Miyakogusa Predicted Gene

Lj1g3v4717450.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v4717450.1 gi|3695058|gb|AF064787.1|.path1.1
         (493 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr7g104900.1 | PAK-box/P21-Rho-binding domain Rho GTPase acti...   650   0.0  
Medtr2g086580.1 | PAK-box/P21-Rho-binding domain Rho GTPase acti...   393   e-109
Medtr4g052850.1 | PAK-box/P21-Rho-binding domain Rho GTPase acti...   380   e-105
Medtr8g026680.1 | Rac GTPase activating protein | HC | chr8:9249...   372   e-103
Medtr1g089500.1 | Rac GTPase activating protein | HC | chr1:3999...   353   3e-97
Medtr7g107560.1 | Rac GTPase activating protein | HC | chr7:4387...   337   1e-92
Medtr7g081615.1 | PAK-box/P21-Rho-binding domain Rho GTPase acti...   219   4e-57
Medtr5g064420.1 | PAK-box/P21-Rho-binding domain Rho GTPase acti...   218   1e-56

>Medtr7g104900.1 | PAK-box/P21-Rho-binding domain Rho GTPase
           activating protein | HC | chr7:42531591-42525668 |
           20130731
          Length = 477

 Score =  650 bits (1678), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 329/432 (76%), Positives = 354/432 (81%), Gaps = 23/432 (5%)

Query: 62  LSLLTLLIATFRKSLIGSCSTSPRDSGALSSSSMEIGWPSNVRHVAHVTFDRFHGFLGLX 121
           LS+LTLLIATFRKSLIG  +T     G+  SSSMEIGWPSNVRHVAHVTFDRFHGFLGL 
Sbjct: 69  LSILTLLIATFRKSLIGCTNT-----GSELSSSMEIGWPSNVRHVAHVTFDRFHGFLGLP 123

Query: 122 XXXXXXXXXXXXSASTSVFGVSTESMQLSFDARGNSVPTILLLMQRHLYARGGLQAEGIF 181
                       SASTSVFGVSTESMQLSFDARGNSVPTILLLMQRHLYA+GGLQAEGIF
Sbjct: 124 VEFEPEVPTRPPSASTSVFGVSTESMQLSFDARGNSVPTILLLMQRHLYAQGGLQAEGIF 183

Query: 182 RINAENSQEELVREQLNRGVVPNGVDVHCLAGLIKAWFRELPTGILDPLSPEEVMQSQSE 241
           RINAENSQEE VREQLNRGVVPNG+DVHCLAGLIKAWFRELPTGILDPLSPE+VMQSQ+E
Sbjct: 184 RINAENSQEEFVREQLNRGVVPNGIDVHCLAGLIKAWFRELPTGILDPLSPEQVMQSQTE 243

Query: 242 EECDQLVRLLPPTEAALLDWAINLMADVAQMEHFNKMNARNIAMVFAPNMTHMADPLTAL 301
           EEC QLVRLLP TE+ALLDWA+NLMADVAQMEH NKMNARNIAMVFAPNMTHM DPLTAL
Sbjct: 244 EECAQLVRLLPATESALLDWAVNLMADVAQMEHLNKMNARNIAMVFAPNMTHMVDPLTAL 303

Query: 302 MYAVQVMSFLKTLVVKTLREREESIVKSNPVPNLNSFDDDGHQSDSQVLPKDGSENGNDC 361
           MYAVQVM+FLKTLV  TL+EREESI KSNP  NLNSFDDDGHQSDS +L KD SE GND 
Sbjct: 304 MYAVQVMNFLKTLVAMTLKEREESITKSNPSSNLNSFDDDGHQSDSPLLFKDESEYGNDY 363

Query: 362 SDEDTVFVSAEPSQPSPTHHTEDGCETESGSETSPTPAENFLSSGSRLLIDSCPCNVVSQ 421
           SDEDTVFV+AEPSQ SPTH  +D CETESGS++  T  ENF+ SG+RLL+DSCPC VVSQ
Sbjct: 364 SDEDTVFVTAEPSQQSPTHLFKDDCETESGSKSLQTSTENFIPSGNRLLVDSCPCGVVSQ 423

Query: 422 LCSFAIGLQDSSIATGQAKISRSKSLQMSTSDIDKSFKNVIEFPVVGPAEKNRGTAIIGR 481
           +CS AIG Q  +           KSLQ++TSD DK           G  EKNRG A+IGR
Sbjct: 424 ICSMAIGDQTKNC----------KSLQLNTSDTDKC--------SAGSVEKNRGIALIGR 465

Query: 482 INSRTELTEAWR 493
           INSR+EL EAWR
Sbjct: 466 INSRSELAEAWR 477


>Medtr2g086580.1 | PAK-box/P21-Rho-binding domain Rho GTPase
           activating protein | HC | chr2:36405412-36408662 |
           20130731
          Length = 451

 Score =  393 bits (1009), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 227/437 (51%), Positives = 279/437 (63%), Gaps = 33/437 (7%)

Query: 61  QLSLLTLLIATFRKSLIGSCSTSPRDSGALSSSSMEIGWPSNVRHVAHVTFDRFHGFLGL 120
              L  LL+  FRKSL        + SG     +M+I  P+NVRHVAHVTFDRF+GFLGL
Sbjct: 44  HFPLFELLVTLFRKSLFPF-----KSSGNKDLCNMDISPPTNVRHVAHVTFDRFNGFLGL 98

Query: 121 XXXXXXXXXXXXXSASTSVFGVSTESMQLSFDARGNSVPTILLLMQRHLYARGGLQAEGI 180
                        SAS +VFGVSTESMQLS+D+RGNSVPTILLLMQRHLY + GLQ EGI
Sbjct: 99  PDEFEPDFPRRPPSASATVFGVSTESMQLSYDSRGNSVPTILLLMQRHLYVQEGLQVEGI 158

Query: 181 FRINAENSQEELVREQLNRGVVPNGVDVHCLAGLIKAWFRELPTGILDPLSPEEVMQSQS 240
           FRINA+NSQEE VR QLN G+VP  +DVHCLAGLIKAWFRELP+G+LD LS E+VMQ Q+
Sbjct: 159 FRINADNSQEEHVRNQLNMGLVPEDIDVHCLAGLIKAWFRELPSGVLDSLSQEQVMQCQT 218

Query: 241 EEECDQLVRLLPPTEAALLDWAINLMADVAQMEHFNKMNARNIAMVFAPNMTHMADPLTA 300
           EE+C +LVR LP  EAALLDWAINLMADV + E+ NKMNARNIAMVFAPNMT MADP TA
Sbjct: 219 EEDCIELVRHLPHAEAALLDWAINLMADVVEHENLNKMNARNIAMVFAPNMTQMADPFTA 278

Query: 301 LMYAVQVMSFLKTLVVKTLREREESIVKSNPVPNLNSFDDDGHQSDSQVLPKDGSENGND 360
           LMYAVQVM+FLKTL+++TLRER++S+V+SNP  NL   D++GH+   +   K+ +    D
Sbjct: 279 LMYAVQVMNFLKTLILRTLRERKDSVVESNPRLNLEPSDENGHRRLFESFQKEDTA-AAD 337

Query: 361 CSDEDTVFVSAEPSQPSPTHHTEDGCETESGSETSPTPAENFLSSGSRLLIDSCPCNVVS 420
             +   +FVS +         T   C  ES  + S T  E    SGS +     P     
Sbjct: 338 NKEAKEIFVSEK---------TVVECTPESLEKNSSTERE----SGSLIRTSENPICNEE 384

Query: 421 QLCSFAIGLQDSSIATGQAKISRSKSLQMSTSDIDK-SFKNVIEFPVV---GPAEKNRGT 476
             C F            +     +KS Q S+S+  K S K   + PV+   G  EK +G 
Sbjct: 385 LYCEF---------PPKKNMGKNNKSGQSSSSNARKGSKKTRGQQPVINGKGSVEK-KGM 434

Query: 477 AIIGRINSRTELTEAWR 493
             +   ++R++  EAWR
Sbjct: 435 RTLSSTDTRSDRVEAWR 451


>Medtr4g052850.1 | PAK-box/P21-Rho-binding domain Rho GTPase
           activating protein | HC | chr4:19175348-19178049 |
           20130731
          Length = 363

 Score =  380 bits (976), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 189/304 (62%), Positives = 229/304 (75%), Gaps = 9/304 (2%)

Query: 61  QLSLLTLLIATFRKSLIGSCSTSPRDSGALSSSSMEIGWPSNVRHVAHVTFDRFHGFLGL 120
           +LS L +L+  FRKSL+ SC++         +S+MEIG P+NVRH+AHVTFDRF+GFLGL
Sbjct: 67  ELSFLAILVTLFRKSLV-SCASD--------ASAMEIGHPTNVRHLAHVTFDRFNGFLGL 117

Query: 121 XXXXXXXXXXXXXSASTSVFGVSTESMQLSFDARGNSVPTILLLMQRHLYARGGLQAEGI 180
                        SAS +VFGVSTESM+LS+D RGN VPTILLL+Q HLYA+GGLQAEGI
Sbjct: 118 PLELVPQVPTTPPSASATVFGVSTESMKLSYDRRGNIVPTILLLIQEHLYAQGGLQAEGI 177

Query: 181 FRINAENSQEELVREQLNRGVVPNGVDVHCLAGLIKAWFRELPTGILDPLSPEEVMQSQS 240
           FRINA+N QEE +R+QLN+GVVP  +DVHCLAGLIKAWFRELP G+LD LSPE+VM  Q+
Sbjct: 178 FRINADNRQEEYLRDQLNKGVVPEDIDVHCLAGLIKAWFRELPRGVLDSLSPEQVMTCQT 237

Query: 241 EEECDQLVRLLPPTEAALLDWAINLMADVAQMEHFNKMNARNIAMVFAPNMTHMADPLTA 300
           EE+C +L+  LP TEA+LL+W INLMADV Q EH NKMNARNIAMVFAPNMT MADPLTA
Sbjct: 238 EEDCAELMSQLPHTEASLLNWTINLMADVVQEEHLNKMNARNIAMVFAPNMTRMADPLTA 297

Query: 301 LMYAVQVMSFLKTLVVKTLREREESIVKSNPVPNLNSFDDDGHQSDSQVLPKDGSENGND 360
            MYAVQVM+FLKTLV  TL+ER +S V+S+P   +  FD++   S      +D +     
Sbjct: 298 FMYAVQVMNFLKTLVSMTLKERNDSDVESSPEFYIEPFDENEEHSHCNSFQQDVATENEM 357

Query: 361 CSDE 364
            S+E
Sbjct: 358 LSNE 361


>Medtr8g026680.1 | Rac GTPase activating protein | HC |
           chr8:9249397-9245785 | 20130731
          Length = 492

 Score =  372 bits (956), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 176/267 (65%), Positives = 215/267 (80%), Gaps = 6/267 (2%)

Query: 60  DQLSLLTLLIATFRKSLIGSCSTSPRDSGALSSSSMEIGWPSNVRHVAHVTFDRFHGFLG 119
           +Q ++L +++A  +KS++ +CS    D      SS++I WP+ VRHV+HVTFDRF+GFLG
Sbjct: 80  NQFAILDIVMAALKKSIV-TCSVEREDV-----SSLDISWPTEVRHVSHVTFDRFNGFLG 133

Query: 120 LXXXXXXXXXXXXXSASTSVFGVSTESMQLSFDARGNSVPTILLLMQRHLYARGGLQAEG 179
           L             SAS  VFGVS +SMQ S+D RGNSVPTILL MQ+ LY+ GGL+AEG
Sbjct: 134 LPSEFQPEVPTRVPSASVKVFGVSAKSMQCSYDDRGNSVPTILLRMQKQLYSEGGLKAEG 193

Query: 180 IFRINAENSQEELVREQLNRGVVPNGVDVHCLAGLIKAWFRELPTGILDPLSPEEVMQSQ 239
           IFRI AENSQE  VR+QLN+GVVP+G+DVHCL+GLIKAWFRELPTG+LD L+PE+VMQ  
Sbjct: 194 IFRITAENSQEAFVRDQLNKGVVPHGIDVHCLSGLIKAWFRELPTGVLDSLTPEQVMQCN 253

Query: 240 SEEECDQLVRLLPPTEAALLDWAINLMADVAQMEHFNKMNARNIAMVFAPNMTHMADPLT 299
           +E++C  LV+LLP TEAALLDWAINLMADV + E FNKMNARN+AMVFAPNMT MADPLT
Sbjct: 254 TEDDCTNLVKLLPSTEAALLDWAINLMADVVENEQFNKMNARNVAMVFAPNMTQMADPLT 313

Query: 300 ALMYAVQVMSFLKTLVVKTLREREESI 326
           AL++AVQVM+FLKTL++K LREREESI
Sbjct: 314 ALIHAVQVMNFLKTLILKMLREREESI 340


>Medtr1g089500.1 | Rac GTPase activating protein | HC |
           chr1:39993064-39989777 | 20130731
          Length = 483

 Score =  353 bits (905), Expect = 3e-97,   Method: Compositional matrix adjust.
 Identities = 174/279 (62%), Positives = 213/279 (76%), Gaps = 3/279 (1%)

Query: 72  FRKSLIGSCSTSPRDSGALSS-SSMEIGWPSNVRHVAHVTFDRFHGFLGLXXXXXXXXXX 130
            RKS++  C     D   +S+   MEIGWP++V+H+ HVTFDRF+GFLGL          
Sbjct: 44  IRKSMVA-CRVDRPDHEVISTVHQMEIGWPTDVQHITHVTFDRFNGFLGLPVEFEVEIPG 102

Query: 131 XXXSASTSVFGVSTESMQLSFDARGNSVPTILLLMQRHLYARGGLQAEGIFRINAENSQE 190
              SAS SVFGVS ESMQ S+D++GNSVPTIL+LMQ  LY++GGL+AEGIFRIN ENS+E
Sbjct: 103 RVPSASVSVFGVSAESMQCSYDSKGNSVPTILMLMQDRLYSQGGLKAEGIFRINPENSKE 162

Query: 191 ELVREQLNRGVVPNGVDVHCLAGLIKAWFRELPTGILDPLSPEEVMQSQSEEECDQLVRL 250
           E VR QLN G+VP+ +DVHCLAGLIKAWFRELP+G+LD LSPE+V++  +EEE  +LV+ 
Sbjct: 163 EHVRNQLNSGIVPDDIDVHCLAGLIKAWFRELPSGVLDGLSPEQVLECNTEEESIELVKQ 222

Query: 251 LPPTEAALLDWAINLMADVAQMEHFNKMNARNIAMVFAPNMTHMADPLTALMYAVQVMSF 310
           L PTE+ALL WAI+LMADV Q E FNKMNARNIAMVFAPNMT M+DPLTALM+AVQVM+ 
Sbjct: 223 LKPTESALLSWAIDLMADVVQEEEFNKMNARNIAMVFAPNMTQMSDPLTALMHAVQVMNL 282

Query: 311 LKTLVVKTLREREESIVKS-NPVPNLNSFDDDGHQSDSQ 348
           LKTL++KTLREREE+     +P+    SF     + DSQ
Sbjct: 283 LKTLIMKTLREREETATGGYSPMSFRTSFRRSEDEYDSQ 321


>Medtr7g107560.1 | Rac GTPase activating protein | HC |
           chr7:43875012-43878185 | 20130731
          Length = 435

 Score =  337 bits (865), Expect = 1e-92,   Method: Compositional matrix adjust.
 Identities = 168/266 (63%), Positives = 209/266 (78%)

Query: 60  DQLSLLTLLIATFRKSLIGSCSTSPRDSGALSSSSMEIGWPSNVRHVAHVTFDRFHGFLG 119
           +++S   L++A  +KS++     SP D  +     MEIGWP+NV+HV HVTFDRF+GFLG
Sbjct: 25  EEVSPAALMLAALKKSMVACSVESPDDVISAVHHPMEIGWPTNVKHVNHVTFDRFNGFLG 84

Query: 120 LXXXXXXXXXXXXXSASTSVFGVSTESMQLSFDARGNSVPTILLLMQRHLYARGGLQAEG 179
           L             SAS SVFGVS ESMQ S+D++GNSVPTILLLMQ  LY++GGL+AEG
Sbjct: 85  LPLELEVHVPAPVPSASVSVFGVSAESMQCSYDSKGNSVPTILLLMQERLYSQGGLKAEG 144

Query: 180 IFRINAENSQEELVREQLNRGVVPNGVDVHCLAGLIKAWFRELPTGILDPLSPEEVMQSQ 239
           IFRIN EN +EE +REQLN G+VPN +DVHCLAGLIKAWFRELP+G+LD LSPEEV++  
Sbjct: 145 IFRINPENGEEEHLREQLNSGIVPNDIDVHCLAGLIKAWFRELPSGVLDGLSPEEVLECN 204

Query: 240 SEEECDQLVRLLPPTEAALLDWAINLMADVAQMEHFNKMNARNIAMVFAPNMTHMADPLT 299
           +EEE  +LV+ L P E+ALL+WA++LMADV   E  NKM+ARNIAMVFAPNMT M+DPLT
Sbjct: 205 TEEESVELVKQLKPVESALLNWAVDLMADVVVEEECNKMDARNIAMVFAPNMTQMSDPLT 264

Query: 300 ALMYAVQVMSFLKTLVVKTLREREES 325
           ALM+AVQVM+ LKTL++KTLR+REE+
Sbjct: 265 ALMHAVQVMNLLKTLILKTLRDREET 290


>Medtr7g081615.1 | PAK-box/P21-Rho-binding domain Rho GTPase
           activating protein | HC | chr7:31295617-31296762 |
           20130731
          Length = 182

 Score =  219 bits (558), Expect = 4e-57,   Method: Compositional matrix adjust.
 Identities = 104/160 (65%), Positives = 129/160 (80%), Gaps = 2/160 (1%)

Query: 134 SASTSVFGVSTESMQLSFDARGNSVPTILLLMQRHLYARGGLQAEGIFRINAENSQEELV 193
           + S SVFGVS ESMQ S+D++GNSVP ILLLMQ  LY++G  + +GIF IN EN +EE +
Sbjct: 14  AISVSVFGVSVESMQCSYDSKGNSVPAILLLMQERLYSQG--RTKGIFCINLENGEEEHL 71

Query: 194 REQLNRGVVPNGVDVHCLAGLIKAWFRELPTGILDPLSPEEVMQSQSEEECDQLVRLLPP 253
           REQ N G+VP  +DVHCLAGLIKAWFRELP+G+LD LSPEEV++  +EEE  +LV+LL P
Sbjct: 72  REQFNSGIVPIDIDVHCLAGLIKAWFRELPSGVLDGLSPEEVLECNTEEEFVELVKLLKP 131

Query: 254 TEAALLDWAINLMADVAQMEHFNKMNARNIAMVFAPNMTH 293
            E+ALL+WA++LMADV   E +NK+NA NIAMVFAPNMT 
Sbjct: 132 VESALLNWAVDLMADVVVEEEYNKLNAINIAMVFAPNMTQ 171


>Medtr5g064420.1 | PAK-box/P21-Rho-binding domain Rho GTPase
           activating protein | HC | chr5:27034836-27036920 |
           20130731
          Length = 238

 Score =  218 bits (555), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 105/153 (68%), Positives = 123/153 (80%), Gaps = 4/153 (2%)

Query: 138 SVFGVSTESMQLSFDARGNSVPTILLLMQRHLYARGGLQAEGIFRINAENSQEELVREQL 197
           +VFGVSTESM+LS+D RGN VPTILLLMQ HLYA+GGLQAEGIFRINA+N QEE  R++L
Sbjct: 50  TVFGVSTESMKLSYDRRGNIVPTILLLMQEHLYAQGGLQAEGIFRINADNRQEEYHRDEL 109

Query: 198 NRGVVPNGVDVHCLAGLIKAWFRELPTGILDPLSPEEVMQSQSEEECDQLVRLLPPTEAA 257
           N+GVVP  +DVHCL GLIK   +    G+LD LSPE+VMQ Q+EE+C +L   LP TEA+
Sbjct: 110 NKGVVPEDIDVHCLTGLIKGATK----GVLDSLSPEQVMQCQTEEDCAELASHLPHTEAS 165

Query: 258 LLDWAINLMADVAQMEHFNKMNARNIAMVFAPN 290
           LL+W INLMADV Q EH NKMNA NIAMVF  +
Sbjct: 166 LLNWTINLMADVVQEEHLNKMNACNIAMVFTKH 198