFTIILTACSHSGLVDEGWNYFQSMKQKYGISPS 240
+ +G ++A+ LF M ++GL P+ + F +LTAC+ G V EG F+SM K+ + P
Sbjct: 302 ASNGREKEALDLFEKMKLQGLKPNSITFVAVLTACARGGFVSEGLELFESMSSKFQVVPV 361
Query: 241 PDHFACMVDLLSRSGHLGDAYELMKSM-HEPHAGAWGALLGACKLHGDSDLGEIVANQLF 299
+H+ C+VDLL R+GH+ +A E++++M P GA LGAC++HG +LGE +A ++
Sbjct: 362 MEHYGCVVDLLGRAGHIQEAAEIIRNMPFPPDKTVLGAFLGACRIHGAIELGEEIA-KML 420
Query: 300 ELEPQNAANYILLSNIYAAAERWIDVSLVRSRMRERSVQKIPGCS 344
+L+ Q+ Y+LLS++YA ERW + +R+ + E + KIP S
Sbjct: 421 KLQTQHCGQYLLLSSMYAEKERWNHAADLRNEIMEAGIHKIPAFS 465
>Medtr5g044260.1 | PPR containing plant-like protein | HC |
chr5:19452918-19451090 | 20130731
Length = 565
Score = 209 bits (531), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 117/311 (37%), Positives = 188/311 (60%), Gaps = 8/311 (2%)
Query: 41 TTMIDGYAKAGDMAAARFLFEQATE-KDVVAWSALISGYVQNGQPNQALKVFLEMESKNV 99
++I YA G + AR +F++ E ++VV+W+ +I Y + G + L +F EM K
Sbjct: 124 NSLIHFYASCGYLETARKVFDRMCEWRNVVSWNVMIDSYAKVGDYDIVLIMFCEM-MKVY 182
Query: 100 KPDEFILVSLMSATSQLGHLELAQWVDSYV-SKSSIDLQQDHVI-AALLDMNAKCGNMDR 157
+PD + + S++ A LG L L WV ++V K ++ D ++ L+DM KCG+++
Sbjct: 183 EPDCYTMQSVIRACGGLGSLSLGMWVHAFVLKKCDKNVVCDVLVNTCLVDMYCKCGSLEI 242
Query: 158 ALKLFKEMPKRDLVSYCSMIQGLSIHGCGEDAVRLFNSML-MEGLVPDEVAFTIILTACS 216
A ++F+ M RD+ S+ S+I G ++HG + A+ F M+ +E +VP+ + F +L+AC+
Sbjct: 243 AKQVFEGMSYRDVSSWNSIILGFAVHGKAKAALDYFVRMVKVEKIVPNSITFVGVLSACN 302
Query: 217 HSGLVDEGWNYFQSMKQKYGISPSPDHFACMVDLLSRSGHLGDAYELMKSMH-EPHAGAW 275
HSG+VDEG YF+ M ++Y + PS H+ C+VDL +R+GH+ +A ++ M +P A W
Sbjct: 303 HSGMVDEGLMYFEMMTKEYNVEPSLVHYGCLVDLYARAGHIQEALNVVSEMPIKPDAVIW 362
Query: 276 GALLGAC-KLHGDSDLGEIVANQLFELEPQNAAN-YILLSNIYAAAERWIDVSLVRSRMR 333
+LL AC K H +L E +A Q+FE Y+LLS +YA+A RW DV L+R M
Sbjct: 363 RSLLDACYKQHASVELSEEMAKQIFESNGSVCGGAYVLLSKVYASASRWNDVGLLRKLMN 422
Query: 334 ERSVQKIPGCS 344
++ V K PGCS
Sbjct: 423 DKGVSKKPGCS 433
Score = 65.5 bits (158), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 60/241 (24%), Positives = 105/241 (43%), Gaps = 50/241 (20%)
Query: 4 RNVASWNAMLCGFVKDGDLSSARGVFDAM------------------------------- 32
RNV SWN M+ + K GD +F M
Sbjct: 150 RNVVSWNVMIDSYAKVGDYDIVLIMFCEMMKVYEPDCYTMQSVIRACGGLGSLSLGMWVH 209
Query: 33 ------PEKNVVS----FTTMIDGYAKAGDMAAARFLFEQATEKDVVAWSALISGYVQNG 82
+KNVV T ++D Y K G + A+ +FE + +DV +W+++I G+ +G
Sbjct: 210 AFVLKKCDKNVVCDVLVNTCLVDMYCKCGSLEIAKQVFEGMSYRDVSSWNSIILGFAVHG 269
Query: 83 QPNQALKVFLEM-ESKNVKPDEFILVSLMSATSQLGHL-ELAQWVDSYVSKSSIDLQQDH 140
+ AL F+ M + + + P+ V ++SA + G + E + + + +++ H
Sbjct: 270 KAKAALDYFVRMVKVEKIVPNSITFVGVLSACNHSGMVDEGLMYFEMMTKEYNVEPSLVH 329
Query: 141 VIAALLDMNAKCGNMDRALKLFKEMP-KRDLVSYCSMI-----QGLSIHGCGEDAVRLFN 194
L+D+ A+ G++ AL + EMP K D V + S++ Q S+ E A ++F
Sbjct: 330 Y-GCLVDLYARAGHIQEALNVVSEMPIKPDAVIWRSLLDACYKQHASVELSEEMAKQIFE 388
Query: 195 S 195
S
Sbjct: 389 S 389
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 51/226 (22%), Positives = 97/226 (42%), Gaps = 9/226 (3%)
Query: 70 AWSALISGYVQNGQPNQA----LKVFLEMESKNVKPDEFILVSLMSATSQLGHLELAQWV 125
W+ LI Y ++ Q K + + + PD+ ++ A + L L + V
Sbjct: 48 TWNILIQSYSKSTLHKQKAILLYKAIITEQENELFPDKHTYPFVLKACAYLFSLFEGKQV 107
Query: 126 DSYVSKSSIDLQQDHVIAALLDMNAKCGNMDRALKLFKEMPK-RDLVSYCSMIQGLSIHG 184
++V K +L ++ +L+ A CG ++ A K+F M + R++VS+ MI + G
Sbjct: 108 HAHVLKLGFELDT-YICNSLIHFYASCGYLETARKVFDRMCEWRNVVSWNVMIDSYAKVG 166
Query: 185 CGEDAVRLFNSMLMEGLVPDEVAFTIILTACSHSGLVDEG-WNY-FQSMKQKYGISPSPD 242
D V + +M+ PD ++ AC G + G W + F K +
Sbjct: 167 -DYDIVLIMFCEMMKVYEPDCYTMQSVIRACGGLGSLSLGMWVHAFVLKKCDKNVVCDVL 225
Query: 243 HFACMVDLLSRSGHLGDAYELMKSMHEPHAGAWGALLGACKLHGDS 288
C+VD+ + G L A ++ + M +W +++ +HG +
Sbjct: 226 VNTCLVDMYCKCGSLEIAKQVFEGMSYRDVSSWNSIILGFAVHGKA 271
>Medtr6g022140.2 | pentatricopeptide (PPR) repeat protein | HC |
chr6:7700828-7697127 | 20130731
Length = 774
Score = 208 bits (529), Expect = 8e-54, Method: Compositional matrix adjust.
Identities = 112/307 (36%), Positives = 180/307 (58%), Gaps = 6/307 (1%)
Query: 41 TTMIDGYAKAGDMAAARFLFEQATEKDVVAWSALISGYVQNGQPNQALKVFLEMESKNVK 100
++++D Y+ G++ FE + DVV+W++ I+G V+NG+ L +F + K
Sbjct: 294 SSLVDLYSFFGEIDDGLRCFEMTPKLDVVSWTSAIAGCVKNGKFENGLSLFYRFLADGRK 353
Query: 101 PDEFILVSLMSATSQLGHLELAQWVDSYVSKSSIDLQQDHVIA--ALLDMNAKCGNMDRA 158
DEFI+ S+M A + + + + Y K + D + + M AK G++D A
Sbjct: 354 LDEFIVSSVMGACADMAAARTGEQIQGYALKFGV---ADFTVVKNTQICMYAKSGDIDSA 410
Query: 159 LKLFKEMPKRDLVSYCSMIQGLSIHGCGEDAVRLFNSMLMEGLVPDEVAFTIILTACSHS 218
F+E K D+VS+ MI + HG ++++RLF M + G+VP+++ +LTACSH
Sbjct: 411 RNTFQETEKPDVVSWSVMICSYAQHGFAKESLRLFELMTVSGIVPNQITLLGVLTACSHG 470
Query: 219 GLVDEGWNYFQSMKQKYGISPSPDHFACMVDLLSRSGHLGDAYELM-KSMHEPHAGAWGA 277
GLVDEG Y+++MK+ YG++ + H AC+VDLL R+G L +A + S E W A
Sbjct: 471 GLVDEGLGYYETMKKDYGMAANVKHSACIVDLLGRAGRLEEAQRFIYDSGFEDDPVLWRA 530
Query: 278 LLGACKLHGDSDLGEIVANQLFELEPQNAANYILLSNIYAAAERWIDVSLVRSRMRERSV 337
LLGACK+H D+++G+ +A+++ ELEP AA+Y+LL N+Y + VR M++R V
Sbjct: 531 LLGACKVHKDTEMGKRIADKVIELEPHEAASYVLLYNLYNDVGKKKHALEVRKLMQDRGV 590
Query: 338 QKIPGCS 344
+K PG S
Sbjct: 591 KKEPGIS 597
Score = 95.1 bits (235), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 68/257 (26%), Positives = 126/257 (49%), Gaps = 8/257 (3%)
Query: 36 NVVSFTTMIDGYAKAGDMAAARFLFE--QATEKDVVAWSALISGYVQNG----QPNQALK 89
NVV T ++D YAK+G + A +FE K+ ++A+I+G+++ G +A++
Sbjct: 182 NVVVATALLDMYAKSGCLRDAVRVFEGFDLKSKNDFMYNAMIAGFLRGGLCCENAREAVR 241
Query: 90 VFLEMESKNVKPDEFILVSLMSATSQLGHLELAQWVDSYVSKSSIDLQQDHVIAALLDMN 149
VF EM VK +F S++ A G E+ + + V K+S++ + V ++L+D+
Sbjct: 242 VFNEMRRMGVKCSKFTFSSVVKACVGNGDFEVGRQIHGQVLKNSLE-GDEFVASSLVDLY 300
Query: 150 AKCGNMDRALKLFKEMPKRDLVSYCSMIQGLSIHGCGEDAVRLFNSMLMEGLVPDEVAFT 209
+ G +D L+ F+ PK D+VS+ S I G +G E+ + LF L +G DE +
Sbjct: 301 SFFGEIDDGLRCFEMTPKLDVVSWTSAIAGCVKNGKFENGLSLFYRFLADGRKLDEFIVS 360
Query: 210 IILTACSHSGLVDEGWNYFQSMKQKYGISPSPDHFACMVDLLSRSGHLGDAYELMKSMHE 269
++ AC+ G Q K+G++ + + ++SG + A + +
Sbjct: 361 SVMGACADMAAARTG-EQIQGYALKFGVADFTVVKNTQICMYAKSGDIDSARNTFQETEK 419
Query: 270 PHAGAWGALLGACKLHG 286
P +W ++ + HG
Sbjct: 420 PDVVSWSVMICSYAQHG 436
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 68/263 (25%), Positives = 122/263 (46%), Gaps = 17/263 (6%)
Query: 42 TMIDGYAKAGDMAAARFLFEQATEKDVVAWSALISGYVQNGQPNQALKVF---LEMESKN 98
++I+ Y+K + +RFLF+ ++ KD V+W+++IS Y + G +VF M
Sbjct: 82 SLINMYSKCNQIQTSRFLFDNSSIKDNVSWNSIISAYAKLGTKTSYGEVFQLVYRMHRFG 141
Query: 99 VKPDEFILVSLMSATSQL--GHLELAQWVDSYVSKSSIDLQQDHVIAALLDMNAKCGNMD 156
++ L S+++A + + + + K +D V ALLDM AK G +
Sbjct: 142 YAFSDYTLSSVLNACCFCVDDNCFYGRLIHGFGIKLGLDFNVV-VATALLDMYAKSGCLR 200
Query: 157 RALKLFK--EMPKRDLVSYCSMIQGLSIHG-CGE---DAVRLFNSMLMEGLVPDEVAFTI 210
A+++F+ ++ ++ Y +MI G G C E +AVR+FN M G+ + F+
Sbjct: 201 DAVRVFEGFDLKSKNDFMYNAMIAGFLRGGLCCENAREAVRVFNEMRRMGVKCSKFTFSS 260
Query: 211 ILTACSHSGLVDEGWNYFQSMKQKYGISPSPDHF--ACMVDLLSRSGHLGDAYELMKSMH 268
++ AC +G + G Q Q S D F + +VDL S G + D +
Sbjct: 261 VVKACVGNGDFEVGR---QIHGQVLKNSLEGDEFVASSLVDLYSFFGEIDDGLRCFEMTP 317
Query: 269 EPHAGAWGALLGACKLHGDSDLG 291
+ +W + + C +G + G
Sbjct: 318 KLDVVSWTSAIAGCVKNGKFENG 340
>Medtr6g022140.1 | pentatricopeptide (PPR) repeat protein | HC |
chr6:7700828-7696262 | 20130731
Length = 857
Score = 207 bits (528), Expect = 9e-54, Method: Compositional matrix adjust.
Identities = 112/307 (36%), Positives = 180/307 (58%), Gaps = 6/307 (1%)
Query: 41 TTMIDGYAKAGDMAAARFLFEQATEKDVVAWSALISGYVQNGQPNQALKVFLEMESKNVK 100
++++D Y+ G++ FE + DVV+W++ I+G V+NG+ L +F + K
Sbjct: 294 SSLVDLYSFFGEIDDGLRCFEMTPKLDVVSWTSAIAGCVKNGKFENGLSLFYRFLADGRK 353
Query: 101 PDEFILVSLMSATSQLGHLELAQWVDSYVSKSSIDLQQDHVIA--ALLDMNAKCGNMDRA 158
DEFI+ S+M A + + + + Y K + D + + M AK G++D A
Sbjct: 354 LDEFIVSSVMGACADMAAARTGEQIQGYALKFGV---ADFTVVKNTQICMYAKSGDIDSA 410
Query: 159 LKLFKEMPKRDLVSYCSMIQGLSIHGCGEDAVRLFNSMLMEGLVPDEVAFTIILTACSHS 218
F+E K D+VS+ MI + HG ++++RLF M + G+VP+++ +LTACSH
Sbjct: 411 RNTFQETEKPDVVSWSVMICSYAQHGFAKESLRLFELMTVSGIVPNQITLLGVLTACSHG 470
Query: 219 GLVDEGWNYFQSMKQKYGISPSPDHFACMVDLLSRSGHLGDAYELM-KSMHEPHAGAWGA 277
GLVDEG Y+++MK+ YG++ + H AC+VDLL R+G L +A + S E W A
Sbjct: 471 GLVDEGLGYYETMKKDYGMAANVKHSACIVDLLGRAGRLEEAQRFIYDSGFEDDPVLWRA 530
Query: 278 LLGACKLHGDSDLGEIVANQLFELEPQNAANYILLSNIYAAAERWIDVSLVRSRMRERSV 337
LLGACK+H D+++G+ +A+++ ELEP AA+Y+LL N+Y + VR M++R V
Sbjct: 531 LLGACKVHKDTEMGKRIADKVIELEPHEAASYVLLYNLYNDVGKKKHALEVRKLMQDRGV 590
Query: 338 QKIPGCS 344
+K PG S
Sbjct: 591 KKEPGIS 597
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 68/257 (26%), Positives = 126/257 (49%), Gaps = 8/257 (3%)
Query: 36 NVVSFTTMIDGYAKAGDMAAARFLFE--QATEKDVVAWSALISGYVQNG----QPNQALK 89
NVV T ++D YAK+G + A +FE K+ ++A+I+G+++ G +A++
Sbjct: 182 NVVVATALLDMYAKSGCLRDAVRVFEGFDLKSKNDFMYNAMIAGFLRGGLCCENAREAVR 241
Query: 90 VFLEMESKNVKPDEFILVSLMSATSQLGHLELAQWVDSYVSKSSIDLQQDHVIAALLDMN 149
VF EM VK +F S++ A G E+ + + V K+S++ + V ++L+D+
Sbjct: 242 VFNEMRRMGVKCSKFTFSSVVKACVGNGDFEVGRQIHGQVLKNSLE-GDEFVASSLVDLY 300
Query: 150 AKCGNMDRALKLFKEMPKRDLVSYCSMIQGLSIHGCGEDAVRLFNSMLMEGLVPDEVAFT 209
+ G +D L+ F+ PK D+VS+ S I G +G E+ + LF L +G DE +
Sbjct: 301 SFFGEIDDGLRCFEMTPKLDVVSWTSAIAGCVKNGKFENGLSLFYRFLADGRKLDEFIVS 360
Query: 210 IILTACSHSGLVDEGWNYFQSMKQKYGISPSPDHFACMVDLLSRSGHLGDAYELMKSMHE 269
++ AC+ G Q K+G++ + + ++SG + A + +
Sbjct: 361 SVMGACADMAAARTG-EQIQGYALKFGVADFTVVKNTQICMYAKSGDIDSARNTFQETEK 419
Query: 270 PHAGAWGALLGACKLHG 286
P +W ++ + HG
Sbjct: 420 PDVVSWSVMICSYAQHG 436
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 68/263 (25%), Positives = 122/263 (46%), Gaps = 17/263 (6%)
Query: 42 TMIDGYAKAGDMAAARFLFEQATEKDVVAWSALISGYVQNGQPNQALKVF---LEMESKN 98
++I+ Y+K + +RFLF+ ++ KD V+W+++IS Y + G +VF M
Sbjct: 82 SLINMYSKCNQIQTSRFLFDNSSIKDNVSWNSIISAYAKLGTKTSYGEVFQLVYRMHRFG 141
Query: 99 VKPDEFILVSLMSATSQL--GHLELAQWVDSYVSKSSIDLQQDHVIAALLDMNAKCGNMD 156
++ L S+++A + + + + K +D V ALLDM AK G +
Sbjct: 142 YAFSDYTLSSVLNACCFCVDDNCFYGRLIHGFGIKLGLDFNVV-VATALLDMYAKSGCLR 200
Query: 157 RALKLFK--EMPKRDLVSYCSMIQGLSIHG-CGE---DAVRLFNSMLMEGLVPDEVAFTI 210
A+++F+ ++ ++ Y +MI G G C E +AVR+FN M G+ + F+
Sbjct: 201 DAVRVFEGFDLKSKNDFMYNAMIAGFLRGGLCCENAREAVRVFNEMRRMGVKCSKFTFSS 260
Query: 211 ILTACSHSGLVDEGWNYFQSMKQKYGISPSPDHF--ACMVDLLSRSGHLGDAYELMKSMH 268
++ AC +G + G Q Q S D F + +VDL S G + D +
Sbjct: 261 VVKACVGNGDFEVGR---QIHGQVLKNSLEGDEFVASSLVDLYSFFGEIDDGLRCFEMTP 317
Query: 269 EPHAGAWGALLGACKLHGDSDLG 291
+ +W + + C +G + G
Sbjct: 318 KLDVVSWTSAIAGCVKNGKFENG 340
>Medtr4g011570.1 | pentatricopeptide (PPR) repeat protein | HC |
chr4:2848688-2851472 | 20130731
Length = 873
Score = 207 bits (527), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 114/309 (36%), Positives = 176/309 (56%), Gaps = 4/309 (1%)
Query: 37 VVSFTTMIDGYAKAGDMAAARFLFEQATEKDVVAWSALISGYVQNGQPNQALKVFLEMES 96
V+ +ID YAK + A +F +K++++W+++I G N + AL F EM
Sbjct: 437 VIVANKLIDMYAKCKCIDKALEVFHSIRDKNIISWTSIILGLRINNRCYDALFFFKEMMR 496
Query: 97 KNVKPDEFILVSLMSATSQLGHLELAQWVDSYVSKSSIDLQQDHVIAALLDMNAKCGNMD 156
+ KP+ LV ++SA +++G + + +Y ++ + ++ A+LDM +CG M+
Sbjct: 497 RQ-KPNWVTLVCVLSACARIGAFTCGKEIHAYALRTGVS-DDGYMPNAVLDMYVRCGRME 554
Query: 157 RALKLFKEMPKRDLVSYCSMIQGLSIHGCGEDAVRLFNSMLMEGLVPDEVAFTIILTACS 216
A K F + + D+ ++ ++ G + G G A LF ML +VP+EV F IL ACS
Sbjct: 555 YAWKQFFSIDQ-DVSTWNILLTGYAERGKGTLATELFRRMLESNVVPNEVTFISILCACS 613
Query: 217 HSGLVDEGWNYFQSMKQKYGISPSPDHFACMVDLLSRSGHLGDAYELMKSM-HEPHAGAW 275
SG+V EG Y+ SMK KY I P+ H+AC+VDLL R+G L DAYE ++ + +P W
Sbjct: 614 RSGMVAEGLEYYDSMKYKYSIKPNLKHYACVVDLLGRAGKLEDAYEFIQKIPMKPDPAVW 673
Query: 276 GALLGACKLHGDSDLGEIVANQLFELEPQNAANYILLSNIYAAAERWIDVSLVRSRMRER 335
GALL AC++H +LGE+ A +F + + YILLSN+YA W V+ VR MR+
Sbjct: 674 GALLNACRIHRRVELGELAAKNIFHDDTTSVGYYILLSNLYADNNIWDKVAEVRKMMRQN 733
Query: 336 SVQKIPGCS 344
+ PGCS
Sbjct: 734 GIIVDPGCS 742
Score = 124 bits (310), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 87/371 (23%), Positives = 167/371 (45%), Gaps = 66/371 (17%)
Query: 1 MPQRNVASWNAMLCGFVKDGDLSSARGVFDAMP--------------------------- 33
MP+RN+ SWN ++ G+ K G A ++D M
Sbjct: 160 MPERNLFSWNVLVGGYAKGGFFDEALNLYDRMLWVGVRPDVYTFPCVLRTCGGVPDLVKG 219
Query: 34 ------------EKNVVSFTTMIDGYAKAGDMAAARFLFEQATEKDVVAWSALISGYVQN 81
E +V +I YAK GD+ AR +F++ +KD ++W+A+I+G +N
Sbjct: 220 REIHVHVLRFGFESDVDVINALITMYAKCGDIDTARLVFDKMPKKDRISWNAMIAGCFEN 279
Query: 82 GQPNQALKVFLEMESKNVKPDEFILVSLMSATSQLGHLELAQWVDSYVSKSSIDLQQDHV 141
G+ + L +F M V PD + S+++A +G L + + YV ++ + V
Sbjct: 280 GECLEGLTLFCRMIEYPVDPDLMTMTSVITACELIGDERLGREIHGYVMRTKFS-RDPSV 338
Query: 142 IAALLDMNAKCGNMDRALKLFKEMPKRDLVSYCSMIQGLSIHGCGEDAVRLFNSMLMEGL 201
+L+ M + G ++ A K+F + RD+V + +MI G + + A+ + M EG+
Sbjct: 339 YNSLIQMYSSVGLVEEAEKVFSQTECRDVVMWTAMISGYENNLMHQKALETYKMMEAEGI 398
Query: 202 VPDEVAFTIILTACSHSGLVDEGWNYFQSMKQK----YGISPSPDHFACMVDLLSRSGHL 257
+PDE+ ++L+ACS +D G N + K+ Y I + ++D+ ++ +
Sbjct: 399 IPDEITIGVVLSACSCLCDLDTGMNLHEKAKKTGLIFYVIVANK-----LIDMYAKCKCI 453
Query: 258 GDAYELMKSMHEPHAGAWGALLGACKLHGDSDLGEIVANQLF-------ELEPQNAANYI 310
A E+ S+ + + +W +++ LG + N+ + E+ + N++
Sbjct: 454 DKALEVFHSIRDKNIISWTSII----------LGLRINNRCYDALFFFKEMMRRQKPNWV 503
Query: 311 LLSNIYAAAER 321
L + +A R
Sbjct: 504 TLVCVLSACAR 514
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 62/241 (25%), Positives = 120/241 (49%), Gaps = 8/241 (3%)
Query: 42 TMIDGYAKAGDMAAARFLFEQATEKDVVAWSALISGYVQNGQPNQALKVFLEMESKNVKP 101
++ + K G++ A ++F + E+++ +W+ L+ GY + G ++AL ++ M V+P
Sbjct: 139 VLLSMFVKFGNLVDAWYVFGRMPERNLFSWNVLVGGYAKGGFFDEALNLYDRMLWVGVRP 198
Query: 102 DEFILVSLMSATSQLGHLELAQWVDSYVSKSSIDLQQDHVIAALLDMNAKCGNMDRALKL 161
D + ++ + L + + +V + + D VI AL+ M AKCG++D A +
Sbjct: 199 DVYTFPCVLRTCGGVPDLVKGREIHVHVLRFGFESDVD-VINALITMYAKCGDIDTARLV 257
Query: 162 FKEMPKRDLVSYCSMIQGLSIHGCGEDAVRLFNSMLMEGLVPDEVAFTIILTACSHSG-- 219
F +MPK+D +S+ +MI G +G + + LF M+ + PD + T ++TAC G
Sbjct: 258 FDKMPKKDRISWNAMIAGCFENGECLEGLTLFCRMIEYPVDPDLMTMTSVITACELIGDE 317
Query: 220 -LVDEGWNYFQSMKQKYGISPSPDHFACMVDLLSRSGHLGDAYELMKSMHEPHAGAWGAL 278
L E Y M+ K+ S P + ++ + S G + +A ++ W A+
Sbjct: 318 RLGREIHGYV--MRTKF--SRDPSVYNSLIQMYSSVGLVEEAEKVFSQTECRDVVMWTAM 373
Query: 279 L 279
+
Sbjct: 374 I 374
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 45/197 (22%), Positives = 87/197 (44%), Gaps = 11/197 (5%)
Query: 114 SQLGHLELAQW---------VDSYVSKSSIDLQQDHVIA-ALLDMNAKCGNMDRALKLFK 163
S + + L +W V SY++KS + + LL M K GN+ A +F
Sbjct: 99 SYIALVRLCEWKRARKEGSRVWSYITKSKMMTHLSVKLGNVLLSMFVKFGNLVDAWYVFG 158
Query: 164 EMPKRDLVSYCSMIQGLSIHGCGEDAVRLFNSMLMEGLVPDEVAFTIILTACSHSGLVDE 223
MP+R+L S+ ++ G + G ++A+ L++ ML G+ PD F +L C + +
Sbjct: 159 RMPERNLFSWNVLVGGYAKGGFFDEALNLYDRMLWVGVRPDVYTFPCVLRTCGGVPDLVK 218
Query: 224 GWNYFQSMKQKYGISPSPDHFACMVDLLSRSGHLGDAYELMKSMHEPHAGAWGALLGACK 283
G ++G D ++ + ++ G + A + M + +W A++ C
Sbjct: 219 G-REIHVHVLRFGFESDVDVINALITMYAKCGDIDTARLVFDKMPKKDRISWNAMIAGCF 277
Query: 284 LHGDSDLGEIVANQLFE 300
+G+ G + ++ E
Sbjct: 278 ENGECLEGLTLFCRMIE 294
>Medtr5g008840.1 | pentatricopeptide (PPR) repeat protein | HC |
chr5:1959596-1956593 | 20130731
Length = 831
Score = 207 bits (527), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 116/387 (29%), Positives = 198/387 (51%), Gaps = 45/387 (11%)
Query: 1 MPQRNVASWNAMLCGFVKDGDLSSARGVFDAM------PEKNVVSF-------------- 40
M ++ SWNA+L G+ + D A +F M P++ ++
Sbjct: 378 MSSPSLISWNAILSGYNQSADHGEAVELFRKMQFQWQNPDRTTLAIILSSCAELGLLEAG 437
Query: 41 -------------------TTMIDGYAKAGDMAAARFLFEQATEKDVVAWSALISGYVQN 81
+++I+ Y+K G M ++ +F + +E DVV W+++I+G+ N
Sbjct: 438 KQVHAVSQKLGFYDDVYVASSLINVYSKCGKMEVSKHVFSKLSELDVVCWNSMIAGFSIN 497
Query: 82 GQPNQALKVFLEMESKNVKPDEFILVSLMSATSQLGHLELAQWVDSYVSKSSIDLQQDHV 141
AL F M P EF ++ S+ ++L L Q + + + K D D+V
Sbjct: 498 SLEQDALACFKRMRQFGFFPSEFSFATIASSCAKLSSLFQGQQIHAQIIK---DGYVDNV 554
Query: 142 I--AALLDMNAKCGNMDRALKLFKEMPKRDLVSYCSMIQGLSIHGCGEDAVRLFNSMLME 199
++L++M KCG++ A F MP +++V++ MI G + +G G +AV L+ M+
Sbjct: 555 FVGSSLVEMYCKCGDVGAARYYFDMMPGKNIVTWNEMIHGYAHNGYGLEAVSLYKDMISS 614
Query: 200 GLVPDEVAFTIILTACSHSGLVDEGWNYFQSMKQKYGISPSPDHFACMVDLLSRSGHLGD 259
G PD++ F +LTACSHS LVDEG F SM QK+ + P DH+ C++D L R G +
Sbjct: 615 GEKPDDITFVAVLTACSHSALVDEGVEIFSSMLQKFEVVPKLDHYTCIIDCLGRVGRFNE 674
Query: 260 AYELMKSM-HEPHAGAWGALLGACKLHGDSDLGEIVANQLFELEPQNAANYILLSNIYAA 318
++ +M ++ W +L +C++H + L + A +L L P+N+A Y+LL+N+Y++
Sbjct: 675 VEVILDTMPYKDDTIVWEVVLSSCRVHANVSLAKRAAEELHRLNPRNSAPYVLLANMYSS 734
Query: 319 AERWIDVSLVRSRMRERSVQKIPGCSK 345
RW D +VR M + + K PG S+
Sbjct: 735 MGRWDDAQVVRDLMSDNQIHKDPGYSR 761
Score = 112 bits (280), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 65/240 (27%), Positives = 128/240 (53%), Gaps = 16/240 (6%)
Query: 1 MPQRNVASWNAMLCGFVKDGDLSSARGVFDAMP----EKNVVSFTTMIDGYAKAGDMAAA 56
+ + +V SWN M+ G+ D A F M E + V++ M+ K+GD+
Sbjct: 312 LDKHSVVSWNIMISGYGNRCDSEKALECFQRMQCCGYEPDDVTYINMLTACVKSGDVKVG 371
Query: 57 RFLFEQATEKDVVAWSALISGYVQNGQPNQALKVFLEMESKNVKPDEFILVSLMSATSQL 116
R +F+ + +++W+A++SGY Q+ +A+++F +M+ + PD L ++S+ ++L
Sbjct: 372 RQIFDCMSSPSLISWNAILSGYNQSADHGEAVELFRKMQFQWQNPDRTTLAIILSSCAEL 431
Query: 117 GHLELAQWVDSYVSKSSIDLQQDHVIAALLDMNAKCGNMDRALKLFKEMPKRDLVSYCSM 176
G LE + V + VS+ +V ++L+++ +KCG M+ + +F ++ + D+V + SM
Sbjct: 432 GLLEAGKQVHA-VSQKLGFYDDVYVASSLINVYSKCGKMEVSKHVFSKLSELDVVCWNSM 490
Query: 177 IQGLSIHGCGEDAVRLFNSMLMEGLVPDEVAFTIILTACS-----------HSGLVDEGW 225
I G SI+ +DA+ F M G P E +F I ++C+ H+ ++ +G+
Sbjct: 491 IAGFSINSLEQDALACFKRMRQFGFFPSEFSFATIASSCAKLSSLFQGQQIHAQIIKDGY 550
Score = 102 bits (253), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 70/286 (24%), Positives = 137/286 (47%), Gaps = 13/286 (4%)
Query: 16 FVKDGDLSSARGVFDAMPEKNVVSFTTMIDGYAKAGDMAAARFLFEQATEKDVVAWSALI 75
+ K ++SA VFD +P KN+ S+ ++ + K+ ++ A LF Q E++ V+ + +I
Sbjct: 50 YSKCNQITSAHHVFDKIPHKNIFSYNAILSAFCKSNNLQYACRLFLQMPERNTVSLNTII 109
Query: 76 SGYVQNGQPNQALKVF-LEMESKNVKPDEFILVSLMSATSQLGHLELAQWVDSYVSKSSI 134
+ V+NG QAL + L M ++VKP ++ SA L + + V K
Sbjct: 110 TTMVKNGYERQALDTYDLMMVYESVKPSHITFATVFSACGGLKDVNCGRRNHGLVLKVGF 169
Query: 135 DLQQDHVIAALLDMNAKCGNMDRALKLFKEMPKRDLVSYCSMIQGLSIHGCGEDAVRLFN 194
D +V ALL M KCG + A ++F+ + + + V++ +M+ GLS ++ + LF
Sbjct: 170 D-SNIYVSNALLCMYTKCGLNEDAFRVFEGIVEPNEVTFTTMMGGLSQTNQVKEGLELFR 228
Query: 195 SMLMEGLVPDEVAFTIILTACSHS---GLVDEGWNY--------FQSMKQKYGISPSPDH 243
ML +G+ D V+ + IL C+ G+ D+ ++ K+G
Sbjct: 229 LMLRKGICVDSVSLSTILVICAKGVSFGVCDDSRGLSTNAQGKQIHTLAVKHGFERDLHL 288
Query: 244 FACMVDLLSRSGHLGDAYELMKSMHEPHAGAWGALLGACKLHGDSD 289
++D+ +++G + A + +++ + +W ++ DS+
Sbjct: 289 CNSLLDMYAKTGDMDSAENVFENLDKHSVVSWNIMISGYGNRCDSE 334
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 88/342 (25%), Positives = 138/342 (40%), Gaps = 70/342 (20%)
Query: 1 MPQRNVASWNAMLCGFVKDGDLSSARGVFDAM-----PEKNVVSFTTMIDGYAKAGDMAA 55
MP+RN S N ++ VK+G A +D M + + ++F T+ D+
Sbjct: 97 MPERNTVSLNTIITTMVKNGYERQALDTYDLMMVYESVKPSHITFATVFSACGGLKDVNC 156
Query: 56 AR----FLFEQATEKDVVAWSALISGYVQNGQPNQALKVFLEMESKNVKPDEFILVSLMS 111
R + + + ++ +AL+ Y + G A +VF + V+P+E ++M
Sbjct: 157 GRRNHGLVLKVGFDSNIYVSNALLCMYTKCGLNEDAFRVFEGI----VEPNEVTFTTMMG 212
Query: 112 ATSQLGH----LELAQW-------VDSYVSKSSI-------------------------- 134
SQ LEL + VDS VS S+I
Sbjct: 213 GLSQTNQVKEGLELFRLMLRKGICVDS-VSLSTILVICAKGVSFGVCDDSRGLSTNAQGK 271
Query: 135 ---------DLQQD-HVIAALLDMNAKCGNMDRALKLFKEMPKRDLVSYCSMIQGLSIHG 184
++D H+ +LLDM AK G+MD A +F+ + K +VS+ MI G
Sbjct: 272 QIHTLAVKHGFERDLHLCNSLLDMYAKTGDMDSAENVFENLDKHSVVSWNIMISGYGNRC 331
Query: 185 CGEDAVRLFNSMLMEGLVPDEVAFTIILTACSHSGLVDEGWNYFQSMKQKYGISPSPDHF 244
E A+ F M G PD+V + +LTAC SG V G F M SPS +
Sbjct: 332 DSEKALECFQRMQCCGYEPDDVTYINMLTACVKSGDVKVGRQIFDCMS-----SPSLISW 386
Query: 245 ACMVDLLSRSGHLGDAYELMKSM----HEPHAGAWGALLGAC 282
++ ++S G+A EL + M P +L +C
Sbjct: 387 NAILSGYNQSADHGEAVELFRKMQFQWQNPDRTTLAIILSSC 428
>Medtr5g038580.1 | PPR containing plant-like protein | HC |
chr5:16954387-16952525 | 20130731
Length = 620
Score = 207 bits (526), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 120/337 (35%), Positives = 191/337 (56%), Gaps = 8/337 (2%)
Query: 16 FVKDGDLSSARGVFDAMPEKNVVSFTTMIDGYAKAGDMAAARFLFEQATEK----DVVAW 71
+ K G SA VF ++N++++ +MI G + A LFE+ ++ D W
Sbjct: 283 YSKCGCWGSAFDVFSRSEKRNLITWNSMIAGMMMNSESERAVELFERMVDEGILPDSATW 342
Query: 72 SALISGYVQNGQPNQALKVFLEMESKNVKPDEFILVSLMSATSQLGHLELAQWVDSYVSK 131
++LISG+ Q G +A K F +M+ V P IL SL+S L A+ + Y +
Sbjct: 343 NSLISGFAQKGVCVEAFKYFSKMQCAGVAPCLKILTSLLSVCGDSCVLRSAKAIHGYALR 402
Query: 132 SSIDLQQDHVIAALLDMNAKCGNMDRALKLFKEMPKR--DLVSYCSMIQGLSIHGCGEDA 189
+D + D + AL+D KCG + A +F + + D + +MI G +G E A
Sbjct: 403 ICVD-KDDFLATALVDTYMKCGCVSFARFVFDQFDVKPDDPAFWNAMIGGYGTNGDYESA 461
Query: 190 VRLFNSMLMEGLVPDEVAFTIILTACSHSGLVDEGWNYFQSMKQKYGISPSPDHFACMVD 249
+F ML E + P+ F +L+ACSHSG ++ G +F+ M +KYG+ P P+HF C+VD
Sbjct: 462 FEVFYEMLDEMVQPNSATFVSVLSACSHSGQIERGLRFFR-MIRKYGLDPKPEHFGCVVD 520
Query: 250 LLSRSGHLGDAYELMKSMHEPHAGAWGALLGACKLHGDSDLGEIVANQLFELEPQNAANY 309
LL R+G LG+A +L++ + EP A + +LLGAC+ + DS+LGE +A +L ++EP+N A
Sbjct: 521 LLGRAGQLGEARDLVQELAEPPASVFDSLLGACRCYLDSNLGEEMAMKLIDIEPKNPAPL 580
Query: 310 ILLSNIYAAAERWIDVSLVRSRMRERSVQKIPGCSKL 346
++LSNIYAA RW +V +R + ++ + K G S +
Sbjct: 581 VVLSNIYAALGRWSEVERIRGLITDKGLDKNSGISMI 617
Score = 112 bits (279), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 81/281 (28%), Positives = 138/281 (49%), Gaps = 47/281 (16%)
Query: 1 MPQRNVASWNAMLCGFVKDG-------------------------DLSSARGVFDAMP-- 33
MPQ + ++NA+L G ++G L SAR V +
Sbjct: 97 MPQPTITAFNAVLSGLSRNGPRGQAVWLFRQIGFWNIRPNSVTIVSLLSARDVKNQSHVQ 156
Query: 34 -----------EKNVVSFTTMIDGYAKAGDMAAARFLFEQATEKDVVAWSALISGYVQNG 82
E +V T+++ Y+K G + ++ +FE K+VV ++A +SG +QNG
Sbjct: 157 QVHCLACKLGVEYDVYVSTSLVTAYSKCGVLVSSNKVFENLRVKNVVTYNAFMSGLLQNG 216
Query: 83 QPNQALKVFLEME-SKNVKPDEFILVSLMSATSQLGHLELAQWVDSYVSKSSIDLQQ-DH 140
VF +M + KP++ LVS++SA + L ++ L + V S+ L+ DH
Sbjct: 217 FHRVVFDVFKDMTMNLEEKPNKVTLVSVVSACATLSNIRLGKQVHGL----SMKLEACDH 272
Query: 141 V--IAALLDMNAKCGNMDRALKLFKEMPKRDLVSYCSMIQGLSIHGCGEDAVRLFNSMLM 198
V + +L+DM +KCG A +F KR+L+++ SMI G+ ++ E AV LF M+
Sbjct: 273 VMVVTSLVDMYSKCGCWGSAFDVFSRSEKRNLITWNSMIAGMMMNSESERAVELFERMVD 332
Query: 199 EGLVPDEVAFTIILTACSHSGLVDEGWNYFQSMKQKYGISP 239
EG++PD + +++ + G+ E + YF M Q G++P
Sbjct: 333 EGILPDSATWNSLISGFAQKGVCVEAFKYFSKM-QCAGVAP 372
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 64/268 (23%), Positives = 130/268 (48%), Gaps = 21/268 (7%)
Query: 41 TTMIDGYA-KAGDMAAARFLFEQATEKDVVAWSALISGYVQNGQPNQALKVFLEMESKNV 99
T +I YA A LF++ + + A++A++SG +NG QA+ +F ++ N+
Sbjct: 74 TALIASYAANTRSFHYALELFDEMPQPTITAFNAVLSGLSRNGPRGQAVWLFRQIGFWNI 133
Query: 100 KPDEFILVSLMSATSQLGHLELAQWVDSYVSKSSIDLQQDHVIAALLDMNAKCGNMDRAL 159
+P+ +VSL+SA + + Q V K ++ +V +L+ +KCG + +
Sbjct: 134 RPNSVTIVSLLSA-RDVKNQSHVQQVHCLACKLGVEYDV-YVSTSLVTAYSKCGVLVSSN 191
Query: 160 KLFKEMPKRDLVSYCSMIQGLSIHGCGEDAVRLFNSMLME-GLVPDEVAFTIILTACSHS 218
K+F+ + +++V+Y + + GL +G +F M M P++V +++AC+
Sbjct: 192 KVFENLRVKNVVTYNAFMSGLLQNGFHRVVFDVFKDMTMNLEEKPNKVTLVSVVSACATL 251
Query: 219 GLVDEGWNYFQSMKQKYGIS---PSPDH---FACMVDLLSRSGHLGDAYELMKSMHEPHA 272
+ G KQ +G+S + DH +VD+ S+ G G A+++ + +
Sbjct: 252 SNIRLG-------KQVHGLSMKLEACDHVMVVTSLVDMYSKCGCWGSAFDVFSRSEKRNL 304
Query: 273 GAWGALLGACKLHGDSDLGEIVANQLFE 300
W +++ ++ +S+ A +LFE
Sbjct: 305 ITWNSMIAGMMMNSESER----AVELFE 328
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 35/140 (25%), Positives = 65/140 (46%)
Query: 75 ISGYVQNGQPNQALKVFLEMESKNVKPDEFILVSLMSATSQLGHLELAQWVDSYVSKSSI 134
++ V NG +AL ++ + S + P+ F L+ A S L Q + +++ K+
Sbjct: 7 VTKLVANGLYKEALNLYSHLHSSSPTPNTFTFPILLKACSNLSSPSQTQILHAHLFKTGF 66
Query: 135 DLQQDHVIAALLDMNAKCGNMDRALKLFKEMPKRDLVSYCSMIQGLSIHGCGEDAVRLFN 194
A + A + AL+LF EMP+ + ++ +++ GLS +G AV LF
Sbjct: 67 HSHPHTSTALIASYAANTRSFHYALELFDEMPQPTITAFNAVLSGLSRNGPRGQAVWLFR 126
Query: 195 SMLMEGLVPDEVAFTIILTA 214
+ + P+ V +L+A
Sbjct: 127 QIGFWNIRPNSVTIVSLLSA 146
>Medtr7g100810.1 | pentatricopeptide (PPR) repeat protein | HC |
chr7:40624011-40626927 | 20130731
Length = 793
Score = 206 bits (524), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 118/379 (31%), Positives = 195/379 (51%), Gaps = 42/379 (11%)
Query: 5 NVASWNAMLCGFVKDGDLSSARGVFDAMP------------------------------- 33
++ SWNA++ F +GD + A F M
Sbjct: 333 DIVSWNAIIAAFADNGDANEAIDFFRQMIHIGLTPDSITYISLLCTCGSPVRLNQGRQIH 392
Query: 34 --------EKNVVSFTTMIDGYAKAGDMAAARFLFEQATEK-DVVAWSALISGYVQNGQP 84
+K + +++ Y K + A +F + ++V+W+A++S +Q Q
Sbjct: 393 SYIVKIGFDKEITVCNSLLTMYTKCSHLHDALNVFRDISRNANLVSWNAILSACLQKKQE 452
Query: 85 NQALKVFLEMESKNVKPDEFILVSLMSATSQLGHLELAQWVDSYVSKSSIDLQQDHVIAA 144
+ +++ EM KPD + +L+ ++L L + V Y KS + L V
Sbjct: 453 GETFRLYKEMHFSGNKPDSITITTLLGTCAELTSLGVGNQVHCYSIKSGLILDVS-VCNG 511
Query: 145 LLDMNAKCGNMDRALKLFKEMPKRDLVSYCSMIQGLSIHGCGEDAVRLFNSMLMEGLVPD 204
L+DM AKCG++ A +F D+VS+ S+I G + G G +A+ LF M G+ P+
Sbjct: 512 LIDMYAKCGSLKHARDVFDSTQNLDIVSWSSLIVGYAQCGLGHEALNLFRIMTNLGVQPN 571
Query: 205 EVAFTIILTACSHSGLVDEGWNYFQSMKQKYGISPSPDHFACMVDLLSRSGHLGDAYELM 264
EV + L+ACSH GLV+EGW ++SM+ ++GI P+ +HF+C+VDLL+R+G L +A +
Sbjct: 572 EVTYLGALSACSHIGLVEEGWRLYKSMETEHGIPPTREHFSCIVDLLARAGCLHEAETFI 631
Query: 265 -KSMHEPHAGAWGALLGACKLHGDSDLGEIVANQLFELEPQNAANYILLSNIYAAAERWI 323
KS + AW LL ACK H + D+ E A + +L+P N+A ++L NI+A+A W
Sbjct: 632 QKSGLDADITAWKTLLAACKTHNNVDIAERGAGNILKLDPSNSAAMVMLCNIHASAGNWE 691
Query: 324 DVSLVRSRMRERSVQKIPG 342
+V+ +R M++ VQK+PG
Sbjct: 692 EVAKLRKLMKQMGVQKVPG 710
Score = 112 bits (280), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 78/275 (28%), Positives = 138/275 (50%), Gaps = 11/275 (4%)
Query: 22 LSSARGVFDAMPEKN----VVSFTTMIDGYAKAGDMAAARFLFEQATEKDVVAWSALISG 77
L A+ + D + + N ++ MI+ Y K G M AR +F+ +VV+W+++ISG
Sbjct: 81 LDYAKKIHDHVLKSNYQPSIILQNHMINMYGKCGSMKDARKVFDTMQLPNVVSWTSMISG 140
Query: 78 YVQNGQPNQALKVFLEMESKNVKPDEFILVSLMSATSQLGHLELAQWVDSYVSKSSIDLQ 137
Y QNGQ N A+ ++++M PD+ S++ A G ++L + + ++V KS
Sbjct: 141 YSQNGQANDAIIMYIQMTRSGQFPDQLTFGSVIKACYIAGDIDLGRQLHAHVIKSWFG-- 198
Query: 138 QDHVIA--ALLDMNAKCGNMDRALKLFKEMPKRDLVSYCSMIQGLSIHGCGEDAVRLFNS 195
H+ + AL+ M G ++ A +F +P +DL+S+ +MI G G +A+ LF
Sbjct: 199 -HHLTSQNALISMYTNFGQIEHASNVFTRIPTKDLISWGTMITGYIQLGYRVEALYLFRD 257
Query: 196 MLMEGLV-PDEVAFTIILTACSHSGLVDEGWNYFQSMKQKYGISPSPDHFACMVDLLSRS 254
+L +G P+E F + +ACS S L E M K+G+ + + D+ ++
Sbjct: 258 LLRQGTYQPNEFIFGSVFSACS-SLLELEYGKQVHGMCVKFGLRRNVFAGCSLCDMYAKF 316
Query: 255 GHLGDAYELMKSMHEPHAGAWGALLGACKLHGDSD 289
G L A + P +W A++ A +GD++
Sbjct: 317 GFLPSAKMAFCQIKNPDIVSWNAIIAAFADNGDAN 351
Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 68/268 (25%), Positives = 124/268 (46%), Gaps = 7/268 (2%)
Query: 34 EKNVVSFTTMIDGYAKAGDMAAARFLFEQATEKDVVAWSALISGYVQNGQPNQALKVFLE 93
+NV + ++ D YAK G + +A+ F Q D+V+W+A+I+ + NG N+A+ F +
Sbjct: 300 RRNVFAGCSLCDMYAKFGFLPSAKMAFCQIKNPDIVSWNAIIAAFADNGDANEAIDFFRQ 359
Query: 94 MESKNVKPDEFILVSLMSATSQLGHLELAQWVDSYVSKSSIDLQQDHVIAALLDMNAKCG 153
M + PD +SL+ L + + SY+ K D ++ V +LL M KC
Sbjct: 360 MIHIGLTPDSITYISLLCTCGSPVRLNQGRQIHSYIVKIGFD-KEITVCNSLLTMYTKCS 418
Query: 154 NMDRALKLFKEMPKR-DLVSYCSMIQGLSIHGCGEDAVRLFNSMLMEGLVPDEVAFTIIL 212
++ AL +F+++ + +LVS+ +++ + RL+ M G PD + T +L
Sbjct: 419 HLHDALNVFRDISRNANLVSWNAILSACLQKKQEGETFRLYKEMHFSGNKPDSITITTLL 478
Query: 213 TACSHSGLVDEGWNYFQSMKQKYGISPSPDHFACMVDLLSRSGHLGDAYELMKSMHEPHA 272
C+ + G N K G+ ++D+ ++ G L A ++ S
Sbjct: 479 GTCAELTSLGVG-NQVHCYSIKSGLILDVSVCNGLIDMYAKCGSLKHARDVFDSTQNLDI 537
Query: 273 GAWGALL---GACKL-HGDSDLGEIVAN 296
+W +L+ C L H +L I+ N
Sbjct: 538 VSWSSLIVGYAQCGLGHEALNLFRIMTN 565
Score = 88.6 bits (218), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 70/282 (24%), Positives = 123/282 (43%), Gaps = 37/282 (13%)
Query: 4 RNVASWNAMLCGFVKDGDLSSARGVFDAMPEKNVVSFTTMIDGYAKAGDMAAARFLFEQA 63
++ S NA++ + G + A VF +P K+++S+ TMI GY + G A +LF
Sbjct: 199 HHLTSQNALISMYTNFGQIEHASNVFTRIPTKDLISWGTMITGYIQLGYRVEALYLF--- 255
Query: 64 TEKDVVAWSALISGYVQNGQPNQALKVFLEMESKNVKPDEFILVSLMSATSQLGHLELAQ 123
+D+ + +P+EFI S+ SA S L LE +
Sbjct: 256 --RDL-------------------------LRQGTYQPNEFIFGSVFSACSSLLELEYGK 288
Query: 124 WVDSYVSKSSIDLQQDHVIA--ALLDMNAKCGNMDRALKLFKEMPKRDLVSYCSMIQGLS 181
V K + + +V A +L DM AK G + A F ++ D+VS+ ++I +
Sbjct: 289 QVHGMCVKFGL---RRNVFAGCSLCDMYAKFGFLPSAKMAFCQIKNPDIVSWNAIIAAFA 345
Query: 182 IHGCGEDAVRLFNSMLMEGLVPDEVAFTIILTACSHSGLVDEGWNYFQSMKQKYGISPSP 241
+G +A+ F M+ GL PD + + +L C +++G S K G
Sbjct: 346 DNGDANEAIDFFRQMIHIGLTPDSITYISLLCTCGSPVRLNQG-RQIHSYIVKIGFDKEI 404
Query: 242 DHFACMVDLLSRSGHLGDAYELMKSM-HEPHAGAWGALLGAC 282
++ + ++ HL DA + + + + +W A+L AC
Sbjct: 405 TVCNSLLTMYTKCSHLHDALNVFRDISRNANLVSWNAILSAC 446
>Medtr7g033400.1 | PPR containing protein | HC |
chr7:12012362-12010888 | 20130731
Length = 486
Score = 205 bits (522), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 120/306 (39%), Positives = 189/306 (61%), Gaps = 7/306 (2%)
Query: 43 MIDGYAKAGDMAAARFLFEQATEKDVVAWSALISGYVQNGQPNQALKVFLEMESKNVKPD 102
++ GY+ +GD+ AR++F++ K++ W+ +I GY QN N+AL +F M +P+
Sbjct: 180 LVRGYSVSGDLVDARYVFDEIPMKNLSLWTTMICGYAQNCCYNEALDLFERMVVVGFEPN 239
Query: 103 EFILVSLMSATSQLGHLELAQWVDSYVSKSSIDLQQDHVI--AALLDMNAKCGNMDRALK 160
L S++S ++ G LEL + + ++ +++ VI AL+ M AK G++ A K
Sbjct: 240 GATLASVLSVCARSGCLELGERIHEFMRVKGVEVG---VILGTALVYMYAKNGDILTARK 296
Query: 161 LFKEMPKRDLVSYCSMIQGLSIHGCGEDAVRLFNSMLMEGLV-PDEVAFTIILTACSHSG 219
LF EMP+R++V++ +MI GL+ HG EDA+ LF M E +V P+ V F +L+AC H+G
Sbjct: 297 LFDEMPERNVVTWNAMICGLASHGHVEDALGLFECMKEEEIVVPNAVTFVGVLSACCHAG 356
Query: 220 LVDEGWNYFQSMKQKYGISPSPDHFACMVDLLSRSGHLGDAYELMKSMH-EPHAGAWGAL 278
L+D G F SMK +GI P+ +H+ CMVDLL R G L +A E++K M +P GAL
Sbjct: 357 LIDVGREVFCSMKVVHGIEPTIEHYGCMVDLLGRGGKLLEAEEVIKGMPWKPDVVILGAL 416
Query: 279 LGACKLHGDSDLGEIVANQLFELEPQNAANYILLSNIYAAAERWIDVSLVRSRMRERSVQ 338
L A K +G++++ E V Q+ L+P N ++ LSN+YA A +W +VS +R M+E ++
Sbjct: 417 LAASKNNGNTEVAERVVKQILTLDPHNHGVHVSLSNMYAEAGQWQEVSRLRKMMKEEKLK 476
Query: 339 KIPGCS 344
K PG S
Sbjct: 477 KAPGWS 482
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 58/239 (24%), Positives = 105/239 (43%), Gaps = 43/239 (17%)
Query: 1 MPQRNVASWNAMLCGFVKDGDLSSARGVFDAMP--------------------------- 33
+P +N++ W M+CG+ ++ + A +F+ M
Sbjct: 200 IPMKNLSLWTTMICGYAQNCCYNEALDLFERMVVVGFEPNGATLASVLSVCARSGCLELG 259
Query: 34 ------------EKNVVSFTTMIDGYAKAGDMAAARFLFEQATEKDVVAWSALISGYVQN 81
E V+ T ++ YAK GD+ AR LF++ E++VV W+A+I G +
Sbjct: 260 ERIHEFMRVKGVEVGVILGTALVYMYAKNGDILTARKLFDEMPERNVVTWNAMICGLASH 319
Query: 82 GQPNQALKVFLEM-ESKNVKPDEFILVSLMSATSQLGHLELAQWV-DSYVSKSSIDLQQD 139
G AL +F M E + V P+ V ++SA G +++ + V S I+ +
Sbjct: 320 GHVEDALGLFECMKEEEIVVPNAVTFVGVLSACCHAGLIDVGREVFCSMKVVHGIEPTIE 379
Query: 140 HVIAALLDMNAKCGNMDRALKLFKEMP-KRDLVSYCSMIQGLSIHGCGEDAVRLFNSML 197
H ++D+ + G + A ++ K MP K D+V +++ +G E A R+ +L
Sbjct: 380 HY-GCMVDLLGRGGKLLEAEEVIKGMPWKPDVVILGALLAASKNNGNTEVAERVVKQIL 437
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 47/171 (27%), Positives = 81/171 (47%), Gaps = 15/171 (8%)
Query: 1 MPQRNVASWNAMLCGFVKDGDLSSARGVFDAMPEK-----NVVSFTTMIDGYAKAGDMAA 55
MP+RNV +WNAM+CG G + A G+F+ M E+ N V+F ++ AG +
Sbjct: 301 MPERNVVTWNAMICGLASHGHVEDALGLFECMKEEEIVVPNAVTFVGVLSACCHAGLIDV 360
Query: 56 ARFLF-----EQATEKDVVAWSALISGYVQNGQPNQALKVFLEMESKNVKPDEFILVSLM 110
R +F E + + ++ + G+ +A +V M KPD IL +L+
Sbjct: 361 GREVFCSMKVVHGIEPTIEHYGCMVDLLGRGGKLLEAEEVIKGMPW---KPDVVILGALL 417
Query: 111 SATSQLGHLELAQWVDSYVSKSSIDLQQDHVIAALLDMNAKCGNMDRALKL 161
+A+ G+ E+A+ V + ++D V +L +M A+ G +L
Sbjct: 418 AASKNNGNTEVAERVVKQI--LTLDPHNHGVHVSLSNMYAEAGQWQEVSRL 466
>Medtr1g052100.1 | PPR containing plant-like protein | HC |
chr1:20983048-20985397 | 20130731
Length = 733
Score = 205 bits (521), Expect = 6e-53, Method: Compositional matrix adjust.
Identities = 110/304 (36%), Positives = 176/304 (57%), Gaps = 3/304 (0%)
Query: 43 MIDGYAKAGDMAAARFLFEQATEKDVVAWSALISGYVQNGQPNQALKVFLEMESKNVKPD 102
+I Y++ G + A +F K +++W+++ISG+V NG P Q L+ F + + ++KP+
Sbjct: 427 LISSYSRNGQIKRAFQIFSDLAYKSLISWNSIISGFVLNGYPMQGLEKFSALLNTHLKPN 486
Query: 103 EFILVSLMSATSQLGHLELAQWVDSYVSKSSIDLQQDHVIAALLDMNAKCGNMDRALKLF 162
+ L +S S ++ + V Y+ + D + + AL+ M +KCG +DR+L +F
Sbjct: 487 AYSLSLALSICSCTPDMDHGKQVHGYILRHGFD-SEISLGNALVTMYSKCGFLDRSLSVF 545
Query: 163 KEMPKRDLVSYCSMIQGLSIHGCGEDAVRLFNSM-LMEGLVPDEVAFTIILTACSHSGLV 221
EM +RD +++ ++I S HG G++AV F +M + G+ PD FT +L+ACSHSGLV
Sbjct: 546 NEMVERDTITWNAIISAYSQHGQGKEAVHCFEAMQISPGIKPDHATFTAVLSACSHSGLV 605
Query: 222 DEGWNYFQSMKQKYGISPSPDHFACMVDLLSRSGHLGDAYELMKSMH-EPHAGAWGALLG 280
D+ F M YG PS DHF+C+VDLL RSG+L +A ++ + H +L
Sbjct: 606 DDATRIFDIMVNIYGFVPSVDHFSCIVDLLGRSGYLDEAERVVTDGYFGAHPNMCWSLFS 665
Query: 281 ACKLHGDSDLGEIVANQLFELEPQNAANYILLSNIYAAAERWIDVSLVRSRMRERSVQKI 340
AC +HG+ LG VA L E E N + Y+LL+NI A A +W + + +R +++ K
Sbjct: 666 ACAVHGNLTLGRKVARLLLEREQNNPSVYVLLANICAEAGQWEEAAKLRDMVKQFGTTKQ 725
Query: 341 PGCS 344
PGCS
Sbjct: 726 PGCS 729
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 59/241 (24%), Positives = 120/241 (49%), Gaps = 7/241 (2%)
Query: 47 YAKAGDMAAARFLFEQATE-KDVVAWSALISGYVQNGQPNQALKVFLEMESKNVKPDEFI 105
Y+ G + AR +FE E +D+V+W+ ++S + Q A+ +++M + ++PD F
Sbjct: 333 YSFFGKVNEARSVFEIMEESRDLVSWNVMVSMFFQENINEDAILTYIKMRREGIEPDAFT 392
Query: 106 LVSLMSATSQLGHLELAQWVDSYVSKSSIDLQQDHVIAALLDMNAKCGNMDRALKLFKEM 165
SL+SA+ L ++ + + S + K+ L + V+ AL+ ++ G + RA ++F ++
Sbjct: 393 YGSLLSASDSL---QMVEMIHSVLCKNG--LNKVEVLNALISSYSRNGQIKRAFQIFSDL 447
Query: 166 PKRDLVSYCSMIQGLSIHGCGEDAVRLFNSMLMEGLVPDEVAFTIILTACSHSGLVDEGW 225
+ L+S+ S+I G ++G + F+++L L P+ + ++ L+ CS + +D G
Sbjct: 448 AYKSLISWNSIISGFVLNGYPMQGLEKFSALLNTHLKPNAYSLSLALSICSCTPDMDHG- 506
Query: 226 NYFQSMKQKYGISPSPDHFACMVDLLSRSGHLGDAYELMKSMHEPHAGAWGALLGACKLH 285
++G +V + S+ G L + + M E W A++ A H
Sbjct: 507 KQVHGYILRHGFDSEISLGNALVTMYSKCGFLDRSLSVFNEMVERDTITWNAIISAYSQH 566
Query: 286 G 286
G
Sbjct: 567 G 567
Score = 88.6 bits (218), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 61/208 (29%), Positives = 104/208 (50%), Gaps = 3/208 (1%)
Query: 10 NAMLCGFVKDGDLSSARGVFDAMPEKNVVSFTTMIDGYAKAGDMAAARFLFEQATEKDVV 69
N++L + K DL S VFD + +V S+TT++ ++ D+ A +F++ + V
Sbjct: 94 NSLLSLYAKAHDLVSVELVFDDIQCPDVYSWTTVLSAISRLSDIDYALHVFDKMPKCYVA 153
Query: 70 AWSALISGYVQNGQPNQALKVFLEMESKNVKPDEFILVSLMSATSQLGHLELAQWVDSYV 129
W+A+I+G NG + A ++ +M NV+ D + +++S L+ + V S V
Sbjct: 154 VWNAIITGCSDNGCEDVAFRLLKDMFRMNVRGDNYTFATMLSLCPLSEGLDYGRHVHSVV 213
Query: 130 SKSSIDLQQDHVIAALLDMNAKCGNMDRALKLFKEMPK--RDLVSYCSMIQGLSIHGCGE 187
KS L V+ +L+ M CG + K+F+EM R+ V+Y +MI G E
Sbjct: 214 VKSGF-LDWTSVVNSLITMYFNCGCVVDGYKVFEEMEGGVRNHVTYNAMIDGFVSVERFE 272
Query: 188 DAVRLFNSMLMEGLVPDEVAFTIILTAC 215
DA +F M + EV F +L++C
Sbjct: 273 DAFLMFRDMHRGSVCLSEVTFVSVLSSC 300
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 71/336 (21%), Positives = 130/336 (38%), Gaps = 66/336 (19%)
Query: 1 MPQRNVASWNAMLCG------------FVKD-------GD----------------LSSA 25
MP+ VA WNA++ G +KD GD L
Sbjct: 147 MPKCYVAVWNAIITGCSDNGCEDVAFRLLKDMFRMNVRGDNYTFATMLSLCPLSEGLDYG 206
Query: 26 RGVFDAMPEKNVVSFTTMIDG----YAKAGDMAAARFLFE--QATEKDVVAWSALISGYV 79
R V + + + +T++++ Y G + +FE + ++ V ++A+I G+V
Sbjct: 207 RHVHSVVVKSGFLDWTSVVNSLITMYFNCGCVVDGYKVFEEMEGGVRNHVTYNAMIDGFV 266
Query: 80 QNGQPNQALKVFLEMESKNVKPDEFILVSLMSATSQLGHLELAQWVDSYVSKSSIDLQQD 139
+ A +F +M +V E VS++S+ L + K D
Sbjct: 267 SVERFEDAFLMFRDMHRGSVCLSEVTFVSVLSSCCS---LRVGCQAQGLAIKMGFDCGYT 323
Query: 140 HVIAALLDMNAKCGNMDRALKLFKEMPK-RDLVSYCSMIQGLSIHGCGEDAVRLFNSMLM 198
V A + M + G ++ A +F+ M + RDLVS+ M+ EDA+ + M
Sbjct: 324 AVNNATMTMYSFFGKVNEARSVFEIMEESRDLVSWNVMVSMFFQENINEDAILTYIKMRR 383
Query: 199 EGLVPDEVAFTIILTACS--------HSGLVDEGWNYFQSMKQKYGISPSPDHFACMVDL 250
EG+ PD + +L+A HS L G N + + ++
Sbjct: 384 EGIEPDAFTYGSLLSASDSLQMVEMIHSVLCKNGLNKVEVLNA-------------LISS 430
Query: 251 LSRSGHLGDAYELMKSMHEPHAGAWGALLGACKLHG 286
SR+G + A+++ + +W +++ L+G
Sbjct: 431 YSRNGQIKRAFQIFSDLAYKSLISWNSIISGFVLNG 466
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 52/247 (21%), Positives = 105/247 (42%), Gaps = 35/247 (14%)
Query: 53 MAAARFLFEQATEKDVVAWSALISGYVQNGQPNQALKVFLEMESKNVKPDEFILVSLMSA 112
+ + R + + + ++ + ++ + Q ++LK+F ++ S + KPD L + ++A
Sbjct: 5 LFSQRIWTDTFSNQQILKLNHKLTHLTKTNQFYESLKLFTKIHSSH-KPDHCTLSTTITA 63
Query: 113 TSQLGHLEL-AQWVDSYVSKSSIDLQQDHVIAALLDMNAKC------------------- 152
TS+ H+ + + S+ K+++ HV +LL + AK
Sbjct: 64 TSKTRHVTVFGNQLHSFAIKTALK-AYSHVANSLLSLYAKAHDLVSVELVFDDIQCPDVY 122
Query: 153 ------------GNMDRALKLFKEMPKRDLVSYCSMIQGLSIHGCGEDAVRLFNSMLMEG 200
++D AL +F +MPK + + ++I G S +GC + A RL M
Sbjct: 123 SWTTVLSAISRLSDIDYALHVFDKMPKCYVAVWNAIITGCSDNGCEDVAFRLLKDMFRMN 182
Query: 201 LVPDEVAFTIILTACSHSGLVDEGWNYFQSMKQKYGISPSPDHFACMVDLLSRSGHLGDA 260
+ D F +L+ C S +D G + S+ K G ++ + G + D
Sbjct: 183 VRGDNYTFATMLSLCPLSEGLDYG-RHVHSVVVKSGFLDWTSVVNSLITMYFNCGCVVDG 241
Query: 261 YELMKSM 267
Y++ + M
Sbjct: 242 YKVFEEM 248
>Medtr4g094658.1 | pentatricopeptide (PPR) repeat protein | HC |
chr4:38663296-38660628 | 20130731
Length = 745
Score = 205 bits (521), Expect = 7e-53, Method: Compositional matrix adjust.
Identities = 128/384 (33%), Positives = 204/384 (53%), Gaps = 41/384 (10%)
Query: 1 MPQRNVASWNAMLCGFVKDGDLSSARGVFDAMPEKNVV----SFTTMIDG---------- 46
M +RNVA+WNAM+ G VK G A +F M V SF +++ G
Sbjct: 164 MTERNVATWNAMVTGLVKFGLNEEALLLFSRMNVLGFVPDEYSFGSVLRGCAHLRALFVG 223
Query: 47 -------------------------YAKAGDMAAARFLFEQATEKDVVAWSALISGYVQN 81
Y KAG + + + ++VAW+ L++G QN
Sbjct: 224 EQVHAYVAKCGFEFNSVVGCSLAHMYMKAGSLCNGERIIKWMPNCNLVAWNTLMAGKAQN 283
Query: 82 GQPNQALKVFLEMESKNVKPDEFILVSLMSATSQLGHLELAQWVDSYVSKSSIDLQQDHV 141
L + M+ +PD+ VS++S+ S+L L + + + V K+ V
Sbjct: 284 RCFEGVLDHYCMMKMAGYRPDKITFVSVISSCSELATLCQGKQIHAEVIKAGASSVVS-V 342
Query: 142 IAALLDMNAKCGNMDRALKLFKEMPKRDLVSYCSMIQGLSIHGCGEDAVRLFNSMLMEGL 201
I++L+ M +KCG++ ++K F E +RD+V + SMI HG E A++LFN E +
Sbjct: 343 ISSLVSMYSKCGSLQDSIKAFLECEERDVVIWSSMIAAYGFHGQCEKAIKLFNDKEKENM 402
Query: 202 VPDEVAFTIILTACSHSGLVDEGWNYFQSMKQKYGISPSPDHFACMVDLLSRSGHLGDAY 261
+EV F +L ACSHSGL D+G ++F M +KYG+ +H+ C+VDLL RSG L +A
Sbjct: 403 AGNEVTFLSLLYACSHSGLKDKGLDFFDMMVEKYGLKARLEHYTCVVDLLGRSGCLEEAE 462
Query: 262 ELMKSMH-EPHAGAWGALLGACKLHGDSDLGEIVANQLFELEPQNAANYILLSNIYAAAE 320
+++SM A W LL ACK+H + ++ VA ++ ++PQ+ A+Y+L++ I+A+A+
Sbjct: 463 TMIRSMPVSADAIIWKTLLSACKIHKNEEMARRVAEEVLRIDPQDPASYVLIAGIHASAK 522
Query: 321 RWIDVSLVRSRMRERSVQKIPGCS 344
RW +VS VR M+++ V+K PG S
Sbjct: 523 RWQNVSEVRRAMKDKMVKKEPGVS 546
Score = 120 bits (300), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 86/313 (27%), Positives = 157/313 (50%), Gaps = 9/313 (2%)
Query: 10 NAMLCGFVKDGDLSSARGVFDAMPEKNVVSFTTMIDGYAKAGDMAAARFLFEQATEKDVV 69
N +L + K G+L++A +FD MP +N +S MI Y + G++ A+ LF++ TE++V
Sbjct: 111 NHLLNFYSKFGELNNAVKLFDRMPRRNYMSCNIMIKAYLEMGNIENAKNLFDEMTERNVA 170
Query: 70 AWSALISGYVQNGQPNQALKVFLEMESKNVKPDEFILVSLMSATSQLGHLELAQWVDSYV 129
W+A+++G V+ G +AL +F M PDE+ S++ + L L + + V +YV
Sbjct: 171 TWNAMVTGLVKFGLNEEALLLFSRMNVLGFVPDEYSFGSVLRGCAHLRALFVGEQVHAYV 230
Query: 130 SKSSIDLQQDHVIAALLDMNAKCGNMDRALKLFKEMPKRDLVSYCSMIQGLSIHGCGEDA 189
+K + V +L M K G++ ++ K MP +LV++ +++ G + + C E
Sbjct: 231 AKCGFEFNSV-VGCSLAHMYMKAGSLCNGERIIKWMPNCNLVAWNTLMAGKAQNRCFEGV 289
Query: 190 VRLFNSMLMEGLVPDEVAFTIILTACSHSGLVDEGWNYFQSMKQKYGISPSPDHFACMVD 249
+ + M M G PD++ F ++++CS + +G + K G S + +V
Sbjct: 290 LDHYCMMKMAGYRPDKITFVSVISSCSELATLCQG-KQIHAEVIKAGASSVVSVISSLVS 348
Query: 250 LLSRSGHLGDAYELMKSMHEPHAGAWGALLGACKLHGDSDLGEIVANQLF-ELEPQNAA- 307
+ S+ G L D+ + E W +++ A HG + A +LF + E +N A
Sbjct: 349 MYSKCGSLQDSIKAFLECEERDVVIWSSMIAAYGFHGQCE----KAIKLFNDKEKENMAG 404
Query: 308 -NYILLSNIYAAA 319
LS +YA +
Sbjct: 405 NEVTFLSLLYACS 417
>Medtr3g012530.1 | pentatricopeptide (PPR) repeat protein | HC |
chr3:3530268-3532784 | 20130731
Length = 696
Score = 204 bits (520), Expect = 8e-53, Method: Compositional matrix adjust.
Identities = 114/384 (29%), Positives = 200/384 (52%), Gaps = 45/384 (11%)
Query: 1 MPQRNVASWNAMLCGFVKDGDLSSARGVFDAMPEK----NVVSFTTM------------- 43
MP+R+ +SW M+ G V + S A +F M E+ +F M
Sbjct: 184 MPERDSSSWMTMIGGLVDSRNYSEAFELFLCMWEEFNNGKSRTFAAMVRASARLDCIEVG 243
Query: 44 ----------------------IDGYAKAGDMAAARFLFEQATEKDVVAWSALISGYVQN 81
ID Y+K G++ AR +F+Q +K V W+ +I+GY
Sbjct: 244 RQIHTCILKRAVNGDPFVDCALIDMYSKCGNIEDARCVFDQMPQKTTVGWNTIIAGYAFR 303
Query: 82 GQPNQALKVFLEMESKNVKPDEFILVSLMSATSQLGHLELAQWVDSYVSKSSI--DLQQD 139
G +AL ++ +M K D F + +++ ++L LE + + + + DL +
Sbjct: 304 GFSEEALGIYYKMRDSGTKIDHFTISIVITICARLASLEHGKQGHAALVRRGFGTDLVAN 363
Query: 140 HVIAALLDMNAKCGNMDRALKLFKEMPKRDLVSYCSMIQGLSIHGCGEDAVRLFNSMLME 199
+AL++ +K G M+ A +F +M +++++S+ ++I G HG GE+A+ +F ML E
Sbjct: 364 ---SALVNFYSKWGRMENARHVFDKMHRKNIISWNALIAGYGHHGRGEEAIEMFEKMLQE 420
Query: 200 GLVPDEVAFTIILTACSHSGLVDEGWNYFQSMKQKYGISPSPDHFACMVDLLSRSGHLGD 259
+ P+ V F +L+ACS+SGL + GW FQSM Q + I P H+ACM++LL R G L +
Sbjct: 421 NMTPNHVTFLAVLSACSYSGLSERGWEIFQSMSQDHNIKPRAMHYACMIELLGREGLLDE 480
Query: 260 AYELMKSM-HEPHAGAWGALLGACKLHGDSDLGEIVANQLFELEPQNAANYILLSNIYAA 318
A L+++ P W ALL AC++H + +LG+ A +L+ +EP+ NY++L NIY +
Sbjct: 481 AVALIRNAPFPPTLNMWAALLIACRMHKNLELGKFAAEKLYGMEPEKLCNYVMLLNIYNS 540
Query: 319 AERWIDVSLVRSRMRERSVQKIPG 342
+ + + + V ++ + ++ +P
Sbjct: 541 SGKLKEAADVLQTLKRKGLRMLPA 564
Score = 97.1 bits (240), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 71/320 (22%), Positives = 156/320 (48%), Gaps = 16/320 (5%)
Query: 7 ASWNAMLCGFVKDGDLSSARGVFDAMP----EKNVVSFTTMIDGYAKAGDMAAARFLFEQ 62
++++A++ ++ + + VF+ M E ++ ++ + + M AR F+
Sbjct: 124 STYDALISACIRLRSIIGVKRVFNYMKNSGFELDLYMMNRVLFMHVQCNLMRDARTWFDD 183
Query: 63 ATEKDVVAWSALISGYVQNGQPNQALKVFLEM--ESKNVKPDEFILVSLMSATSQLGHLE 120
E+D +W +I G V + ++A ++FL M E N K F +++ A+++L +E
Sbjct: 184 MPERDSSSWMTMIGGLVDSRNYSEAFELFLCMWEEFNNGKSRTF--AAMVRASARLDCIE 241
Query: 121 LAQWVDSYVSKSSIDLQQDHVIAALLDMNAKCGNMDRALKLFKEMPKRDLVSYCSMIQGL 180
+ + + + + K +++ V AL+DM +KCGN++ A +F +MP++ V + ++I G
Sbjct: 242 VGRQIHTCILKRAVN-GDPFVDCALIDMYSKCGNIEDARCVFDQMPQKTTVGWNTIIAGY 300
Query: 181 SIHGCGEDAVRLFNSMLMEGLVPDEVAFTIILTACSHSGLVDEGWNYFQSMKQKYGISPS 240
+ G E+A+ ++ M G D +I++T C+ ++ G ++ ++ G
Sbjct: 301 AFRGFSEEALGIYYKMRDSGTKIDHFTISIVITICARLASLEHGKQGHAALVRR-GFGTD 359
Query: 241 PDHFACMVDLLSRSGHLGDAYELMKSMHEPHAGAWGALLGACKLHGDSDLGEIVANQLFE 300
+ +V+ S+ G + +A + MH + +W AL+ HG + A ++FE
Sbjct: 360 LVANSALVNFYSKWGRMENARHVFDKMHRKNIISWNALIAGYGHHGRGE----EAIEMFE 415
Query: 301 --LEPQNAANYILLSNIYAA 318
L+ N++ + +A
Sbjct: 416 KMLQENMTPNHVTFLAVLSA 435
>Medtr5g008690.1 | PPR containing plant-like protein | HC |
chr5:1878296-1873339 | 20130731
Length = 764
Score = 204 bits (520), Expect = 9e-53, Method: Compositional matrix adjust.
Identities = 101/306 (33%), Positives = 178/306 (58%), Gaps = 2/306 (0%)
Query: 41 TTMIDGYAKAGDMAAARFLFEQATEKDVVAWSALISGYVQNGQPNQALKVFLEMESKNVK 100
T+I Y++ D+ A LF + EK ++ W+A++SG+ + + + EM + V+
Sbjct: 367 NTLITMYSRCRDLNHAYLLFRKIDEKGLITWNAMLSGFAHMDRSEEVSFLLREMLREGVE 426
Query: 101 PDEFILVSLMSATSQLGHLELAQWVDSYVSKSSIDLQQDHVI-AALLDMNAKCGNMDRAL 159
P+ + S++ +++ +L+ + Y+ K + ++ +L++M ++ G + A
Sbjct: 427 PNYVTIASILPLCARIANLQHGKEFHCYMVKREEQFKGYLLLWNSLVEMYSRSGKVLEAR 486
Query: 160 KLFKEMPKRDLVSYCSMIQGLSIHGCGEDAVRLFNSMLMEGLVPDEVAFTIILTACSHSG 219
K+F + ++D V+Y SMI G + G GE A++LF M + PD V +L ACSHSG
Sbjct: 487 KVFDSLSRKDEVTYTSMIMGYGVSGDGETALKLFAEMRRLNIKPDHVTMVAVLIACSHSG 546
Query: 220 LVDEGWNYFQSMKQKYGISPSPDHFACMVDLLSRSGHLGDAYELMKSMH-EPHAGAWGAL 278
LV +G F+ M + YGI P +H++CMVDL R+G L A E++ M +P + W L
Sbjct: 547 LVAQGQVLFRKMIEVYGIDPRVEHYSCMVDLFGRAGLLDKAKEVITGMSCKPTSAIWATL 606
Query: 279 LGACKLHGDSDLGEIVANQLFELEPQNAANYILLSNIYAAAERWIDVSLVRSRMRERSVQ 338
+GACK+HG++ +GE A +L E++P ++ Y+L++N+YAAA R + R+ MR+ +
Sbjct: 607 IGACKIHGNTVIGEWAAGKLLEMKPDHSGYYLLIANMYAAANRLDKEAEARTYMRDSGAK 666
Query: 339 KIPGCS 344
+ PGC+
Sbjct: 667 RTPGCA 672
Score = 105 bits (263), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 72/285 (25%), Positives = 145/285 (50%), Gaps = 7/285 (2%)
Query: 10 NAMLCGFVKDGDLSSARGVFDAMPEKNVVSFTTMIDGYAKAGDMAAARFLF----EQATE 65
NA++ + + G L AR +FD MP ++ VS+ TMI YA G A LF E E
Sbjct: 232 NALVFMYGRFGKLEVARELFDIMPARDDVSWNTMISCYASRGLWDEAFRLFGCMREAGIE 291
Query: 66 KDVVAWSALISGYVQNGQPNQALKVFLEMESKNVKPDEFILVSLMSATSQLGHLELAQWV 125
++++ W+ + G + G ALK+F +M + ++ D +V ++A S +G ++L + +
Sbjct: 292 RNIIIWNTIAGGCLHTGNFKGALKLFSQMRAV-IQLDSVAMVVGLNACSHIGAVKLGKEI 350
Query: 126 DSYVSKSSIDLQQDHVIAALLDMNAKCGNMDRALKLFKEMPKRDLVSYCSMIQGLSIHGC 185
+ ++ D+ D+V L+ M ++C +++ A LF+++ ++ L+++ +M+ G +
Sbjct: 351 HGHAVRTCFDVF-DNVKNTLITMYSRCRDLNHAYLLFRKIDEKGLITWNAMLSGFAHMDR 409
Query: 186 GEDAVRLFNSMLMEGLVPDEVAFTIILTACSHSGLVDEGWNYFQSM-KQKYGISPSPDHF 244
E+ L ML EG+ P+ V IL C+ + G + M K++ +
Sbjct: 410 SEEVSFLLREMLREGVEPNYVTIASILPLCARIANLQHGKEFHCYMVKREEQFKGYLLLW 469
Query: 245 ACMVDLLSRSGHLGDAYELMKSMHEPHAGAWGALLGACKLHGDSD 289
+V++ SRSG + +A ++ S+ + +++ + GD +
Sbjct: 470 NSLVEMYSRSGKVLEARKVFDSLSRKDEVTYTSMIMGYGVSGDGE 514
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 67/235 (28%), Positives = 111/235 (47%), Gaps = 7/235 (2%)
Query: 34 EKNVVSFTTMIDGYAKAGDMAAARFLFEQATEKDVVAWSALISGYVQNGQPNQALKVFLE 93
+N + + +I+ YA +A A+ + E + D + W+ +IS YV+N A+ V+
Sbjct: 124 HQNPILVSKLINFYASVDLLADAQIVAECSNSFDPLHWNMVISLYVKNCLFEDAISVYRR 183
Query: 94 MESKNVKPDEFILVSLMSATSQLGHLELAQWVDSYVSKSSIDLQQDHVIAALLDMNAKCG 153
M SK V PD++ S++ A +L + V + +SSI V AL+ M + G
Sbjct: 184 MLSKGVIPDDYTYPSVLKACGELLDYDSGVAVHKAIQESSIKWSL-FVHNALVFMYGRFG 242
Query: 154 NMDRALKLFKEMPKRDLVSYCSMIQGLSIHGCGEDAVRLFNSMLMEGLVPDEVAFTIILT 213
++ A +LF MP RD VS+ +MI + G ++A RLF M G+ + + + I
Sbjct: 243 KLEVARELFDIMPARDDVSWNTMISCYASRGLWDEAFRLFGCMREAGIERNIIIWNTIAG 302
Query: 214 ACSHSGLVDEGWNYFQSMKQKYGISPSPDHFACMVDLLSRSGHLGDAYELMKSMH 268
C H+G F M+ + MV L+ H+G A +L K +H
Sbjct: 303 GCLHTGNFKGALKLFSQMRAVIQLDS-----VAMVVGLNACSHIG-AVKLGKEIH 351
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 40/147 (27%), Positives = 80/147 (54%), Gaps = 3/147 (2%)
Query: 40 FTTMIDGYAKAGDMAAARFLFEQATEKDVVAWSALISGYVQNGQPNQALKVFLEMESKNV 99
+ ++++ Y+++G + AR +F+ + KD V ++++I GY +G ALK+F EM N+
Sbjct: 469 WNSLVEMYSRSGKVLEARKVFDSLSRKDEVTYTSMIMGYGVSGDGETALKLFAEMRRLNI 528
Query: 100 KPDEFILVSLMSATSQLGHLELAQWV-DSYVSKSSIDLQQDHVIAALLDMNAKCGNMDRA 158
KPD +V+++ A S G + Q + + ID + +H + ++D+ + G +D+A
Sbjct: 529 KPDHVTMVAVLIACSHSGLVAQGQVLFRKMIEVYGIDPRVEHY-SCMVDLFGRAGLLDKA 587
Query: 159 LKLFKEMP-KRDLVSYCSMIQGLSIHG 184
++ M K + ++I IHG
Sbjct: 588 KEVITGMSCKPTSAIWATLIGACKIHG 614
>Medtr7g082690.1 | PPR containing plant-like protein | HC |
chr7:31706993-31708834 | 20130731
Length = 503
Score = 204 bits (519), Expect = 9e-53, Method: Compositional matrix adjust.
Identities = 108/306 (35%), Positives = 171/306 (55%), Gaps = 6/306 (1%)
Query: 42 TMIDGYAKAGDMAAARFLFEQATEKDVVAWSALISGYVQNGQPNQALKVFLEMESKNVKP 101
+++D Y K + F++ KDV +W+ + G +Q G+P AL V +M+ VKP
Sbjct: 199 SLVDMYLKNQKLEEGFKAFDEIPHKDVCSWTQMADGCLQWGEPRMALAVIAKMKKMGVKP 258
Query: 102 DEFILVSLMSATSQLGHLELAQWVDSYVSK--SSIDLQQDHVIAALLDMNAKCGNMDRAL 159
++F L + ++A + L +E + K S +D+ D+ ALLDM AKCG MD A
Sbjct: 259 NKFTLATALNACACLASMEEGKQFHGLRIKLGSDVDVCVDN---ALLDMYAKCGCMDSAW 315
Query: 160 KLFKEMPKRDLVSYCSMIQGLSIHGCGEDAVRLFNSMLMEGLVPDEVAFTIILTACSHSG 219
+F+ R +VS+ +MI + +G +A+++F+ M + P+ + F +L ACS G
Sbjct: 316 TVFRSTNSRSVVSWTTMIMACAQNGQPGEALQIFDEMKETSVEPNYITFICVLYACSQGG 375
Query: 220 LVDEGWNYFQSMKQKYGISPSPDHFACMVDLLSRSGHLGDAYELMKSM-HEPHAGAWGAL 278
VDEGW Y SM + YGI P DH+ CMV +L R+G + +A EL+ M P W L
Sbjct: 376 FVDEGWKYLSSMDKDYGIIPGEDHYICMVSILGRAGLIKEAKELILRMPFHPGVRVWQTL 435
Query: 279 LGACKLHGDSDLGEIVANQLFELEPQNAANYILLSNIYAAAERWIDVSLVRSRMRERSVQ 338
L AC++HGD + G++ A + + + ++Y+LLSN+ A W V +R M R+V+
Sbjct: 436 LSACQIHGDVETGKLAAEHAIKHDKNDPSSYVLLSNMLAETSNWDCVVSLRELMETRNVK 495
Query: 339 KIPGCS 344
K+PG S
Sbjct: 496 KVPGSS 501
Score = 95.9 bits (237), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 84/365 (23%), Positives = 154/365 (42%), Gaps = 54/365 (14%)
Query: 1 MPQRNVASWNAMLCGFVKDGDLSSARGVFDAMP--------------------------- 33
MP+RNV SW++++ G V +G S A +F M
Sbjct: 18 MPERNVVSWSSVMTGCVHNGGASDALSLFSCMHREGFVKPNEFTFVSALQACSLSENVTQ 77
Query: 34 -------------EKNVVSFTTMIDGYAKAGDMAAARFLFEQATEKDVVAWSALISGYVQ 80
E NV + + G + A +FE + +D V W+ ++ GY++
Sbjct: 78 AYQIYSLVVRSGLECNVFLLNAFLTALVRNGKLTEALQIFETSPIRDTVTWNTMMGGYLE 137
Query: 81 NGQPNQALKVFLE-MESKNVKPDEFILVSLMSATSQLGHLELAQWVDSYVSKSSIDLQQD 139
++ + VF M + VKPDEF S ++ + + L++ V + + +S D
Sbjct: 138 FS--SEQIPVFWRYMNREGVKPDEFTFASALTGLATISSLKMGMQVHAQLVRSGYG--DD 193
Query: 140 HVIA-ALLDMNAKCGNMDRALKLFKEMPKRDLVSYCSMIQGLSIHGCGEDAVRLFNSMLM 198
+ +L+DM K ++ K F E+P +D+ S+ M G G A+ + M
Sbjct: 194 ICVGNSLVDMYLKNQKLEEGFKAFDEIPHKDVCSWTQMADGCLQWGEPRMALAVIAKMKK 253
Query: 199 EGLVPDEVAFTIILTACSHSGLVDEGWNYFQSMKQKYGISPSPDHFACMVDLLSRSGHLG 258
G+ P++ L AC+ ++EG F ++ K G ++D+ ++ G +
Sbjct: 254 MGVKPNKFTLATALNACACLASMEEG-KQFHGLRIKLGSDVDVCVDNALLDMYAKCGCMD 312
Query: 259 DAYELMKSMHEPHAGAWGALLGACKLHGDSDLGEIVANQLFE--LEPQNAANYI-LLSNI 315
A+ + +S + +W ++ AC +G GE A Q+F+ E NYI + +
Sbjct: 313 SAWTVFRSTNSRSVVSWTTMIMACAQNGQP--GE--ALQIFDEMKETSVEPNYITFICVL 368
Query: 316 YAAAE 320
YA ++
Sbjct: 369 YACSQ 373
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 64/243 (26%), Positives = 117/243 (48%), Gaps = 6/243 (2%)
Query: 47 YAKAGDMAAARFLFEQATEKDVVAWSALISGYVQNGQPNQALKVFLEMESKN-VKPDEFI 105
Y K D+ +A LF++ E++VV+WS++++G V NG + AL +F M + VKP+EF
Sbjct: 2 YIKCKDLTSALQLFDEMPERNVVSWSSVMTGCVHNGGASDALSLFSCMHREGFVKPNEFT 61
Query: 106 LVSLMSATSQLGHLELAQWVDSYVSKSSIDLQQDHVIAALLDMNAKCGNMDRALKLFKEM 165
VS + A S ++ A + S V +S ++ ++ A L + G + AL++F+
Sbjct: 62 FVSALQACSLSENVTQAYQIYSLVVRSGLECNV-FLLNAFLTALVRNGKLTEALQIFETS 120
Query: 166 PKRDLVSYCSMIQGLSIHGCGEDAVRLFNSMLMEGLVPDEVAFTIILTACSHSGLVDEGW 225
P RD V++ +M+ G + E + M EG+ PDE F LT + + G
Sbjct: 121 PIRDTVTWNTMMGGY-LEFSSEQIPVFWRYMNREGVKPDEFTFASALTGLATISSLKMGM 179
Query: 226 N-YFQSMKQKYGISPSPDHFACMVDLLSRSGHLGDAYELMKSMHEPHAGAWGALLGACKL 284
+ Q ++ YG + +VD+ ++ L + ++ + +W + C
Sbjct: 180 QVHAQLVRSGYGDDICVGN--SLVDMYLKNQKLEEGFKAFDEIPHKDVCSWTQMADGCLQ 237
Query: 285 HGD 287
G+
Sbjct: 238 WGE 240
Score = 68.9 bits (167), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 42/135 (31%), Positives = 71/135 (52%), Gaps = 2/135 (1%)
Query: 148 MNAKCGNMDRALKLFKEMPKRDLVSYCSMIQGLSIHGCGEDAVRLFNSMLMEGLV-PDEV 206
M KC ++ AL+LF EMP+R++VS+ S++ G +G DA+ LF+ M EG V P+E
Sbjct: 1 MYIKCKDLTSALQLFDEMPERNVVSWSSVMTGCVHNGGASDALSLFSCMHREGFVKPNEF 60
Query: 207 AFTIILTACSHSGLVDEGWNYFQSMKQKYGISPSPDHFACMVDLLSRSGHLGDAYELMKS 266
F L ACS S V + + + S+ + G+ + + L R+G L +A ++ ++
Sbjct: 61 TFVSALQACSLSENVTQAYQIY-SLVVRSGLECNVFLLNAFLTALVRNGKLTEALQIFET 119
Query: 267 MHEPHAGAWGALLGA 281
W ++G
Sbjct: 120 SPIRDTVTWNTMMGG 134
>Medtr4g073930.1 | PPR containing plant-like protein | HC |
chr4:28099513-28096632 | 20130731
Length = 597
Score = 204 bits (519), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 116/330 (35%), Positives = 192/330 (58%), Gaps = 9/330 (2%)
Query: 15 GFVKDGDLSSARGVFDAMPEKNVVSFTTMIDGYAKAGDMAAARFLFEQATEKDVVAWSAL 74
+ K G + A +FD M +++ ++TT++ GYA GDM +A +F Q +K+ +W+AL
Sbjct: 222 AYAKCGKMEDAMRLFDDMTVRDIPAWTTLVSGYALCGDMDSAAEMFSQMPKKNTYSWTAL 281
Query: 75 ISGYVQNGQPNQALKVFLEMESKNVKPDEFILVSLMSATSQLGHLELAQWVDSYVSKSSI 134
I GY +NG ++AL VF +M V+PDEF S + A + + L+ + + +++ +++I
Sbjct: 282 IGGYARNGMAHKALGVFRKMIMHRVRPDEFTFSSCLFACATIASLKHGKQIHAFLLRNNI 341
Query: 135 DLQQDHVIAALLDMNAKCGNMDRALKLFKEMPK-RDLVSYCSMIQGLSIHGCGEDAVRLF 193
V++A++DM AKCG+M+ A ++F +D+V + +MI L+ +G G++AV +
Sbjct: 342 R-PNPVVVSAVVDMYAKCGSMETARRIFNFTEHMQDVVLWNTMISALAHYGYGKEAVLML 400
Query: 194 NSMLMEGLVPDEVAFTIILTACSHSGLVDEGWNYFQSMKQKYGISPSPDHFACMVDLLSR 253
N ML G+ P+ IL ACSHSGLV +G +F+SM +G+ P +H+A ++DLL R
Sbjct: 401 NDMLKSGVKPNRNTLVAILNACSHSGLVCDGLQFFKSMTNDHGVIPDLEHYAHLIDLLGR 460
Query: 254 SGHLGDAYELMKSMH----EPHAGAWGALLGACKLHGDSDLGEIVANQLFELEPQNAANY 309
+G E MK + +P +LL C+ +G +G VA L + +P ++A Y
Sbjct: 461 AGCF---VESMKDLFMIDCKPGDHVLYSLLCVCRPNGSIGVGREVAEFLIKWQPHSSAAY 517
Query: 310 ILLSNIYAAAERWIDVSLVRSRMRERSVQK 339
LLS+IYAA W V R M ER +++
Sbjct: 518 GLLSSIYAALVTWGLVDEARHIMDERRLRQ 547
Score = 123 bits (308), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 82/312 (26%), Positives = 144/312 (46%), Gaps = 32/312 (10%)
Query: 20 GDLSSARGVFDAMPEKNVVSFTTMIDGYAKAGDMAAARFLFEQATEKDVVAWSALISGYV 79
GD AR VFD M +N+ S+ MI GY K G M AR +F + EKD V+W+A++ GY
Sbjct: 95 GDYVRARKVFDKMDVRNLYSWNNMISGYVKLGMMKQARGVFYKMPEKDCVSWNAMVVGYA 154
Query: 80 QNGQPNQALKVFLEMESKNVKPDEFILVSLMSATSQLGHLELAQWV-------------- 125
G+ ++AL+ + M V +EF S++ +L EL + +
Sbjct: 155 HCGRFSEALRFYGWMRRVCVGYNEFTFASVLIVCVKLKEFELCRQIHGQVVVVGFLSNVV 214
Query: 126 ------DSYVS----KSSIDLQQDHVI------AALLDMNAKCGNMDRALKLFKEMPKRD 169
D+Y + ++ L D + L+ A CG+MD A ++F +MPK++
Sbjct: 215 VSSSIVDAYAKCGKMEDAMRLFDDMTVRDIPAWTTLVSGYALCGDMDSAAEMFSQMPKKN 274
Query: 170 LVSYCSMIQGLSIHGCGEDAVRLFNSMLMEGLVPDEVAFTIILTACSHSGLVDEGWNYFQ 229
S+ ++I G + +G A+ +F M+M + PDE F+ L AC+ + G
Sbjct: 275 TYSWTALIGGYARNGMAHKALGVFRKMIMHRVRPDEFTFSSCLFACATIASLKHG-KQIH 333
Query: 230 SMKQKYGISPSPDHFACMVDLLSRSGHLGDAYELMK-SMHEPHAGAWGALLGACKLHGDS 288
+ + I P+P + +VD+ ++ G + A + + H W ++ A +G
Sbjct: 334 AFLLRNNIRPNPVVVSAVVDMYAKCGSMETARRIFNFTEHMQDVVLWNTMISALAHYGYG 393
Query: 289 DLGEIVANQLFE 300
++ N + +
Sbjct: 394 KEAVLMLNDMLK 405
>Medtr7g079860.1 | pentatricopeptide (PPR) repeat protein | HC |
chr7:30342642-30345393 | 20130731
Length = 755
Score = 202 bits (514), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 108/322 (33%), Positives = 189/322 (58%), Gaps = 20/322 (6%)
Query: 41 TTMIDGYAKAGDMAAARFLFE----------------QATEKDVVAWSALISGYVQNGQP 84
+++++ Y K G M A + + + + +V+WS+++SGYV NG+
Sbjct: 305 SSLVEMYGKCGRMDKASTILKDVPLNFLRKGNFGVTCKEPKARMVSWSSMVSGYVWNGKY 364
Query: 85 NQALKVFLEMESKNVKPDEFILVSLMSATSQLGHLELAQWVDSYVSKSSIDLQQD-HVIA 143
+K F M + + D + +++SA + G LE + + +Y+ K I L+ D +V +
Sbjct: 365 EDGMKTFRSMVCELIVVDIRTVATIISACANAGILEFGKQIHAYIQK--IGLRIDAYVGS 422
Query: 144 ALLDMNAKCGNMDRALKLFKEMPKRDLVSYCSMIQGLSIHGCGEDAVRLFNSMLMEGLVP 203
+L+DM +K G++D AL +F+++ + ++V + SMI G ++HG G++A+ LF ML G++P
Sbjct: 423 SLIDMYSKSGSLDDALMIFEQIKEPNVVLWTSMISGCALHGQGKEAISLFEGMLNLGIIP 482
Query: 204 DEVAFTIILTACSHSGLVDEGWNYFQSMKQKYGISPSPDHFACMVDLLSRSGHLGDAYEL 263
+EV F +L ACSH GL++EG YF+ MK Y I+P +H+ MV+L R+GHL +A
Sbjct: 483 NEVTFVGVLNACSHVGLIEEGCRYFRMMKDTYHINPEVEHYTSMVNLYGRAGHLIEAKNF 542
Query: 264 MKSMHEPH-AGAWGALLGACKLHGDSDLGEIVANQLFELEPQNAANYILLSNIYAAAERW 322
+ H W + L +C+LH + ++G+ V+ L + P + YILLSN+ ++ +W
Sbjct: 543 IFENSISHFTSVWRSFLSSCRLHKNFNMGKSVSEMLLQSAPSDPDAYILLSNMCSSNHQW 602
Query: 323 IDVSLVRSRMRERSVQKIPGCS 344
+ ++VRS M +R V+K PG S
Sbjct: 603 DEAAIVRSLMYQRGVKKQPGQS 624
Score = 127 bits (318), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 80/293 (27%), Positives = 146/293 (49%), Gaps = 18/293 (6%)
Query: 10 NAMLCGFVKDGDLSSARGVFDAMPEKNVVSFTTMIDGYAKAGDMAAARFLFEQATEKDVV 69
N++L ++K + A F+ M EK+VVS+ MI Y + GD+ + +F KDVV
Sbjct: 173 NSILDLYLKCKEFEYAESFFELMIEKDVVSWNIMIGAYLREGDVEKSLEMFRNFPNKDVV 232
Query: 70 AWSALISGYVQNGQPNQALKVFLEMESKNVKPDEFILVSLMSATSQLGHLELAQWVDSYV 129
+W+ +I G +Q G AL+ M + + + S L +E+ + + V
Sbjct: 233 SWNTIIDGLIQCGYERLALEQLYCMVAHGTEFSPVTFSIALILVSSLSLVEVGRQLHGRV 292
Query: 130 SKSSIDLQQDHVIAALLDMNAKCGNMDRALKLFKEM----------------PKRDLVSY 173
++ ++ ++L++M KCG MD+A + K++ PK +VS+
Sbjct: 293 LTFGLN-SDGYIRSSLVEMYGKCGRMDKASTILKDVPLNFLRKGNFGVTCKEPKARMVSW 351
Query: 174 CSMIQGLSIHGCGEDAVRLFNSMLMEGLVPDEVAFTIILTACSHSGLVDEGWNYFQSMKQ 233
SM+ G +G ED ++ F SM+ E +V D I++AC+++G+++ G + Q
Sbjct: 352 SSMVSGYVWNGKYEDGMKTFRSMVCELIVVDIRTVATIISACANAGILEFG-KQIHAYIQ 410
Query: 234 KYGISPSPDHFACMVDLLSRSGHLGDAYELMKSMHEPHAGAWGALLGACKLHG 286
K G+ + ++D+ S+SG L DA + + + EP+ W +++ C LHG
Sbjct: 411 KIGLRIDAYVGSSLIDMYSKSGSLDDALMIFEQIKEPNVVLWTSMISGCALHG 463
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 53/252 (21%), Positives = 114/252 (45%), Gaps = 36/252 (14%)
Query: 47 YAKAGDMAAARFLFEQATEKDVVAWSALISGYVQ-NGQPNQALKVFLEMESKNVKPDEFI 105
Y K+ ++ A LF++ T K+ W+ LISG+ + G +F EM++ P+++
Sbjct: 77 YVKSSNLDHAHKLFDEITHKNTQTWTILISGFARAAGSSELVFSLFREMQADGACPNQYT 136
Query: 106 LVSLMSATSQLGHLELAQWVDSYVSKSSIDLQQDHVIA-ALLDMNAKC------------ 152
L S++ S+ +++ + + +++ ++ + D V+ ++LD+ KC
Sbjct: 137 LSSVLKCCSRENNIQFGKGIHAWILRNGVG--GDVVLENSILDLYLKCKEFEYAESFFEL 194
Query: 153 -------------------GNMDRALKLFKEMPKRDLVSYCSMIQGLSIHGCGEDAVRLF 193
G+++++L++F+ P +D+VS+ ++I GL G A+
Sbjct: 195 MIEKDVVSWNIMIGAYLREGDVEKSLEMFRNFPNKDVVSWNTIIDGLIQCGYERLALEQL 254
Query: 194 NSMLMEGLVPDEVAFTIILTACSHSGLVDEGWNYFQSMKQKYGISPSPDHFACMVDLLSR 253
M+ G V F+I L S LV+ G +G++ + +V++ +
Sbjct: 255 YCMVAHGTEFSPVTFSIALILVSSLSLVEVG-RQLHGRVLTFGLNSDGYIRSSLVEMYGK 313
Query: 254 SGHLGDAYELMK 265
G + A ++K
Sbjct: 314 CGRMDKASTILK 325
>Medtr7g113540.1 | PPR containing plant-like protein | HC |
chr7:46789868-46787166 | 20130731
Length = 650
Score = 202 bits (514), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 105/306 (34%), Positives = 186/306 (60%), Gaps = 4/306 (1%)
Query: 41 TTMIDGYAKAGDMAAARFLFEQATEKDVVAWSALISGYVQNGQPNQALKVFLEMESKNVK 100
+ ++D Y+K G + AA +FE A E D V+ + ++ + QNG +A+++F +M + ++
Sbjct: 290 SALMDLYSKCGSLDAAWQIFESAEELDGVSLTVILVAFAQNGFEEEAIQIFTKMVALGME 349
Query: 101 PDEFILVSLMSATSQLGHLELAQWVDSYVSKSSIDLQQDHVIAALLDMNAKCGNMDRALK 160
D ++ +++ +L L + + S + K + + V L++M +KCG++ +L
Sbjct: 350 VDANMVSAVLGVFGVGTYLALGKQIHSLIIKKNF-CENPFVGNGLVNMYSKCGDLSDSLL 408
Query: 161 LFKEMPKRDLVSYCSMIQGLSIHGCGEDAVRLFNSMLMEGLVPDEVAFTIILTACSHSGL 220
+F +M +++ VS+ S+I + HG G A++ + M +EG+ P +V F +L ACSH+GL
Sbjct: 409 VFYQMTQKNSVSWNSVIAAFARHGDGFKALQFYEEMRVEGVAPTDVTFLSLLHACSHAGL 468
Query: 221 VDEGWNYFQSMKQKYGISPSPDHFACMVDLLSRSGHLGDAYELMKSMHEPHAG--AWGAL 278
V++G +SM +GISP +H+AC+VD+L R+GHL +A + ++ + E H G W AL
Sbjct: 469 VEKGMELLESMTNDHGISPRSEHYACVVDMLGRAGHLNEAKKFIEGLPE-HGGVLVWQAL 527
Query: 279 LGACKLHGDSDLGEIVANQLFELEPQNAANYILLSNIYAAAERWIDVSLVRSRMRERSVQ 338
LGAC +HGDS++G+ A++LF P + A Y+L++NIY++ W + + RM+E V
Sbjct: 528 LGACSIHGDSEMGKYAADRLFSAAPASPAPYVLMANIYSSEGNWKERASSIKRMKEMGVA 587
Query: 339 KIPGCS 344
K G S
Sbjct: 588 KEVGIS 593
Score = 108 bits (270), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 84/334 (25%), Positives = 151/334 (45%), Gaps = 50/334 (14%)
Query: 1 MPQRNVASWNAMLCGFVKDGDLSSARGVFDAMPEKNVV-------SFTTMIDG------- 46
MP R+ SWN M+ GF+++GD ++ F M E N V + TTM+ G
Sbjct: 103 MPVRDTVSWNTMISGFLRNGDFDTSFKFFKQMTESNRVCCRFDKATLTTMLSGCDGLRLG 162
Query: 47 -------------------------------YAKAGDMAAARFLFEQATEKDVVAWSALI 75
Y K + R +F++ E++VV W+A+I
Sbjct: 163 ISTSVTQMIHGLVFVGGFEREITVGNALITSYFKCECFSQGRKVFDEMIERNVVTWTAVI 222
Query: 76 SGYVQNGQPNQALKVFLEME-SKNVKPDEFILVSLMSATSQLGHLELAQWVDSYVSKSSI 134
SG QN +L++F +M +V P+ +S + A S L L Q + + K +
Sbjct: 223 SGLAQNEFYEDSLRLFAQMRCCGSVSPNVLTYLSSLMACSGLQVLRDGQKIHGLLWK--L 280
Query: 135 DLQQDHVI-AALLDMNAKCGNMDRALKLFKEMPKRDLVSYCSMIQGLSIHGCGEDAVRLF 193
+Q D I +AL+D+ +KCG++D A ++F+ + D VS ++ + +G E+A+++F
Sbjct: 281 GMQSDLCIESALMDLYSKCGSLDAAWQIFESAEELDGVSLTVILVAFAQNGFEEEAIQIF 340
Query: 194 NSMLMEGLVPDEVAFTIILTACSHSGLVDEGWNYFQSMKQKYGISPSPDHFACMVDLLSR 253
M+ G+ D + +L + G S+ K +P +V++ S+
Sbjct: 341 TKMVALGMEVDANMVSAVLGVFGVGTYLALG-KQIHSLIIKKNFCENPFVGNGLVNMYSK 399
Query: 254 SGHLGDAYELMKSMHEPHAGAWGALLGACKLHGD 287
G L D+ + M + ++ +W +++ A HGD
Sbjct: 400 CGDLSDSLLVFYQMTQKNSVSWNSVIAAFARHGD 433
Score = 83.2 bits (204), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 64/248 (25%), Positives = 124/248 (50%), Gaps = 9/248 (3%)
Query: 29 FDAMPEKNVVSFTTMIDGYAKAGDMAAARFLFEQATEKDVVAWSALISGYVQNGQPNQAL 88
FD + + +++ Y+K G+ A +F+ +D V+W+ +ISG+++NG + +
Sbjct: 69 FDGSQRNALFIWNSLLSMYSKCGEFRNAGNVFDYMPVRDTVSWNTMISGFLRNGDFDTSF 128
Query: 89 KVFLEMESKN---VKPDEFILVSLMSATS--QLG-HLELAQWVDSYVSKSSIDLQQDHVI 142
K F +M N + D+ L +++S +LG + Q + V + ++ V
Sbjct: 129 KFFKQMTESNRVCCRFDKATLTTMLSGCDGLRLGISTSVTQMIHGLVFVGGFE-REITVG 187
Query: 143 AALLDMNAKCGNMDRALKLFKEMPKRDLVSYCSMIQGLSIHGCGEDAVRLFNSMLMEGLV 202
AL+ KC + K+F EM +R++V++ ++I GL+ + ED++RLF M G V
Sbjct: 188 NALITSYFKCECFSQGRKVFDEMIERNVVTWTAVISGLAQNEFYEDSLRLFAQMRCCGSV 247
Query: 203 -PDEVAFTIILTACSHSGLVDEGWNYFQSMKQKYGISPSPDHFACMVDLLSRSGHLGDAY 261
P+ + + L ACS ++ +G + K G+ + ++DL S+ G L A+
Sbjct: 248 SPNVLTYLSSLMACSGLQVLRDG-QKIHGLLWKLGMQSDLCIESALMDLYSKCGSLDAAW 306
Query: 262 ELMKSMHE 269
++ +S E
Sbjct: 307 QIFESAEE 314
>Medtr5g094220.1 | PPR containing plant-like protein | HC |
chr5:41149037-41146758 | 20130731
Length = 759
Score = 202 bits (514), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 106/309 (34%), Positives = 180/309 (58%), Gaps = 4/309 (1%)
Query: 28 VFDAMPEKNVVSFTTMIDGYAKAGDMAAARFLFEQATEKDVVAWSALISGYVQNGQPNQA 87
V ++ + ++I+ Y K M + +F + +E+DV+ W+ALIS ++ +A
Sbjct: 442 VIKGFVDETISVTNSLIEMYGKCDKMNVSWRIFNR-SERDVILWNALISAHIHVKHYEEA 500
Query: 88 LKVFLEMESKNVKPDEFILVSLMSATSQLGHLELAQWVDSYVSKSSIDLQQDHVIAALLD 147
+ +F M ++ P+ LV ++SA S L LE + + Y+++ L + AL+D
Sbjct: 501 ISLFDIMIMEDQNPNTATLVVVLSACSHLAFLEKGERLHRYINEKGFKLNLP-LGTALVD 559
Query: 148 MNAKCGNMDRALKLFKEMPKRDLVSYCSMIQGLSIHGCGEDAVRLFNSMLMEGLVPDEVA 207
M AKCG ++++ ++F M ++D++ + +MI G ++G E A+ +FN M + P+E+
Sbjct: 560 MYAKCGQLEKSREVFDSMMEKDVICWNAMISGYGMNGYAESAIEIFNLMEESNVKPNEIT 619
Query: 208 FTIILTACSHSGLVDEGWNYFQSMKQKYGISPSPDHFACMVDLLSRSGHLGDAYELMKSM 267
F +L+AC+H+GLV+EG N F M Q Y + P+ H+ CMVDLL RS +L +A EL+ SM
Sbjct: 620 FLSLLSACAHAGLVEEGKNVFAKM-QSYSVKPNLKHYTCMVDLLGRSCNLEEAEELVLSM 678
Query: 268 H-EPHAGAWGALLGACKLHGDSDLGEIVANQLFELEPQNAANYILLSNIYAAAERWIDVS 326
P G WGALL ACK H ++G + + EP+N YI+++N+Y++ RW +
Sbjct: 679 PIPPDGGVWGALLSACKTHNQIEMGIRIGKNAIDSEPENDGYYIMVANMYSSIGRWDEAE 738
Query: 327 LVRSRMRER 335
VR M++R
Sbjct: 739 NVRRTMKDR 747
Score = 99.0 bits (245), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 61/249 (24%), Positives = 130/249 (52%), Gaps = 4/249 (1%)
Query: 41 TTMIDGYAKAGDMAAARFLFEQATEKDVVAWSALISGYVQNGQPNQALKVFLEMESKNVK 100
+++ Y K G ++ A LF Q ++ + W+ +I GY + G+ + +++F EM+ ++
Sbjct: 355 NSLLSMYCKFGMLSFAERLF-QRSQGSIEYWNFMIVGYGRIGKNVKCIQLFREMQYLGIR 413
Query: 101 PDEFILVSLMSATSQLGHLELAQWVDSYVSKSSIDLQQDHVIAALLDMNAKCGNMDRALK 160
+ +VS +++ QLG + L + + V K +D + V +L++M KC M+ + +
Sbjct: 414 SESVGIVSAIASCGQLGEINLGRSIHCNVIKGFVD-ETISVTNSLIEMYGKCDKMNVSWR 472
Query: 161 LFKEMPKRDLVSYCSMIQGLSIHGCGEDAVRLFNSMLMEGLVPDEVAFTIILTACSHSGL 220
+F +RD++ + ++I E+A+ LF+ M+ME P+ ++L+ACSH
Sbjct: 473 IFNR-SERDVILWNALISAHIHVKHYEEAISLFDIMIMEDQNPNTATLVVVLSACSHLAF 531
Query: 221 VDEGWNYFQSMKQKYGISPSPDHFACMVDLLSRSGHLGDAYELMKSMHEPHAGAWGALLG 280
+++G + + +K G + +VD+ ++ G L + E+ SM E W A++
Sbjct: 532 LEKGERLHRYINEK-GFKLNLPLGTALVDMYAKCGQLEKSREVFDSMMEKDVICWNAMIS 590
Query: 281 ACKLHGDSD 289
++G ++
Sbjct: 591 GYGMNGYAE 599
Score = 86.3 bits (212), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 60/189 (31%), Positives = 95/189 (50%), Gaps = 5/189 (2%)
Query: 33 PEKNVVSFTTMIDGYAKAGDMAAARFLFEQATEKDVVAWSALISGYVQNGQPNQALKVFL 92
PE + V ++ + Y++ +M A +F++ +DVVAW+AL+ GYVQNG+ L+
Sbjct: 143 PENSAVG-SSFVSLYSRCDEMNDAVKVFDEIPVRDVVAWTALVIGYVQNGESEMGLECIS 201
Query: 93 EMES---KNVKPDEFILVSLMSATSQLGHLELAQWVDSYVSKSSIDLQQDHVIAALLDMN 149
EM + KP+ L A LG L + + V K+ I D + +++L M
Sbjct: 202 EMYRVGDDSQKPNARTLEGGFLACGNLGDLVSGRCLHGLVVKNGIGCLLD-IQSSVLSMY 260
Query: 150 AKCGNMDRALKLFKEMPKRDLVSYCSMIQGLSIHGCGEDAVRLFNSMLMEGLVPDEVAFT 209
KCG A + F E+ +DL+S+ SMI+ + G D VR F ML + PD +
Sbjct: 261 CKCGVPREAYQSFSEVINKDLLSWTSMIRVYARFGMMSDCVRFFWEMLENQVCPDGMVIG 320
Query: 210 IILTACSHS 218
IL+ +S
Sbjct: 321 CILSGFGNS 329
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 54/231 (23%), Positives = 99/231 (42%), Gaps = 34/231 (14%)
Query: 5 NVASWNAMLCGFVKDGDLSSARGVFDAMPEKNVVSFTTMIDGYAKAGDMAAARFLFEQAT 64
N+ A++ + K G L +R VFD+M EK+V+ + MI GY
Sbjct: 550 NLPLGTALVDMYAKCGQLEKSREVFDSMMEKDVICWNAMISGYG---------------- 593
Query: 65 EKDVVAWSALISGYVQNGQPNQALKVFLEMESKNVKPDEFILVSLMSATSQLGHLELAQW 124
NG A+++F ME NVKP+E +SL+SA + G +E +
Sbjct: 594 ---------------MNGYAESAIEIFNLMEESNVKPNEITFLSLLSACAHAGLVEEGKN 638
Query: 125 VDSYVSKSSIDLQQDHVIAALLDMNAKCGNMDRALKLFKEMP-KRDLVSYCSMIQGLSIH 183
V + + S+ H ++D+ + N++ A +L MP D + +++ H
Sbjct: 639 VFAKMQSYSVKPNLKHY-TCMVDLLGRSCNLEEAEELVLSMPIPPDGGVWGALLSACKTH 697
Query: 184 GCGEDAVRLFNSMLMEGLVPDEVAFTIILTACSHSGLVDEGWNYFQSMKQK 234
E +R+ + + + ++ + ++ S G DE N ++MK +
Sbjct: 698 NQIEMGIRIGKNAI-DSEPENDGYYIMVANMYSSIGRWDEAENVRRTMKDR 747
Score = 52.4 bits (124), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 33/158 (20%), Positives = 68/158 (43%)
Query: 43 MIDGYAKAGDMAAARFLFEQATEKDVVAWSALISGYVQNGQPNQALKVFLEMESKNVKPD 102
+I Y ++ LF KD W++ + Q L + M S+NV P+
Sbjct: 50 LISLYDTLNHPTSSSTLFHSLPFKDTFLWNSFLKTLFSRSLYPQFLSFYSLMRSENVLPN 109
Query: 103 EFILVSLMSATSQLGHLELAQWVDSYVSKSSIDLQQDHVIAALLDMNAKCGNMDRALKLF 162
F + S+ + + + + K + V ++ + + ++C M+ A+K+F
Sbjct: 110 HFTFPMVASSYAHFMMIRSGMNLHALACKVGFFPENSAVGSSFVSLYSRCDEMNDAVKVF 169
Query: 163 KEMPKRDLVSYCSMIQGLSIHGCGEDAVRLFNSMLMEG 200
E+P RD+V++ +++ G +G E + + M G
Sbjct: 170 DEIPVRDVVAWTALVIGYVQNGESEMGLECISEMYRVG 207
>Medtr3g063220.1 | PPR containing plant-like protein | HC |
chr3:28610294-28607607 | 20130731
Length = 546
Score = 202 bits (513), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 116/327 (35%), Positives = 185/327 (56%), Gaps = 28/327 (8%)
Query: 14 CGFVKDGDLSSARGVFDAMPEKNVVSFTTMIDGYAKAGDMAAARFLFEQATEKDVVAWSA 73
CGF DG + +A ++D Y+K GD+ AR +F + +D V+W++
Sbjct: 243 CGFWDDGFVLNA-----------------LVDMYSKCGDIVKARKIFNKMHFRDSVSWNS 285
Query: 74 LISGYVQNGQPNQALKVFLEMESKNVKPDEFILVSLMSATSQLG-HLELAQWVDSYVSKS 132
+++GYV++G +A+ +F +M K KPD F + +++++ S L +++ WV +
Sbjct: 286 MLTGYVRHGLEVEAINIFRQMVLKGEKPDYFSISAILTSVSSLDVGVQIHGWVIRQGVEW 345
Query: 133 SIDLQQDHVIAALLDMNAKCGNMDRALKLFKEMPKRDLVSYCSMIQGLSIHGCGEDAVRL 192
++ + +IA +K G +D+A +F MP+RD+VS+ S+I S H +A+
Sbjct: 346 NLSIANSLIIAY-----SKHGRLDKARSIFNLMPERDVVSWNSII---SSHCKHPEAISY 397
Query: 193 FNSMLMEGLVPDEVAFTIILTACSHSGLVDEGWNYFQSMKQKYGISPSPDHFACMVDLLS 252
F M G VPD++ F +L+AC+H GLV++G F M +KY I P +H+ CMV+L
Sbjct: 398 FEKMEEAGEVPDKITFVSLLSACAHLGLVNDGERLFALMCEKYKIKPIMEHYGCMVNLYG 457
Query: 253 RSGHLGDAYELMKSMHEPHAGA--WGALLGACKLHGDSDLGEIVANQLFELEPQNAANYI 310
R+G + AY ++ M G WGALL AC LHG+ +GEI AN+LFELEP N N++
Sbjct: 458 RAGLVEKAYSIIVRMDSEAVGPTLWGALLYACLLHGNVTIGEISANKLFELEPDNEHNFV 517
Query: 311 LLSNIYAAAERWIDVSLVRSRMRERSV 337
LL IY A R D+ +R M +R +
Sbjct: 518 LLMKIYEKAGRLEDMERIRMMMVDRGL 544
Score = 115 bits (287), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 77/263 (29%), Positives = 137/263 (52%), Gaps = 12/263 (4%)
Query: 26 RGVFDAMPEKNVVSFTTMIDGYAKAGDMAAARFLFEQATEKDVVA--WSALISGYVQNGQ 83
R + A+ +NV + ++ YA G M A LF+Q T++D+ A W++LISGY + G
Sbjct: 135 RLIPPALLHRNVGISSKLVRLYASFGYMDDAHDLFDQMTKRDMYAFPWNSLISGYAEMGL 194
Query: 84 PNQALKVFLEMESKNVKPDEFILVSLMSATSQLGHLELAQWVDSYVSKSSIDLQQDHVIA 143
+ A+ ++ +M + V+PD F ++ +G + + + V +V + V+
Sbjct: 195 YDDAIALYFQMVEEGVEPDIFTFPRVLKVCGGIGLVGVGEEVHRHVVRCGF-WDDGFVLN 253
Query: 144 ALLDMNAKCGNMDRALKLFKEMPKRDLVSYCSMIQGLSIHGCGEDAVRLFNSMLMEGLVP 203
AL+DM +KCG++ +A K+F +M RD VS+ SM+ G HG +A+ +F M+++G P
Sbjct: 254 ALVDMYSKCGDIVKARKIFNKMHFRDSVSWNSMLTGYVRHGLEVEAINIFRQMVLKGEKP 313
Query: 204 DEVAFTIILTACSH--SGLVDEGWNYFQSMKQKYGISPSPDHFACMVDLLSRSGHLGDAY 261
D + + ILT+ S G+ GW Q ++ I+ S ++ S+ G L A
Sbjct: 314 DYFSISAILTSVSSLDVGVQIHGWVIRQGVEWNLSIANS------LIIAYSKHGRLDKAR 367
Query: 262 ELMKSMHEPHAGAWGALLGA-CK 283
+ M E +W +++ + CK
Sbjct: 368 SIFNLMPERDVVSWNSIISSHCK 390
>Medtr4g068900.1 | PPR containing plant-like protein | HC |
chr4:25858642-25860684 | 20130731
Length = 680
Score = 201 bits (511), Expect = 8e-52, Method: Compositional matrix adjust.
Identities = 104/333 (31%), Positives = 192/333 (57%), Gaps = 6/333 (1%)
Query: 16 FVKDGDLSSARGVFDAMPEKNVVSFTTMIDGYAKAGDMAAARFLFEQATEKDVVAWSALI 75
+ K G++ A V+ + K+ + +++I GY+ G+M A+ LF+ E++ V W+AL
Sbjct: 306 YCKCGNIRYAELVYAGIGIKSQFAVSSLIVGYSSQGEMMKAQRLFDSLLERNSVVWTALC 365
Query: 76 SGYVQNGQPNQALKVFLEMESKN-VKPDEFILVSLMSATSQLGHLELAQWVDSYVSKSSI 134
SGY ++ Q + K+F + ++ + PD I++ ++ A + L L + + +Y+ + +
Sbjct: 366 SGYAKSQQCEEVFKLFRKFVTREELIPDAMIIIRVLGACATQATLSLGKQIHTYILRMRL 425
Query: 135 DLQQDHVIAALLDMNAKCGNMDRALKLFKEMPKRD--LVSYCSMIQGLSIHGCGEDAVRL 192
+ + +++A++DM +KCGN+ A K F+ M RD ++ Y MI G + HG A++L
Sbjct: 426 KMDKK-LLSAMVDMYSKCGNIMYAEKSFQLMTDRDRDVILYNVMIAGYAHHGFENKAIQL 484
Query: 193 FNSMLMEGLVPDEVAFTIILTACSHSGLVDEGWNYFQSMKQKYGISPSPDHFACMVDLLS 252
F+ ML + + PD V F +L+AC H GLV++G +F SM + Y + P +H+ACMVD+
Sbjct: 485 FHDMLKKNVKPDAVTFVALLSACRHRGLVEQGEIFFISM-EDYSVLPEINHYACMVDMYG 543
Query: 253 RSGHLGDAYELMKSMH-EPHAGAWGALLGACKLHGDSDLGEIVANQLFELEPQNAANYIL 311
R+ L A E M+ + + A WGA L AC+++ ++ L +L ++ + +
Sbjct: 544 RANQLEKALEFMRKIPIQIDATIWGAFLNACQINNNTSLVNKAEEELLKIGADTGSRCVQ 603
Query: 312 LSNIYAAAERWIDVSLVRSRMRERSVQKIPGCS 344
L+N+YA+ W ++ +R +MR + +K+ GCS
Sbjct: 604 LANVYASEGNWNEMGRIRKKMRVKEAKKLTGCS 636
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 87/353 (24%), Positives = 150/353 (42%), Gaps = 82/353 (23%)
Query: 14 CGFVKDGDLSSARGVFDAMPEKNVVSFTTMIDGYAKAGDMAAARFLFEQATE-KDVVAWS 72
CG +D S FD + + +VS M+ + G+M A +F + E D V+W+
Sbjct: 175 CGLFRDA--CSVVSGFDGVVD--LVSKNAMVAACCREGEMDMALNVFWKNHELNDTVSWN 230
Query: 73 ALISGYVQNGQPNQALKVFLEMESKNVKPDEFILVSLMSATSQLGHLELAQWVDSYVSKS 132
LI+GY QNG ++AL +F++M + V+ DE L S++S S L HL+L + V ++V K+
Sbjct: 231 TLIAGYAQNGYMDKALALFVKMTERGVRFDEHTLASVLSVCSGLKHLKLGKCVHAWVLKN 290
Query: 133 SIDLQQDHVIAALLDMNAKCGN-------------------------------MDRALKL 161
+ Q + + ++D+ KCGN M +A +L
Sbjct: 291 DYNSNQ-FISSGIVDLYCKCGNIRYAELVYAGIGIKSQFAVSSLIVGYSSQGEMMKAQRL 349
Query: 162 FKEMPKRDLVSYCSMIQGLSIHGCGEDAVRLFNSMLM-EGLVPDEVAFTIILTACSHSGL 220
F + +R+ V + ++ G + E+ +LF + E L+PD + +L AC+
Sbjct: 350 FDSLLERNSVVWTALCSGYAKSQQCEEVFKLFRKFVTREELIPDAMIIIRVLGACATQAT 409
Query: 221 VDEG---WNYFQSMKQKYGISPSPDHFACMVDLLSRSGHLGDA----------------- 260
+ G Y M+ K + MVD+ S+ G++ A
Sbjct: 410 LSLGKQIHTYILRMRLK----MDKKLLSAMVDMYSKCGNIMYAEKSFQLMTDRDRDVILY 465
Query: 261 --------------------YELMKSMHEPHAGAWGALLGACKLHGDSDLGEI 293
++++K +P A + ALL AC+ G + GEI
Sbjct: 466 NVMIAGYAHHGFENKAIQLFHDMLKKNVKPDAVTFVALLSACRHRGLVEQGEI 518
Score = 89.0 bits (219), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 65/248 (26%), Positives = 125/248 (50%), Gaps = 37/248 (14%)
Query: 5 NVASWNAMLCGFVKDGDLSSARGVFDAMPEKNVVSFTTMIDGYAKAGDMAAARFLFEQAT 64
++ + N ++ + K G L A +FD +P N S+ +I Y KA ++ AR +F+ A
Sbjct: 26 SIFTCNQLIHLYSKHGLLKDAHKLFDEIPHPNAYSWNALIMAYIKAQNLTQARAVFDSAV 85
Query: 65 EKDVVAWSALISGYV-QNGQPNQALKVFLEMESKN--VKPDEFILVSLMSATSQLGHLEL 121
++D+V++++++S YV +G +A+ +F +M+S + DEF L ++++ +++L +
Sbjct: 86 DRDLVSYNSMLSAYVGADGYETEAVDLFDKMQSARDMIGIDEFSLTTMVNFSAKLRLVCY 145
Query: 122 AQWVDSYVSKSSIDLQQDHVIAALLDMNAKC----------------------------- 152
+ + SY+ K++ DL + ++L++M +KC
Sbjct: 146 GKQMHSYMVKTASDLSK-FASSSLINMYSKCGLFRDACSVVSGFDGVVDLVSKNAMVAAC 204
Query: 153 ---GNMDRALKLF-KEMPKRDLVSYCSMIQGLSIHGCGEDAVRLFNSMLMEGLVPDEVAF 208
G MD AL +F K D VS+ ++I G + +G + A+ LF M G+ DE
Sbjct: 205 CREGEMDMALNVFWKNHELNDTVSWNTLIAGYAQNGYMDKALALFVKMTERGVRFDEHTL 264
Query: 209 TIILTACS 216
+L+ CS
Sbjct: 265 ASVLSVCS 272
>Medtr3g408390.1 | PPR containing plant-like protein | HC |
chr3:1481664-1484476 | 20130731
Length = 392
Score = 201 bits (510), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 105/286 (36%), Positives = 177/286 (61%), Gaps = 17/286 (5%)
Query: 65 EKDVVAWSALISGY--VQNGQPNQA---LKVFLEM---ESKNVKPDEFILVSLMSATSQL 116
+++VV W+A+I+GY +++G A L +F EM V+P++ +V L+SA SQL
Sbjct: 3 DRNVVTWNAMITGYCSLKDGNEKNAVNGLCLFKEMLMVGGSEVRPNDTTVVCLLSAASQL 62
Query: 117 GHLELAQWVDSYVSKSSIDLQQDHVIAA-LLDMNAKCGNMDRALKLFKEMPKRDLVSYCS 175
G +E+ + + K ++ D I L+DM +KCG ++ AL +F+ M R+++++ +
Sbjct: 63 GMVEIGVCLHGFAVKVLCKVEDDVFIGTGLVDMYSKCGCLESALSVFRRMKWRNVLTWTA 122
Query: 176 MIQGLSIHGCGEDAVRLFNSMLMEGLVPDEVAFTIILTACSHSGLVDEGWNYFQSMKQKY 235
M GL+IHG GE+A+++ M +G+ P+E FT +L+AC H+GLV+EG F+ M+ K+
Sbjct: 123 MTTGLAIHGRGEEALKILYEMGSDGVKPNETTFTSLLSACCHAGLVEEGLQLFRDMEGKF 182
Query: 236 GISPSPDHFACMVDLLSRSGHLGDAYELMKSMH-EPHAGAWGALLGACKLHGDSDLGEIV 294
G+ P H+ C+VDLL R+G+L +AY+ + M P W +LL AC++HGD +GE V
Sbjct: 183 GVVPWIQHYGCVVDLLGRNGNLNEAYDFIMEMPISPDTLIWRSLLSACRIHGDVVMGEKV 242
Query: 295 ANQLFELEPQN-------AANYILLSNIYAAAERWIDVSLVRSRMR 333
L + + ++ + +Y+ LSN+YA+A RW V +VR +M+
Sbjct: 243 GRFLLKFKEKSSEELAHKSEDYVALSNVYASAGRWDVVEVVRKKMK 288
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 61/235 (25%), Positives = 100/235 (42%), Gaps = 52/235 (22%)
Query: 1 MPQRNVASWNAMLCGF--VKDGDLSSARG---VFDAM----------------------- 32
MP RNV +WNAM+ G+ +KDG+ +A +F M
Sbjct: 1 MPDRNVVTWNAMITGYCSLKDGNEKNAVNGLCLFKEMLMVGGSEVRPNDTTVVCLLSAAS 60
Query: 33 ---------------------PEKNVVSFTTMIDGYAKAGDMAAARFLFEQATEKDVVAW 71
E +V T ++D Y+K G + +A +F + ++V+ W
Sbjct: 61 QLGMVEIGVCLHGFAVKVLCKVEDDVFIGTGLVDMYSKCGCLESALSVFRRMKWRNVLTW 120
Query: 72 SALISGYVQNGQPNQALKVFLEMESKNVKPDEFILVSLMSATSQLGHLELA-QWVDSYVS 130
+A+ +G +G+ +ALK+ EM S VKP+E SL+SA G +E Q
Sbjct: 121 TAMTTGLAIHGRGEEALKILYEMGSDGVKPNETTFTSLLSACCHAGLVEEGLQLFRDMEG 180
Query: 131 KSSIDLQQDHVIAALLDMNAKCGNMDRALKLFKEMP-KRDLVSYCSMIQGLSIHG 184
K + H ++D+ + GN++ A EMP D + + S++ IHG
Sbjct: 181 KFGVVPWIQH-YGCVVDLLGRNGNLNEAYDFIMEMPISPDTLIWRSLLSACRIHG 234
>Medtr2g028240.1 | PPR containing plant-like protein | HC |
chr2:10416867-10418417 | 20130731
Length = 516
Score = 200 bits (508), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 120/325 (36%), Positives = 179/325 (55%), Gaps = 13/325 (4%)
Query: 27 GVFDAMPEKNVVSFTTMIDGYAKAGDMAAARFLFEQATE-KDVVAWSALISGYVQNGQPN 85
G+ AM VV T +ID Y+ G + A +F KD + ++L+SG ++NG+
Sbjct: 183 GLVVAMGRDLVVLSTALIDFYSSVGCVHHALNVFYGLKGWKDDMIHNSLVSGCIKNGRYR 242
Query: 86 QALKVFLEMESKNVKPDEFILVSLMSATSQLGHLELAQWVDSYVSKSSIDLQQDHVIAAL 145
+A KV VKP+ L S++ S+ L + V + + + L
Sbjct: 243 EAFKVM-----SLVKPNAVALTSVLVCCSEESDLLTGKQVHCVAVRQGFTFET-QLCNVL 296
Query: 146 LDMNAKCGNMDRALKLFKEMPKRDLVSYCSMIQGLSIHGCGEDAVRLFNSMLMEG--LVP 203
LDM AKCG + +A +F + ++D++S+ MI G +GCG +AV LF M+ +G ++P
Sbjct: 297 LDMYAKCGKILQAWSVFDGIFQKDVISWTCMIDGYGRNGCGYEAVELFWKMMEDGSEVLP 356
Query: 204 DEVAFTIILTACSHSGLVDEGWNYFQSMKQKYGISPSPDHFACMVDLLSRSGHLGDAYEL 263
+ V F +L+AC HSGLV+EG F MK+KYGI P P+H+AC +D+L R+G + + +
Sbjct: 357 NSVTFLSVLSACGHSGLVEEGKQCFNIMKEKYGIDPEPEHYACFIDILGRAGKIEEVWSA 416
Query: 264 MKSM----HEPHAGAWGALLGACKLHGDSDLGEIVANQLFELEPQNAANYILLSNIYAAA 319
++M P AG W +LL AC L D + GE A L +LEP A+N +L SN YAA
Sbjct: 417 YQNMIDQGTSPTAGVWISLLNACSLGQDFERGEFAAKSLLQLEPNKASNIVLASNFYAAI 476
Query: 320 ERWIDVSLVRSRMRERSVQKIPGCS 344
RW V +RS MRE+ + K G S
Sbjct: 477 GRWDCVGELRSMMREKGLVKEAGNS 501
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 81/326 (24%), Positives = 149/326 (45%), Gaps = 63/326 (19%)
Query: 34 EKNVVSFTTMIDGYAKAGDMAAARFLFEQATEKDVVAWSALISGYVQNGQPNQALKVFLE 93
+ V T ++D Y++ G + ++ +F++ +DVVAW+ L+S +++ G+P++A++V E
Sbjct: 90 DSGTVPKTALLDMYSRHGSLNSSLKVFDEMLHRDVVAWNTLLSCFLRCGKPDEAIRVLRE 149
Query: 94 MESKNVKPDEFILVSLMSATSQLGHLELAQWVDSYVSKSSIDLQQDHVI--AALLDMNAK 151
M +NV+ EF L S++ + L LE + V V + + +D V+ AL+D +
Sbjct: 150 MGRENVEMSEFTLCSVLKCCASLKALEFGRQVHGLV----VAMGRDLVVLSTALIDFYSS 205
Query: 152 CGNMDRALKLFKEMPK-RDLVSYCSMIQGLSIHGCGEDAVRLFNSMLMEGLVPDEVAFTI 210
G + AL +F + +D + + S++ G +G +A + +M + P+ VA T
Sbjct: 206 VGCVHHALNVFYGLKGWKDDMIHNSLVSGCIKNGRYREAFK-----VMSLVKPNAVALTS 260
Query: 211 ILTACSHS-----------------------------------GLVDEGWNYFQSMKQKY 235
+L CS G + + W+ F + QK
Sbjct: 261 VLVCCSEESDLLTGKQVHCVAVRQGFTFETQLCNVLLDMYAKCGKILQAWSVFDGIFQKD 320
Query: 236 GISPSPDHFACMVDLLSRSGHLGDAYELMKSMHE------PHAGAWGALLGACKLHGDSD 289
IS + CM+D R+G +A EL M E P++ + ++L AC G +
Sbjct: 321 VIS-----WTCMIDGYGRNGCGYEAVELFWKMMEDGSEVLPNSVTFLSVLSACGHSGLVE 375
Query: 290 LGEIVANQLFEL-----EPQNAANYI 310
G+ N + E EP++ A +I
Sbjct: 376 EGKQCFNIMKEKYGIDPEPEHYACFI 401
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 36/157 (22%), Positives = 74/157 (47%), Gaps = 7/157 (4%)
Query: 61 EQATEKDVVAWSALISGYVQNGQPNQALKVFLEMESKNVKPDEFILVSLMSAT-SQLGHL 119
Q + + ++LI+ Y++ G P A +FL + + D L+ + + LG
Sbjct: 20 HQLLHRPISELNSLITSYIRRGHPISAFNLFLSLRRIRIDLDSHTFTPLLRPSPTSLGKQ 79
Query: 120 ELAQWVDSYVSKSSIDLQQDHVIAALLDMNAKCGNMDRALKLFKEMPKRDLVSYCSMIQG 179
+Q + + ++ ALLDM ++ G+++ +LK+F EM RD+V++ +++
Sbjct: 80 LHSQMIKTGSDSGTVPK------TALLDMYSRHGSLNSSLKVFDEMLHRDVVAWNTLLSC 133
Query: 180 LSIHGCGEDAVRLFNSMLMEGLVPDEVAFTIILTACS 216
G ++A+R+ M E + E +L C+
Sbjct: 134 FLRCGKPDEAIRVLREMGRENVEMSEFTLCSVLKCCA 170
>Medtr3g077200.1 | PPR containing plant-like protein | HC |
chr3:34651569-34656476 | 20130731
Length = 553
Score = 199 bits (506), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 110/308 (35%), Positives = 177/308 (57%), Gaps = 7/308 (2%)
Query: 41 TTMIDGYAKAGDMAAARFLFEQATEKDVVAWSALISGYVQNGQPNQALKVFLEMESKNVK 100
+ ++ Y++ + +A +F D+V WSALISGY Q G+ +AL F ++ K+ K
Sbjct: 244 SLLVSMYSRCKCIDSAYRVFCGIFNPDLVTWSALISGYSQCGEYQKALLFFRKLNMKSKK 303
Query: 101 PDEFILVSLMSATSQLGHLELAQWVDSYVSKSSIDLQQDHVIAALLDMNAKCGNMDRALK 160
D ++ +++++ +Q+ ++ + YV + ++ V +AL+DM +KCG +
Sbjct: 304 LDSVLIATVLASITQMANVLPGCEIHGYVLRHGLE-SDVKVSSALIDMYSKCGFLHLGTC 362
Query: 161 LFKEMPKRDLVSYCSMIQGLSIHGCGEDAVRLFNSMLMEGLVPDEVAFTIILTACSHSGL 220
+F+ M +R+++SY SMI +HGC A +F+ ML +GLVPDE F+ +L+AC H+GL
Sbjct: 363 VFRIMLERNIISYNSMILAYGLHGCASQAFTMFDEMLQKGLVPDEGTFSALLSACCHAGL 422
Query: 221 VDEGWNYFQSMKQKYGISPSPDHFACMVDLLSRSGHLGDAYELMKSMHEPHAGA-WGALL 279
V +G F MK ++ I P+H+ MV LL G L +AY L +S+ +P A GALL
Sbjct: 423 VKDGRELFWRMKDEFNIKARPEHYVYMVKLLGGVGELEEAYNLTQSLPKPVDKAILGALL 482
Query: 280 GACKLHGDSDLGEIVANQLFELEPQNAANYILLSNIYAAAERWIDVSLVRSRM-----RE 334
C +G+S+L E VA Q+F+ P + ++LSNIYA RW DV +R +M +
Sbjct: 483 SCCDSYGNSELAETVAQQIFKSNPADNVYRVMLSNIYAGDGRWDDVKKLRDKMVGGQKKM 542
Query: 335 RSVQKIPG 342
R V I G
Sbjct: 543 RGVSWIEG 550
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 62/246 (25%), Positives = 116/246 (47%), Gaps = 2/246 (0%)
Query: 41 TTMIDGYAKAGDMAAARFLFEQATEKDVVAWSALISGYVQNGQPNQALKVFLEMESKNVK 100
+ ++ Y+K G + AR +F+ E D+V W++LIS Y +G +++F M K
Sbjct: 143 SALVSAYSKLGVVHEARRVFDGIVEPDLVLWNSLISAYGGSGMWEIGIQMFSSMRLAGKK 202
Query: 101 PDEFILVSLMSATSQLGHLELAQWVDSYVSKSSIDLQQDHVIAALLDMNAKCGNMDRALK 160
PD F L L+ + L + Q + KS +D HV + L+ M ++C +D A +
Sbjct: 203 PDGFTLAGLLGGIADSSLLSIGQELHGLSQKSGLD-SDCHVGSLLVSMYSRCKCIDSAYR 261
Query: 161 LFKEMPKRDLVSYCSMIQGLSIHGCGEDAVRLFNSMLMEGLVPDEVAFTIILTACSHSGL 220
+F + DLV++ ++I G S G + A+ F + M+ D V +L + +
Sbjct: 262 VFCGIFNPDLVTWSALISGYSQCGEYQKALLFFRKLNMKSKKLDSVLIATVLASITQMAN 321
Query: 221 VDEGWNYFQSMKQKYGISPSPDHFACMVDLLSRSGHLGDAYELMKSMHEPHAGAWGALLG 280
V G ++G+ + ++D+ S+ G L + + M E + ++ +++
Sbjct: 322 VLPGCE-IHGYVLRHGLESDVKVSSALIDMYSKCGFLHLGTCVFRIMLERNIISYNSMIL 380
Query: 281 ACKLHG 286
A LHG
Sbjct: 381 AYGLHG 386
Score = 72.8 bits (177), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 61/260 (23%), Positives = 114/260 (43%), Gaps = 9/260 (3%)
Query: 41 TTMIDGYAKAGDMAAARFLFEQATEKDVVAWSALISGYVQNGQPNQALKVFLEMESKNVK 100
T +I YA + A +F++ + + V W+++I + + + + A+ +F M +++
Sbjct: 42 TQIIRLYAFNNHINYAHHVFDKTSTRSVFLWNSMIRAFAKARRFSNAISLFRTMLVDDIR 101
Query: 101 PDEFILVSLMSATSQLGHLELAQWVDSYVSKSSIDLQQDHV-IAALLDMNAKCGNMDRAL 159
PD + + A + + + V S S+ L D + +AL+ +K G + A
Sbjct: 102 PDNYTYACAIRACADSFDFGMLRVVHG--SAVSVGLGLDPICCSALVSAYSKLGVVHEAR 159
Query: 160 KLFKEMPKRDLVSYCSMIQGLSIHGCGEDAVRLFNSMLMEGLVPDEVAFTIILTACSHSG 219
++F + + DLV + S+I G E +++F+SM + G PD +L + S
Sbjct: 160 RVFDGIVEPDLVLWNSLISAYGGSGMWEIGIQMFSSMRLAGKKPDGFTLAGLLGGIADSS 219
Query: 220 LVDEGWNYFQSMKQKYGISPSPDHFACMVDLLSRSGHLGDAYELMKSMHEPHAGAWGALL 279
L+ G + QK G+ + +V + SR + AY + + P W AL+
Sbjct: 220 LLSIGQE-LHGLSQKSGLDSDCHVGSLLVSMYSRCKCIDSAYRVFCGIFNPDLVTWSALI 278
Query: 280 GACKLHGDSDLGEIVANQLF 299
G S GE LF
Sbjct: 279 S-----GYSQCGEYQKALLF 293
>Medtr7g092100.1 | RNAediting factor 1 | HC | chr7:36467361-36465331
| 20130731
Length = 596
Score = 198 bits (503), Expect = 8e-51, Method: Compositional matrix adjust.
Identities = 110/308 (35%), Positives = 185/308 (60%), Gaps = 6/308 (1%)
Query: 41 TTMIDGYAKAGDMAAARFLFEQATEKDVVAWSALISGYVQNGQPNQALKVF--LEMESKN 98
+++ID YAK GD+ A +F++ ++VV+WS LI GYVQ G+ +++L++F +E +N
Sbjct: 160 SSVIDMYAKCGDICYAHNVFDEMPYRNVVSWSGLIYGYVQLGEDDESLRLFKRFLVEEEN 219
Query: 99 VKPDEFILVSLMSATSQLGHLELAQWVDSYVSKSSIDLQQDHVIAALLDMNAKCGNMDRA 158
++F L S++ L++ + + K+S D V ++L+ + +KCG ++ A
Sbjct: 220 EGVNDFTLSSVLRVCGGSTLLQMGRLIHGLSFKTSFD-SSCFVASSLISLYSKCGVVEEA 278
Query: 159 LKLFKEMPKRDLVSYCSMIQGLSIHGCGEDAVRLFNSML-MEGLVPDEVAFTIILTACSH 217
+F+E+ R+L + +M+ + H + LF+ M + G+ + + F +L ACSH
Sbjct: 279 YDVFEEVTVRNLGMWNAMLIACAQHAHTDKTFELFDKMKSVGGMKANFITFLCVLYACSH 338
Query: 218 SGLVDEGWNYFQSMKQKYGISPSPDHFACMVDLLSRSGHLGDAYELMKSM-HEPHAGAWG 276
+GLV++G YF+ MK YGI P H++ MVDLL R+G L DA +L++ M EP WG
Sbjct: 339 AGLVEKGKYYFELMKD-YGIEPGTQHYSTMVDLLGRAGKLNDAVKLIEEMPMEPTESVWG 397
Query: 277 ALLGACKLHGDSDLGEIVANQLFELEPQNAANYILLSNIYAAAERWIDVSLVRSRMRERS 336
ALL C+LHG++ L VA+++ EL ++ +++LSN YAAA RW + + R MR+R
Sbjct: 398 ALLTGCRLHGNTKLASYVADRVSELGSVSSGLHVMLSNAYAAAGRWEEAAKARKMMRDRG 457
Query: 337 VQKIPGCS 344
++K G S
Sbjct: 458 IKKETGLS 465
Score = 100 bits (249), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 70/249 (28%), Positives = 123/249 (49%), Gaps = 4/249 (1%)
Query: 43 MIDGYAKAGDMAAARFLFEQATEKDVVAWSALISGYVQNGQPNQALKVFLEMESKNVKPD 102
+I+ Y+K ++ +F + K WS++IS + QN P +L F M + V PD
Sbjct: 61 LINFYSKTHLPYSSLQIFHDSPHKSATTWSSVISSFAQNDLPLLSLNYFRLMLRQGVPPD 120
Query: 103 EFILVSLMSATSQLGHLELAQWVDSYVSKSSIDLQQDHVIAALLDMNAKCGNMDRALKLF 162
+ I S + L L +A+ + + K++ L V ++++DM AKCG++ A +F
Sbjct: 121 DHIFPSATKSCGILSSLPVAKMLHCFALKTAYHLDI-FVGSSVIDMYAKCGDICYAHNVF 179
Query: 163 KEMPKRDLVSYCSMIQGLSIHGCGEDAVRLFNSMLMEGLVPDEVAFTI--ILTACSHSGL 220
EMP R++VS+ +I G G ++++RLF L+E FT+ +L C S L
Sbjct: 180 DEMPYRNVVSWSGLIYGYVQLGEDDESLRLFKRFLVEEENEGVNDFTLSSVLRVCGGSTL 239
Query: 221 VDEGWNYFQSMKQKYGISPSPDHFACMVDLLSRSGHLGDAYELMKSMHEPHAGAWGALLG 280
+ G + K S + ++ L S+ G + +AY++ + + + G W A+L
Sbjct: 240 LQMG-RLIHGLSFKTSFDSSCFVASSLISLYSKCGVVEEAYDVFEEVTVRNLGMWNAMLI 298
Query: 281 ACKLHGDSD 289
AC H +D
Sbjct: 299 ACAQHAHTD 307
>Medtr5g043920.1 | PPR containing plant-like protein | HC |
chr5:19295539-19293687 | 20130731
Length = 498
Score = 198 bits (503), Expect = 8e-51, Method: Compositional matrix adjust.
Identities = 107/316 (33%), Positives = 181/316 (57%), Gaps = 8/316 (2%)
Query: 34 EKNVVSFTTMIDGYAKAGDMAAARFLFEQATEKDVVAWSALISGYVQNGQPNQALKVFLE 93
+ +V MI+ Y + AR +F++ + +V+W+++++ V+N + + F +
Sbjct: 143 DSDVYVCNNMINFYGCCKKIVYARKVFDEMCVRTIVSWNSVMTACVENVWLSDGIGYFFK 202
Query: 94 MESKNVKPDEFILVSLMSATSQLGHLELAQWVDSYVSKSSIDLQQDHVIAALLDMNAKCG 153
M +PDE +V L+S ++LG+L L +WV S + + L H+ AL+DM K G
Sbjct: 203 MRDCAFEPDETSMVLLLSVCAELGYLSLGRWVHSQLILKGMVLSV-HLGTALVDMYGKSG 261
Query: 154 NMDRALKLFKEMPKRDLVSYCSMIQGLSIHGCGEDAVRLFNSM---LMEGLVPDEVAFTI 210
+ A +F+ M KR++ ++ +MI GL+ HG E+A+ LF+ M + P+ V +
Sbjct: 262 ALGYARVVFERMEKRNVWTWSAMIMGLAQHGFAEEALVLFDMMNDKKSNNISPNYVTYLG 321
Query: 211 ILTACSHSGLVDEGWNYFQSMKQKYGISPSPDHFACMVDLLSRSGHLGDAYELMKSM-HE 269
+L ACSH+G+VDEG+ YF+ M+ +GI P H+ MVD+L R+GHLG+AY ++SM
Sbjct: 322 VLCACSHAGMVDEGFRYFRDMEFVHGIKPMMVHYGAMVDVLGRAGHLGEAYRFIQSMPFA 381
Query: 270 PHAGAWGALLGACKLHGDSD---LGEIVANQLFELEPQNAANYILLSNIYAAAERWIDVS 326
P W LL AC +H D +G+ V +L E+EP+ N ++++N+YA W +
Sbjct: 382 PDPIVWRTLLSACTVHDVCDRTGIGDKVRKRLLEMEPKRGGNLVIVANMYAEVGNWEKAA 441
Query: 327 LVRSRMRERSVQKIPG 342
VR MR+ ++K+ G
Sbjct: 442 NVRRVMRDGGLKKMAG 457
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 59/267 (22%), Positives = 121/267 (45%), Gaps = 5/267 (1%)
Query: 55 AARFLFEQATEKDVVAWSALISGYVQNGQPNQALKVFLEMESKNVKPDEFILVSLMSATS 114
A + +F + ++W+ LI GY + P +++ VF +M VKP++ + + +
Sbjct: 63 ARKLVFHFSNNPSPISWNILIRGYASSDSPIESIWVFKKMRENGVKPNKLTYPFIFKSCA 122
Query: 115 QLGHLELAQWVDSYVSKSSIDLQQDHVIAALLDMNAKCGNMDRALKLFKEMPKRDLVSYC 174
L + V + + K +D +V +++ C + A K+F EM R +VS+
Sbjct: 123 MALVLCEGKQVHADLVKFGLD-SDVYVCNNMINFYGCCKKIVYARKVFDEMCVRTIVSWN 181
Query: 175 SMIQGLSIHGCGEDAVRLFNSMLMEGLVPDEVAFTIILTACSHSGLVDEG-WNYFQSMKQ 233
S++ + D + F M PDE + ++L+ C+ G + G W + Q + +
Sbjct: 182 SVMTACVENVWLSDGIGYFFKMRDCAFEPDETSMVLLLSVCAELGYLSLGRWVHSQLILK 241
Query: 234 KYGISPSPDHFACMVDLLSRSGHLGDAYELMKSMHEPHAGAWGALLGACKLHGDSDLGEI 293
G+ S +VD+ +SG LG A + + M + + W A++ HG ++ +
Sbjct: 242 --GMVLSVHLGTALVDMYGKSGALGYARVVFERMEKRNVWTWSAMIMGLAQHGFAEEALV 299
Query: 294 VANQLFELEPQN-AANYILLSNIYAAA 319
+ + + + + N + NY+ + A
Sbjct: 300 LFDMMNDKKSNNISPNYVTYLGVLCAC 326
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/227 (22%), Positives = 96/227 (42%), Gaps = 45/227 (19%)
Query: 1 MPQRNVASWNAMLCGFVKDGDLSSARGVFDAM------PEKNVVSF-------------- 40
M R + SWN+++ V++ LS G F M P++ +
Sbjct: 172 MCVRTIVSWNSVMTACVENVWLSDGIGYFFKMRDCAFEPDETSMVLLLSVCAELGYLSLG 231
Query: 41 -------------------TTMIDGYAKAGDMAAARFLFEQATEKDVVAWSALISGYVQN 81
T ++D Y K+G + AR +FE+ +++V WSA+I G Q+
Sbjct: 232 RWVHSQLILKGMVLSVHLGTALVDMYGKSGALGYARVVFERMEKRNVWTWSAMIMGLAQH 291
Query: 82 GQPNQALKVFLEM---ESKNVKPDEFILVSLMSATSQLGHL-ELAQWVDSYVSKSSIDLQ 137
G +AL +F M +S N+ P+ + ++ A S G + E ++ I
Sbjct: 292 GFAEEALVLFDMMNDKKSNNISPNYVTYLGVLCACSHAGMVDEGFRYFRDMEFVHGIKPM 351
Query: 138 QDHVIAALLDMNAKCGNMDRALKLFKEMP-KRDLVSYCSMIQGLSIH 183
H A++D+ + G++ A + + MP D + + +++ ++H
Sbjct: 352 MVH-YGAMVDVLGRAGHLGEAYRFIQSMPFAPDPIVWRTLLSACTVH 397
>Medtr8g088300.1 | pentatricopeptide (PPR) repeat protein | HC |
chr8:36572831-36570446 | 20130731
Length = 700
Score = 197 bits (500), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 125/392 (31%), Positives = 203/392 (51%), Gaps = 54/392 (13%)
Query: 1 MPQRNVASWNAMLCGFVKDGDLSSARGVFDAMPEKNVVSF-------TTMIDG------- 46
MP R+V SW +++ G ++G A F KN+V F TT++ G
Sbjct: 184 MPSRDVISWTSIIVGLDRNGKSYQALFFF-----KNMVGFSGVGISSTTLVCGLSAAAKI 238
Query: 47 ---------------------------------YAKAGDMAAARFLFEQATEKDVVAWSA 73
YA M A +F + K+VV W+A
Sbjct: 239 LDFYAGIQIHCCMFKFGFCCGLDEFVSASLVTFYASCKRMGDACKVFGETVCKNVVVWTA 298
Query: 74 LISGYVQNGQPNQALKVFLEMESKNVKPDEFILVSLMSATSQLGHLELAQWVDSYVSKSS 133
L++G N + +AL+VF EM NV P+E S +++ L LE + + + K
Sbjct: 299 LLTGCGLNDKHVEALEVFSEMMRFNVVPNESSFTSALNSCVGLEDLEKGRVIHAAGIKMG 358
Query: 134 IDLQQDHVIAALLDMNAKCGNMDRALKLFKEMPKRDLVSYCSMIQGLSIHGCGEDAVRLF 193
++ + +L+ M +KCG + AL +FK + ++++VS+ S+I G + HGCG A+ LF
Sbjct: 359 LE-NAVYTGNSLVVMYSKCGFIGDALCVFKGICEKNVVSWNSVIVGCAQHGCGTWALVLF 417
Query: 194 NSMLMEGLVPDEVAFTIILTACSHSGLVDEGWNYFQSMKQKYGISPSPDHFACMVDLLSR 253
ML EG+ DE+ T +L+ACS SG++ + +F +K + + +H+ACMVD+L R
Sbjct: 418 KEMLREGVESDEITLTGLLSACSRSGMLQKARCFFGYFARKRSMKLTVEHYACMVDVLGR 477
Query: 254 SGHLGDAYELMKSMH-EPHAGAWGALLGACKLHGDSDLGEIVANQLFELEPQNAANYILL 312
G + +A L SM E ++ W LL AC++H D+ E A ++FE+EP +A Y+LL
Sbjct: 478 CGEVEEAEALATSMPVEANSMVWLVLLSACRVHSSLDVAERAAKRIFEMEPDCSAAYVLL 537
Query: 313 SNIYAAAERWIDVSLVRSRMRERSVQKIPGCS 344
SN+YA++ RW++V+ +R +M+ + K PG S
Sbjct: 538 SNLYASSRRWLEVARIRMKMKHNGIVKQPGSS 569
Score = 124 bits (311), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 88/326 (26%), Positives = 160/326 (49%), Gaps = 9/326 (2%)
Query: 1 MPQRNVASWNAMLCGFVKDGDLSSARGVFDAMP--EKNVVSFTTMIDGYAKAGDMAAARF 58
MPQRN SW ++ GF+ G ++ A F+AMP +K+V ++ M++GY G + A
Sbjct: 120 MPQRNSISWTTIIHGFLSTGRVNEAERFFNAMPYVDKDVATWNAMVNGYCNNGRVNDALR 179
Query: 59 LFEQATEKDVVAWSALISGYVQNGQPNQALKVFLEMES-KNVKPDEFILVSLMSATSQLG 117
LF Q +DV++W+++I G +NG+ QAL F M V LV +SA +++
Sbjct: 180 LFCQMPSRDVISWTSIIVGLDRNGKSYQALFFFKNMVGFSGVGISSTTLVCGLSAAAKIL 239
Query: 118 HLELAQWVDSYVSKSSIDLQQDHVI-AALLDMNAKCGNMDRALKLFKEMPKRDLVSYCSM 176
+ + K D + A+L+ A C M A K+F E +++V + ++
Sbjct: 240 DFYAGIQIHCCMFKFGFCCGLDEFVSASLVTFYASCKRMGDACKVFGETVCKNVVVWTAL 299
Query: 177 IQGLSIHGCGEDAVRLFNSMLMEGLVPDEVAFTIILTACSHSGLVD-EGWNYFQSMKQKY 235
+ G ++ +A+ +F+ M+ +VP+E +FT L +C GL D E + K
Sbjct: 300 LTGCGLNDKHVEALEVFSEMMRFNVVPNESSFTSALNSC--VGLEDLEKGRVIHAAGIKM 357
Query: 236 GISPSPDHFACMVDLLSRSGHLGDAYELMKSMHEPHAGAWGALLGACKLHGDSDLGEIVA 295
G+ + +V + S+ G +GDA + K + E + +W +++ C HG ++
Sbjct: 358 GLENAVYTGNSLVVMYSKCGFIGDALCVFKGICEKNVVSWNSVIVGCAQHGCGTWALVLF 417
Query: 296 NQLFELEPQNAANYILLSNIYAAAER 321
++ L ++ I L+ + +A R
Sbjct: 418 KEM--LREGVESDEITLTGLLSACSR 441
Score = 85.5 bits (210), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 74/290 (25%), Positives = 131/290 (45%), Gaps = 15/290 (5%)
Query: 2 PQRNVASWNAMLCGFVKDGDLSSARGVFDAMPEKNVVSFTTMIDGYAKAGDMAAARFLFE 61
P+ + S N +K+ L SAR VF+ +P +V +T ++ YA ++ A LF
Sbjct: 26 PKSSSTSLNFTFLNHLKNQKLDSARAVFNKIPSPHVSLYTKLLLAYAHNNNLHEAINLFN 85
Query: 62 Q--ATEKDVVAWSALISGYVQNGQPNQALKVFLEMESKNVKPDEFILVSLMSATSQLGHL 119
Q + KD ++W+++I + A+K+F EM +N I+ +S T ++
Sbjct: 86 QIPSNTKDTISWNSVIKASIICNDFVTAVKLFDEMPQRNSISWTTIIHGFLS-TGRVNEA 144
Query: 120 ELAQWVDSYVSKSSIDLQQDHVIAALLDMNAKCGNMDRALKLFKEMPKRDLVSYCSMIQG 179
E YV K A+++ G ++ AL+LF +MP RD++S+ S+I G
Sbjct: 145 ERFFNAMPYVDKDVATWN------AMVNGYCNNGRVNDALRLFCQMPSRDVISWTSIIVG 198
Query: 180 LSIHGCGEDAVRLFNSMLMEGLVPDEVAFTIILTACSHSGLVDEGWNYFQ--SMKQKYGI 237
L +G A+ F +M+ G ++ T ++ S + + + + Q K+G
Sbjct: 199 LDRNGKSYQALFFFKNMV--GFSGVGISSTTLVCGLSAAAKILDFYAGIQIHCCMFKFGF 256
Query: 238 SPSPDHF--ACMVDLLSRSGHLGDAYELMKSMHEPHAGAWGALLGACKLH 285
D F A +V + +GDA ++ + W ALL C L+
Sbjct: 257 CCGLDEFVSASLVTFYASCKRMGDACKVFGETVCKNVVVWTALLTGCGLN 306
>Medtr3g117620.1 | PPR containing plant-like protein | HC |
chr3:55081139-55078984 | 20130731
Length = 493
Score = 197 bits (500), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 105/318 (33%), Positives = 188/318 (59%), Gaps = 14/318 (4%)
Query: 41 TTMIDGYAKAGDMAAARFLFEQATEKDVVAWSALISGYVQNGQPNQALKVFLEMESKNVK 100
+ +ID Y+K ++ A +F++ +++ V +AL+SGY + G +A ++ +M +K
Sbjct: 142 SALIDFYSKLLNVKDAALVFDEIPDRNTVCANALLSGYCEFGLWVKAFELIRKMPLLKLK 201
Query: 101 PDEFILVSLMSATSQLGHLELAQWVDSYVSKSSIDLQQDHVI-AALLDMNAKCGNMDRAL 159
D F L + + A + L +E+ + + SY+ ++ D++ D + + L++M KCG +++A
Sbjct: 202 YDHFTLSAALRACTGLSSVEMGRQLHSYLLRTMADIESDVFLQSTLIEMYGKCGMVEKAQ 261
Query: 160 KLFK-------EMPKRDLVSYCSMIQGLSIHGCGEDAVRLFNSMLMEGLVPDEVAFTIIL 212
+FK + RD+V + SM+ +G ++ + L++ ML EG+ PD ++F I+
Sbjct: 262 LVFKLDGMDIRKERSRDVVFWTSMLGVYGKNGHYKEVIDLYSEMLREGIKPDGISFLTII 321
Query: 213 TACSHSGLVDEGWNYFQSMKQKYGISPSPDHFACMVDLLSRSGHLGDAYELM-KSMHEPH 271
+AC H+G VD G YF+SM + + P P+H++C+VDLL R+G L A+EL+ ++ H
Sbjct: 322 SACGHTGQVDAGVKYFESMTNDFKLDPGPEHYSCLVDLLCRAGELNKAWELLNETCHHKG 381
Query: 272 AG-----AWGALLGACKLHGDSDLGEIVANQLFELEPQNAANYILLSNIYAAAERWIDVS 326
G WGALL AC G+ +LG++ A + EL+PQNA ++LSN+YA W ++
Sbjct: 382 IGNCSVSMWGALLSACVDSGNIELGKLAAQRALELDPQNAGICVMLSNVYARLGMWDEIG 441
Query: 327 LVRSRMRERSVQKIPGCS 344
+R + +R ++K GCS
Sbjct: 442 RLRVLINQRGLRKDVGCS 459
Score = 62.0 bits (149), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 35/151 (23%), Positives = 78/151 (51%), Gaps = 9/151 (5%)
Query: 34 EKNVVSFTTMIDGYAKAGDMAAARFLFE-------QATEKDVVAWSALISGYVQNGQPNQ 86
E +V +T+I+ Y K G + A+ +F+ + +DVV W++++ Y +NG +
Sbjct: 238 ESDVFLQSTLIEMYGKCGMVEKAQLVFKLDGMDIRKERSRDVVFWTSMLGVYGKNGHYKE 297
Query: 87 ALKVFLEMESKNVKPDEFILVSLMSATSQLGHLELA-QWVDSYVSKSSIDLQQDHVIAAL 145
+ ++ EM + +KPD ++++SA G ++ ++ +S + +D +H + L
Sbjct: 298 VIDLYSEMLREGIKPDGISFLTIISACGHTGQVDAGVKYFESMTNDFKLDPGPEHY-SCL 356
Query: 146 LDMNAKCGNMDRALKLFKEMPKRDLVSYCSM 176
+D+ + G +++A +L E + CS+
Sbjct: 357 VDLLCRAGELNKAWELLNETCHHKGIGNCSV 387
>Medtr2g061460.1 | pentatricopeptide (PPR) repeat protein | HC |
chr2:26047948-26049264 | 20130731
Length = 438
Score = 194 bits (493), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 109/330 (33%), Positives = 182/330 (55%), Gaps = 8/330 (2%)
Query: 22 LSSARGVFDAMPEKNVVSFTTMIDGYAKAGDMAAARFLFEQ----ATEKDVVAWSALISG 77
L+ A +FD P +N V + ++I Y++ ++ A LF + E A +S
Sbjct: 103 LNHAHQLFDETPHRNDVIWNSIIALYSRVQNITTAVNLFNEMDVPPNESTFNPIIAALSL 162
Query: 78 YVQNGQPNQALKVFLEMESKNVKPDEFILVSLMSATSQLGHLELAQWVDSYVSKSSIDLQ 137
QN +A+ + M +KP L++L+ A+ + L L + + Y ++ ID
Sbjct: 163 SNQNNASFKAISFYRRMTGLKLKPGLITLLALVRASVSIAALNLIKEIHGYAMRNDID-S 221
Query: 138 QDHVIAALLDMNAKCGNMDRALKLFKEMP--KRDLVSYCSMIQGLSIHGCGEDAVRLFNS 195
+ + L++ +CG + + +FK M +D+V + ++I ++HG ++A+ F
Sbjct: 222 HPQLSSGLIEAYGRCGCLMDSRTVFKNMRGCDKDVVVWSNLISACALHGEAKEALEFFQE 281
Query: 196 MLMEGLVPDEVAFTIILTACSHSGLVDEGWNYFQSMKQKYGISPSPDHFACMVDLLSRSG 255
M + G+ PD + F +L ACSH+GL DE +F M + YG+ P+ +H++C+VD+LSR+G
Sbjct: 282 MEVSGVKPDGITFLAVLKACSHAGLDDEALCFFMKMHRDYGVEPNSEHYSCLVDVLSRAG 341
Query: 256 HLGDAYELMKSMH-EPHAGAWGALLGACKLHGDSDLGEIVANQLFELEPQNAANYILLSN 314
L +AYE++K M + A AWGALLGAC +G+ L EI L E+EP NAANY+LL+
Sbjct: 342 RLYEAYEVIKGMPVKVTAKAWGALLGACTNYGELGLAEIAGKALAEVEPDNAANYVLLAK 401
Query: 315 IYAAAERWIDVSLVRSRMRERSVQKIPGCS 344
IYA+ R + + M+E+ V+ G S
Sbjct: 402 IYASVGRREEADRMIREMKEKGVKTTSGTS 431
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 71/279 (25%), Positives = 121/279 (43%), Gaps = 50/279 (17%)
Query: 53 MAAARFLFEQATEKDVVAWSALISGYVQNGQPNQALKVFLEMESK---NVKPDEFILVSL 109
MA++ F F + +++++ I+ +V + +AL +F M S + P F LV L
Sbjct: 1 MASSSF-FYSPNHQRLLSFTKQITTHVNQSRHREALSIFHHMHSSLFMFLDPHVFTLV-L 58
Query: 110 MSATSQLGHLE-LAQWVDSYVSKSSIDLQQDHVIAALLDMNAKCGNMDRALKLFKEMPKR 168
S TS HL LA + S++ KSS + ++LL+ C +++ A +LF E P R
Sbjct: 59 KSCTSL--HLPYLATSIHSHLIKSSFLTNNPFLSSSLLNFYGHCVSLNHAHQLFDETPHR 116
Query: 169 DLVSYCSMIQGLSIHGCGEDAVRLFNSMLMEGLVPDEVAFTIILTACSHSGLVDEGW--- 225
+ V + S+I S AV LFN M + P+E F I+ A S S + +
Sbjct: 117 NDVIWNSIIALYSRVQNITTAVNLFNEM---DVPPNESTFNPIIAALSLSNQNNASFKAI 173
Query: 226 NYFQSM----------------------------KQKYG------ISPSPDHFACMVDLL 251
++++ M K+ +G I P + +++
Sbjct: 174 SFYRRMTGLKLKPGLITLLALVRASVSIAALNLIKEIHGYAMRNDIDSHPQLSSGLIEAY 233
Query: 252 SRSGHLGDAYELMKSMH--EPHAGAWGALLGACKLHGDS 288
R G L D+ + K+M + W L+ AC LHG++
Sbjct: 234 GRCGCLMDSRTVFKNMRGCDKDVVVWSNLISACALHGEA 272
>Medtr3g117150.1 | organelle transcript processing protein, putative
| HC | chr3:54810037-54807667 | 20130731
Length = 571
Score = 193 bits (491), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 100/308 (32%), Positives = 186/308 (60%), Gaps = 6/308 (1%)
Query: 43 MIDGYAKAGDMAAARFLFEQATEKDVVAWSALISGYVQNGQPNQALKVFLEMESKNVKPD 102
+I Y++ G++ AR +F++ + +DVV+W+++I+G+V + +A+++F M V +
Sbjct: 137 LIHMYSEIGELVIARQVFDRMSHRDVVSWTSMIAGFVNHHLTVEAIQLFQRMLEVGVDVN 196
Query: 103 EFILVSLMSATSQLGHLELAQWVDSYVSKSSIDLQQDHVIAALLDMNAKCGNMDRALKLF 162
E ++S++ + G L + + V V + ID + + V AL+ M +KCG ++ A ++F
Sbjct: 197 EATVISVLRGCADSGALSVGRKVHGIVKEKGIDFKAN-VCTALIHMYSKCGCLESAREVF 255
Query: 163 KEMPKRDLVSYCSMIQGLSIHGCGEDAVRLFNSMLMEGLVPDEVAFTIILTACSHSGLVD 222
++ RD+ + +MI GL+ HG ++A+ LF M + PDE ++L+A ++GLV
Sbjct: 256 DDVLDRDVFVWTAMIYGLACHGMCKEAIELFLEMETCNVKPDERTIMVVLSAYRNAGLVR 315
Query: 223 EGWNYFQSMKQKYGISPSPDHFACMVDLLSRSGHLGDAYELMKSM-HEPHAGAWGALLGA 281
EG+ +F ++++Y + P+ HF CMVDLL++ G L +A + + +M +P A W L+ A
Sbjct: 316 EGYMFFNDVQKRYSMKPNIKHFGCMVDLLAKGGCLEEAEDFINAMPMKPDAVIWRTLIWA 375
Query: 282 CKLHGDSDLGEIVANQLFELE---PQNAANYILLSNIYAAAERWIDVSLVRSRMRERSVQ 338
CK+H D++ E + L EL+ ++ +YIL SN+YA+ +W D + VR M ++ +
Sbjct: 376 CKVHADTERAERLMKHL-ELQGMSAHDSGSYILASNVYASTGKWCDKAEVRELMNKKGLV 434
Query: 339 KIPGCSKL 346
K PG S++
Sbjct: 435 KPPGSSRI 442
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 67/243 (27%), Positives = 110/243 (45%), Gaps = 44/243 (18%)
Query: 1 MPQRNVASWNAMLCGFVK-----------------------------------DGDLSSA 25
M R+V SW +M+ GFV G LS
Sbjct: 157 MSHRDVVSWTSMIAGFVNHHLTVEAIQLFQRMLEVGVDVNEATVISVLRGCADSGALSVG 216
Query: 26 RGVFDAMPEKNVVSF-----TTMIDGYAKAGDMAAARFLFEQATEKDVVAWSALISGYVQ 80
R V + EK + F T +I Y+K G + +AR +F+ ++DV W+A+I G
Sbjct: 217 RKVHGIVKEKGI-DFKANVCTALIHMYSKCGCLESAREVFDDVLDRDVFVWTAMIYGLAC 275
Query: 81 NGQPNQALKVFLEMESKNVKPDEFILVSLMSATSQLGHL-ELAQWVDSYVSKSSIDLQQD 139
+G +A+++FLEME+ NVKPDE ++ ++SA G + E + + + S+
Sbjct: 276 HGMCKEAIELFLEMETCNVKPDERTIMVVLSAYRNAGLVREGYMFFNDVQKRYSMKPNIK 335
Query: 140 HVIAALLDMNAKCGNMDRALKLFKEMP-KRDLVSYCSMIQGLSIHGCGEDAVRLFNSMLM 198
H ++D+ AK G ++ A MP K D V + ++I +H E A RL + +
Sbjct: 336 H-FGCMVDLLAKGGCLEEAEDFINAMPMKPDAVIWRTLIWACKVHADTERAERLMKHLEL 394
Query: 199 EGL 201
+G+
Sbjct: 395 QGM 397
Score = 82.4 bits (202), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 63/243 (25%), Positives = 110/243 (45%), Gaps = 8/243 (3%)
Query: 50 AGDMAAARFLFEQATEKDVVAWSALISGYVQNGQPN---QALKVFLEM--ESKNV-KPDE 103
+GD+ AR L + ++ +I Y P QAL +F+ M NV KPD
Sbjct: 37 SGDLNYARLLLNTNPSLNSYYYNTIIRAYSHTSNPTHHFQALSLFIFMLQPHTNVPKPDT 96
Query: 104 FILVSLMSATSQLGHLELAQWVDSYVSKSSIDLQQDHVIAALLDMNAKCGNMDRALKLFK 163
F + + +L + A+ + +++K ++ AL+ M ++ G + A ++F
Sbjct: 97 FTYSFALKSCGRLKLTQQAKQLHGFINKMGFGFDL-YIQNALIHMYSEIGELVIARQVFD 155
Query: 164 EMPKRDLVSYCSMIQGLSIHGCGEDAVRLFNSMLMEGLVPDEVAFTIILTACSHSGLVDE 223
M RD+VS+ SMI G H +A++LF ML G+ +E +L C+ SG +
Sbjct: 156 RMSHRDVVSWTSMIAGFVNHHLTVEAIQLFQRMLEVGVDVNEATVISVLRGCADSGALSV 215
Query: 224 GWNYFQSMKQKYGISPSPDHFACMVDLLSRSGHLGDAYELMKSMHEPHAGAWGALLGACK 283
G +K+K GI + ++ + S+ G L A E+ + + W A++
Sbjct: 216 GRKVHGIVKEK-GIDFKANVCTALIHMYSKCGCLESAREVFDDVLDRDVFVWTAMIYGLA 274
Query: 284 LHG 286
HG
Sbjct: 275 CHG 277
>Medtr5g008260.1 | pentatricopeptide (PPR) repeat protein | HC |
chr5:1721493-1719058 | 20130731
Length = 774
Score = 192 bits (489), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 108/308 (35%), Positives = 177/308 (57%), Gaps = 10/308 (3%)
Query: 41 TTMIDGYAKAGDMAAARF--LFEQATEKDVVAWSALISGYVQNGQPNQALKVFLEMESKN 98
T ++ YA G + F + + E D+V+W+A+IS + + P QA +F ++ +N
Sbjct: 338 TALVKSYADLGGHISDCFKLFLDTSGEHDIVSWTAIISVFAER-DPEQAFLLFCQLHREN 396
Query: 99 VKPDEFILVSLMSATSQLGHLELAQWVDSYVSKSSIDLQQDHVIA-ALLDMNAKCGNMDR 157
D + A + + A V S V K D V++ AL+ + G++
Sbjct: 397 FVLDRHTFSIALKACAYFVTEKNATEVHSQVMKQG--FHNDTVVSNALIHAYGRSGSLAL 454
Query: 158 ALKLFKEMPKRDLVSYCSMIQGLSIHGCGEDAVRLFNSMLMEGLVPDEVAFTIILTACSH 217
+ ++F EM DLVS+ SM++ +IHG +DA+ LF M + PD F +L ACSH
Sbjct: 455 SEQVFTEMGCHDLVSWNSMLKSYAIHGRAKDALDLFKQMDVH---PDSATFVALLAACSH 511
Query: 218 SGLVDEGWNYFQSMKQKYGISPSPDHFACMVDLLSRSGHLGDAYELMKSM-HEPHAGAWG 276
+GLV+EG F SM + +GI+P DH++CMVDL R+G + +A EL++ M +P + W
Sbjct: 512 AGLVEEGTQIFNSMTESHGIAPHLDHYSCMVDLYGRAGKIFEAEELIRKMPMKPDSVIWS 571
Query: 277 ALLGACKLHGDSDLGEIVANQLFELEPQNAANYILLSNIYAAAERWIDVSLVRSRMRERS 336
+LLG+C+ HG++DL ++ A++ L+P+N+ YI +SNIY++ +I+ L+R MR+
Sbjct: 572 SLLGSCRKHGEADLAKLAADKFKVLDPKNSLAYIQMSNIYSSGGSFIEAGLIRKEMRDSK 631
Query: 337 VQKIPGCS 344
V+K PG S
Sbjct: 632 VRKRPGLS 639
Score = 85.5 bits (210), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 54/193 (27%), Positives = 95/193 (49%), Gaps = 12/193 (6%)
Query: 34 EKNVVSFTTMIDGYAKAGDMAAARFLFEQATEKDVVAWSALISGYVQNGQPNQALKVFLE 93
+ ++ +++ Y K G + AR+LF+Q ++ V+W+ L+SGY Q G + +F
Sbjct: 112 QNDIFLTNNLLNMYCKCGHLDYARYLFDQMPRRNFVSWTVLVSGYAQFGLIRECFALFSG 171
Query: 94 MESKNVKPDEFILVSLMSATSQLGHLELAQWVDSYVSKSSIDLQQDHVIAALLDMNAKCG 153
M + +P+EF S++ A + ++ V + K S+D +V AL+ M +KC
Sbjct: 172 MLA-CFRPNEFAFASVLCACEEQD-VKYGLQVHAAALKMSLDFSV-YVANALITMYSKCS 228
Query: 154 ---------NMDRALKLFKEMPKRDLVSYCSMIQGLSIHGCGEDAVRLFNSMLMEGLVPD 204
D A +FK M R+L+S+ SMI G G G+ A+ LF M G+ +
Sbjct: 229 GGFGGSCDQTTDDAWMVFKSMEYRNLISWNSMISGFQFRGLGDKAIGLFAHMYCNGIRFN 288
Query: 205 EVAFTIILTACSH 217
+L++ +H
Sbjct: 289 STTLLGVLSSLNH 301
Score = 62.0 bits (149), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 41/153 (26%), Positives = 77/153 (50%), Gaps = 6/153 (3%)
Query: 34 EKNVVSFTTMIDGYAKAGDMAAARFLFEQATEKDVVAWSALISGYVQNGQPNQALKVFLE 93
+ V +I Y ++G +A + +F + D+V+W++++ Y +G+ AL +F +
Sbjct: 433 HNDTVVSNALIHAYGRSGSLALSEQVFTEMGCHDLVSWNSMLKSYAIHGRAKDALDLFKQ 492
Query: 94 MESKNVKPDEFILVSLMSATSQLGHLEL-AQWVDSYVSKSSIDLQQDHVIAALLDMNAKC 152
M+ V PD V+L++A S G +E Q +S I DH + ++D+ +
Sbjct: 493 MD---VHPDSATFVALLAACSHAGLVEEGTQIFNSMTESHGIAPHLDHY-SCMVDLYGRA 548
Query: 153 GNMDRALKLFKEMP-KRDLVSYCSMIQGLSIHG 184
G + A +L ++MP K D V + S++ HG
Sbjct: 549 GKIFEAEELIRKMPMKPDSVIWSSLLGSCRKHG 581
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 34/108 (31%), Positives = 56/108 (51%), Gaps = 2/108 (1%)
Query: 109 LMSATSQLGHLELAQWVDSYVSKSSIDLQQDHVIAA-LLDMNAKCGNMDRALKLFKEMPK 167
L A +Q +++ + Y+ +Q D + LL+M KCG++D A LF +MP+
Sbjct: 84 LFHACAQKKYIKQGMALHHYILNKHPKIQNDIFLTNNLLNMYCKCGHLDYARYLFDQMPR 143
Query: 168 RDLVSYCSMIQGLSIHGCGEDAVRLFNSMLMEGLVPDEVAFTIILTAC 215
R+ VS+ ++ G + G + LF+ ML P+E AF +L AC
Sbjct: 144 RNFVSWTVLVSGYAQFGLIRECFALFSGML-ACFRPNEFAFASVLCAC 190
>Medtr5g049780.1 | pentatricopeptide (PPR) repeat protein | HC |
chr5:21773208-21775311 | 20130731
Length = 662
Score = 192 bits (487), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 103/311 (33%), Positives = 172/311 (55%), Gaps = 1/311 (0%)
Query: 34 EKNVVSFTTMIDGYAKAGDMAAARFLFEQATEKDVVAWSALISGYVQNGQPNQALKVFLE 93
E V S T+++ Y+K + + +F V W++ I G VQNG+ AL +F E
Sbjct: 235 ESVVASQTSLLTMYSKCNMVEDSIKVFNSLAYASHVTWTSFIVGLVQNGREEVALSMFRE 294
Query: 94 MESKNVKPDEFILVSLMSATSQLGHLELAQWVDSYVSKSSIDLQQDHVIAALLDMNAKCG 153
M ++ P+ F L S++ A S L LE + + + K +D V AAL+ + KCG
Sbjct: 295 MMRCSISPNHFTLSSILHACSSLAMLEAGEQIHAVTVKLGVD-GNKFVDAALIHLYGKCG 353
Query: 154 NMDRALKLFKEMPKRDLVSYCSMIQGLSIHGCGEDAVRLFNSMLMEGLVPDEVAFTIILT 213
N+++A +F + + D+VS +MI + +G G +A+ LF + GL P+ V F IL
Sbjct: 354 NVEKARSVFDSLTELDIVSINTMIYAYAQNGFGHEALELFERLKKLGLEPNVVTFISILL 413
Query: 214 ACSHSGLVDEGWNYFQSMKQKYGISPSPDHFACMVDLLSRSGHLGDAYELMKSMHEPHAG 273
AC+++GLV+EG F ++ + I + DH+ CM+DLL R+ +A L++ P
Sbjct: 414 ACNNAGLVEEGCQIFSLIRNNHSIELTRDHYTCMIDLLGRAKRFEEATMLIEEGKNPDVI 473
Query: 274 AWGALLGACKLHGDSDLGEIVANQLFELEPQNAANYILLSNIYAAAERWIDVSLVRSRMR 333
W LL ACK+HG+ ++ E ++ + P++ +ILL+NIYA+A +W +V ++S R
Sbjct: 474 QWRTLLNACKIHGEVEMAEKFMKKMLDQAPRDGGTHILLTNIYASAGKWDNVIEMKSAGR 533
Query: 334 ERSVQKIPGCS 344
+ ++K P S
Sbjct: 534 DLRLKKTPAMS 544
Score = 117 bits (292), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 85/312 (27%), Positives = 147/312 (47%), Gaps = 48/312 (15%)
Query: 1 MPQRNVASWNAMLCGFVKDG-------------------DLSSARGVFDAMPEKNV---- 37
MP R++ +WN+M+ V G D + +F A E V
Sbjct: 61 MPNRHIVTWNSMISSHVSRGKTKEAIELYSNMLFEGVLPDAYTFSAIFKAFSEMGVSREG 120
Query: 38 ---------VSF--------TTMIDGYAKAGDMAAARFLFEQATEKDVVAWSALISGYVQ 80
+ F T ++D YAK G M ARF+F++ +KDVV ++ALI GY Q
Sbjct: 121 QKAHGLAVVLGFEVSDGFVATGIVDMYAKFGKMKDARFVFDRVLDKDVVLFTALIVGYNQ 180
Query: 81 NGQPNQALKVFLEMESKNVKPDEFILVSLMSATSQLGHLELAQWVDSYVSKSSIDLQQDH 140
+G +AL+VF +M +KP+E+ L S++ + LG L + + V K + +
Sbjct: 181 HGLDGEALEVFEDMVGSRIKPNEYTLASVLVSCGNLGDLVNGKLIHGLVVKYGL----ES 236
Query: 141 VIA---ALLDMNAKCGNMDRALKLFKEMPKRDLVSYCSMIQGLSIHGCGEDAVRLFNSML 197
V+A +LL M +KC ++ ++K+F + V++ S I GL +G E A+ +F M+
Sbjct: 237 VVASQTSLLTMYSKCNMVEDSIKVFNSLAYASHVTWTSFIVGLVQNGREEVALSMFREMM 296
Query: 198 MEGLVPDEVAFTIILTACSHSGLVDEGWNYFQSMKQKYGISPSPDHFACMVDLLSRSGHL 257
+ P+ + IL ACS +++ G ++ K G+ + A ++ L + G++
Sbjct: 297 RCSISPNHFTLSSILHACSSLAMLEAG-EQIHAVTVKLGVDGNKFVDAALIHLYGKCGNV 355
Query: 258 GDAYELMKSMHE 269
A + S+ E
Sbjct: 356 EKARSVFDSLTE 367
Score = 95.1 bits (235), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 55/237 (23%), Positives = 112/237 (47%), Gaps = 1/237 (0%)
Query: 43 MIDGYAKAGDMAAARFLFEQATEKDVVAWSALISGYVQNGQPNQALKVFLEMESKNVKPD 102
+IDGY K + AR LF++ + +V W+++IS +V G+ +A++++ M + V PD
Sbjct: 41 LIDGYIKCSVITEARKLFDEMPNRHIVTWNSMISSHVSRGKTKEAIELYSNMLFEGVLPD 100
Query: 103 EFILVSLMSATSQLGHLELAQWVDSYVSKSSIDLQQDHVIAALLDMNAKCGNMDRALKLF 162
+ ++ A S++G Q ++ V ++DM AK G M A +F
Sbjct: 101 AYTFSAIFKAFSEMGVSREGQKAHGLAVVLGFEVSDGFVATGIVDMYAKFGKMKDARFVF 160
Query: 163 KEMPKRDLVSYCSMIQGLSIHGCGEDAVRLFNSMLMEGLVPDEVAFTIILTACSHSGLVD 222
+ +D+V + ++I G + HG +A+ +F M+ + P+E +L +C + G +
Sbjct: 161 DRVLDKDVVLFTALIVGYNQHGLDGEALEVFEDMVGSRIKPNEYTLASVLVSCGNLGDLV 220
Query: 223 EGWNYFQSMKQKYGISPSPDHFACMVDLLSRSGHLGDAYELMKSMHEPHAGAWGALL 279
G + KYG+ ++ + S+ + D+ ++ S+ W + +
Sbjct: 221 NG-KLIHGLVVKYGLESVVASQTSLLTMYSKCNMVEDSIKVFNSLAYASHVTWTSFI 276
>Medtr1g040535.1 | pentatricopeptide (PPR) repeat protein | LC |
chr1:15006779-15004629 | 20130731
Length = 675
Score = 191 bits (486), Expect = 7e-49, Method: Compositional matrix adjust.
Identities = 113/344 (32%), Positives = 185/344 (53%), Gaps = 40/344 (11%)
Query: 10 NAMLCGFVKDGDLSSARGVFDAMPEKNVVSFTTMIDGYAKAGDMAAARFLFEQATEKDVV 69
N ++ + K GD+ +A+ VFD+M ++N +S+T+++ GY G A +F++ ++ +
Sbjct: 239 NCLIDMYSKSGDVDTAQVVFDSMSKRNAISWTSLLTGYGMHGCSEDAFRVFDEMRKEALS 298
Query: 70 -----AWSALISGYVQNGQPNQALKVFLEMESKN--VKPDEFILVSLMSATSQLGHLELA 122
+W+ + G N AL++F EM + + P++F + ++ + ++L L+
Sbjct: 299 FGNGGSWNRFVXG-----DANHALQLFSEMFKIDNCIVPNDFTISCVLMSCARLSALKFG 353
Query: 123 QWVDSYVSKSSIDLQQDHVIA-ALLDMNAKCGNMDRALKLFKEMPKRDLVSYCSMIQGLS 181
+ + ++V + S +A L+DM +K G++D A +F M KR+ VS+ S++ G
Sbjct: 354 KQIHAHVLRRSHSNSDVLFVANCLIDMYSKSGDVDTAQVVFDSMSKRNAVSWTSLLTGYG 413
Query: 182 IHGCGEDAVRLFNSMLMEGLVPDEVAFTIILTACSHSGLVDEGWNYFQSMKQKYGISPSP 241
+HG EDA R+F+ M E LV D + F ++L AC H
Sbjct: 414 MHGRSEDAFRVFDEMRKEALVLDGITFLVVLYACKH------------------------ 449
Query: 242 DHFACMVDLLSRSGHLGDAYELMKSMH-EPHAGAWGALLGACKLHGDSDLGEIVANQLFE 300
+ACMVDLL R+G LG+A L+ M EP W ALL AC++H + +L E A +L E
Sbjct: 450 --YACMVDLLGRAGRLGEAMRLINDMPIEPTPVVWIALLSACRIHSNEELAEFAAKKLLE 507
Query: 301 LEPQNAANYILLSNIYAAAERWIDVSLVRSRMRERSVQKIPGCS 344
L+ N Y LLSNIYA A RW DV+ + M+ ++KIPG S
Sbjct: 508 LKADNDGTYTLLSNIYANARRWKDVARIGYLMKRTGIKKIPGWS 551
Score = 122 bits (306), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 89/285 (31%), Positives = 151/285 (52%), Gaps = 19/285 (6%)
Query: 22 LSSARGVFDAMPEKNVVSFTTMIDGYAKAGDMAAARFLF----EQATEKDVVAWSALISG 77
+ A V++ M K+VV++ M+ GY++ G A LF E+ E DVV WS++ISG
Sbjct: 1 MEDASKVYERMRFKDVVTWNAMVTGYSQNGRFEDALSLFGKMREEIIELDVVTWSSVISG 60
Query: 78 YVQNGQPNQALKVFLEMESKNVKPDEFILVSLMSATSQLGHLELAQWVDSYVSKSSIDLQ 137
Y Q G +A+ VF +M +P+ L+SL+SA + +G L + Y K L+
Sbjct: 61 YAQRGFGCEAMDVFRKMCGCRCRPNVVKLMSLLSACASVGALLHGKETHCYSVK--FILK 118
Query: 138 QDH--------VIAALLDMNAKCGNMDRALKLFKEM-PK-RDLVSYCSMIQGLSIHGCGE 187
+H VI AL+DM AKC +++ A +F E+ PK RD+V++ MI G + +G
Sbjct: 119 GEHNDDNDDLAVINALIDMYAKCKSLEVARAMFDEICPKDRDVVTWTVMIGGYAQYGDAN 178
Query: 188 DAVRLFNSMLM--EGLVPDEVAFTIILTACSHSGLVDEGWNYFQSMKQKYGISPSPDHFA 245
A++LF+ M +VP++ + +L +C+ + G + + ++ I A
Sbjct: 179 HALQLFSEMFKFDNCIVPNDFTISCVLMSCARLSALIFGKHIHAYVLRRSLIYSDVLFVA 238
Query: 246 -CMVDLLSRSGHLGDAYELMKSMHEPHAGAWGALLGACKLHGDSD 289
C++D+ S+SG + A + SM + +A +W +LL +HG S+
Sbjct: 239 NCLIDMYSKSGDVDTAQVVFDSMSKRNAISWTSLLTGYGMHGCSE 283
Score = 120 bits (302), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 77/286 (26%), Positives = 141/286 (49%), Gaps = 39/286 (13%)
Query: 43 MIDGYAKAGDMAAARFLFEQAT--EKDVVAWSALISGYVQNGQPNQALKVFLEMESKN-- 98
+ID YAK + AR +F++ ++DVV W+ +I GY Q G N AL++F EM +
Sbjct: 134 LIDMYAKCKSLEVARAMFDEICPKDRDVVTWTVMIGGYAQYGDANHALQLFSEMFKFDNC 193
Query: 99 VKPDEFILVSLMSATSQLGHLELAQWVDSYVSKSSIDLQQDHVIA-ALLDMNAKCGNMDR 157
+ P++F + ++ + ++L L + + +YV + S+ +A L+DM +K G++D
Sbjct: 194 IVPNDFTISCVLMSCARLSALIFGKHIHAYVLRRSLIYSDVLFVANCLIDMYSKSGDVDT 253
Query: 158 ALKLFKEMPKRDLVSYCSMIQGLSIHGCGEDAVRLFNSMLMEGL---------------- 201
A +F M KR+ +S+ S++ G +HGC EDA R+F+ M E L
Sbjct: 254 AQVVFDSMSKRNAISWTSLLTGYGMHGCSEDAFRVFDEMRKEALSFGNGGSWNRFVXGDA 313
Query: 202 -----------------VPDEVAFTIILTACSHSGLVDEGWN-YFQSMKQKYGISPSPDH 243
VP++ + +L +C+ + G + +++ + S
Sbjct: 314 NHALQLFSEMFKIDNCIVPNDFTISCVLMSCARLSALKFGKQIHAHVLRRSHSNSDVLFV 373
Query: 244 FACMVDLLSRSGHLGDAYELMKSMHEPHAGAWGALLGACKLHGDSD 289
C++D+ S+SG + A + SM + +A +W +LL +HG S+
Sbjct: 374 ANCLIDMYSKSGDVDTAQVVFDSMSKRNAVSWTSLLTGYGMHGRSE 419
>Medtr8g035960.1 | PPR containing plant-like protein | HC |
chr8:13156718-13159093 | 20130731
Length = 791
Score = 191 bits (484), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 115/343 (33%), Positives = 184/343 (53%), Gaps = 14/343 (4%)
Query: 4 RNVASWNAMLCGFVKDGDLSSARGVFDAMPEKNVVSFTTMIDGYAKAGDMAAARFLFEQA 63
RN+ M+ G LSS E+NV + ++I YAK + ++ +FE+
Sbjct: 399 RNMVKEGLMVHGLCLKSCLSS---------EQNVSN--SLITMYAKFESIQESKKIFEEL 447
Query: 64 TEKDVVAWSALISGYVQNGQPNQALKVFLEMESKNVKPDEFILVSLMSATSQLGHLELAQ 123
+ ++W+ALISGY QNG +A FL K +KP+++ S+++A + + L
Sbjct: 448 NYQGTISWNALISGYAQNGLCKEAFLTFLS-AIKEIKPNQYTFGSVLNAIAAAEDISLKH 506
Query: 124 WVDSYVSKSSIDLQQDHVIA-ALLDMNAKCGNMDRALKLFKEMPKRDLVSYCSMIQGLSI 182
+ + L D +A ALLDM K GN++ + ++F E P++ S+ MI +
Sbjct: 507 GQRCHSHLIKLGLNTDPFVAGALLDMYGKRGNINESQRVFNETPEKTQFSWTGMISAYAR 566
Query: 183 HGCGEDAVRLFNSMLMEGLVPDEVAFTIILTACSHSGLVDEGWNYFQSMKQKYGISPSPD 242
HG E + L+ + EG D + F +L AC G+VD G F SM +K+ I P+P+
Sbjct: 567 HGDYESVMSLYKEIEREGSNLDSITFLSVLAACCRKGMVDVGHIIFDSMVKKHSIEPTPE 626
Query: 243 HFACMVDLLSRSGHLGDAYELMKSM-HEPHAGAWGALLGACKLHGDSDLGEIVANQLFEL 301
H++ MVD+L R G L +A ELM + P +LLG+CKLHG+ ++ E V + L ++
Sbjct: 627 HYSIMVDMLGRVGRLDEAEELMHQIPGGPGLSVLQSLLGSCKLHGNVEMAERVVDSLIQM 686
Query: 302 EPQNAANYILLSNIYAAAERWIDVSLVRSRMRERSVQKIPGCS 344
+P ++ Y+L++N+YA W V+ VR MR R V+K G S
Sbjct: 687 DPGSSGPYVLMANLYAEKGNWEKVAEVRKGMRGRGVKKEVGFS 729
Score = 75.9 bits (185), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 81/386 (20%), Positives = 164/386 (42%), Gaps = 53/386 (13%)
Query: 1 MPQRNVASWNAMLCGFVKDG---------------------DLSSARGVFDAMPEKNVVS 39
M R++ SWNAML G+ ++G D S G A +
Sbjct: 248 MTIRDLVSWNAMLSGYAQEGECYGLEAVLLFGNMVREGMLLDHVSLTGAISACGYTKNLE 307
Query: 40 FTTMIDG--------------------YAKAGDMAAARFLFEQATEKDVVAWSALISGYV 79
F I G Y+K + A+ +F+ + ++VV+W+ LIS
Sbjct: 308 FGKQIHGLAQKLGYGTHVAVCNVLISTYSKCKVLRDAKAVFQDMSARNVVSWTTLISIDE 367
Query: 80 QNGQPNQALKVFLEMESKNVKPDEFILVSLMSATSQLGHLELAQWVDSYVSKSSIDLQQD 139
+N + +F M V P++ + L+ A + ++ V KS + +Q+
Sbjct: 368 EN-----VVSLFNAMRVDGVYPNDVTFIGLLHAITIRNMVKEGLMVHGLCLKSCLSSEQN 422
Query: 140 HVIAALLDMNAKCGNMDRALKLFKEMPKRDLVSYCSMIQGLSIHGCGEDAVRLFNSMLME 199
V +L+ M AK ++ + K+F+E+ + +S+ ++I G + +G ++A F S + E
Sbjct: 423 -VSNSLITMYAKFESIQESKKIFEELNYQGTISWNALISGYAQNGLCKEAFLTFLSAIKE 481
Query: 200 GLVPDEVAFTIILTACSHSGLVD-EGWNYFQSMKQKYGISPSPDHFACMVDLLSRSGHLG 258
+ P++ F +L A + + + + S K G++ P ++D+ + G++
Sbjct: 482 -IKPNQYTFGSVLNAIAAAEDISLKHGQRCHSHLIKLGLNTDPFVAGALLDMYGKRGNIN 540
Query: 259 DAYELMKSMHEPHAGAWGALLGACKLHGDSDLGEIVANQLFELEPQNAANYILLSNIYAA 318
++ + E +W ++ A HGD + + ++ E E N + LS + A
Sbjct: 541 ESQRVFNETPEKTQFSWTGMISAYARHGDYESVMSLYKEI-EREGSNLDSITFLSVLAAC 599
Query: 319 AER-WIDVS--LVRSRMRERSVQKIP 341
+ +DV + S +++ S++ P
Sbjct: 600 CRKGMVDVGHIIFDSMVKKHSIEPTP 625
Score = 75.9 bits (185), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 66/266 (24%), Positives = 129/266 (48%), Gaps = 18/266 (6%)
Query: 43 MIDGYAKAGDMAAARFLFEQATEKDVVAWSALISGYVQNGQPN--QALKVFLEMESKNVK 100
++ Y++ G + A +F + T +D+V+W+A++SGY Q G+ +A+ +F M + +
Sbjct: 228 LVTMYSRWGGLDEAGRVFNEMTIRDLVSWNAMLSGYAQEGECYGLEAVLLFGNMVREGML 287
Query: 101 PDEFILVSLMSATSQLGHLELAQWVDSYVSKSSIDLQQDHVIAALLDMNAKCGNMDRALK 160
D L +SA +LE + + K V L+ +KC + A
Sbjct: 288 LDHVSLTGAISACGYTKNLEFGKQIHGLAQKLGYGTHVA-VCNVLISTYSKCKVLRDAKA 346
Query: 161 LFKEMPKRDLVSYCSMIQGLSIHGCGEDAVRLFNSMLMEGLVPDEVAFTIILTACSHSGL 220
+F++M R++VS+ ++I SI E+ V LFN+M ++G+ P++V F +L A + +
Sbjct: 347 VFQDMSARNVVSWTTLI---SID--EENVVSLFNAMRVDGVYPNDVTFIGLLHAITIRNM 401
Query: 221 VDEGWNYFQSMKQKYGISPSPDHFACMVDLLSRSGHLGDAYELMKSMHEPHAGAWGALL- 279
V EG + K +S + ++ + ++ + ++ ++ + ++ +W AL+
Sbjct: 402 VKEGL-MVHGLCLKSCLSSEQNVSNSLITMYAKFESIQESKKIFEELNYQGTISWNALIS 460
Query: 280 -----GACK---LHGDSDLGEIVANQ 297
G CK L S + EI NQ
Sbjct: 461 GYAQNGLCKEAFLTFLSAIKEIKPNQ 486
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 63/246 (25%), Positives = 114/246 (46%), Gaps = 12/246 (4%)
Query: 41 TTMIDGYAKAGDMAAARFLFEQATEKDVVAWSALISGYVQNGQPNQALKVFLEMESKNVK 100
+++ Y KAG A +FE + D+V+W+ ++SG+ ++ AL M V
Sbjct: 123 NSLMKMYCKAGRFELALCVFEGLSCPDIVSWNTILSGFEKS---VDALNFACFMHLNGVV 179
Query: 101 PDEFILVSLMSATSQLGHLE-----LAQWVDSYVSKSSIDLQQDHVIAALLDMNAKCGNM 155
D + +S + + + S V K + + AL+ M ++ G +
Sbjct: 180 FDPVTYTTALSFCWDRDYWDDHGFLFGLQLHSLVVKCGFGCEV-FIGNALVTMYSRWGGL 238
Query: 156 DRALKLFKEMPKRDLVSYCSMIQGLSIHG-C-GEDAVRLFNSMLMEGLVPDEVAFTIILT 213
D A ++F EM RDLVS+ +M+ G + G C G +AV LF +M+ EG++ D V+ T ++
Sbjct: 239 DEAGRVFNEMTIRDLVSWNAMLSGYAQEGECYGLEAVLLFGNMVREGMLLDHVSLTGAIS 298
Query: 214 ACSHSGLVDEGWNYFQSMKQKYGISPSPDHFACMVDLLSRSGHLGDAYELMKSMHEPHAG 273
AC ++ ++ G + QK G ++ S+ L DA + + M +
Sbjct: 299 ACGYTKNLEFG-KQIHGLAQKLGYGTHVAVCNVLISTYSKCKVLRDAKAVFQDMSARNVV 357
Query: 274 AWGALL 279
+W L+
Sbjct: 358 SWTTLI 363
>Medtr2g048855.1 | pentatricopeptide (PPR) repeat protein | HC |
chr2:21642144-21644166 | 20130731
Length = 625
Score = 190 bits (483), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 116/313 (37%), Positives = 177/313 (56%), Gaps = 12/313 (3%)
Query: 36 NVVSFTTMIDGYAKAGDMAAARFLFEQAT-EKDVVAWSALISGYVQNGQPNQALKVFLEM 94
NVV ++++D Y K G + +R +FE+ + EK+ V+W+A++ Y QN + L + E
Sbjct: 291 NVVVESSLLDMYGKCGCVRHSRIVFERLSDEKNNVSWTAMLGVYCQNKEYQNVLDLVRER 350
Query: 95 ESKNVKPDEFILVSLMSATSQLGHLELAQWVDS-YVSKSSIDLQQDHVI-AALLDMNAKC 152
N +L A S L + + V YV K +D +I +AL+D+ AKC
Sbjct: 351 GDLNFYAFGIVL----RACSGLAAVNHGKEVHCMYVRKGG---SKDVIIESALVDLYAKC 403
Query: 153 GNMDRALKLFKEMPKRDLVSYCSMIQGLSIHGCGEDAVRLFNSMLMEGLVPDEVAFTIIL 212
G +D A +F M R+L+++ SM+ G + +G G +A+ LF M+ EG+ PD + F +L
Sbjct: 404 GMVDFACTMFASMEVRNLITWNSMVSGFAQNGRGVEALALFEDMIKEGIKPDSITFVAVL 463
Query: 213 TACSHSGLVDEGWNYFQSMKQKYGISPSPDHFACMVDLLSRSGHLGDAYELMKSMHEPHA 272
ACSH+GLVDEG F M + YGI P +H+ CM+DLL R+G + +A L+++ +
Sbjct: 464 FACSHAGLVDEGRKVFTLMGE-YGIKPVVEHYNCMIDLLGRAGFIDEAECLLENADCRYD 522
Query: 273 GA-WGALLGACKLHGDSDLGEIVANQLFELEPQNAANYILLSNIYAAAERWIDVSLVRSR 331
+ W ALLGAC D E VA ++ ELEP +Y+LL+NIY RW D +R
Sbjct: 523 KSLWAALLGACTKCSDYRTAERVARKMIELEPDFHLSYVLLNNIYREVGRWDDALEIRKL 582
Query: 332 MRERSVQKIPGCS 344
M +R V+K+ G S
Sbjct: 583 MEDRGVKKMAGKS 595
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 57/174 (32%), Positives = 99/174 (56%), Gaps = 3/174 (1%)
Query: 53 MAAARFLFEQATEKDVVAWSALISGYVQNGQPNQALKVFLEMESKNVKPDEFILVSLMSA 112
++ AR LF+ KDV++W++LISGY ++ P+Q++ +F EM + V+P+ F L S++ A
Sbjct: 104 LSHARHLFDSLHVKDVISWTSLISGYTRSDLPHQSISLFYEMLAFPVQPNAFTLSSVIKA 163
Query: 113 TSQLGHLELAQWVDSYVSKSSIDLQQDHVIAALLDMNAKCGNMDRALKLFKEM-PKRDLV 171
S L + L + S V D V +L+DM +D A ++F E+ K D+
Sbjct: 164 CSALNDVNLGRCFHSMVLTRGFDWNTV-VSCSLIDMYGWNRAVDDARRVFDELFVKDDVF 222
Query: 172 SYCSMIQGLSIHGCGEDAVRLFNSM-LMEGLVPDEVAFTIILTACSHSGLVDEG 224
+ S+I + + +++++ F M + G+VPD F ILTAC++ GL+ +G
Sbjct: 223 CWTSIISCFTRNDMFKESLKFFYVMNRVRGVVPDGYTFGTILTACANLGLLRQG 276
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 33/124 (26%), Positives = 70/124 (56%), Gaps = 1/124 (0%)
Query: 35 KNVVSFTTMIDGYAKAGDMAAARFLFEQATEKDVVAWSALISGYVQNGQPNQALKVFLEM 94
K+V+ + ++D YAK G + A +F ++++ W++++SG+ QNG+ +AL +F +M
Sbjct: 388 KDVIIESALVDLYAKCGMVDFACTMFASMEVRNLITWNSMVSGFAQNGRGVEALALFEDM 447
Query: 95 ESKNVKPDEFILVSLMSATSQLGHLELAQWVDSYVSKSSIDLQQDHVIAALLDMNAKCGN 154
+ +KPD V+++ A S G ++ + V + + + I +H ++D+ + G
Sbjct: 448 IKEGIKPDSITFVAVLFACSHAGLVDEGRKVFTLMGEYGIKPVVEH-YNCMIDLLGRAGF 506
Query: 155 MDRA 158
+D A
Sbjct: 507 IDEA 510
>Medtr5g071190.1 | PPR containing plant-like protein | HC |
chr5:30193271-30196237 | 20130731
Length = 887
Score = 190 bits (482), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 106/327 (32%), Positives = 184/327 (56%), Gaps = 11/327 (3%)
Query: 1 MPQRNVASWNAMLCGFVKDGDLSSARGVFDAMPEK----NVVSFTTMIDGYAKAGDMAAA 56
M +R+V SWN+++ G+ + G A +F M E N++++ MI GY ++G A
Sbjct: 415 MSERDVYSWNSIIGGYFQAGFCGKAHELFMKMQESDSPPNIITWNIMITGYMQSGAEDQA 474
Query: 57 RFLFEQ-----ATEKDVVAWSALISGYVQNGQPNQALKVFLEMESKNVKPDEFILVSLMS 111
LF+ T+++ +W++LISG+VQ+GQ ++AL++F M+ ++ P+ ++S++
Sbjct: 475 LDLFKSIEKDGKTKRNAASWNSLISGFVQSGQKDKALQIFRNMQFCHILPNSVTILSILP 534
Query: 112 ATSQLGHLELAQWVDSYVSKSSIDLQQDHVIAALLDMNAKCGNMDRALKLFKEMPKRDLV 171
+ L + + + + + I + + V L+D AK GN+ + +F E+ +D V
Sbjct: 535 VCANLVASKKVKEIHCFAVRR-ILVSELSVSNLLIDSYAKSGNLMYSKNIFNELSWKDAV 593
Query: 172 SYCSMIQGLSIHGCGEDAVRLFNSMLMEGLVPDEVAFTIILTACSHSGLVDEGWNYFQSM 231
S+ SM+ +HGC E A+ LF M +GL P+ F IL A H+G+VDEG + F +
Sbjct: 594 SWNSMLSSYVLHGCSESALDLFYQMRKQGLQPNRGTFASILLAYGHAGMVDEGKSVFSCI 653
Query: 232 KQKYGISPSPDHFACMVDLLSRSGHLGDAYELMKSMH-EPHAGAWGALLGACKLHGDSDL 290
+ Y + +H++ MV LL RSG L +A + ++SM EP++ WGALL AC++H + +
Sbjct: 654 TKDYLVRQGMEHYSAMVYLLGRSGKLAEALDFIQSMPIEPNSSVWGALLTACRIHRNFGV 713
Query: 291 GEIVANQLFELEPQNAANYILLSNIYA 317
+ ++ E EP N LLS Y+
Sbjct: 714 AVLAGKRMLEFEPGNNITRHLLSQAYS 740
Score = 108 bits (269), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 67/235 (28%), Positives = 124/235 (52%), Gaps = 4/235 (1%)
Query: 35 KNVVSF--TTMIDGYAKAGDMAAARFLFEQATEKDVVAWSALISGYVQNGQPNQALKVFL 92
+NV F T ++ YAK G + AR +F + + +++ WSA+I G +N + + +F
Sbjct: 113 ENVNPFVETKLVSMYAKCGLLGMARKVFNEMSVRNLFTWSAMIGGCSRNKSWGEVVGLFY 172
Query: 93 EMESKNVKPDEFILVSLMSATSQLGHLELAQWVDSYVSKSSIDLQQDHVIAALLDMNAKC 152
M V PDEF+L ++ A + LE + + S V + + + H+ +++ + AKC
Sbjct: 173 AMMRDGVLPDEFLLPKVLQACGKCRDLETGRLIHSMVIRRGMRWSK-HLRNSIMAVYAKC 231
Query: 153 GNMDRALKLFKEMPKRDLVSYCSMIQGLSIHGCGEDAVRLFNSMLMEGLVPDEVAFTIIL 212
G MD A K+F M +RD V++ +MI G +G A + F++M +G+ P V + I++
Sbjct: 232 GEMDCAKKIFDCMDERDSVAWNAMISGFCQNGEIGQAQKYFDAMQKDGVEPSLVTWNILI 291
Query: 213 TACSHSGLVDEGWNYFQSMKQKYGISPSPDHFACMVDLLSRSGHLGDAYELMKSM 267
+ + G D + + M + +GI+P + M+ ++ G + A +L+K M
Sbjct: 292 SCYNQLGHCDLAIDLMRKM-EWFGIAPDVYTWTSMISGFTQKGRISHALDLLKEM 345
Score = 103 bits (258), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 76/281 (27%), Positives = 138/281 (49%), Gaps = 13/281 (4%)
Query: 1 MPQRNVASWNAMLCGFVKDGDLSSARGVFDAMP----EKNVVSFTTMIDGYAKAGDMAAA 56
M +R+ +WNAM+ GF ++G++ A+ FDAM E ++V++ +I Y + G A
Sbjct: 244 MDERDSVAWNAMISGFCQNGEIGQAQKYFDAMQKDGVEPSLVTWNILISCYNQLGHCDLA 303
Query: 57 RFLFEQ----ATEKDVVAWSALISGYVQNGQPNQALKVFLEMESKNVKPDEFILVSLMSA 112
L + DV W+++ISG+ Q G+ + AL + EM V+ + + S SA
Sbjct: 304 IDLMRKMEWFGIAPDVYTWTSMISGFTQKGRISHALDLLKEMFLAGVEANNITIASAASA 363
Query: 113 TSQLGHLELAQWVDSYVSKSSIDLQQDHVIA--ALLDMNAKCGNMDRALKLFKEMPKRDL 170
+ L L + + S K ++ D+V+ +L+DM KCG++ A +F M +RD+
Sbjct: 364 CAALKSLSMGLEIHSIAVKMNL---VDNVLVGNSLIDMYCKCGDLKAAQHIFDMMSERDV 420
Query: 171 VSYCSMIQGLSIHGCGEDAVRLFNSMLMEGLVPDEVAFTIILTACSHSGLVDEGWNYFQS 230
S+ S+I G G A LF M P+ + + I++T SG D+ + F+S
Sbjct: 421 YSWNSIIGGYFQAGFCGKAHELFMKMQESDSPPNIITWNIMITGYMQSGAEDQALDLFKS 480
Query: 231 MKQKYGISPSPDHFACMVDLLSRSGHLGDAYELMKSMHEPH 271
+++ + + ++ +SG A ++ ++M H
Sbjct: 481 IEKDGKTKRNAASWNSLISGFVQSGQKDKALQIFRNMQFCH 521
Score = 75.9 bits (185), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 63/235 (26%), Positives = 103/235 (43%), Gaps = 33/235 (14%)
Query: 47 YAKAGDMAAARFLFEQATEKDVVAWSALISGYVQNGQPNQALKVFLEMESKNVKPDEFIL 106
YAK G+M A+ +F+ E+D VAW+A+ISG+ QNG+ QA K F M+ V+P
Sbjct: 228 YAKCGEMDCAKKIFDCMDERDSVAWNAMISGFCQNGEIGQAQKYFDAMQKDGVEPSLVTW 287
Query: 107 VSLMSATSQLGHLELAQWVDSYVSKSSIDLQQDHVIAALLDMNAKCGNMDRALKLFKEMP 166
L+S +QLGH +LA IDL R ++ F P
Sbjct: 288 NILISCYNQLGHCDLA-----------IDLM-------------------RKMEWFGIAP 317
Query: 167 KRDLVSYCSMIQGLSIHGCGEDAVRLFNSMLMEGLVPDEVAFTIILTACSHSGLVDEGWN 226
D+ ++ SMI G + G A+ L M + G+ + + +AC+ + G
Sbjct: 318 --DVYTWTSMISGFTQKGRISHALDLLKEMFLAGVEANNITIASAASACAALKSLSMGLE 375
Query: 227 YFQSMKQKYGISPSPDHFACMVDLLSRSGHLGDAYELMKSMHEPHAGAWGALLGA 281
S+ K + + ++D+ + G L A + M E +W +++G
Sbjct: 376 -IHSIAVKMNLVDNVLVGNSLIDMYCKCGDLKAAQHIFDMMSERDVYSWNSIIGG 429
Score = 75.5 bits (184), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 63/262 (24%), Positives = 119/262 (45%), Gaps = 48/262 (18%)
Query: 36 NVVSFTTMIDGYAKAGDMAAARFLFEQATEKDVVAWSALISGYVQNGQPNQALKVFLEME 95
NV+ ++ID Y K GD+ AA+ +F+ +E+DV +W+++I GY Q G +A ++F++M+
Sbjct: 388 NVLVGNSLIDMYCKCGDLKAAQHIFDMMSERDVYSWNSIIGGYFQAGFCGKAHELFMKMQ 447
Query: 96 SKNVKPDEFILVSLMSATSQLGHLELAQWVDSYVSKSSIDLQQDHVIAALLDMNAKCGNM 155
+ P+ I ++M + Y+ + G
Sbjct: 448 ESDSPPN-IITWNIM--------------ITGYM---------------------QSGAE 471
Query: 156 DRALKLFKEM-----PKRDLVSYCSMIQGLSIHGCGEDAVRLFNSMLMEGLVPDEVAFTI 210
D+AL LFK + KR+ S+ S+I G G + A+++F +M ++P+ V
Sbjct: 472 DQALDLFKSIEKDGKTKRNAASWNSLISGFVQSGQKDKALQIFRNMQFCHILPNSVTILS 531
Query: 211 ILTACSH---SGLVDEGWNYFQSMKQKYGISPSPDHFACMVDLLSRSGHLGDAYELMKSM 267
IL C++ S V E + + ++D ++SG+L + + +
Sbjct: 532 ILPVCANLVASKKVKE----IHCFAVRRILVSELSVSNLLIDSYAKSGNLMYSKNIFNEL 587
Query: 268 HEPHAGAWGALLGACKLHGDSD 289
A +W ++L + LHG S+
Sbjct: 588 SWKDAVSWNSMLSSYVLHGCSE 609
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 43/144 (29%), Positives = 74/144 (51%), Gaps = 2/144 (1%)
Query: 141 VIAALLDMNAKCGNMDRALKLFKEMPKRDLVSYCSMIQGLSIHGCGEDAVRLFNSMLMEG 200
V L+ M AKCG + A K+F EM R+L ++ +MI G S + + V LF +M+ +G
Sbjct: 119 VETKLVSMYAKCGLLGMARKVFNEMSVRNLFTWSAMIGGCSRNKSWGEVVGLFYAMMRDG 178
Query: 201 LVPDEVAFTIILTACSHSGLVDEGWNYFQSMKQKYGISPSPDHFACMVDLLSRSGHLGDA 260
++PDE +L AC ++ G SM + G+ S ++ + ++ G + A
Sbjct: 179 VLPDEFLLPKVLQACGKCRDLETG-RLIHSMVIRRGMRWSKHLRNSIMAVYAKCGEMDCA 237
Query: 261 YELMKSMHEPHAGAWGALL-GACK 283
++ M E + AW A++ G C+
Sbjct: 238 KKIFDCMDERDSVAWNAMISGFCQ 261
>Medtr5g031490.1 | pentatricopeptide (PPR) repeat protein | HC |
chr5:13515619-13513589 | 20130731
Length = 676
Score = 190 bits (482), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 102/311 (32%), Positives = 172/311 (55%), Gaps = 1/311 (0%)
Query: 34 EKNVVSFTTMIDGYAKAGDMAAARFLFEQATEKDVVAWSALISGYVQNGQPNQALKVFLE 93
E V S T+++ Y+K + + +F V W++ I G VQNG+ AL +F E
Sbjct: 235 ESVVASQTSLLTMYSKCNMVEDSIKVFNSLAYASHVTWTSFIVGLVQNGREEIALSMFRE 294
Query: 94 MESKNVKPDEFILVSLMSATSQLGHLELAQWVDSYVSKSSIDLQQDHVIAALLDMNAKCG 153
M ++ P+ F S++ A S L LE + + + K +D +V AAL+ + KCG
Sbjct: 295 MIRCSISPNHFTFSSILHACSSLAMLEAGEQIHAVTVKLGVD-GNKYVDAALIHLYGKCG 353
Query: 154 NMDRALKLFKEMPKRDLVSYCSMIQGLSIHGCGEDAVRLFNSMLMEGLVPDEVAFTIILT 213
N+++A +F+ + + D+VS +MI + +G G +A+ LF M G P+ V F IL
Sbjct: 354 NVEKARSVFESLTELDVVSINTMIYAYAQNGFGHEALELFERMKKLGHKPNVVTFISILL 413
Query: 214 ACSHSGLVDEGWNYFQSMKQKYGISPSPDHFACMVDLLSRSGHLGDAYELMKSMHEPHAG 273
AC+++GLV+EG F ++ + I + DH+ CM+DLL R+ +A L++ P
Sbjct: 414 ACNNAGLVEEGCQIFSLIRNNHSIELTRDHYTCMIDLLGRAKRFEEAAMLIEEGKNPDVI 473
Query: 274 AWGALLGACKLHGDSDLGEIVANQLFELEPQNAANYILLSNIYAAAERWIDVSLVRSRMR 333
W LL ACK+HG+ ++ E ++ + P++ +ILL+NIYA+A +W +V ++S R
Sbjct: 474 QWRTLLNACKIHGEVEMAEKFMKKMLDQAPRDGGTHILLTNIYASAGKWDNVIEMKSAGR 533
Query: 334 ERSVQKIPGCS 344
+ ++K P S
Sbjct: 534 DLRLKKTPAMS 544
Score = 122 bits (307), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 86/312 (27%), Positives = 150/312 (48%), Gaps = 48/312 (15%)
Query: 1 MPQRNVASWNAMLCGFVKDGDLSSARGVFDAMPEKNVV----SF---------------- 40
MP R++ +WN+M+ V G A ++D M + V+ +F
Sbjct: 61 MPNRHIVTWNSMISSHVSRGKTKEAIELYDNMLFEGVLPDAYTFSAIFKAFSEMGVSREG 120
Query: 41 --------------------TTMIDGYAKAGDMAAARFLFEQATEKDVVAWSALISGYVQ 80
T ++D YAK G M ARF+F++ +KDVV ++ALI GY Q
Sbjct: 121 QKAHGLAVVLGFEVSDGFVATGIVDMYAKFGKMKDARFVFDRVLDKDVVLFTALIVGYNQ 180
Query: 81 NGQPNQALKVFLEMESKNVKPDEFILVSLMSATSQLGHLELAQWVDSYVSKSSIDLQQDH 140
G +AL+VF +M +KP+E+ L S++ + LG L + + V KS + +
Sbjct: 181 RGLDGEALEVFEDMVGSRIKPNEYTLASVLVSCGNLGDLVNGKLIHGLVVKSGL----ES 236
Query: 141 VIA---ALLDMNAKCGNMDRALKLFKEMPKRDLVSYCSMIQGLSIHGCGEDAVRLFNSML 197
V+A +LL M +KC ++ ++K+F + V++ S I GL +G E A+ +F M+
Sbjct: 237 VVASQTSLLTMYSKCNMVEDSIKVFNSLAYASHVTWTSFIVGLVQNGREEIALSMFREMI 296
Query: 198 MEGLVPDEVAFTIILTACSHSGLVDEGWNYFQSMKQKYGISPSPDHFACMVDLLSRSGHL 257
+ P+ F+ IL ACS +++ G ++ K G+ + A ++ L + G++
Sbjct: 297 RCSISPNHFTFSSILHACSSLAMLEAG-EQIHAVTVKLGVDGNKYVDAALIHLYGKCGNV 355
Query: 258 GDAYELMKSMHE 269
A + +S+ E
Sbjct: 356 EKARSVFESLTE 367
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 53/237 (22%), Positives = 110/237 (46%), Gaps = 1/237 (0%)
Query: 43 MIDGYAKAGDMAAARFLFEQATEKDVVAWSALISGYVQNGQPNQALKVFLEMESKNVKPD 102
+IDGY K + AR LF++ + +V W+++IS +V G+ +A++++ M + V PD
Sbjct: 41 LIDGYIKCSVITEARKLFDEMPNRHIVTWNSMISSHVSRGKTKEAIELYDNMLFEGVLPD 100
Query: 103 EFILVSLMSATSQLGHLELAQWVDSYVSKSSIDLQQDHVIAALLDMNAKCGNMDRALKLF 162
+ ++ A S++G Q ++ V ++DM AK G M A +F
Sbjct: 101 AYTFSAIFKAFSEMGVSREGQKAHGLAVVLGFEVSDGFVATGIVDMYAKFGKMKDARFVF 160
Query: 163 KEMPKRDLVSYCSMIQGLSIHGCGEDAVRLFNSMLMEGLVPDEVAFTIILTACSHSGLVD 222
+ +D+V + ++I G + G +A+ +F M+ + P+E +L +C + G +
Sbjct: 161 DRVLDKDVVLFTALIVGYNQRGLDGEALEVFEDMVGSRIKPNEYTLASVLVSCGNLGDLV 220
Query: 223 EGWNYFQSMKQKYGISPSPDHFACMVDLLSRSGHLGDAYELMKSMHEPHAGAWGALL 279
G + K G+ ++ + S+ + D+ ++ S+ W + +
Sbjct: 221 NG-KLIHGLVVKSGLESVVASQTSLLTMYSKCNMVEDSIKVFNSLAYASHVTWTSFI 276
>Medtr5g018370.1 | PPR containing plant-like protein | HC |
chr5:6845861-6848150 | 20130731
Length = 714
Score = 187 bits (475), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 120/389 (30%), Positives = 200/389 (51%), Gaps = 50/389 (12%)
Query: 1 MPQRNVASWNAMLCGFVKDGD--------------------------LSSARGVFDAMPE 34
M + ++ SWN+M+ G+ ++ D + SA G F
Sbjct: 276 MEKWDLVSWNSMISGYFENEDGEKAMNLFVQLKALCFPKPDDYTYAGIISATGAFPCFSY 335
Query: 35 --------------KNVVSFTTMIDGYAKAGDMAAARFLFEQATEKDVVAWSALISGYVQ 80
++V +T++ Y K + AA +F KD + W+ +I+GY +
Sbjct: 336 GKPLHGQVIKAGFVRSVFVGSTLVSMYFKNQETEAALRVFCSIPGKDAILWTEMITGYSK 395
Query: 81 NGQPNQALKVFLEMESKNVKPDEFILVSLMSATSQLGHLELAQWVDSYVSKSSIDLQQDH 140
A++ F EM + + D+++L ++S + L L + + Y K D++
Sbjct: 396 MADGMGAIRCFSEMHHEVHEIDDYVLSGVLSVCAYLAILRQGEIIHCYAYKLGYDVEMS- 454
Query: 141 VIAALLDMNAKCGNMDRALKLFKEMPKRDLVSYCSMIQGLSIHGCGEDAVRLFNSMLMEG 200
V +L+DM AK GN++ A +F ++ DL + SM+ G S HG +DA++LF ++ +G
Sbjct: 455 VSGSLIDMYAKNGNLEAAYLVFSQVSHPDLKCWNSMLGGFSHHGMVDDALKLFEEIIKQG 514
Query: 201 LVPDEVAFTIILTACSHSGLVDEG---WNYFQSMKQKYGISPSPDHFACMVDLLSRSGHL 257
LVPD+V F +L+ACSHS LV++G WNY S+ G+ P P H++CMV LLSR+ L
Sbjct: 515 LVPDQVTFLSLLSACSHSRLVEQGKLLWNYMSSI----GLVPGPKHYSCMVTLLSRAALL 570
Query: 258 GDAYELM-KSMH-EPHAGAWGALLGACKLHGDSDLGEIVANQLFELEPQNAANYILLSNI 315
+A E++ KS + E + W LL AC ++ + +G A ++ ++ ILLSN+
Sbjct: 571 EEAEEIINKSPYVEDNVELWRTLLSACVINKNLKVGVRAAEEVLRFNAEDGPTLILLSNL 630
Query: 316 YAAAERWIDVSLVRSRMRERSVQKIPGCS 344
YAAA RW +V+ +R M+ ++K PG S
Sbjct: 631 YAAAGRWDEVAEIRRNMKGLIMEKEPGLS 659
Score = 79.3 bits (194), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 58/182 (31%), Positives = 97/182 (53%), Gaps = 16/182 (8%)
Query: 41 TTMIDGYAKAGDMAAARFLFEQATEKDVVAWSALISGYVQNGQPNQALKVFLEMESKNVK 100
T++++ Y+ D+++A +F E+D VAW++LI GY++N + + + +F+EM
Sbjct: 153 TSLLNMYSSCMDLSSAESVFCDMNERDNVAWNSLILGYLKNDKIEKGVYLFIEMMWVGFT 212
Query: 101 PDEFILVSLMSATSQL-----GHLELAQWVDSYVSKSSIDLQQDHVIAALLDMNAKCGNM 155
P + ++SA S+L G L A+ + V S DL H+ AL+DM G+
Sbjct: 213 PTVYTFCMILSACSRLKDYFSGRLIHARVI---VGNVSPDL---HLQNALVDMYCNAGDT 266
Query: 156 DRALKLFKEMPKRDLVSYCSMIQGLSIHGCGEDAVRLFNSMLMEGLV---PDEVAFTIIL 212
A +F M K DLVS+ SMI G + GE A+ LF + ++ L PD+ + I+
Sbjct: 267 QTAYMIFSRMEKWDLVSWNSMISGYFENEDGEKAMNLF--VQLKALCFPKPDDYTYAGII 324
Query: 213 TA 214
+A
Sbjct: 325 SA 326