Miyakogusa Predicted Gene

Lj1g3v4719680.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v4719680.1 tr|B9HBX0|B9HBX0_POPTR Predicted protein
OS=Populus trichocarpa GN=POPTRDRAFT_561466 PE=4 SV=1,42.47,1e-16,PH
domain-like,NULL; SUBFAMILY NOT NAMED,NULL; TRANSCRIPTION FACTOR SMIF
(DECAPPING ENZYME DCP1),Dcp,CUFF.33043.1
         (356 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr7g105250.1 | mRNA-decapping enzyme-like protein | HC | chr7...   410   e-115
Medtr7g105250.2 | mRNA-decapping enzyme-like protein | HC | chr7...   410   e-115
Medtr2g086970.1 | mRNA-decapping enzyme-like protein | HC | chr2...   300   1e-81

>Medtr7g105250.1 | mRNA-decapping enzyme-like protein | HC |
           chr7:42666216-42670572 | 20130731
          Length = 348

 Score =  410 bits (1054), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 225/356 (63%), Positives = 251/356 (70%), Gaps = 12/356 (3%)

Query: 1   MSQ-KKLTPNLDRQSTKVLNLTVLRRMDPFIDEILFTAAHVSLYDFNIESNQWSRKNVEG 59
           MSQ KKLTPNLD+ STK+LNLTVL+RMDPFIDEILFTAAHVS YDFNIE+NQWSRK+VEG
Sbjct: 1   MSQTKKLTPNLDQHSTKMLNLTVLQRMDPFIDEILFTAAHVSFYDFNIETNQWSRKDVEG 60

Query: 60  SLFVVQRNPQVKPEFQFIVMNRRNTDNLKENLLDFEYELKKPYLLYRNAKQEVNGIWFYN 119
           SLFVV+RN Q  P FQFIVMNRRNTDNL ENLLDFEYELKKPYLLYRNA QEVNGIWFYN
Sbjct: 61  SLFVVKRNAQ--PRFQFIVMNRRNTDNLVENLLDFEYELKKPYLLYRNASQEVNGIWFYN 118

Query: 120 PDECEEVGNLFNRIIDEYPKAPPSTIMPSSNSEFEELEPVSII-RXXXXXXXXXXXXXNT 178
           P+ECEEV NLFNRI++ YPKA P+  M S+ SEFEE + VS I               + 
Sbjct: 119 PEECEEVANLFNRILNAYPKALPNATMSSNKSEFEEHDQVSAINESAIETSSAAVAATDA 178

Query: 179 PEDYVFINSLNASKVTGNYASSVESFGRPYHSATVTSTVPNGLFTPAPSVQIPXXXXXXX 238
            ED VF N  N  K+TG YAS+VESF +PYHSA+VTSTVP G  +P PS+QIP       
Sbjct: 179 VEDSVFTNFFNTCKITGPYASNVESFHQPYHSASVTSTVPGGFLSPVPSIQIP------- 231

Query: 239 XXXXETINIGNQVTKLVNPSTFLAXXXXXXXXXXXXXXXVPPNAAVHHPLILPNQYGTPV 298
               ETIN G QVT LV PSTFLA                 P+AAVHH   LP QYGTP+
Sbjct: 232 STSLETINSGTQVTNLVKPSTFLASNSLLPLIPPISSPMP-PSAAVHHTQNLPRQYGTPL 290

Query: 299 FQHFXXXXXXXXXXXXXXXXXXRPVISRDKVRDALLSLVQDDQFIDMVFQKLLKVN 354
            Q F                  RPVISRDKVRDAL+SLVQDD+FIDM+FQ LLK++
Sbjct: 291 LQPFPPPNPPSSLTPISSSMPNRPVISRDKVRDALVSLVQDDKFIDMMFQTLLKMH 346


>Medtr7g105250.2 | mRNA-decapping enzyme-like protein | HC |
           chr7:42666216-42671840 | 20130731
          Length = 348

 Score =  410 bits (1054), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 225/356 (63%), Positives = 251/356 (70%), Gaps = 12/356 (3%)

Query: 1   MSQ-KKLTPNLDRQSTKVLNLTVLRRMDPFIDEILFTAAHVSLYDFNIESNQWSRKNVEG 59
           MSQ KKLTPNLD+ STK+LNLTVL+RMDPFIDEILFTAAHVS YDFNIE+NQWSRK+VEG
Sbjct: 1   MSQTKKLTPNLDQHSTKMLNLTVLQRMDPFIDEILFTAAHVSFYDFNIETNQWSRKDVEG 60

Query: 60  SLFVVQRNPQVKPEFQFIVMNRRNTDNLKENLLDFEYELKKPYLLYRNAKQEVNGIWFYN 119
           SLFVV+RN Q  P FQFIVMNRRNTDNL ENLLDFEYELKKPYLLYRNA QEVNGIWFYN
Sbjct: 61  SLFVVKRNAQ--PRFQFIVMNRRNTDNLVENLLDFEYELKKPYLLYRNASQEVNGIWFYN 118

Query: 120 PDECEEVGNLFNRIIDEYPKAPPSTIMPSSNSEFEELEPVSII-RXXXXXXXXXXXXXNT 178
           P+ECEEV NLFNRI++ YPKA P+  M S+ SEFEE + VS I               + 
Sbjct: 119 PEECEEVANLFNRILNAYPKALPNATMSSNKSEFEEHDQVSAINESAIETSSAAVAATDA 178

Query: 179 PEDYVFINSLNASKVTGNYASSVESFGRPYHSATVTSTVPNGLFTPAPSVQIPXXXXXXX 238
            ED VF N  N  K+TG YAS+VESF +PYHSA+VTSTVP G  +P PS+QIP       
Sbjct: 179 VEDSVFTNFFNTCKITGPYASNVESFHQPYHSASVTSTVPGGFLSPVPSIQIP------- 231

Query: 239 XXXXETINIGNQVTKLVNPSTFLAXXXXXXXXXXXXXXXVPPNAAVHHPLILPNQYGTPV 298
               ETIN G QVT LV PSTFLA                 P+AAVHH   LP QYGTP+
Sbjct: 232 STSLETINSGTQVTNLVKPSTFLASNSLLPLIPPISSPMP-PSAAVHHTQNLPRQYGTPL 290

Query: 299 FQHFXXXXXXXXXXXXXXXXXXRPVISRDKVRDALLSLVQDDQFIDMVFQKLLKVN 354
            Q F                  RPVISRDKVRDAL+SLVQDD+FIDM+FQ LLK++
Sbjct: 291 LQPFPPPNPPSSLTPISSSMPNRPVISRDKVRDALVSLVQDDKFIDMMFQTLLKMH 346


>Medtr2g086970.1 | mRNA-decapping enzyme-like protein | HC |
           chr2:36491905-36497808 | 20130731
          Length = 366

 Score =  300 bits (769), Expect = 1e-81,   Method: Compositional matrix adjust.
 Identities = 179/370 (48%), Positives = 223/370 (60%), Gaps = 18/370 (4%)

Query: 1   MSQ-KKLTPNLDRQSTKVLNLTVLRRMDPFIDEILFTAAHVSLYDFNIESNQWSRKNVEG 59
           MSQ  KL PNLD+QSTK+LNLTVL+R+DPF++EIL TAAHV+ Y+FNI+ +QWSRK+VEG
Sbjct: 1   MSQNGKLMPNLDQQSTKLLNLTVLQRIDPFVEEILITAAHVTFYEFNIDLSQWSRKDVEG 60

Query: 60  SLFVVQRNPQVKPEFQFIVMNRRNTDNLKENLL-DFEYELKKPYLLYRNAKQEVNGIWFY 118
           SLFVV+RN Q  P FQFIVMNRRNT+NL ENLL DFEYE++ PYLLYRNA QEVNGIWFY
Sbjct: 61  SLFVVKRNTQ--PRFQFIVMNRRNTENLVENLLGDFEYEIQVPYLLYRNAAQEVNGIWFY 118

Query: 119 NPDECEEVGNLFNRIIDEYPKAPPSTIMPSSNSEFEELEPVSIIRXXXX----XXXXXXX 174
           N  ECEEV NLF+RI++ Y K PP   + S+ SEFEELE V  +                
Sbjct: 119 NARECEEVANLFSRILNAYAKVPPKLKVSSTKSEFEELEAVPTMAVMDGPLEPSSSITSN 178

Query: 175 XXNTPEDYVFINSLNASKVTGNYASSVESFGRPYH-SATVTSTVPNGLFTPA---PSVQI 230
             + P+D  FIN  +A+   GN  S+    G+PY  SAT++S+ P    TP    P++QI
Sbjct: 179 VADVPDDPSFINFFSAAMGIGN-TSNAPITGQPYQSSATISSSGPTHAATPVVPLPTLQI 237

Query: 231 PXXXXXX----XXXXXETINIGNQVTKLVNPSTFLAXXXXXXXXXXXXXXXVPPNAAVHH 286
           P               E+IN  +Q T LV PS F+                +P    +H 
Sbjct: 238 PSLPTSTPFTPQHDAPESINSSSQATNLVKPSFFVPPLSSAAMMMPPVSSSIPTAPPLHP 297

Query: 287 PLILPNQYGTPVFQHFXXXXXXXXXXXXXXXXXXRPVISRDKVRDALLSLVQDDQFIDMV 346
              +   YGTP+ Q                     P ISR+KVRDALL LVQD+QFIDMV
Sbjct: 298 TGTVQRPYGTPMLQP-FPPPTPPPSLAPVSSPLPNPAISREKVRDALLVLVQDNQFIDMV 356

Query: 347 FQKLLKVNLS 356
           ++ LL  + S
Sbjct: 357 YKALLNAHQS 366