Miyakogusa Predicted Gene
- Lj1g3v4719640.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj1g3v4719640.1 tr|B9HBX4|B9HBX4_POPTR Predicted protein
OS=Populus trichocarpa GN=POPTRDRAFT_561472 PE=4 SV=1,69.57,0,WD
REPEAT CONTAINING PROTEIN,NULL; no description,WD40/YVTN
repeat-like-containing domain; WD40 repe,CUFF.33026.1
(352 letters)
Database: Medicago_aa4.0v1
62,319 sequences; 21,947,249 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Medtr7g084810.1 | transducin/WD-like repeat-protein | HC | chr7:... 353 1e-97
Medtr3g092840.1 | transparent testa glabra protein | HC | chr3:4... 340 9e-94
Medtr3g092830.1 | transparent testa glabra protein | HC | chr3:4... 77 2e-14
Medtr2g016160.2 | peroxisomal targeting signal type 2 receptor |... 69 8e-12
Medtr2g016160.1 | peroxisomal targeting signal type 2 receptor |... 69 8e-12
Medtr4g045577.1 | protein transporter Sec31 | HC | chr4:15341247... 60 4e-09
Medtr5g016370.1 | transducin family protein/WD-40 repeat protein... 52 8e-07
Medtr4g095058.1 | F-box-like/WD repeat TBL1XR1-like protein | HC... 52 1e-06
Medtr4g095058.2 | F-box-like/WD repeat TBL1XR1-like protein | HC... 51 1e-06
Medtr5g024090.1 | glutamate-rich WD repeat protein | HC | chr5:9... 50 2e-06
Medtr2g085210.4 | ubiquitin ligase cop1, putative | HC | chr2:33... 50 2e-06
Medtr2g085210.1 | ubiquitin ligase cop1, putative | HC | chr2:33... 50 2e-06
Medtr2g085210.2 | ubiquitin ligase cop1, putative | HC | chr2:33... 50 2e-06
Medtr4g073080.1 | nucleosome/chromatin assembly factor group pro... 50 4e-06
Medtr8g080700.1 | glutamate-rich WD repeat protein | HC | chr8:3... 49 6e-06
>Medtr7g084810.1 | transducin/WD-like repeat-protein | HC |
chr7:32739181-32737587 | 20130731
Length = 352
Score = 353 bits (906), Expect = 1e-97, Method: Compositional matrix adjust.
Identities = 175/348 (50%), Positives = 238/348 (68%), Gaps = 16/348 (4%)
Query: 14 SQTEKSQEGIHTYAAQWPIFSIAWSLRRDKTPRLAIGSYLEDYANKVELIHFNHDDTTSN 73
S ++ + I+TY A W I+++ WS+RRDK RLAI S LE Y N+VE++ DDTT
Sbjct: 12 SDEQQKRSEIYTYEAPWHIYAMNWSVRRDKKYRLAIASLLEQYPNRVEIVQL--DDTTGE 69
Query: 74 FTTDPRLILDHPYAPTNTMFFPSEDTTNPDLIATSGDIIRLWEIQED--------KIQLK 125
+DP L +HPY PT ++F P +D PDL+ATS D +R+W I + ++LK
Sbjct: 70 IKSDPNLSFEHPYPPTKSIFIPDKDCQRPDLLATSSDFLRIWRISDSDESASDSRAVELK 129
Query: 126 SSLIGNKVSDHSA-ITSFDWAEFDTNLIASSSVDTTCTIWDIEREVMNAQLVAHDKEVYD 184
+ L GNK S++ ITSFDW E + I +SS+DTTCTIWDIE+E ++ QL+AHDKEVYD
Sbjct: 130 TLLNGNKNSEYCGPITSFDWNEAEPRRIGTSSIDTTCTIWDIEKETVDTQLIAHDKEVYD 189
Query: 185 ISWGGFNVFASVSGDGSVRVFDLRDKEKSTIIYENPVQDCPLLRLEWNKSDARFMATVGI 244
I+WGG VFASVS DGSVRVFDLRDKE STIIYE+ D PL+RL WNK D R+MAT+ +
Sbjct: 190 IAWGGVGVFASVSADGSVRVFDLRDKEHSTIIYESSEPDTPLVRLGWNKQDPRYMATIIM 249
Query: 245 NSNKVVILDIRLPTTPLMELSKHRTCVNAVSWSPGYGRNLCSVSDDATALIWEVVDPPGY 304
+S KVV+LDIR PT P++EL +H+ VNA++W+P ++C+ DD+ ALIW++
Sbjct: 250 DSAKVVVLDIRFPTLPVVELQRHQASVNAIAWAPHSSCHICTAGDDSQALIWDL---SSM 306
Query: 305 GSTVIGGEVVEPAMWYGSPAEINHVRWSPVGMDWIALAFLNNLQLLKV 352
G V GG ++P + Y + AEI ++WS DW+A+AF LQ+L+V
Sbjct: 307 GQPVEGG--LDPILAYTAGAEIEQLQWSSSQPDWVAIAFSTKLQILRV 352
>Medtr3g092840.1 | transparent testa glabra protein | HC |
chr3:42443433-42441118 | 20130731
Length = 342
Score = 340 bits (873), Expect = 9e-94, Method: Compositional matrix adjust.
Identities = 173/348 (49%), Positives = 234/348 (67%), Gaps = 15/348 (4%)
Query: 11 SMQSQTEKSQEGIHTYAAQWPIFSIAWSLRRDK-TPRLAIGSYLEDYANKVELIHFNHDD 69
S Q +S TY + +P+++++ S + R+A+GS++E+Y N++++++FN D
Sbjct: 4 STQESHLRSDNNSVTYDSPYPLYAMSISPNTNSPQQRIAVGSFIEEYTNRIDILNFNPD- 62
Query: 70 TTSNFTTDPRLILDHPYAPTNTMFFP----SEDTTNPDLIATSGDIIRLWEIQEDKIQLK 125
T + P L DHPY PT MF P S T+ DL+ATSGD +RLWE++E+ ++
Sbjct: 63 -TLSLKPQPSLSFDHPYPPTKLMFHPATHSSLQKTSSDLLATSGDYLRLWEVRENSVEAL 121
Query: 126 SSLIGNKVSDHSA-ITSFDWAEFDTNLIASSSVDTTCTIWDIEREVMNAQLVAHDKEVYD 184
S +K S+ A +TSFDW E + I +SS+DTTCTIWDIER V+ QL+AHDKEVYD
Sbjct: 122 SLFNNSKTSEFCAPLTSFDWNEIEPKRIGTSSIDTTCTIWDIERGVVETQLIAHDKEVYD 181
Query: 185 ISWGGFNVFASVSGDGSVRVFDLRDKEKSTIIYENPVQDCPLLRLEWNKSDARFMATVGI 244
I+WG VFASVS DGSVR+FDLRDKE STIIYE+P D PLLRL WNK D R+MAT+ +
Sbjct: 182 IAWGESRVFASVSADGSVRIFDLRDKEHSTIIYESPQPDTPLLRLAWNKKDLRYMATILM 241
Query: 245 NSNKVVILDIRLPTTPLMELSKHRTCVNAVSWSPGYGRNLCSVSDDATALIWEVVDPPGY 304
+SNKVVILDIR PTTP+ EL +HR VNA++W+P +++CS DDA ALIWE+
Sbjct: 242 DSNKVVILDIRSPTTPVAELERHRAGVNAIAWAPRSSKHICSGGDDAQALIWEL------ 295
Query: 305 GSTVIGGEVVEPAMWYGSPAEINHVRWSPVGMDWIALAFLNNLQLLKV 352
V G ++P Y + EIN ++WS DWIA+AF N +QLL+V
Sbjct: 296 -PAVAGPNGIDPMTTYSAGCEINQLQWSAAQPDWIAIAFANKMQLLRV 342
>Medtr3g092830.1 | transparent testa glabra protein | HC |
chr3:42439125-42438560 | 20130731
Length = 94
Score = 77.4 bits (189), Expect = 2e-14, Method: Composition-based stats.
Identities = 39/99 (39%), Positives = 57/99 (57%), Gaps = 7/99 (7%)
Query: 254 IRLPTTPLMELSKHRTCVNAVSWSPGYGRNLCSVSDDATALIWEVVDPPGYGSTVIGGEV 313
+R TTP++EL +H VN + W+P +++CS DDA ALIWE+ V G
Sbjct: 1 MRSKTTPVVELERHHADVNVIVWAPRCLKHICSGGDDAHALIWEL-------PAVAGPNG 53
Query: 314 VEPAMWYGSPAEINHVRWSPVGMDWIALAFLNNLQLLKV 352
++P + EIN ++W DWIA+AF N +QLL+V
Sbjct: 54 IDPMTMNSAGCEINQLQWCAAQPDWIAIAFANKMQLLRV 92
>Medtr2g016160.2 | peroxisomal targeting signal type 2 receptor | HC
| chr2:4893425-4894823 | 20130731
Length = 318
Score = 68.9 bits (167), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 47/161 (29%), Positives = 77/161 (47%), Gaps = 6/161 (3%)
Query: 139 ITSFDWAEFDTNLIASSSVDTTCTIWDIEREVMNAQLVAHDKEVYDISWG--GFNVFASV 196
+ S D+ + S++ D T +W ++R H VY W +VFAS
Sbjct: 110 VHSVDYNPVRRDSFLSAAWDDTVKLWTVDRPTSVRTFKEHAYCVYSSVWNPRHADVFASA 169
Query: 197 SGDGSVRVFDLRDKEKSTIIYENPVQDCPLLRLEWNKSDARFMATVGINSNKVVILDIRL 256
SGD +VR++D+R+ + I+ P + +L +WNK D +AT ++ + V + D+R
Sbjct: 170 SGDCTVRIWDVREPGSTMIL---PAHEHEILSCDWNKYDECIIATGSVDKS-VKVWDVRS 225
Query: 257 PTTPLMELSKHRTCVNAVSWSPGYGRNLCSVSDDATALIWE 297
P+ L+ H V V +SP L S S D T +W+
Sbjct: 226 YRVPVAVLNGHGYAVRKVKFSPHVRNLLVSCSYDMTVCVWD 266
>Medtr2g016160.1 | peroxisomal targeting signal type 2 receptor | HC
| chr2:4893425-4894823 | 20130731
Length = 318
Score = 68.9 bits (167), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 47/161 (29%), Positives = 77/161 (47%), Gaps = 6/161 (3%)
Query: 139 ITSFDWAEFDTNLIASSSVDTTCTIWDIEREVMNAQLVAHDKEVYDISWG--GFNVFASV 196
+ S D+ + S++ D T +W ++R H VY W +VFAS
Sbjct: 110 VHSVDYNPVRRDSFLSAAWDDTVKLWTVDRPTSVRTFKEHAYCVYSSVWNPRHADVFASA 169
Query: 197 SGDGSVRVFDLRDKEKSTIIYENPVQDCPLLRLEWNKSDARFMATVGINSNKVVILDIRL 256
SGD +VR++D+R+ + I+ P + +L +WNK D +AT ++ + V + D+R
Sbjct: 170 SGDCTVRIWDVREPGSTMIL---PAHEHEILSCDWNKYDECIIATGSVDKS-VKVWDVRS 225
Query: 257 PTTPLMELSKHRTCVNAVSWSPGYGRNLCSVSDDATALIWE 297
P+ L+ H V V +SP L S S D T +W+
Sbjct: 226 YRVPVAVLNGHGYAVRKVKFSPHVRNLLVSCSYDMTVCVWD 266
>Medtr4g045577.1 | protein transporter Sec31 | HC |
chr4:15341247-15326633 | 20130731
Length = 1124
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 50/186 (26%), Positives = 84/186 (45%), Gaps = 13/186 (6%)
Query: 125 KSSLIGNKVSDHSAITSFDWAEFDTNLIASSSVDTTCTIWDIEREV-------MNAQLVA 177
+SSL+G+ V + ++ NL+AS + D IWD+ + + A
Sbjct: 111 ESSLVGHLVRHKGPVRGLEFNSIAPNLLASGAEDGEICIWDLANPLEPTHFPPLKGSGSA 170
Query: 178 HDKEVYDISWGGF--NVFASVSGDGSVRVFDLRDKEKSTIIYENPVQDCPLLRLEWNKSD 235
EV +SW ++ AS S +G+ V+DL+ K+KS I +PV+ L+W+
Sbjct: 171 SQGEVSFLSWNSKVQHILASTSYNGTTVVWDLK-KQKSVISVVDPVRRRGSA-LQWHPDV 228
Query: 236 ARFMATVGI--NSNKVVILDIRLPTTPLMELSKHRTCVNAVSWSPGYGRNLCSVSDDATA 293
A +A S + + D+R TP+ E H V A+SW P L + D+
Sbjct: 229 ATQLAVASDEDGSPSIKLWDMRNTMTPVKEFVGHSRGVIAMSWCPNDSSYLLTCGKDSRT 288
Query: 294 LIWEVV 299
+ W+ +
Sbjct: 289 ICWDTI 294
>Medtr5g016370.1 | transducin family protein/WD-40 repeat protein |
HC | chr5:5874227-5866099 | 20130731
Length = 595
Score = 52.0 bits (123), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 62/247 (25%), Positives = 99/247 (40%), Gaps = 39/247 (15%)
Query: 104 LIATSGD-IIRLWEIQEDKIQLKSS-----------LIGNKVSDHSAITSFDWAEFDTNL 151
L + SGD R+W I E +L S + G + +T+ DW T L
Sbjct: 262 LASGSGDSTARIWTIAEGTRKLDSKNDPSSVLVLQHIRGTTTEKNKDVTTLDWNGEGT-L 320
Query: 152 IASSSVDTTCTIWDIEREVMNAQLVAHDKEVYDISWGGFNVFASVSG-DGSVRVFDLR-D 209
+A+ S D IW E + + L H ++ + W + G DGS V+D++ +
Sbjct: 321 LATGSYDGQARIWTTNGE-LKSTLCKHKGPIFSLKWNKKGDYILTGGFDGSAIVWDVQAE 379
Query: 210 KEKSTIIYENPVQDCPLLRLEWNKSDARFMATVGINSNKVVILDIRLPTT-PLMELSKHR 268
K K + L ++W +++ F ++ SN +I ++ P+ + H+
Sbjct: 380 KWKQQFDFHRG----STLDVDW-RNNVSFASS----SNDTMIHVCKIGENHPVKTFAGHQ 430
Query: 269 TCVNAVSWSPGYGRNLCSVSDDATALIWEVVDPPGYGSTVIGGEVVEPAMWYGSPAEINH 328
VN + W P G L S SDD TA IW + + EI
Sbjct: 431 GEVNCIKWDP-TGSILASCSDDNTAKIWSMKQDKYIHD------------FREHSKEIYA 477
Query: 329 VRWSPVG 335
+RWSP G
Sbjct: 478 IRWSPTG 484
>Medtr4g095058.1 | F-box-like/WD repeat TBL1XR1-like protein | HC |
chr4:39607610-39623874 | 20130731
Length = 578
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 63/245 (25%), Positives = 95/245 (38%), Gaps = 35/245 (14%)
Query: 104 LIATSGD-IIRLWEIQEDKIQLKSSLI-----------GNKVSDHSAITSFDWAEFDTNL 151
L + SGD R+W I E + + S + GN +TS DW T L
Sbjct: 245 LASGSGDSTARIWAIPEGRCKSGSQSVPLDALVLRHVRGNTNEKSKDVTSIDWNGEGT-L 303
Query: 152 IASSSVDTTCTIWDIEREVMNAQLVAHDKEVYDISWGG-FNVFASVSGDGSVRVFDLRDK 210
+A+ S D IW E + L H ++ + W + + S D + V+D++ +
Sbjct: 304 LATGSYDGQARIWTTNGE-LKTTLSKHKGPIFSLKWNKRCDYILTGSCDQTAIVWDVKAE 362
Query: 211 EKSTIIYENPVQDCPLLRLEWNKSDARFMATVGINSNKVVILDIRLPTTPLMELSKHRTC 270
E + P L ++W +++ F ++ N V + PT + H+
Sbjct: 363 E---CKQQFGFHSGPTLDVDW-RTNTSFASSSTDNMIYVCKIGENHPT---QTFAGHQGE 415
Query: 271 VNAVSWSPGYGRNLCSVSDDATALIWEVVDPPGYGSTVIGGEVVEPAMWYGSPAEINHVR 330
VN V W P G L S SDD TA IW V + EI +R
Sbjct: 416 VNCVKWDP-TGTLLASCSDDITAKIWSVKQDKYLHD------------FREHSKEIYTIR 462
Query: 331 WSPVG 335
WSP G
Sbjct: 463 WSPTG 467
>Medtr4g095058.2 | F-box-like/WD repeat TBL1XR1-like protein | HC |
chr4:39607610-39623829 | 20130731
Length = 576
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 63/245 (25%), Positives = 95/245 (38%), Gaps = 35/245 (14%)
Query: 104 LIATSGD-IIRLWEIQEDKIQLKSSLI-----------GNKVSDHSAITSFDWAEFDTNL 151
L + SGD R+W I E + + S + GN +TS DW T L
Sbjct: 243 LASGSGDSTARIWAIPEGRCKSGSQSVPLDALVLRHVRGNTNEKSKDVTSIDWNGEGT-L 301
Query: 152 IASSSVDTTCTIWDIEREVMNAQLVAHDKEVYDISWGG-FNVFASVSGDGSVRVFDLRDK 210
+A+ S D IW E + L H ++ + W + + S D + V+D++ +
Sbjct: 302 LATGSYDGQARIWTTNGE-LKTTLSKHKGPIFSLKWNKRCDYILTGSCDQTAIVWDVKAE 360
Query: 211 EKSTIIYENPVQDCPLLRLEWNKSDARFMATVGINSNKVVILDIRLPTTPLMELSKHRTC 270
E + P L ++W +++ F ++ N V + PT + H+
Sbjct: 361 E---CKQQFGFHSGPTLDVDW-RTNTSFASSSTDNMIYVCKIGENHPT---QTFAGHQGE 413
Query: 271 VNAVSWSPGYGRNLCSVSDDATALIWEVVDPPGYGSTVIGGEVVEPAMWYGSPAEINHVR 330
VN V W P G L S SDD TA IW V + EI +R
Sbjct: 414 VNCVKWDP-TGTLLASCSDDITAKIWSVKQDKYLHD------------FREHSKEIYTIR 460
Query: 331 WSPVG 335
WSP G
Sbjct: 461 WSPTG 465
>Medtr5g024090.1 | glutamate-rich WD repeat protein | HC |
chr5:9647473-9652782 | 20130731
Length = 455
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 37/115 (32%), Positives = 57/115 (49%), Gaps = 9/115 (7%)
Query: 150 NLIASSSVDTTCTIWDIE-REVMNAQLVAHDKEVYDISW---GGF--NVFASVSGDGSVR 203
++ AS SVD + IWD R +AH+ +V ISW G+ N+ AS S DGS+
Sbjct: 275 DVFASCSVDKSIAIWDTRCRRSPRLTFIAHNADVNVISWNRSAGYTSNLLASGSDDGSIS 334
Query: 204 VFDLRDKE--KSTIIYENPVQDCPLLRLEWNKSDARFMATVGINSNKVVILDIRL 256
V DLR + K ++ P+ +EWN + A V + N++ I D+ +
Sbjct: 335 VHDLRSLQEGKDPVVAHFEYHKHPITSIEWNPDNTSSFA-VSSSDNQLTIWDLSV 388
>Medtr2g085210.4 | ubiquitin ligase cop1, putative | HC |
chr2:33258450-33252948 | 20130731
Length = 875
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 45/176 (25%), Positives = 79/176 (44%), Gaps = 16/176 (9%)
Query: 136 HSAITSFDWAEFDTNLIASSSVDTTCTIWDIEREVMNAQLVAHDKEVYDISWGGFN--VF 193
S ++S W + + IASS+ + +WD+ R + +++ H++ V+ I + + +
Sbjct: 614 RSKLSSLCWNTYIKSQIASSNFEGVVQLWDVTRSQILSEMREHERRVWSIDFSSADPTML 673
Query: 194 ASVSGDGSVRVFDLRDKEKSTIIYENPVQDCPLLRLEWNKSDARFMATVGINSNKVVILD 253
AS S DGSV+++ + I C L+ AR++A G +++ D
Sbjct: 674 ASGSDDGSVKLWSINQGVSIGTIKTKANVCCVQFPLD----SARYLA-FGSADHRIYYYD 728
Query: 254 IRLPTTPLMELSKHRTCVNAVSWSPGYGRNLCSVSDDATALIWE-------VVDPP 302
+R PL L H V+ + + NL S S D T +W+ VVD P
Sbjct: 729 LRNLRVPLCTLVGHNKTVSYIKFVDNV--NLVSASTDNTLKLWDLSTCTSRVVDSP 782
>Medtr2g085210.1 | ubiquitin ligase cop1, putative | HC |
chr2:33258325-33253004 | 20130731
Length = 875
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 45/176 (25%), Positives = 79/176 (44%), Gaps = 16/176 (9%)
Query: 136 HSAITSFDWAEFDTNLIASSSVDTTCTIWDIEREVMNAQLVAHDKEVYDISWGGFN--VF 193
S ++S W + + IASS+ + +WD+ R + +++ H++ V+ I + + +
Sbjct: 614 RSKLSSLCWNTYIKSQIASSNFEGVVQLWDVTRSQILSEMREHERRVWSIDFSSADPTML 673
Query: 194 ASVSGDGSVRVFDLRDKEKSTIIYENPVQDCPLLRLEWNKSDARFMATVGINSNKVVILD 253
AS S DGSV+++ + I C L+ AR++A G +++ D
Sbjct: 674 ASGSDDGSVKLWSINQGVSIGTIKTKANVCCVQFPLD----SARYLA-FGSADHRIYYYD 728
Query: 254 IRLPTTPLMELSKHRTCVNAVSWSPGYGRNLCSVSDDATALIWE-------VVDPP 302
+R PL L H V+ + + NL S S D T +W+ VVD P
Sbjct: 729 LRNLRVPLCTLVGHNKTVSYIKFVDNV--NLVSASTDNTLKLWDLSTCTSRVVDSP 782
>Medtr2g085210.2 | ubiquitin ligase cop1, putative | HC |
chr2:33258303-33252948 | 20130731
Length = 875
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 45/176 (25%), Positives = 79/176 (44%), Gaps = 16/176 (9%)
Query: 136 HSAITSFDWAEFDTNLIASSSVDTTCTIWDIEREVMNAQLVAHDKEVYDISWGGFN--VF 193
S ++S W + + IASS+ + +WD+ R + +++ H++ V+ I + + +
Sbjct: 614 RSKLSSLCWNTYIKSQIASSNFEGVVQLWDVTRSQILSEMREHERRVWSIDFSSADPTML 673
Query: 194 ASVSGDGSVRVFDLRDKEKSTIIYENPVQDCPLLRLEWNKSDARFMATVGINSNKVVILD 253
AS S DGSV+++ + I C L+ AR++A G +++ D
Sbjct: 674 ASGSDDGSVKLWSINQGVSIGTIKTKANVCCVQFPLD----SARYLA-FGSADHRIYYYD 728
Query: 254 IRLPTTPLMELSKHRTCVNAVSWSPGYGRNLCSVSDDATALIWE-------VVDPP 302
+R PL L H V+ + + NL S S D T +W+ VVD P
Sbjct: 729 LRNLRVPLCTLVGHNKTVSYIKFVDNV--NLVSASTDNTLKLWDLSTCTSRVVDSP 782
>Medtr4g073080.1 | nucleosome/chromatin assembly factor group
protein | HC | chr4:27640107-27642823 | 20130731
Length = 405
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 52/191 (27%), Positives = 80/191 (41%), Gaps = 26/191 (13%)
Query: 144 WAEFDTNLIASSSVDTTCTIWDI----EREVMNAQLV--AHDKEVYDISWG--GFNVFAS 195
W+ F + S S D +WD+ E V++A V H+ V D+SW N+F S
Sbjct: 170 WSGFKNGYLLSGSNDHKICLWDVFGASESNVLDAVHVYEGHESVVEDVSWHFHNENLFGS 229
Query: 196 VSGDGSVRVFDLR--DKEKSTIIYENPVQDCPLLRL-EWNKSDARFMATVGINSNKVVIL 252
D + ++DLR + S +E V EW +AT +++ + +
Sbjct: 230 GGDDCKLIIWDLRTNKAQHSLKPHEREVNFVSFSPYSEW------ILATASSDTD-IGLF 282
Query: 253 DIRLPTTPLMELSKHRTCVNAVSWSPGYGRNLCSVSDDATALIWEVVDPPGYGSTVIGGE 312
D+R PL LS H V V W P + L S S D ++W++ IG E
Sbjct: 283 DLRKLEVPLHFLSSHTDEVFQVEWDPNHEGVLASSSADRRLMVWDL--------NRIGDE 334
Query: 313 VVEPAMWYGSP 323
++E G P
Sbjct: 335 LIEGDEEGGPP 345
>Medtr8g080700.1 | glutamate-rich WD repeat protein | HC |
chr8:34739832-34734055 | 20130731
Length = 469
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 35/123 (28%), Positives = 59/123 (47%), Gaps = 5/123 (4%)
Query: 138 AITSFDWAEFDTNLIASSSVDTTCTIWDIE-REVMNAQLVAHDKEVYDISWGGFN--VFA 194
++ W+ + ++ AS SVD + IWD A AH +V +SW + A
Sbjct: 272 SVEDLQWSPTEPHVFASCSVDKSIAIWDTRLGRSPAASFQAHKADVNVLSWNRLASCMLA 331
Query: 195 SVSGDGSVRVFDLR-DKEKSTIIYENPVQDCPLLRLEWNKSDARFMATVGINSNKVVILD 253
S S DG++ + DLR KE +++ P+ +EW+ +A +A V N++ I D
Sbjct: 332 SGSDDGTISIRDLRLLKEGDSVVAHFEYHKHPITSIEWSPHEASSLA-VSSADNQLTIWD 390
Query: 254 IRL 256
+ L
Sbjct: 391 LSL 393