Miyakogusa Predicted Gene
- Lj1g3v4717390.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj1g3v4717390.1 tr|G7KQW4|G7KQW4_MEDTR RNA-binding protein
OS=Medicago truncatula GN=MTR_7g104800 PE=4
SV=1,78.99,0,coiled-coil,NULL; SUBFAMILY NOT NAMED,NULL; FAMILY NOT
NAMED,NULL; RNA recognition motif,RNA recogni,CUFF.33094.1
(496 letters)
Database: Medicago_aa4.0v1
62,319 sequences; 21,947,249 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Medtr7g104800.2 | RNA recognition motif, a.k.a. RRM, RBD protein... 520 e-147
Medtr7g104800.1 | RNA recognition motif, a.k.a. RRM, RBD protein... 520 e-147
Medtr7g104800.4 | RNA recognition motif, a.k.a. RRM, RBD protein... 520 e-147
Medtr7g104800.3 | RNA recognition motif, a.k.a. RRM, RBD protein... 520 e-147
Medtr4g052940.3 | RNA recognition motif, a.k.a. RRM, RBD protein... 436 e-122
Medtr4g052940.2 | RNA recognition motif, a.k.a. RRM, RBD protein... 436 e-122
Medtr4g052940.1 | RNA recognition motif, a.k.a. RRM, RBD protein... 436 e-122
Medtr7g010360.1 | RNA recognition motif, a.k.a. RRM, RBD protein... 399 e-111
Medtr4g052940.4 | RNA recognition motif, a.k.a. RRM, RBD protein... 397 e-111
Medtr7g118120.1 | RNA recognition motif, a.k.a. RRM, RBD protein... 358 5e-99
Medtr7g118120.3 | RNA recognition motif, a.k.a. RRM, RBD protein... 358 5e-99
Medtr7g118120.2 | RNA recognition motif, a.k.a. RRM, RBD protein... 358 5e-99
Medtr8g076100.3 | heterogeneous nuclear ribonucleoprotein | HC |... 150 2e-36
Medtr8g076100.1 | heterogeneous nuclear ribonucleoprotein | HC |... 150 2e-36
Medtr8g076100.2 | heterogeneous nuclear ribonucleoprotein | HC |... 150 2e-36
Medtr8g007390.2 | heterogeneous nuclear ribonucleoprotein | HC |... 134 3e-31
Medtr8g007390.1 | heterogeneous nuclear ribonucleoprotein | HC |... 134 3e-31
Medtr8g007390.3 | heterogeneous nuclear ribonucleoprotein | HC |... 134 3e-31
Medtr8g007390.4 | heterogeneous nuclear ribonucleoprotein | HC |... 134 3e-31
Medtr7g081210.1 | RNA recognition motif, a.k.a. RRM, RBD protein... 106 7e-23
Medtr3g102040.1 | polyadenylate-binding protein | HC | chr3:4701... 86 9e-17
Medtr4g131970.1 | polyadenylate-binding protein RBP47C | HC | ch... 86 1e-16
Medtr1g019150.1 | polyadenylate-binding protein | HC | chr1:5708... 85 1e-16
Medtr4g085540.1 | polyadenylate-binding protein | HC | chr4:3341... 83 8e-16
Medtr2g022950.1 | polyadenylate-binding protein RBP47B | HC | ch... 80 3e-15
Medtr6g040190.1 | polyadenylate-binding protein | LC | chr6:1440... 80 3e-15
Medtr1g097440.2 | polyadenylate-binding protein | HC | chr1:4396... 76 8e-14
Medtr1g097440.1 | polyadenylate-binding protein | HC | chr1:4396... 76 8e-14
Medtr1g020080.1 | polyadenylate-binding protein RBP47C | HC | ch... 75 2e-13
Medtr7g102730.1 | polyadenylate-binding protein | HC | chr7:4165... 74 3e-13
Medtr3g101370.1 | polyadenylate-binding protein RBP47C | HC | ch... 68 2e-11
Medtr2g097960.1 | polyadenylate-binding protein RBP47B | HC | ch... 66 1e-10
Medtr3g027140.1 | RNA-binding (RRM/RBD/RNP motif) family protein... 64 3e-10
Medtr3g065190.1 | RNA-binding (RRM/RBD/RNP motif) family protein... 64 3e-10
Medtr4g086600.1 | polyadenylate-binding protein RBP47B | HC | ch... 63 6e-10
Medtr4g122650.1 | flowering time control FCA-like protein | HC |... 63 7e-10
Medtr1g045510.1 | RNA-binding (RRM/RBD/RNP motif) family protein... 63 8e-10
Medtr1g061870.1 | polyadenylate-binding plant protein, putative ... 62 1e-09
Medtr3g082650.1 | RNA recognition motif, a.k.a. RRM, RBD protein... 62 2e-09
Medtr1g115375.1 | RNA recognition motif, a.k.a. RRM, RBD protein... 61 3e-09
Medtr3g055990.2 | heterogeneous nuclear ribonucleoprotein 27C, p... 60 5e-09
Medtr3g055990.1 | heterogeneous nuclear ribonucleoprotein 27C, p... 60 6e-09
Medtr6g004810.1 | RNA-binding (RRM/RBD/RNP motif) family protein... 60 6e-09
Medtr6g040070.1 | DEAD/DEAH-box helicase | HC | chr6:14397151-14... 60 6e-09
Medtr5g097580.2 | RNA-binding (RRM/RBD/RNP motif) family protein... 59 8e-09
Medtr5g097580.1 | RNA-binding (RRM/RBD/RNP motif) family protein... 59 8e-09
Medtr5g017280.4 | RNA-binding (RRM/RBD/RNP motif) family protein... 59 1e-08
Medtr5g017280.2 | RNA-binding (RRM/RBD/RNP motif) family protein... 59 1e-08
Medtr5g017280.3 | RNA-binding (RRM/RBD/RNP motif) family protein... 59 1e-08
Medtr5g017280.1 | RNA-binding (RRM/RBD/RNP motif) family protein... 59 1e-08
Medtr7g013740.1 | RNA-binding (RRM/RBD/RNP motif) family protein... 59 1e-08
Medtr2g026180.2 | RNA-binding (RRM/RBD/RNP motif) family protein... 58 2e-08
Medtr2g026180.3 | RNA-binding (RRM/RBD/RNP motif) family protein... 58 2e-08
Medtr2g026180.1 | RNA-binding (RRM/RBD/RNP motif) family protein... 58 2e-08
Medtr4g104470.1 | 31 kDa ribonucleoprotein | HC | chr4:43224367-... 57 3e-08
Medtr4g109540.1 | RNA-binding (RRM/RBD/RNP motif) family protein... 57 4e-08
Medtr7g013730.1 | RNA-binding (RRM/RBD/RNP motif) family protein... 56 7e-08
Medtr7g013730.2 | RNA-binding (RRM/RBD/RNP motif) family protein... 56 7e-08
Medtr1g056520.1 | RNA recognition motif, a.k.a. RRM, RBD protein... 55 1e-07
Medtr1g056520.2 | RNA recognition motif, a.k.a. RRM, RBD protein... 55 1e-07
Medtr3g075500.1 | 31 kDa ribonucleoprotein | HC | chr3:34381451-... 55 2e-07
Medtr3g075500.2 | 31 kDa ribonucleoprotein | HC | chr3:34381440-... 55 2e-07
Medtr1g097280.1 | cleavage stimulating factor, putative | HC | c... 55 2e-07
Medtr8g022050.1 | nucleolysin TIAR-like protein | HC | chr8:7704... 54 3e-07
Medtr3g084040.1 | RNA-binding (RRM/RBD/RNP motif) family protein... 54 3e-07
Medtr4g088010.1 | heterogeneous nuclear ribonucleoprotein | HC |... 54 4e-07
Medtr3g025880.2 | RNA-binding (RRM/RBD/RNP motif) family protein... 54 4e-07
Medtr3g025880.1 | RNA-binding (RRM/RBD/RNP motif) family protein... 54 4e-07
Medtr4g074930.4 | RNA recognition motif, a.k.a. RRM, RBD protein... 54 4e-07
Medtr4g124940.1 | nucleolysin TIAR-like protein | HC | chr4:5182... 54 4e-07
Medtr3g080130.1 | RNA-binding (RRM/RBD/RNP motif) family protein... 54 5e-07
Medtr7g109810.1 | flowering time control FCA-like protein | HC |... 54 5e-07
Medtr4g074930.3 | RNA recognition motif, a.k.a. RRM, RBD protein... 54 5e-07
Medtr7g109810.2 | flowering time control FCA-like protein | HC |... 53 7e-07
Medtr4g074930.1 | RNA recognition motif, a.k.a. RRM, RBD protein... 53 7e-07
Medtr7g106440.1 | 33 kDa ribonucleoprotein | HC | chr7:43324307-... 53 7e-07
Medtr7g094660.1 | RNA-binding (RRM/RBD/RNP motif) family protein... 53 8e-07
Medtr4g074930.2 | RNA recognition motif, a.k.a. RRM, RBD protein... 53 8e-07
Medtr3g098620.5 | RNA recognition motif 1 in plant MEI2-like pro... 52 1e-06
Medtr3g098620.3 | RNA recognition motif 1 in plant MEI2-like pro... 52 1e-06
Medtr3g098620.2 | RNA recognition motif 1 in plant MEI2-like pro... 52 1e-06
Medtr3g098620.4 | RNA recognition motif 1 in plant MEI2-like pro... 52 1e-06
Medtr3g098620.1 | RNA recognition motif 1 in plant MEI2-like pro... 52 1e-06
Medtr1g092860.1 | RNA-binding (RRM/RBD/RNP motif) family protein... 52 1e-06
Medtr3g448370.3 | RNA recognition motif 2 in plant MEI2-like pro... 52 2e-06
Medtr3g448370.4 | RNA recognition motif 2 in plant MEI2-like pro... 52 2e-06
Medtr3g448370.2 | RNA recognition motif 2 in plant MEI2-like pro... 52 2e-06
Medtr3g448370.1 | RNA recognition motif 2 in plant MEI2-like pro... 52 2e-06
Medtr3g448370.5 | RNA recognition motif 2 in plant MEI2-like pro... 52 2e-06
Medtr3g084040.2 | RNA-binding (RRM/RBD/RNP motif) family protein... 52 2e-06
Medtr4g109540.2 | RNA-binding (RRM/RBD/RNP motif) family protein... 51 2e-06
Medtr7g107580.3 | RNA-binding (RRM/RBD/RNP motif) family protein... 51 3e-06
Medtr7g107580.1 | RNA-binding (RRM/RBD/RNP motif) family protein... 51 3e-06
Medtr4g063560.1 | RNA recognition motif, a.k.a. RRM, RBD protein... 51 3e-06
Medtr5g070100.1 | RNA recognition motif (RRM) containing protein... 50 5e-06
Medtr8g092550.1 | CC1-like splicing factor | HC | chr8:38688579-... 50 5e-06
Medtr7g107580.2 | RNA-binding (RRM/RBD/RNP motif) family protein... 50 6e-06
Medtr7g109810.3 | flowering time control FCA-like protein | HC |... 50 7e-06
Medtr1g020080.2 | polyadenylate-binding protein RBP47C | HC | ch... 49 9e-06
>Medtr7g104800.2 | RNA recognition motif, a.k.a. RRM, RBD protein |
HC | chr7:42489150-42483010 | 20130731
Length = 477
Score = 520 bits (1338), Expect = e-147, Method: Compositional matrix adjust.
Identities = 282/462 (61%), Positives = 309/462 (66%), Gaps = 17/462 (3%)
Query: 4 MPGTRQRDVTAQXXXXXXXXXXXXXXTDSDEQVDFDGDNDQXXXXXXXXXXXXXXXXXXX 63
MPGTRQ+D TA+ TDS EQVD DGDNDQ
Sbjct: 1 MPGTRQKDATARNSESPGGNSEPEKPTDSGEQVDLDGDNDQEESSEEEVEYEEVEVEEEV 60
Query: 64 XXXXXXXXXXXXXXXXXXXXSKPSDGEEEMRVDHTNDEVEKKKHAELLALPPHGSEVYIG 123
SKP D E DE +KKKHAELLALPPHGSEVYIG
Sbjct: 61 EEEEEEEEEEEVEEE-----SKPLDEE---------DEADKKKHAELLALPPHGSEVYIG 106
Query: 124 GIANNVSEEDLRVFCQSVGEVSEVRIMKAKESGEGKGYAFVAFKTKELASQAIEELNNSE 183
GI + SE+DLRVFCQSVGEV+EVR+MK KE+ KGYAFV FKTKELAS+A++ELNNSE
Sbjct: 107 GIPHETSEKDLRVFCQSVGEVAEVRVMKGKEA---KGYAFVTFKTKELASKALKELNNSE 163
Query: 184 FKGKKIKCSSSQAKHRLFIGNIPKKWTVEDMKKVVADVGPGVISIELLKDLQSSGRNRGF 243
FKG+KIKCS SQ KHRLFIG++PK+WTVEDMKKVVA VGPGVIS+ELLKD QSS RNRGF
Sbjct: 164 FKGRKIKCSPSQVKHRLFIGSVPKEWTVEDMKKVVAKVGPGVISVELLKDPQSSSRNRGF 223
Query: 244 AFIEYYNHACAEYSRQKMSNSNFKLENNAPTVSWADPRNSESSAVSQVKAVYVKNLPENI 303
AFIEY+NHACAEYSRQKMSNSNFKL+NN VSWADPRNSESS+ SQVKAVYVKNLPENI
Sbjct: 224 AFIEYHNHACAEYSRQKMSNSNFKLDNNDAIVSWADPRNSESSSSSQVKAVYVKNLPENI 283
Query: 304 TQDSLKKLFEHHGKITKVVLPPAKAGQEKSRFGFVHFSDRSSAMKALKNTEKYEIDGKNL 363
TQ+ LK+LFEHHGKITKV LPPAKAGQEKSR+GFVHF+DRSSAMKALKNTEKYEI+G+ L
Sbjct: 284 TQNRLKELFEHHGKITKVALPPAKAGQEKSRYGFVHFADRSSAMKALKNTEKYEINGQTL 343
Query: 364 ECSLAKPQADQRSSGTSNSQKPVVLPTYPHRLXXXXXXXXXXXXXXXXXXXXXXQPLXXX 423
ECSLAKPQADQ+SSG SNS VLP YP L PL
Sbjct: 344 ECSLAKPQADQKSSGASNSFNSAVLPAYPPPLGYGMVGGGYGAVGAGYGAAGFAPPLMYG 403
Query: 424 XXXXXXXXXXXXXXXXXXRIGYVVXXXXXXXXXXXXHAPSPV 465
RI YV+ HAPSPV
Sbjct: 404 PGATPAGMTMMPMLLPDGRIAYVLQQPGLQQPSFQQHAPSPV 445
>Medtr7g104800.1 | RNA recognition motif, a.k.a. RRM, RBD protein |
HC | chr7:42489150-42483010 | 20130731
Length = 477
Score = 520 bits (1338), Expect = e-147, Method: Compositional matrix adjust.
Identities = 282/462 (61%), Positives = 309/462 (66%), Gaps = 17/462 (3%)
Query: 4 MPGTRQRDVTAQXXXXXXXXXXXXXXTDSDEQVDFDGDNDQXXXXXXXXXXXXXXXXXXX 63
MPGTRQ+D TA+ TDS EQVD DGDNDQ
Sbjct: 1 MPGTRQKDATARNSESPGGNSEPEKPTDSGEQVDLDGDNDQEESSEEEVEYEEVEVEEEV 60
Query: 64 XXXXXXXXXXXXXXXXXXXXSKPSDGEEEMRVDHTNDEVEKKKHAELLALPPHGSEVYIG 123
SKP D E DE +KKKHAELLALPPHGSEVYIG
Sbjct: 61 EEEEEEEEEEEVEEE-----SKPLDEE---------DEADKKKHAELLALPPHGSEVYIG 106
Query: 124 GIANNVSEEDLRVFCQSVGEVSEVRIMKAKESGEGKGYAFVAFKTKELASQAIEELNNSE 183
GI + SE+DLRVFCQSVGEV+EVR+MK KE+ KGYAFV FKTKELAS+A++ELNNSE
Sbjct: 107 GIPHETSEKDLRVFCQSVGEVAEVRVMKGKEA---KGYAFVTFKTKELASKALKELNNSE 163
Query: 184 FKGKKIKCSSSQAKHRLFIGNIPKKWTVEDMKKVVADVGPGVISIELLKDLQSSGRNRGF 243
FKG+KIKCS SQ KHRLFIG++PK+WTVEDMKKVVA VGPGVIS+ELLKD QSS RNRGF
Sbjct: 164 FKGRKIKCSPSQVKHRLFIGSVPKEWTVEDMKKVVAKVGPGVISVELLKDPQSSSRNRGF 223
Query: 244 AFIEYYNHACAEYSRQKMSNSNFKLENNAPTVSWADPRNSESSAVSQVKAVYVKNLPENI 303
AFIEY+NHACAEYSRQKMSNSNFKL+NN VSWADPRNSESS+ SQVKAVYVKNLPENI
Sbjct: 224 AFIEYHNHACAEYSRQKMSNSNFKLDNNDAIVSWADPRNSESSSSSQVKAVYVKNLPENI 283
Query: 304 TQDSLKKLFEHHGKITKVVLPPAKAGQEKSRFGFVHFSDRSSAMKALKNTEKYEIDGKNL 363
TQ+ LK+LFEHHGKITKV LPPAKAGQEKSR+GFVHF+DRSSAMKALKNTEKYEI+G+ L
Sbjct: 284 TQNRLKELFEHHGKITKVALPPAKAGQEKSRYGFVHFADRSSAMKALKNTEKYEINGQTL 343
Query: 364 ECSLAKPQADQRSSGTSNSQKPVVLPTYPHRLXXXXXXXXXXXXXXXXXXXXXXQPLXXX 423
ECSLAKPQADQ+SSG SNS VLP YP L PL
Sbjct: 344 ECSLAKPQADQKSSGASNSFNSAVLPAYPPPLGYGMVGGGYGAVGAGYGAAGFAPPLMYG 403
Query: 424 XXXXXXXXXXXXXXXXXXRIGYVVXXXXXXXXXXXXHAPSPV 465
RI YV+ HAPSPV
Sbjct: 404 PGATPAGMTMMPMLLPDGRIAYVLQQPGLQQPSFQQHAPSPV 445
>Medtr7g104800.4 | RNA recognition motif, a.k.a. RRM, RBD protein |
HC | chr7:42488464-42483010 | 20130731
Length = 477
Score = 520 bits (1338), Expect = e-147, Method: Compositional matrix adjust.
Identities = 282/462 (61%), Positives = 309/462 (66%), Gaps = 17/462 (3%)
Query: 4 MPGTRQRDVTAQXXXXXXXXXXXXXXTDSDEQVDFDGDNDQXXXXXXXXXXXXXXXXXXX 63
MPGTRQ+D TA+ TDS EQVD DGDNDQ
Sbjct: 1 MPGTRQKDATARNSESPGGNSEPEKPTDSGEQVDLDGDNDQEESSEEEVEYEEVEVEEEV 60
Query: 64 XXXXXXXXXXXXXXXXXXXXSKPSDGEEEMRVDHTNDEVEKKKHAELLALPPHGSEVYIG 123
SKP D E DE +KKKHAELLALPPHGSEVYIG
Sbjct: 61 EEEEEEEEEEEVEEE-----SKPLDEE---------DEADKKKHAELLALPPHGSEVYIG 106
Query: 124 GIANNVSEEDLRVFCQSVGEVSEVRIMKAKESGEGKGYAFVAFKTKELASQAIEELNNSE 183
GI + SE+DLRVFCQSVGEV+EVR+MK KE+ KGYAFV FKTKELAS+A++ELNNSE
Sbjct: 107 GIPHETSEKDLRVFCQSVGEVAEVRVMKGKEA---KGYAFVTFKTKELASKALKELNNSE 163
Query: 184 FKGKKIKCSSSQAKHRLFIGNIPKKWTVEDMKKVVADVGPGVISIELLKDLQSSGRNRGF 243
FKG+KIKCS SQ KHRLFIG++PK+WTVEDMKKVVA VGPGVIS+ELLKD QSS RNRGF
Sbjct: 164 FKGRKIKCSPSQVKHRLFIGSVPKEWTVEDMKKVVAKVGPGVISVELLKDPQSSSRNRGF 223
Query: 244 AFIEYYNHACAEYSRQKMSNSNFKLENNAPTVSWADPRNSESSAVSQVKAVYVKNLPENI 303
AFIEY+NHACAEYSRQKMSNSNFKL+NN VSWADPRNSESS+ SQVKAVYVKNLPENI
Sbjct: 224 AFIEYHNHACAEYSRQKMSNSNFKLDNNDAIVSWADPRNSESSSSSQVKAVYVKNLPENI 283
Query: 304 TQDSLKKLFEHHGKITKVVLPPAKAGQEKSRFGFVHFSDRSSAMKALKNTEKYEIDGKNL 363
TQ+ LK+LFEHHGKITKV LPPAKAGQEKSR+GFVHF+DRSSAMKALKNTEKYEI+G+ L
Sbjct: 284 TQNRLKELFEHHGKITKVALPPAKAGQEKSRYGFVHFADRSSAMKALKNTEKYEINGQTL 343
Query: 364 ECSLAKPQADQRSSGTSNSQKPVVLPTYPHRLXXXXXXXXXXXXXXXXXXXXXXQPLXXX 423
ECSLAKPQADQ+SSG SNS VLP YP L PL
Sbjct: 344 ECSLAKPQADQKSSGASNSFNSAVLPAYPPPLGYGMVGGGYGAVGAGYGAAGFAPPLMYG 403
Query: 424 XXXXXXXXXXXXXXXXXXRIGYVVXXXXXXXXXXXXHAPSPV 465
RI YV+ HAPSPV
Sbjct: 404 PGATPAGMTMMPMLLPDGRIAYVLQQPGLQQPSFQQHAPSPV 445
>Medtr7g104800.3 | RNA recognition motif, a.k.a. RRM, RBD protein |
HC | chr7:42489150-42483010 | 20130731
Length = 477
Score = 520 bits (1338), Expect = e-147, Method: Compositional matrix adjust.
Identities = 282/462 (61%), Positives = 309/462 (66%), Gaps = 17/462 (3%)
Query: 4 MPGTRQRDVTAQXXXXXXXXXXXXXXTDSDEQVDFDGDNDQXXXXXXXXXXXXXXXXXXX 63
MPGTRQ+D TA+ TDS EQVD DGDNDQ
Sbjct: 1 MPGTRQKDATARNSESPGGNSEPEKPTDSGEQVDLDGDNDQEESSEEEVEYEEVEVEEEV 60
Query: 64 XXXXXXXXXXXXXXXXXXXXSKPSDGEEEMRVDHTNDEVEKKKHAELLALPPHGSEVYIG 123
SKP D E DE +KKKHAELLALPPHGSEVYIG
Sbjct: 61 EEEEEEEEEEEVEEE-----SKPLDEE---------DEADKKKHAELLALPPHGSEVYIG 106
Query: 124 GIANNVSEEDLRVFCQSVGEVSEVRIMKAKESGEGKGYAFVAFKTKELASQAIEELNNSE 183
GI + SE+DLRVFCQSVGEV+EVR+MK KE+ KGYAFV FKTKELAS+A++ELNNSE
Sbjct: 107 GIPHETSEKDLRVFCQSVGEVAEVRVMKGKEA---KGYAFVTFKTKELASKALKELNNSE 163
Query: 184 FKGKKIKCSSSQAKHRLFIGNIPKKWTVEDMKKVVADVGPGVISIELLKDLQSSGRNRGF 243
FKG+KIKCS SQ KHRLFIG++PK+WTVEDMKKVVA VGPGVIS+ELLKD QSS RNRGF
Sbjct: 164 FKGRKIKCSPSQVKHRLFIGSVPKEWTVEDMKKVVAKVGPGVISVELLKDPQSSSRNRGF 223
Query: 244 AFIEYYNHACAEYSRQKMSNSNFKLENNAPTVSWADPRNSESSAVSQVKAVYVKNLPENI 303
AFIEY+NHACAEYSRQKMSNSNFKL+NN VSWADPRNSESS+ SQVKAVYVKNLPENI
Sbjct: 224 AFIEYHNHACAEYSRQKMSNSNFKLDNNDAIVSWADPRNSESSSSSQVKAVYVKNLPENI 283
Query: 304 TQDSLKKLFEHHGKITKVVLPPAKAGQEKSRFGFVHFSDRSSAMKALKNTEKYEIDGKNL 363
TQ+ LK+LFEHHGKITKV LPPAKAGQEKSR+GFVHF+DRSSAMKALKNTEKYEI+G+ L
Sbjct: 284 TQNRLKELFEHHGKITKVALPPAKAGQEKSRYGFVHFADRSSAMKALKNTEKYEINGQTL 343
Query: 364 ECSLAKPQADQRSSGTSNSQKPVVLPTYPHRLXXXXXXXXXXXXXXXXXXXXXXQPLXXX 423
ECSLAKPQADQ+SSG SNS VLP YP L PL
Sbjct: 344 ECSLAKPQADQKSSGASNSFNSAVLPAYPPPLGYGMVGGGYGAVGAGYGAAGFAPPLMYG 403
Query: 424 XXXXXXXXXXXXXXXXXXRIGYVVXXXXXXXXXXXXHAPSPV 465
RI YV+ HAPSPV
Sbjct: 404 PGATPAGMTMMPMLLPDGRIAYVLQQPGLQQPSFQQHAPSPV 445
>Medtr4g052940.3 | RNA recognition motif, a.k.a. RRM, RBD protein |
HC | chr4:19205591-19210680 | 20130731
Length = 504
Score = 436 bits (1120), Expect = e-122, Method: Compositional matrix adjust.
Identities = 201/293 (68%), Positives = 254/293 (86%), Gaps = 1/293 (0%)
Query: 100 DEVEKKKHAELLALPPHGSEVYIGGIANNVSEEDLRVFCQSVGEVSEVRIMKAKESGEGK 159
D+ EKKKHAELL+LPPH SEVY+GGI + EDL+ FC+ +GEV +VRIMK K++ E K
Sbjct: 92 DDDEKKKHAELLSLPPHKSEVYVGGIPLDAKSEDLKEFCERIGEVVQVRIMKGKDASENK 151
Query: 160 GYAFVAFKTKELASQAIEELNNSEFKGKKIKCSSSQAKHRLFIGNIPKKWTVEDMKKVVA 219
G+AFV ++ ELAS+AIEELNN+EFKG+KIKCS+SQAK+RLFIGNIP+ W +D+KKVV
Sbjct: 152 GFAFVTYRNVELASKAIEELNNTEFKGRKIKCSTSQAKNRLFIGNIPRSWGEKDLKKVVT 211
Query: 220 DVGPGVISIELLKDLQSSGRNRGFAFIEYYNHACAEYSRQKMSNSNFKLENNAPTVSWAD 279
D+GPGV ++EL+KD+++ NRGFAFI+Y+N+ CAEY RQKM + +FKL +N+PTVSWAD
Sbjct: 212 DIGPGVTAVELVKDMKNISNNRGFAFIDYHNNQCAEYGRQKMMSPSFKLGDNSPTVSWAD 271
Query: 280 PRNSESSAVSQVKAVYVKNLPENITQDSLKKLFEHHGKITKVVLPPAKAGQEKSRFGFVH 339
P+NS+SSA SQVKAVYVKNLP+N+TQ+ LKKLFEHHGKITKVVLPP K+GQEK+R GFVH
Sbjct: 272 PKNSDSSASSQVKAVYVKNLPKNVTQEQLKKLFEHHGKITKVVLPPPKSGQEKNRIGFVH 331
Query: 340 FSDRSSAMKALKNTEKYEIDGKNLECSLAKPQADQRSSGTSNSQKPVVLPTYP 392
F++RS+AMKALKNTE+YE+DG+NLECSLAKPQADQ++ SN+Q +LP+YP
Sbjct: 332 FAERSNAMKALKNTERYELDGQNLECSLAKPQADQKAV-VSNTQTQGLLPSYP 383
>Medtr4g052940.2 | RNA recognition motif, a.k.a. RRM, RBD protein |
HC | chr4:19205591-19210680 | 20130731
Length = 504
Score = 436 bits (1120), Expect = e-122, Method: Compositional matrix adjust.
Identities = 201/293 (68%), Positives = 254/293 (86%), Gaps = 1/293 (0%)
Query: 100 DEVEKKKHAELLALPPHGSEVYIGGIANNVSEEDLRVFCQSVGEVSEVRIMKAKESGEGK 159
D+ EKKKHAELL+LPPH SEVY+GGI + EDL+ FC+ +GEV +VRIMK K++ E K
Sbjct: 92 DDDEKKKHAELLSLPPHKSEVYVGGIPLDAKSEDLKEFCERIGEVVQVRIMKGKDASENK 151
Query: 160 GYAFVAFKTKELASQAIEELNNSEFKGKKIKCSSSQAKHRLFIGNIPKKWTVEDMKKVVA 219
G+AFV ++ ELAS+AIEELNN+EFKG+KIKCS+SQAK+RLFIGNIP+ W +D+KKVV
Sbjct: 152 GFAFVTYRNVELASKAIEELNNTEFKGRKIKCSTSQAKNRLFIGNIPRSWGEKDLKKVVT 211
Query: 220 DVGPGVISIELLKDLQSSGRNRGFAFIEYYNHACAEYSRQKMSNSNFKLENNAPTVSWAD 279
D+GPGV ++EL+KD+++ NRGFAFI+Y+N+ CAEY RQKM + +FKL +N+PTVSWAD
Sbjct: 212 DIGPGVTAVELVKDMKNISNNRGFAFIDYHNNQCAEYGRQKMMSPSFKLGDNSPTVSWAD 271
Query: 280 PRNSESSAVSQVKAVYVKNLPENITQDSLKKLFEHHGKITKVVLPPAKAGQEKSRFGFVH 339
P+NS+SSA SQVKAVYVKNLP+N+TQ+ LKKLFEHHGKITKVVLPP K+GQEK+R GFVH
Sbjct: 272 PKNSDSSASSQVKAVYVKNLPKNVTQEQLKKLFEHHGKITKVVLPPPKSGQEKNRIGFVH 331
Query: 340 FSDRSSAMKALKNTEKYEIDGKNLECSLAKPQADQRSSGTSNSQKPVVLPTYP 392
F++RS+AMKALKNTE+YE+DG+NLECSLAKPQADQ++ SN+Q +LP+YP
Sbjct: 332 FAERSNAMKALKNTERYELDGQNLECSLAKPQADQKAV-VSNTQTQGLLPSYP 383
>Medtr4g052940.1 | RNA recognition motif, a.k.a. RRM, RBD protein |
HC | chr4:19205591-19210680 | 20130731
Length = 504
Score = 436 bits (1120), Expect = e-122, Method: Compositional matrix adjust.
Identities = 201/293 (68%), Positives = 254/293 (86%), Gaps = 1/293 (0%)
Query: 100 DEVEKKKHAELLALPPHGSEVYIGGIANNVSEEDLRVFCQSVGEVSEVRIMKAKESGEGK 159
D+ EKKKHAELL+LPPH SEVY+GGI + EDL+ FC+ +GEV +VRIMK K++ E K
Sbjct: 92 DDDEKKKHAELLSLPPHKSEVYVGGIPLDAKSEDLKEFCERIGEVVQVRIMKGKDASENK 151
Query: 160 GYAFVAFKTKELASQAIEELNNSEFKGKKIKCSSSQAKHRLFIGNIPKKWTVEDMKKVVA 219
G+AFV ++ ELAS+AIEELNN+EFKG+KIKCS+SQAK+RLFIGNIP+ W +D+KKVV
Sbjct: 152 GFAFVTYRNVELASKAIEELNNTEFKGRKIKCSTSQAKNRLFIGNIPRSWGEKDLKKVVT 211
Query: 220 DVGPGVISIELLKDLQSSGRNRGFAFIEYYNHACAEYSRQKMSNSNFKLENNAPTVSWAD 279
D+GPGV ++EL+KD+++ NRGFAFI+Y+N+ CAEY RQKM + +FKL +N+PTVSWAD
Sbjct: 212 DIGPGVTAVELVKDMKNISNNRGFAFIDYHNNQCAEYGRQKMMSPSFKLGDNSPTVSWAD 271
Query: 280 PRNSESSAVSQVKAVYVKNLPENITQDSLKKLFEHHGKITKVVLPPAKAGQEKSRFGFVH 339
P+NS+SSA SQVKAVYVKNLP+N+TQ+ LKKLFEHHGKITKVVLPP K+GQEK+R GFVH
Sbjct: 272 PKNSDSSASSQVKAVYVKNLPKNVTQEQLKKLFEHHGKITKVVLPPPKSGQEKNRIGFVH 331
Query: 340 FSDRSSAMKALKNTEKYEIDGKNLECSLAKPQADQRSSGTSNSQKPVVLPTYP 392
F++RS+AMKALKNTE+YE+DG+NLECSLAKPQADQ++ SN+Q +LP+YP
Sbjct: 332 FAERSNAMKALKNTERYELDGQNLECSLAKPQADQKAV-VSNTQTQGLLPSYP 383
>Medtr7g010360.1 | RNA recognition motif, a.k.a. RRM, RBD protein |
LC | chr7:2533493-2542856 | 20130731
Length = 752
Score = 399 bits (1024), Expect = e-111, Method: Compositional matrix adjust.
Identities = 188/294 (63%), Positives = 243/294 (82%), Gaps = 1/294 (0%)
Query: 99 NDEVEKKKHAELLALPPHGSEVYIGGIANNVSEEDLRVFCQSVGEVSEVRIMKAKESGEG 158
+D+ EKKKHAELL+LP H SEVY+GGI + EDL+ FC+ +GEV +VRI K K++ E
Sbjct: 331 DDDDEKKKHAELLSLPHHKSEVYVGGIPLDAKTEDLKEFCECIGEVVQVRIFKGKDASEN 390
Query: 159 KGYAFVAFKTKELASQAIEELNNSEFKGKKIKCSSSQAKHRLFIGNIPKKWTVEDMKKVV 218
+G+AFV +++ ELAS+AI+ELNN+EFK KIKCS SQAK RLFIGNIP+ W +D+KKVV
Sbjct: 391 RGFAFVTYRSIELASKAIKELNNTEFKAGKIKCSKSQAKSRLFIGNIPRSWGEKDLKKVV 450
Query: 219 ADVGPGVISIELLKDLQSSGRNRGFAFIEYYNHACAEYSRQKMSNSNFKLENNAPTVSWA 278
+D+GPGV ++EL+KD+++ NRG+AFI+Y+N+ CAEYSRQKM++ +FKL +N PTV+WA
Sbjct: 451 SDIGPGVTAVELIKDMKNISNNRGYAFIDYHNNQCAEYSRQKMTSPSFKLGDNFPTVNWA 510
Query: 279 DPRNSESSAVSQVKAVYVKNLPENITQDSLKKLFEHHGKITKVVLPPAKAGQEKSRFGFV 338
+P+N++SSA SQVK VYVKNLP+N+T++ LKKLFEHHGKITKVVLPP K GQEK+R GFV
Sbjct: 511 EPKNADSSASSQVKEVYVKNLPKNVTKEQLKKLFEHHGKITKVVLPPPKPGQEKNRIGFV 570
Query: 339 HFSDRSSAMKALKNTEKYEIDGKNLECSLAKPQADQRSSGTSNSQKPVVLPTYP 392
HF++RS+AMKALKNTEKY +DG+ LECSLAK QAD ++ SN Q LP YP
Sbjct: 571 HFAERSNAMKALKNTEKYVLDGQILECSLAKQQADPKAV-VSNIQTQGSLPRYP 623
>Medtr4g052940.4 | RNA recognition motif, a.k.a. RRM, RBD protein |
HC | chr4:19205591-19210680 | 20130731
Length = 354
Score = 397 bits (1021), Expect = e-111, Method: Compositional matrix adjust.
Identities = 181/261 (69%), Positives = 228/261 (87%)
Query: 100 DEVEKKKHAELLALPPHGSEVYIGGIANNVSEEDLRVFCQSVGEVSEVRIMKAKESGEGK 159
D+ EKKKHAELL+LPPH SEVY+GGI + EDL+ FC+ +GEV +VRIMK K++ E K
Sbjct: 92 DDDEKKKHAELLSLPPHKSEVYVGGIPLDAKSEDLKEFCERIGEVVQVRIMKGKDASENK 151
Query: 160 GYAFVAFKTKELASQAIEELNNSEFKGKKIKCSSSQAKHRLFIGNIPKKWTVEDMKKVVA 219
G+AFV ++ ELAS+AIEELNN+EFKG+KIKCS+SQAK+RLFIGNIP+ W +D+KKVV
Sbjct: 152 GFAFVTYRNVELASKAIEELNNTEFKGRKIKCSTSQAKNRLFIGNIPRSWGEKDLKKVVT 211
Query: 220 DVGPGVISIELLKDLQSSGRNRGFAFIEYYNHACAEYSRQKMSNSNFKLENNAPTVSWAD 279
D+GPGV ++EL+KD+++ NRGFAFI+Y+N+ CAEY RQKM + +FKL +N+PTVSWAD
Sbjct: 212 DIGPGVTAVELVKDMKNISNNRGFAFIDYHNNQCAEYGRQKMMSPSFKLGDNSPTVSWAD 271
Query: 280 PRNSESSAVSQVKAVYVKNLPENITQDSLKKLFEHHGKITKVVLPPAKAGQEKSRFGFVH 339
P+NS+SSA SQVKAVYVKNLP+N+TQ+ LKKLFEHHGKITKVVLPP K+GQEK+R GFVH
Sbjct: 272 PKNSDSSASSQVKAVYVKNLPKNVTQEQLKKLFEHHGKITKVVLPPPKSGQEKNRIGFVH 331
Query: 340 FSDRSSAMKALKNTEKYEIDG 360
F++RS+AMKALKNTE+YE+DG
Sbjct: 332 FAERSNAMKALKNTERYELDG 352
>Medtr7g118120.1 | RNA recognition motif, a.k.a. RRM, RBD protein |
HC | chr7:49025533-49031900 | 20130731
Length = 479
Score = 358 bits (920), Expect = 5e-99, Method: Compositional matrix adjust.
Identities = 162/281 (57%), Positives = 226/281 (80%), Gaps = 3/281 (1%)
Query: 100 DEVEKKKHAELLALPPHGSEVYIGGIANNVSEEDLRVFCQSVGEVSEVRIMKAKESGEGK 159
DE E++KH ELL+ PPHGSEV+IGG+ + S++D+R C+ +G++ E++++K +E+GE K
Sbjct: 86 DEEEREKHDELLSRPPHGSEVFIGGLPRDTSDDDVRELCEPMGDIVEIKLIKDRETGESK 145
Query: 160 GYAFVAFKTKELASQAIEELNNSEFKGKKIKCSSSQAKHRLFIGNIPKKWTVEDMKKVVA 219
GYAFV +KTKE+A +AI++++N EFKGK ++C S+ KHRLFIGNIPK WT ++ +K V
Sbjct: 146 GYAFVGYKTKEVAQKAIDDIHNKEFKGKTLRCLLSETKHRLFIGNIPKTWTEDEFRKAVE 205
Query: 220 DVGPGVISIELLKDLQSSGRNRGFAFIEYYNHACAEYSRQKMSNSNFKLENNAPTVSWAD 279
VGPGV SI+L+KD Q+ RNRGFAF+ YYN+ACA++SRQKMS+ FKL+ PTV+WAD
Sbjct: 206 GVGPGVESIDLIKDPQNQSRNRGFAFVLYYNNACADFSRQKMSSVGFKLDGITPTVTWAD 265
Query: 280 PRNS--ESSAVSQVKAVYVKNLPENITQDSLKKLFEHHGKITKVVLPPAKAGQEKSRFGF 337
P+ S +S+A SQVKA+YVKN+PEN+T + LK+LF HG++TKVV+PP KA K FGF
Sbjct: 266 PKTSPDQSAAASQVKALYVKNIPENVTTEQLKELFRRHGEVTKVVMPPGKASG-KRDFGF 324
Query: 338 VHFSDRSSAMKALKNTEKYEIDGKNLECSLAKPQADQRSSG 378
+H+++RSSA+KA+K TEKYEIDG+ LE +AKPQA+++ G
Sbjct: 325 IHYAERSSALKAVKETEKYEIDGQALEVVIAKPQAEKKPDG 365
>Medtr7g118120.3 | RNA recognition motif, a.k.a. RRM, RBD protein |
HC | chr7:49025533-49031887 | 20130731
Length = 479
Score = 358 bits (920), Expect = 5e-99, Method: Compositional matrix adjust.
Identities = 162/281 (57%), Positives = 226/281 (80%), Gaps = 3/281 (1%)
Query: 100 DEVEKKKHAELLALPPHGSEVYIGGIANNVSEEDLRVFCQSVGEVSEVRIMKAKESGEGK 159
DE E++KH ELL+ PPHGSEV+IGG+ + S++D+R C+ +G++ E++++K +E+GE K
Sbjct: 86 DEEEREKHDELLSRPPHGSEVFIGGLPRDTSDDDVRELCEPMGDIVEIKLIKDRETGESK 145
Query: 160 GYAFVAFKTKELASQAIEELNNSEFKGKKIKCSSSQAKHRLFIGNIPKKWTVEDMKKVVA 219
GYAFV +KTKE+A +AI++++N EFKGK ++C S+ KHRLFIGNIPK WT ++ +K V
Sbjct: 146 GYAFVGYKTKEVAQKAIDDIHNKEFKGKTLRCLLSETKHRLFIGNIPKTWTEDEFRKAVE 205
Query: 220 DVGPGVISIELLKDLQSSGRNRGFAFIEYYNHACAEYSRQKMSNSNFKLENNAPTVSWAD 279
VGPGV SI+L+KD Q+ RNRGFAF+ YYN+ACA++SRQKMS+ FKL+ PTV+WAD
Sbjct: 206 GVGPGVESIDLIKDPQNQSRNRGFAFVLYYNNACADFSRQKMSSVGFKLDGITPTVTWAD 265
Query: 280 PRNS--ESSAVSQVKAVYVKNLPENITQDSLKKLFEHHGKITKVVLPPAKAGQEKSRFGF 337
P+ S +S+A SQVKA+YVKN+PEN+T + LK+LF HG++TKVV+PP KA K FGF
Sbjct: 266 PKTSPDQSAAASQVKALYVKNIPENVTTEQLKELFRRHGEVTKVVMPPGKASG-KRDFGF 324
Query: 338 VHFSDRSSAMKALKNTEKYEIDGKNLECSLAKPQADQRSSG 378
+H+++RSSA+KA+K TEKYEIDG+ LE +AKPQA+++ G
Sbjct: 325 IHYAERSSALKAVKETEKYEIDGQALEVVIAKPQAEKKPDG 365
>Medtr7g118120.2 | RNA recognition motif, a.k.a. RRM, RBD protein |
HC | chr7:49025861-49031887 | 20130731
Length = 479
Score = 358 bits (920), Expect = 5e-99, Method: Compositional matrix adjust.
Identities = 162/281 (57%), Positives = 226/281 (80%), Gaps = 3/281 (1%)
Query: 100 DEVEKKKHAELLALPPHGSEVYIGGIANNVSEEDLRVFCQSVGEVSEVRIMKAKESGEGK 159
DE E++KH ELL+ PPHGSEV+IGG+ + S++D+R C+ +G++ E++++K +E+GE K
Sbjct: 86 DEEEREKHDELLSRPPHGSEVFIGGLPRDTSDDDVRELCEPMGDIVEIKLIKDRETGESK 145
Query: 160 GYAFVAFKTKELASQAIEELNNSEFKGKKIKCSSSQAKHRLFIGNIPKKWTVEDMKKVVA 219
GYAFV +KTKE+A +AI++++N EFKGK ++C S+ KHRLFIGNIPK WT ++ +K V
Sbjct: 146 GYAFVGYKTKEVAQKAIDDIHNKEFKGKTLRCLLSETKHRLFIGNIPKTWTEDEFRKAVE 205
Query: 220 DVGPGVISIELLKDLQSSGRNRGFAFIEYYNHACAEYSRQKMSNSNFKLENNAPTVSWAD 279
VGPGV SI+L+KD Q+ RNRGFAF+ YYN+ACA++SRQKMS+ FKL+ PTV+WAD
Sbjct: 206 GVGPGVESIDLIKDPQNQSRNRGFAFVLYYNNACADFSRQKMSSVGFKLDGITPTVTWAD 265
Query: 280 PRNS--ESSAVSQVKAVYVKNLPENITQDSLKKLFEHHGKITKVVLPPAKAGQEKSRFGF 337
P+ S +S+A SQVKA+YVKN+PEN+T + LK+LF HG++TKVV+PP KA K FGF
Sbjct: 266 PKTSPDQSAAASQVKALYVKNIPENVTTEQLKELFRRHGEVTKVVMPPGKASG-KRDFGF 324
Query: 338 VHFSDRSSAMKALKNTEKYEIDGKNLECSLAKPQADQRSSG 378
+H+++RSSA+KA+K TEKYEIDG+ LE +AKPQA+++ G
Sbjct: 325 IHYAERSSALKAVKETEKYEIDGQALEVVIAKPQAEKKPDG 365
>Medtr8g076100.3 | heterogeneous nuclear ribonucleoprotein | HC |
chr8:32212286-32219222 | 20130731
Length = 941
Score = 150 bits (380), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 89/260 (34%), Positives = 145/260 (55%), Gaps = 8/260 (3%)
Query: 119 EVYIGGIANNVSEEDLRVFCQSVGEVSEVRIMKAKESGEGKGYAFVAFKTKELASQAIEE 178
E+++GG+ + +EEDL+ Q +GEV EVR+ K + + +GYA V F KE A +A+ E
Sbjct: 419 EIFVGGLDRDTTEEDLKKIFQRIGEVLEVRLHKNSSTSKNRGYAVVRFANKEHAKKALSE 478
Query: 179 LNNSEFKGKKIKCSSSQAKHRLFIGNIPKKWTVEDMKKVVADVG-PGVISIELLKDLQSS 237
+ N +GK+ S S+ LF+GNI WT E +K+ + D G GV +I L+ D+Q
Sbjct: 479 MKNPVIRGKRCGTSPSEDNDTLFLGNICNTWTKEAVKQKLKDYGVEGVENITLVPDVQHE 538
Query: 238 GRNRGFAFIEYYNHACA--EYSRQKMSNSNFKLENNAPTVSWADP-RNSESSAVSQVKAV 294
G +RGFAF+E+ HA A Y R + F V++A+P R + ++QVK+V
Sbjct: 539 GLSRGFAFLEFSCHADAMLAYKRLQKPGVIFGHAERTAKVAFAEPIREPDPEIMAQVKSV 598
Query: 295 YVKNLPENITQDSLKKLFEHHGKITKVVLPPAKAGQEKSRFGFVHFSDRSSAMKALKNTE 354
++ LP + +D +++ + +G+I K+VL + ++ GFV FS +A+ +
Sbjct: 599 FINGLPLHWDEDHVREHLKSYGEIVKIVLARKMSTSKRKDHGFVDFSTHEAALACVDGVN 658
Query: 355 KYEI-DGKN---LECSLAKP 370
K E+ DG + L L+ P
Sbjct: 659 KSELGDGTSKIKLRARLSNP 678
>Medtr8g076100.1 | heterogeneous nuclear ribonucleoprotein | HC |
chr8:32212286-32219222 | 20130731
Length = 989
Score = 150 bits (380), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 89/260 (34%), Positives = 145/260 (55%), Gaps = 8/260 (3%)
Query: 119 EVYIGGIANNVSEEDLRVFCQSVGEVSEVRIMKAKESGEGKGYAFVAFKTKELASQAIEE 178
E+++GG+ + +EEDL+ Q +GEV EVR+ K + + +GYA V F KE A +A+ E
Sbjct: 419 EIFVGGLDRDTTEEDLKKIFQRIGEVLEVRLHKNSSTSKNRGYAVVRFANKEHAKKALSE 478
Query: 179 LNNSEFKGKKIKCSSSQAKHRLFIGNIPKKWTVEDMKKVVADVG-PGVISIELLKDLQSS 237
+ N +GK+ S S+ LF+GNI WT E +K+ + D G GV +I L+ D+Q
Sbjct: 479 MKNPVIRGKRCGTSPSEDNDTLFLGNICNTWTKEAVKQKLKDYGVEGVENITLVPDVQHE 538
Query: 238 GRNRGFAFIEYYNHACA--EYSRQKMSNSNFKLENNAPTVSWADP-RNSESSAVSQVKAV 294
G +RGFAF+E+ HA A Y R + F V++A+P R + ++QVK+V
Sbjct: 539 GLSRGFAFLEFSCHADAMLAYKRLQKPGVIFGHAERTAKVAFAEPIREPDPEIMAQVKSV 598
Query: 295 YVKNLPENITQDSLKKLFEHHGKITKVVLPPAKAGQEKSRFGFVHFSDRSSAMKALKNTE 354
++ LP + +D +++ + +G+I K+VL + ++ GFV FS +A+ +
Sbjct: 599 FINGLPLHWDEDHVREHLKSYGEIVKIVLARKMSTSKRKDHGFVDFSTHEAALACVDGVN 658
Query: 355 KYEI-DGKN---LECSLAKP 370
K E+ DG + L L+ P
Sbjct: 659 KSELGDGTSKIKLRARLSNP 678
>Medtr8g076100.2 | heterogeneous nuclear ribonucleoprotein | HC |
chr8:32212286-32219222 | 20130731
Length = 941
Score = 150 bits (380), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 89/260 (34%), Positives = 145/260 (55%), Gaps = 8/260 (3%)
Query: 119 EVYIGGIANNVSEEDLRVFCQSVGEVSEVRIMKAKESGEGKGYAFVAFKTKELASQAIEE 178
E+++GG+ + +EEDL+ Q +GEV EVR+ K + + +GYA V F KE A +A+ E
Sbjct: 419 EIFVGGLDRDTTEEDLKKIFQRIGEVLEVRLHKNSSTSKNRGYAVVRFANKEHAKKALSE 478
Query: 179 LNNSEFKGKKIKCSSSQAKHRLFIGNIPKKWTVEDMKKVVADVG-PGVISIELLKDLQSS 237
+ N +GK+ S S+ LF+GNI WT E +K+ + D G GV +I L+ D+Q
Sbjct: 479 MKNPVIRGKRCGTSPSEDNDTLFLGNICNTWTKEAVKQKLKDYGVEGVENITLVPDVQHE 538
Query: 238 GRNRGFAFIEYYNHACA--EYSRQKMSNSNFKLENNAPTVSWADP-RNSESSAVSQVKAV 294
G +RGFAF+E+ HA A Y R + F V++A+P R + ++QVK+V
Sbjct: 539 GLSRGFAFLEFSCHADAMLAYKRLQKPGVIFGHAERTAKVAFAEPIREPDPEIMAQVKSV 598
Query: 295 YVKNLPENITQDSLKKLFEHHGKITKVVLPPAKAGQEKSRFGFVHFSDRSSAMKALKNTE 354
++ LP + +D +++ + +G+I K+VL + ++ GFV FS +A+ +
Sbjct: 599 FINGLPLHWDEDHVREHLKSYGEIVKIVLARKMSTSKRKDHGFVDFSTHEAALACVDGVN 658
Query: 355 KYEI-DGKN---LECSLAKP 370
K E+ DG + L L+ P
Sbjct: 659 KSELGDGTSKIKLRARLSNP 678
>Medtr8g007390.2 | heterogeneous nuclear ribonucleoprotein | HC |
chr8:1510737-1506382 | 20130731
Length = 800
Score = 134 bits (336), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 85/267 (31%), Positives = 144/267 (53%), Gaps = 9/267 (3%)
Query: 119 EVYIGGIANNVSEEDLRVFCQSVGEVSEVRIMKAKESGEGKGYAFVAFKTKELASQAIEE 178
EV++GG+ + +E+DLR VG V+EVR+M ++ + KG+AF+ F+ E A +A+ E
Sbjct: 216 EVFVGGLDKDATEDDLRKVFSEVGVVTEVRLMMNPQTKKNKGFAFLRFENVEQAKRAVAE 275
Query: 179 LNNSEFKGKKIKCSSSQAKHRLFIGNIPKKWTVEDMKKVVADVG-PGVISIELLKDLQSS 237
L N GK+ + SQ L++GNI K WT E +K+ + G V I L++D
Sbjct: 276 LKNPVINGKQCGVTPSQDSDTLYLGNICKTWTKEALKEKLKHYGVTNVEDITLVEDSNDK 335
Query: 238 GRNRGFAFIEYYNHACAEYSRQKMSNSNFKLENNAPT-VSWADPR-NSESSAVSQVKAVY 295
G NRGFAF+E+ + + A + +++ + + P VS+AD + +SQVK V+
Sbjct: 336 GTNRGFAFLEFSSRSDAMDAFKRLQKRDVTFGVDKPAKVSFADSFIDPGDEIMSQVKTVF 395
Query: 296 VKNLPENITQDSLKKLFEHHGKITKVVLPPAKAGQEKSRFGFVHFSDRSSAMK---ALKN 352
+ LP + +D ++ L + +G++ K+ L + +GFV F +A++ ++
Sbjct: 396 IDALPPSWDEDYVRNLLKKYGEVEKIELARNMPAARRKDYGFVTFGSHDAAIRCADSITG 455
Query: 353 TEKYEIDGK-NLECSLAKPQADQRSSG 378
TE E D K + L++P QR G
Sbjct: 456 TELGEGDKKAKVRARLSRPL--QRGRG 480
>Medtr8g007390.1 | heterogeneous nuclear ribonucleoprotein | HC |
chr8:1510737-1506382 | 20130731
Length = 800
Score = 134 bits (336), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 85/267 (31%), Positives = 144/267 (53%), Gaps = 9/267 (3%)
Query: 119 EVYIGGIANNVSEEDLRVFCQSVGEVSEVRIMKAKESGEGKGYAFVAFKTKELASQAIEE 178
EV++GG+ + +E+DLR VG V+EVR+M ++ + KG+AF+ F+ E A +A+ E
Sbjct: 216 EVFVGGLDKDATEDDLRKVFSEVGVVTEVRLMMNPQTKKNKGFAFLRFENVEQAKRAVAE 275
Query: 179 LNNSEFKGKKIKCSSSQAKHRLFIGNIPKKWTVEDMKKVVADVG-PGVISIELLKDLQSS 237
L N GK+ + SQ L++GNI K WT E +K+ + G V I L++D
Sbjct: 276 LKNPVINGKQCGVTPSQDSDTLYLGNICKTWTKEALKEKLKHYGVTNVEDITLVEDSNDK 335
Query: 238 GRNRGFAFIEYYNHACAEYSRQKMSNSNFKLENNAPT-VSWADPR-NSESSAVSQVKAVY 295
G NRGFAF+E+ + + A + +++ + + P VS+AD + +SQVK V+
Sbjct: 336 GTNRGFAFLEFSSRSDAMDAFKRLQKRDVTFGVDKPAKVSFADSFIDPGDEIMSQVKTVF 395
Query: 296 VKNLPENITQDSLKKLFEHHGKITKVVLPPAKAGQEKSRFGFVHFSDRSSAMK---ALKN 352
+ LP + +D ++ L + +G++ K+ L + +GFV F +A++ ++
Sbjct: 396 IDALPPSWDEDYVRNLLKKYGEVEKIELARNMPAARRKDYGFVTFGSHDAAIRCADSITG 455
Query: 353 TEKYEIDGK-NLECSLAKPQADQRSSG 378
TE E D K + L++P QR G
Sbjct: 456 TELGEGDKKAKVRARLSRPL--QRGRG 480
>Medtr8g007390.3 | heterogeneous nuclear ribonucleoprotein | HC |
chr8:1510737-1506382 | 20130731
Length = 799
Score = 134 bits (336), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 85/267 (31%), Positives = 144/267 (53%), Gaps = 9/267 (3%)
Query: 119 EVYIGGIANNVSEEDLRVFCQSVGEVSEVRIMKAKESGEGKGYAFVAFKTKELASQAIEE 178
EV++GG+ + +E+DLR VG V+EVR+M ++ + KG+AF+ F+ E A +A+ E
Sbjct: 215 EVFVGGLDKDATEDDLRKVFSEVGVVTEVRLMMNPQTKKNKGFAFLRFENVEQAKRAVAE 274
Query: 179 LNNSEFKGKKIKCSSSQAKHRLFIGNIPKKWTVEDMKKVVADVG-PGVISIELLKDLQSS 237
L N GK+ + SQ L++GNI K WT E +K+ + G V I L++D
Sbjct: 275 LKNPVINGKQCGVTPSQDSDTLYLGNICKTWTKEALKEKLKHYGVTNVEDITLVEDSNDK 334
Query: 238 GRNRGFAFIEYYNHACAEYSRQKMSNSNFKLENNAPT-VSWADPR-NSESSAVSQVKAVY 295
G NRGFAF+E+ + + A + +++ + + P VS+AD + +SQVK V+
Sbjct: 335 GTNRGFAFLEFSSRSDAMDAFKRLQKRDVTFGVDKPAKVSFADSFIDPGDEIMSQVKTVF 394
Query: 296 VKNLPENITQDSLKKLFEHHGKITKVVLPPAKAGQEKSRFGFVHFSDRSSAMK---ALKN 352
+ LP + +D ++ L + +G++ K+ L + +GFV F +A++ ++
Sbjct: 395 IDALPPSWDEDYVRNLLKKYGEVEKIELARNMPAARRKDYGFVTFGSHDAAIRCADSITG 454
Query: 353 TEKYEIDGK-NLECSLAKPQADQRSSG 378
TE E D K + L++P QR G
Sbjct: 455 TELGEGDKKAKVRARLSRPL--QRGRG 479
>Medtr8g007390.4 | heterogeneous nuclear ribonucleoprotein | HC |
chr8:1510737-1506382 | 20130731
Length = 799
Score = 134 bits (336), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 85/267 (31%), Positives = 144/267 (53%), Gaps = 9/267 (3%)
Query: 119 EVYIGGIANNVSEEDLRVFCQSVGEVSEVRIMKAKESGEGKGYAFVAFKTKELASQAIEE 178
EV++GG+ + +E+DLR VG V+EVR+M ++ + KG+AF+ F+ E A +A+ E
Sbjct: 215 EVFVGGLDKDATEDDLRKVFSEVGVVTEVRLMMNPQTKKNKGFAFLRFENVEQAKRAVAE 274
Query: 179 LNNSEFKGKKIKCSSSQAKHRLFIGNIPKKWTVEDMKKVVADVG-PGVISIELLKDLQSS 237
L N GK+ + SQ L++GNI K WT E +K+ + G V I L++D
Sbjct: 275 LKNPVINGKQCGVTPSQDSDTLYLGNICKTWTKEALKEKLKHYGVTNVEDITLVEDSNDK 334
Query: 238 GRNRGFAFIEYYNHACAEYSRQKMSNSNFKLENNAPT-VSWADPR-NSESSAVSQVKAVY 295
G NRGFAF+E+ + + A + +++ + + P VS+AD + +SQVK V+
Sbjct: 335 GTNRGFAFLEFSSRSDAMDAFKRLQKRDVTFGVDKPAKVSFADSFIDPGDEIMSQVKTVF 394
Query: 296 VKNLPENITQDSLKKLFEHHGKITKVVLPPAKAGQEKSRFGFVHFSDRSSAMK---ALKN 352
+ LP + +D ++ L + +G++ K+ L + +GFV F +A++ ++
Sbjct: 395 IDALPPSWDEDYVRNLLKKYGEVEKIELARNMPAARRKDYGFVTFGSHDAAIRCADSITG 454
Query: 353 TEKYEIDGK-NLECSLAKPQADQRSSG 378
TE E D K + L++P QR G
Sbjct: 455 TELGEGDKKAKVRARLSRPL--QRGRG 479
>Medtr7g081210.1 | RNA recognition motif, a.k.a. RRM, RBD protein |
HC | chr7:30979896-30974591 | 20130731
Length = 782
Score = 106 bits (264), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 68/236 (28%), Positives = 126/236 (53%), Gaps = 5/236 (2%)
Query: 119 EVYIGGIANNVSEEDLRVFCQSVGEVSEVRIMKAKESGEGKGYAFVAFKTKELASQAIEE 178
EV++GG+ +E DLR VGE++EVR+ ++ KG+A + F+T E +A+ E
Sbjct: 195 EVFVGGLDKEATEHDLRKVFSKVGEITEVRMTVNPQTKRNKGFALLRFETVEHVKRALAE 254
Query: 179 LNNSEFKGKK--IKCSSSQAKHRLFIGNIPKKWTVEDMKKVVADVG-PGVISIELLKDLQ 235
L N GK+ I ++ Q L++ NI K W E +K+ + G + LL+D
Sbjct: 255 LKNPVINGKQCGITITTCQDSDTLYLDNICKSWKKEALKEKLKHYGVESFKDLTLLEDDN 314
Query: 236 SSGRNRGFAFIEYYNHACAEYSRQKMSNSNFKLENNAPT-VSWADPR-NSESSAVSQVKA 293
+ G N G AF+E+ +H+ ++ + +++ ++ + P VS+A+ + ++QVK
Sbjct: 315 NEGTNCGCAFLEFSSHSDSKDAYKRLQKTDVVFGVDKPAEVSFANSFIDLGDDIMAQVKT 374
Query: 294 VYVKNLPENITQDSLKKLFEHHGKITKVVLPPAKAGQEKSRFGFVHFSDRSSAMKA 349
V++ LP + +D ++ L + +G + KV L G + +GFV F ++A++
Sbjct: 375 VFIDLLPPSWDEDYVRALLKKYGAVEKVELAKNMPGARRKNYGFVTFGTHAAAVEC 430
>Medtr3g102040.1 | polyadenylate-binding protein | HC |
chr3:47012095-47003272 | 20130731
Length = 622
Score = 85.9 bits (211), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 65/234 (27%), Positives = 114/234 (48%), Gaps = 18/234 (7%)
Query: 118 SEVYIGGIANNVSEEDLRVFCQSVGEVSEVRIMKAKESGEGKGYAFVAFKTKELASQAIE 177
+ +Y+G + ++V++ L +G+V VRI + S + GY +V F A++A++
Sbjct: 24 TSLYVGDLDHDVTDSQLYDLFNQIGQVVSVRICRDLASQQSLGYGYVNFSNPHDAAKAMD 83
Query: 178 ELNNSEFKGKKIKCSSSQ--------AKHRLFIGNIPKKWTVEDMKKVVADVGPGVISIE 229
LN + K I+ S +FI N+ + + + + G ++S +
Sbjct: 84 VLNFTPLNNKPIRIMYSHRDPSVRKSGAANIFIKNLDRAIDHKALYDTFSIFG-NILSCK 142
Query: 230 LLKDLQSSGRNRGFAFIEYYNHACAEYSRQKMSNSNFKLENNAPT-VSWADPRNSESSAV 288
+ D +SG ++G+ F+++ N A+ + K+ N L N+ P V + +A+
Sbjct: 143 IAMD--ASGLSKGYGFVQFENEESAQSAIDKL---NGMLLNDKPVYVGHFQRKQDRDNAL 197
Query: 289 SQVKA--VYVKNLPENITQDSLKKLFEHHGKITKVVLPPAKAGQEKSRFGFVHF 340
S K VYVKNL E++T D LK F +G IT V+ G+ K FGFV+F
Sbjct: 198 SNAKFNNVYVKNLSESVTDDDLKNTFGEYGTITSAVVMRDVDGKSKC-FGFVNF 250
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 63/271 (23%), Positives = 112/271 (41%), Gaps = 37/271 (13%)
Query: 155 SGEGKGYAFVAFKTKELASQAIEELNNSEFKGKKIKCSSSQAK------------HRLFI 202
SG KGY FV F+ +E A AI++LN K + Q K + +++
Sbjct: 148 SGLSKGYGFVQFENEESAQSAIDKLNGMLLNDKPVYVGHFQRKQDRDNALSNAKFNNVYV 207
Query: 203 GNIPKKWTVEDMKKVVADVGPGVISIELLKDLQSSGRNRGFAFIEYYNHACAEYSRQKMS 262
N+ + T +D+K + G + S +++D+ G+++ F F+ + N A + + ++
Sbjct: 208 KNLSESVTDDDLKNTFGEYG-TITSAVVMRDV--DGKSKCFGFVNFENADAAAEAVEALN 264
Query: 263 NSNF------------KLENNAPTVSWADPRNSESSAVSQVKAVYVKNLPENITQDSLKK 310
F K E + E+ +Y+KNL +++T + L +
Sbjct: 265 GKKFDDKEWYVGKALKKYERELELKERHEQSMKETVDKFYGANLYLKNLDDSVTDEKLSE 324
Query: 311 LFEHHGKITKVVLPPAKAGQEKSRFGFVHFSDRSSAMKALKNTEKYEIDGKNLECSLAKP 370
LF G +T + G + GFV FS A +AL + GK L + A+
Sbjct: 325 LFSEFGTVTSCKILRDPQGISRGS-GFVAFSTPEEATRALAEMNGKMVAGKPLYVAPAQK 383
Query: 371 QADQ--RSSGTSNSQKPVV-------LPTYP 392
+ ++ R + +PV LP YP
Sbjct: 384 KEERKARLQAQFSQVRPVTMAPIAPRLPFYP 414
>Medtr4g131970.1 | polyadenylate-binding protein RBP47C | HC |
chr4:55111286-55115662 | 20130731
Length = 411
Score = 85.5 bits (210), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 66/297 (22%), Positives = 137/297 (46%), Gaps = 39/297 (13%)
Query: 112 ALPPHGS-----EVYIGGIANNVSEEDLRVFCQSVGEVSEVRIMKAKESGEGKGYAFVAF 166
A+PP S ++IG + + E L GEV V++++ K++ + +GY F+ F
Sbjct: 63 AVPPPSSADEVKTLWIGDLQYWMDENYLYNCFSHTGEVGSVKVIRNKQTNQSEGYGFLEF 122
Query: 167 KTKELASQAIEELNNS-------EFKGKKIKCSSSQAKH------RLFIGNIPKKWTVED 213
++ A + ++ N + F+ SS + +H +F+G++ +
Sbjct: 123 ISRAGAERVLQTFNGTIMPNGGQNFRLNWATFSSGEKRHDDSPDYTIFVGDLAADVSDHH 182
Query: 214 MKKVVADVGPGVISIELLKDLQSSGRNRGFAFIEYYNHA-------------CAEYSRQK 260
+ +V V +++ D +++GR +G+ F+ + + + C+ +
Sbjct: 183 LTEVFRTRYNSVKGAKVVID-RTTGRTKGYGFVRFADESEQMRAMTEMQGVLCSTRPMRI 241
Query: 261 MSNSNFKLENNAPTVSWADPR-NSESSAVSQVKAVYVKNLPENITQDSLKKLFEHHGKIT 319
SN L S+ +P+ +++ ++V NL N+T + LK++F +G++
Sbjct: 242 GPASNKNLGTQTSKASYQNPQGGAQNENDPNNTTIFVGNLDPNVTDEHLKQVFTQYGELV 301
Query: 320 KVVLPPAKAGQEKSRFGFVHFSDRSSAMKALKNTEKYEIDGKNLECSLAKPQADQRS 376
V +P K R GFV F+DRSSA +AL+ + G+N+ S + A++++
Sbjct: 302 HVKIPSGK------RCGFVQFADRSSAEEALRVLNGTLLGGQNVRLSWGRSPANKQT 352
>Medtr1g019150.1 | polyadenylate-binding protein | HC |
chr1:5708406-5713691 | 20130731
Length = 647
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 68/255 (26%), Positives = 119/255 (46%), Gaps = 18/255 (7%)
Query: 118 SEVYIGGIANNVSEEDLRVFCQSVGEVSEVRIMKAKESGEGKGYAFVAFKTKELASQAIE 177
+ +Y+G + NV++ L VG+V VR+ + + GY +V F + A++A++
Sbjct: 32 TSLYVGDLEVNVNDSQLYDLFNQVGQVVSVRVCRDLATRRSLGYGYVNFTNPQDAARALD 91
Query: 178 ELNNSEFKGKKIKC--------SSSQAKHRLFIGNIPKKWTVEDMKKVVADVGPGVISIE 229
LN + K I+ S +FI N+ K + + + G ++S +
Sbjct: 92 VLNFTPMNNKSIRVMYSHRDPSSRKSGTANIFIKNLDKTIDHKALHDTFSSFG-QIMSCK 150
Query: 230 LLKDLQSSGRNRGFAFIEYYNHACAEYSRQKMSNSNFKLENNAPTVSWADPRNSESSAV- 288
+ D SG+++G+ F+++ A+ + K+ N L N+ R + V
Sbjct: 151 IATD--GSGQSKGYGFVQFEAEDSAQNAIDKL---NGMLINDKQVFVGHFLRKQDRDNVL 205
Query: 289 --SQVKAVYVKNLPENITQDSLKKLFEHHGKITKVVLPPAKAGQEKSRFGFVHFSDRSSA 346
++ VYVKNL E+ T+D LK F +G IT VL G+ K FGFV+F + A
Sbjct: 206 SKTKFNNVYVKNLSESFTEDDLKNEFGAYGTITSAVLMRDADGRSKC-FGFVNFENAEDA 264
Query: 347 MKALKNTEKYEIDGK 361
KA++ ++D K
Sbjct: 265 AKAVEALNGKKVDDK 279
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 71/312 (22%), Positives = 136/312 (43%), Gaps = 44/312 (14%)
Query: 118 SEVYIGGIANNVSEEDLRVFCQSVGEVSEVRIMKAKESGEGKGYAFVAFKTKELASQAIE 177
+ ++I + + + L S G++ +I SG+ KGY FV F+ ++ A AI+
Sbjct: 120 ANIFIKNLDKTIDHKALHDTFSSFGQIMSCKI-ATDGSGQSKGYGFVQFEAEDSAQNAID 178
Query: 178 ELNNSEFKGKKI------------KCSSSQAKHRLFIGNIPKKWTVEDMKKVVADVGPGV 225
+LN K++ S + +++ N+ + +T +D+K G +
Sbjct: 179 KLNGMLINDKQVFVGHFLRKQDRDNVLSKTKFNNVYVKNLSESFTEDDLKNEFGAYG-TI 237
Query: 226 ISIELLKDLQSSGRNRGFAFIEYYNHACAEYSRQKMSNSNFKLENNAPTVSWADPRNS-- 283
S L++D + GR++ F F+ + N A + + ++ K+++ V A ++
Sbjct: 238 TSAVLMRD--ADGRSKCFGFVNFENAEDAAKAVEALNGK--KVDDKEWYVGKAQKKSERE 293
Query: 284 -----------ESSAVSQVKAV--YVKNLPENITQDSLKKLFEHHGKITKVVLPPAKAGQ 330
+ S V + + + Y+KNL ++IT + LK++F G IT + G
Sbjct: 294 QELKGRFEQTVKESVVDKFQGLNLYLKNLDDSITDEKLKEMFSEFGTITSYKIMRDPNGV 353
Query: 331 EKSRFGFVHFSDRSSAMKALKNTEKYEIDGKNLECSLAKPQADQRS--SGTSNSQKPVV- 387
+ GFV FS A +AL I K L ++A+ + D+R+ + +PV
Sbjct: 354 SRGS-GFVAFSTPEEASRALGEMNGKMIVSKPLYVAVAQRKEDRRARLQAQFSQMRPVAI 412
Query: 388 -------LPTYP 392
+P YP
Sbjct: 413 TPSVAPRMPLYP 424
>Medtr4g085540.1 | polyadenylate-binding protein | HC |
chr4:33416965-33423437 | 20130731
Length = 654
Score = 82.8 bits (203), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 65/256 (25%), Positives = 121/256 (47%), Gaps = 20/256 (7%)
Query: 118 SEVYIGGIANNVSEEDLRVFCQSVGEVSEVRIMKAKESGEGKGYAFVAFKTKELASQAIE 177
+ +Y+G + NV++ L +G+V VR+ + + GY +V + + A++A++
Sbjct: 34 TSLYVGDLDMNVTDSQLYDLFNQLGQVVSVRVCRDLTTRRSLGYGYVNYSNPQDAARALD 93
Query: 178 ELNNSEFKGKKIKCSSSQ--------AKHRLFIGNIPKKWTVEDMKKVVADVGPGVISIE 229
LN + + I+ S + +FI N+ K + + + G ++S +
Sbjct: 94 VLNFTPLNNRPIRIMYSHRDPSIRKSGQGNIFIKNLDKAIDHKALHDTFSSFG-NILSCK 152
Query: 230 LLKDLQSSGRNRGFAFIEYYNHACAEYSRQKMSNSNFKLENNAPTVSWADPRNSESSAV- 288
+ D SG+++G+ F+++ A+ + +K+ N L N+ R E +
Sbjct: 153 VAVD--GSGQSKGYGFVQFDTEEAAQKAIEKL---NGMLLNDKQVYVGPFLRKQERESTG 207
Query: 289 --SQVKAVYVKNLPENITQDSLKKLFEHHGKITKVVLPPAKAGQEKSR-FGFVHFSDRSS 345
++ V+VKNL E+ T D LKK F G IT V+ + G KS+ FGFV+F
Sbjct: 208 DRAKFNNVFVKNLSESTTDDELKKTFGEFGTITSAVV--MRDGDGKSKCFGFVNFESTDD 265
Query: 346 AMKALKNTEKYEIDGK 361
A +A++ +ID K
Sbjct: 266 AARAVEALNGKKIDDK 281
Score = 72.8 bits (177), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 73/300 (24%), Positives = 138/300 (46%), Gaps = 39/300 (13%)
Query: 120 VYIGGIANNVSEEDLRVFCQSVGEVSEVRIMKAKESGEGKGYAFVAFKTKELASQAIEEL 179
++I + + + L S G + ++ SG+ KGY FV F T+E A +AIE+L
Sbjct: 124 IFIKNLDKAIDHKALHDTFSSFGNILSCKV-AVDGSGQSKGYGFVQFDTEEAAQKAIEKL 182
Query: 180 NNSEFKGKKI-----------KCSSSQAK-HRLFIGNIPKKWTVEDMKKVVADVGPGVIS 227
N K++ + + +AK + +F+ N+ + T +++KK + G + S
Sbjct: 183 NGMLLNDKQVYVGPFLRKQERESTGDRAKFNNVFVKNLSESTTDDELKKTFGEFG-TITS 241
Query: 228 IELLKDLQSSGRNRGFAFIEYYNHACAEYSRQKMSNSNFKLENNAPTVSWADPRNS---- 283
+++D G+++ F F+ + + A + + ++ K+++ V A ++
Sbjct: 242 AVVMRD--GDGKSKCFGFVNFESTDDAARAVEALNGK--KIDDKEWYVGKAQKKSEREHE 297
Query: 284 ----------ESSAVSQVKAVYVKNLPENITQDSLKKLFEHHGKIT--KVVLPPAKAGQE 331
E++ Q +YVKNL ++I + LK+LF +G IT KV+ P +
Sbjct: 298 LKIKFEQSMKEAADKYQGANLYVKNLDDSIADEKLKELFSSYGTITSCKVMRDPNGVSRG 357
Query: 332 KSRFGFVHFSDRSSAMKALKNTEKYEIDGKNLECSLAKPQADQRSSGTSN--SQKPVVLP 389
GFV FS A +AL + K L +LA+ + D+R+ + +PV +P
Sbjct: 358 S---GFVAFSTPEEASRALLEMNGKMVASKPLYVTLAQRKEDRRARLQAQFAQMRPVSMP 414
>Medtr2g022950.1 | polyadenylate-binding protein RBP47B | HC |
chr2:7987418-7992129 | 20130731
Length = 401
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 61/286 (21%), Positives = 129/286 (45%), Gaps = 37/286 (12%)
Query: 120 VYIGGIANNVSEEDLRVFCQSVGEVSEVRIMKAKESGEGKGYAFVAFKTKELASQAIE-- 177
++IG + + E L + GE++ V++++ K++ + +GY F+ F T+ A + ++
Sbjct: 62 LWIGDLQYWMDENYLYTCFGNTGELTSVKVIRNKQTSQSEGYGFIEFNTRATAERVLQTY 121
Query: 178 ------------ELNNSEFK-GKKIKCSSSQAKHRLFIGNIPKKWTVEDMKKVVADVGPG 224
LN + F G++ H +F+G++ T +++
Sbjct: 122 NGTIMPNGGQNYRLNWATFSAGERSSRQDDGPDHTIFVGDLAADVTDYLLQETFRARYNS 181
Query: 225 VISIELLKDLQSSGRNRGFAFIEYYN-----HACAEYSRQKMSNSNFKL---------EN 270
V +++ D + +GR++G+ F+ + + A E S ++
Sbjct: 182 VKGAKVVID-RLTGRSKGYGFVRFADEGEQMRAMTEMQGVLCSTRPMRIGPATNKNPAAT 240
Query: 271 NAPTVSWADPRNSESSAVSQVKAVYVKNLPENITQDSLKKLFEHHGKITKVVLPPAKAGQ 330
P S+ +P +S ++V NL N+T D L+++F +G++ V +P K
Sbjct: 241 TQPKASY-NPSGGQSENDPNNTTIFVGNLDPNVTDDHLRQVFTQYGELVHVKIPSGK--- 296
Query: 331 EKSRFGFVHFSDRSSAMKALKNTEKYEIDGKNLECSLAKPQADQRS 376
R GFV FSDRS A +A++ + G+N+ S + +++++
Sbjct: 297 ---RCGFVQFSDRSCAEEAIRVLNGTLLGGQNVRLSWGRTPSNKQT 339
>Medtr6g040190.1 | polyadenylate-binding protein | LC |
chr6:14408733-14404765 | 20130731
Length = 623
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 74/271 (27%), Positives = 124/271 (45%), Gaps = 23/271 (8%)
Query: 118 SEVYIGGIANNVSEEDLRVFCQSVGEVSEVRIMKAKESGEGKGYAFVAFKTKELASQAIE 177
S +Y+G + NV++ L + V VR+ + + + GY +V + A+ A+E
Sbjct: 25 SSLYVGDLQGNVNDAQLYDLFSQIAPVISVRVCRDQMTQSSLGYGYVNYSNARDAANAME 84
Query: 178 ELNNSEFKGKKIKCSSSQAKHR-----------LFIGNIPKKWTVEDMKKVVADVGPGVI 226
LN GK I+ S HR LFI N+ + + + + G V+
Sbjct: 85 NLNYVPLNGKPIRIMFS---HRDPLIRKTGFANLFIKNLETSIDNKALHETFSVFG-NVL 140
Query: 227 SIELLKDLQSSGRNRGFAFIEYYNHACAEYSRQKMSNSNFKLENNAPTVSWADPRNSESS 286
S ++ D S+G ++G F+++ N A+ + +K+ L N+ R E S
Sbjct: 141 SCKVAMD--SNGHSKGHGFVQFDNDQSAKNAIEKLDG---MLMNDKKVYVGYFVRCQERS 195
Query: 287 AVSQVKAVYVKNLPENITQDSLKKLFEHHGKITKVVLPPAKAGQEKSRFGFVHFSDRSSA 346
+ + VYVKNL E+ T + LK+LF G IT V++ G K FGFV+F SA
Sbjct: 196 S-PKFTNVYVKNLSESYTYEDLKQLFNSFGVITSVLIMKYDNGNSKC-FGFVNFQSSDSA 253
Query: 347 MKALKNTEKYEI-DGKNLECSLAKPQADQRS 376
A++ DGK L A+ ++++ +
Sbjct: 254 ATAVEKLNGSTTNDGKVLFVGRAQKKSEREA 284
Score = 62.4 bits (150), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 65/277 (23%), Positives = 123/277 (44%), Gaps = 38/277 (13%)
Query: 125 IANNVSEEDLRVFCQSVGEVSEVRIMKAKESGEGKGYAFVAFKTKELASQAIEELNNSEF 184
I N E VF G V ++ +G KG+ FV F + A AIE+L+
Sbjct: 124 IDNKALHETFSVF----GNVLSCKV-AMDSNGHSKGHGFVQFDNDQSAKNAIEKLDGMLM 178
Query: 185 KGKKI------KCS--SSQAKHRLFIGNIPKKWTVEDMKKVVADVGPGVISIELLKDLQS 236
KK+ +C SS +++ N+ + +T ED+K++ G + S+ ++K
Sbjct: 179 NDKKVYVGYFVRCQERSSPKFTNVYVKNLSESYTYEDLKQLFNSFGV-ITSVLIMK--YD 235
Query: 237 SGRNRGFAFIEYYNHACAEYSRQKMSNSNFKLENNAPTVSWADPRNSESSAVSQVKA--- 293
+G ++ F F+ + + A + +K++ S N V + +S +++KA
Sbjct: 236 NGNSKCFGFVNFQSSDSAATAVEKLNGST----TNDGKVLFVGRAQKKSEREAELKAFFE 291
Query: 294 --------------VYVKNLPENITQDSLKKLFEHHGKITKVVLPPAKAGQEKSRFGFVH 339
+Y+KN+ +++ ++ LK+LF G IT + G+ K GFV
Sbjct: 292 QEKLKRYEKFQGANLYLKNIDKSLNEEKLKELFSEFGTITSCKVMSDARGRSKG-VGFVA 350
Query: 340 FSDRSSAMKALKNTEKYEIDGKNLECSLAKPQADQRS 376
F+ A KA+ I K + S+A+ + ++++
Sbjct: 351 FTTPEEASKAIDEMNGKIIGQKPVYVSVAQRKEERKA 387
Score = 56.2 bits (134), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 41/159 (25%), Positives = 79/159 (49%), Gaps = 29/159 (18%)
Query: 115 PHGSEVYIGGIANNVSEEDLRVFCQSVGEVSEVRIMKAKESGEGKGYAFVAFKTKELASQ 174
P + VY+ ++ + + EDL+ S G ++ V IMK ++G K + FV F++ + A+
Sbjct: 197 PKFTNVYVKNLSESYTYEDLKQLFNSFGVITSVLIMKY-DNGNSKCFGFVNFQSSDSAAT 255
Query: 175 AIEELNNSE-------FKGKKIKCSSSQAKHR------------------LFIGNIPKKW 209
A+E+LN S F G+ K S +A+ + L++ NI K
Sbjct: 256 AVEKLNGSTTNDGKVLFVGRAQKKSEREAELKAFFEQEKLKRYEKFQGANLYLKNIDKSL 315
Query: 210 TVEDMKKVVADVGPGVISIELLKDLQSSGRNRGFAFIEY 248
E +K++ ++ G + S +++ D + GR++G F+ +
Sbjct: 316 NEEKLKELFSEFGT-ITSCKVMSD--ARGRSKGVGFVAF 351
>Medtr1g097440.2 | polyadenylate-binding protein | HC |
chr1:43966152-43970565 | 20130731
Length = 646
Score = 75.9 bits (185), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 75/280 (26%), Positives = 127/280 (45%), Gaps = 21/280 (7%)
Query: 108 AELLALPPHGSEVYIGGIANNVSEEDLRVFCQSVGEVSEVRIMKAKESGEGKGYAFVAFK 167
A L P + +Y+G + +V+E L V +V +R+ + + GYA+V F
Sbjct: 20 AALTGGPFANASLYVGDLEGSVNEGQLFDLFSQVAQVVSIRVCRDQTRRSSLGYAYVNFT 79
Query: 168 TKELASQAIEELNNSEFKGKKIKCSSSQ--------AKHRLFIGNIPKKWTVEDMKKVVA 219
+ A+ A E LN + K I+ SQ +FI N+ + + A
Sbjct: 80 NAQDAANAKELLNFTPLNEKPIRIMFSQRDPSVRKSGSGNVFIKNLDTSIDHKALHDTFA 139
Query: 220 DVGPGVISIELLKDLQSSGRNRGFAFIEYYNHACAEYSRQKMSNSNFKLENNAPTVSWAD 279
GP V+S ++ D +G+++G+ F+++ N A+ + +++ L N+
Sbjct: 140 AFGP-VLSCKVALD--GNGQSKGYGFVQFDNEEAAKSAIKQLDG---MLINDKQVYVGFF 193
Query: 280 PRNSE---SSAVSQVKAVYVKNLPENITQDSLKKLFEHHGKITKVVLPPAKAGQEKSR-F 335
R+ E ++ + VYVKN+ E T + LK+LF G IT + K KSR F
Sbjct: 194 VRHQERARTNGSPKFTNVYVKNISEASTDEDLKQLFGPFGMITSATV--MKDANGKSRCF 251
Query: 336 GFVHFSDRSSAMKALKNTEKYEI-DGKNLECSLAKPQADQ 374
GFV+F SA A++ I D K L A+ +A++
Sbjct: 252 GFVNFQSPDSAAAAVEKLNGTAINDDKVLFVGRAQRKAER 291
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 63/286 (22%), Positives = 126/286 (44%), Gaps = 38/286 (13%)
Query: 120 VYIGGIANNVSEEDLRVFCQSVGEVSEVRIMKAKESGEGKGYAFVAFKTKELASQAIEEL 179
V+I + ++ + L + G V ++ +G+ KGY FV F +E A AI++L
Sbjct: 120 VFIKNLDTSIDHKALHDTFAAFGPVLSCKV-ALDGNGQSKGYGFVQFDNEEAAKSAIKQL 178
Query: 180 NNSEFKGKKI------------KCSSSQAKHRLFIGNIPKKWTVEDMKKVVADVGPGVIS 227
+ K++ + + S +++ NI + T ED+K++ G + S
Sbjct: 179 DGMLINDKQVYVGFFVRHQERARTNGSPKFTNVYVKNISEASTDEDLKQLFGPFGM-ITS 237
Query: 228 IELLKDLQSSGRNRGFAFIEYYNHACAEYSRQKMSNSNFKLENNAPTVSWADPRNSESSA 287
++KD ++G++R F F+ + + A + +K++ + N V + ++
Sbjct: 238 ATVMKD--ANGKSRCFGFVNFQSPDSAAAAVEKLNGTAI----NDDKVLFVGRAQRKAER 291
Query: 288 VSQVKA-----------------VYVKNLPENITQDSLKKLFEHHGKITKVVLPPAKAGQ 330
+++KA +Y+KNL ++ ++ LK LF G +T + G
Sbjct: 292 ENELKAKFEQERISRYEKLQGANLYLKNLDDDFNEEKLKDLFSEFGTVTSCRVMLDSHGH 351
Query: 331 EKSRFGFVHFSDRSSAMKALKNTEKYEIDGKNLECSLAKPQADQRS 376
K GFV FS A KAL + K L ++A+ + ++++
Sbjct: 352 SKGS-GFVAFSTPEEANKALNEMNGKLVGRKPLFVAVAQRKEERKA 396
>Medtr1g097440.1 | polyadenylate-binding protein | HC |
chr1:43966161-43970565 | 20130731
Length = 646
Score = 75.9 bits (185), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 75/280 (26%), Positives = 127/280 (45%), Gaps = 21/280 (7%)
Query: 108 AELLALPPHGSEVYIGGIANNVSEEDLRVFCQSVGEVSEVRIMKAKESGEGKGYAFVAFK 167
A L P + +Y+G + +V+E L V +V +R+ + + GYA+V F
Sbjct: 20 AALTGGPFANASLYVGDLEGSVNEGQLFDLFSQVAQVVSIRVCRDQTRRSSLGYAYVNFT 79
Query: 168 TKELASQAIEELNNSEFKGKKIKCSSSQ--------AKHRLFIGNIPKKWTVEDMKKVVA 219
+ A+ A E LN + K I+ SQ +FI N+ + + A
Sbjct: 80 NAQDAANAKELLNFTPLNEKPIRIMFSQRDPSVRKSGSGNVFIKNLDTSIDHKALHDTFA 139
Query: 220 DVGPGVISIELLKDLQSSGRNRGFAFIEYYNHACAEYSRQKMSNSNFKLENNAPTVSWAD 279
GP V+S ++ D +G+++G+ F+++ N A+ + +++ L N+
Sbjct: 140 AFGP-VLSCKVALD--GNGQSKGYGFVQFDNEEAAKSAIKQLDG---MLINDKQVYVGFF 193
Query: 280 PRNSE---SSAVSQVKAVYVKNLPENITQDSLKKLFEHHGKITKVVLPPAKAGQEKSR-F 335
R+ E ++ + VYVKN+ E T + LK+LF G IT + K KSR F
Sbjct: 194 VRHQERARTNGSPKFTNVYVKNISEASTDEDLKQLFGPFGMITSATV--MKDANGKSRCF 251
Query: 336 GFVHFSDRSSAMKALKNTEKYEI-DGKNLECSLAKPQADQ 374
GFV+F SA A++ I D K L A+ +A++
Sbjct: 252 GFVNFQSPDSAAAAVEKLNGTAINDDKVLFVGRAQRKAER 291
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 63/286 (22%), Positives = 126/286 (44%), Gaps = 38/286 (13%)
Query: 120 VYIGGIANNVSEEDLRVFCQSVGEVSEVRIMKAKESGEGKGYAFVAFKTKELASQAIEEL 179
V+I + ++ + L + G V ++ +G+ KGY FV F +E A AI++L
Sbjct: 120 VFIKNLDTSIDHKALHDTFAAFGPVLSCKV-ALDGNGQSKGYGFVQFDNEEAAKSAIKQL 178
Query: 180 NNSEFKGKKI------------KCSSSQAKHRLFIGNIPKKWTVEDMKKVVADVGPGVIS 227
+ K++ + + S +++ NI + T ED+K++ G + S
Sbjct: 179 DGMLINDKQVYVGFFVRHQERARTNGSPKFTNVYVKNISEASTDEDLKQLFGPFGM-ITS 237
Query: 228 IELLKDLQSSGRNRGFAFIEYYNHACAEYSRQKMSNSNFKLENNAPTVSWADPRNSESSA 287
++KD ++G++R F F+ + + A + +K++ + N V + ++
Sbjct: 238 ATVMKD--ANGKSRCFGFVNFQSPDSAAAAVEKLNGTAI----NDDKVLFVGRAQRKAER 291
Query: 288 VSQVKA-----------------VYVKNLPENITQDSLKKLFEHHGKITKVVLPPAKAGQ 330
+++KA +Y+KNL ++ ++ LK LF G +T + G
Sbjct: 292 ENELKAKFEQERISRYEKLQGANLYLKNLDDDFNEEKLKDLFSEFGTVTSCRVMLDSHGH 351
Query: 331 EKSRFGFVHFSDRSSAMKALKNTEKYEIDGKNLECSLAKPQADQRS 376
K GFV FS A KAL + K L ++A+ + ++++
Sbjct: 352 SKGS-GFVAFSTPEEANKALNEMNGKLVGRKPLFVAVAQRKEERKA 396
>Medtr1g020080.1 | polyadenylate-binding protein RBP47C | HC |
chr1:6171590-6176327 | 20130731
Length = 425
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 66/279 (23%), Positives = 127/279 (45%), Gaps = 40/279 (14%)
Query: 120 VYIGGIANNVSEEDLRVFCQSVGEVSEVRIMKAKESGEGKGYAFVAFKTKELASQAIE-- 177
++IG + + + E L S GE++ V++++ K SG +GY F F + A + ++
Sbjct: 99 LWIGDLHSWMDESYLHRCFASTGEITSVKVIRNKHSGISEGYGFAEFFSHATAEKVLQNY 158
Query: 178 ------------ELNNSEFKGKKIKCSSSQAKHRLFIGNIPKKWTVEDMKKVVADVGPGV 225
LN + F K S + +F+G++ T + + + P V
Sbjct: 159 AGILMPNADQAFRLNWATFSTGD-KGSDNVTDLSIFVGDLAADVTDSVLHETFSSSYPSV 217
Query: 226 ISIELLKDLQSSGRNRGFAFIEYYNHACAEYSRQKMSNSNFKLENNAPT-VSWADPR--- 281
+ +++ D ++GR++G+ F+ + + + E S Q M+ N ++ P + A PR
Sbjct: 218 KAAKVVYDA-NTGRSKGYGFVRFGDES--ERS-QAMTQMNGVYCSSRPMRIGAATPRKSS 273
Query: 282 -----------NSESSAVSQVKAVYVKNLPENITQDSLKKLFEHHGKITKVVLPPAKAGQ 330
+S+S A S ++V L N+T + LK+ F +G+I V +P K
Sbjct: 274 GHQPGGQSNGTSSQSEADSTNTTIFVGGLDSNVTDEDLKQTFSQYGEIASVKIPVGKG-- 331
Query: 331 EKSRFGFVHFSDRSSAMKALKNTEKYEIDGKNLECSLAK 369
GFV F++R++A +AL+ I + + S +
Sbjct: 332 ----CGFVQFANRNNAEEALQKLNGTMIGKQTVRLSWGR 366
Score = 50.1 bits (118), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 51/197 (25%), Positives = 90/197 (45%), Gaps = 24/197 (12%)
Query: 200 LFIGNIPKKWTVED-MKKVVADVGPGVISIELLKDLQSSGRNRGFAFIEYYNHACAE--- 255
L+IG++ W E + + A G + S++++++ + SG + G+ F E+++HA AE
Sbjct: 99 LWIGDL-HSWMDESYLHRCFASTGE-ITSVKVIRN-KHSGISEGYGFAEFFSHATAEKVL 155
Query: 256 --YSRQKMSNSNFKLENNAPTVSWADPRNSESSAVSQVKAVYVKNLPENITQDSLKKLFE 313
Y+ M N++ N T S D + + +S ++V +L ++T L + F
Sbjct: 156 QNYAGILMPNADQAFRLNWATFSTGDKGSDNVTDLS----IFVGDLAADVTDSVLHETFS 211
Query: 314 HHG---KITKVVLPPAKAGQEKSRFGFVHFSDRSSAMKALKNTEKYEIDGKNLECSLAKP 370
K KVV A G+ K +GFV F D S +A+ + + A P
Sbjct: 212 SSYPSVKAAKVVYD-ANTGRSKG-YGFVRFGDESERSQAMTQMNGVYCSSRPMRIGAATP 269
Query: 371 ------QADQRSSGTSN 381
Q +S+GTS+
Sbjct: 270 RKSSGHQPGGQSNGTSS 286
>Medtr7g102730.1 | polyadenylate-binding protein | HC |
chr7:41652502-41656607 | 20130731
Length = 629
Score = 74.3 bits (181), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 71/280 (25%), Positives = 122/280 (43%), Gaps = 31/280 (11%)
Query: 120 VYIGGIANNVSEEDLRVFCQSVGEVSEVRIMKAKESGEGKGYAFVAFKTKELASQAIEEL 179
V++ +A ++ L + G + +++ + E G+ KGY FV F+T+E A+ AIE L
Sbjct: 100 VFVKNLAESIDNSGLEDMFKKFGNILSSKVVMS-EDGKSKGYGFVQFETEESANAAIERL 158
Query: 180 NNSEFKGKKIKCSSSQAKHRLFIGNIPKKWTVEDMKKVVADVGPG-----------VISI 228
N K+I K ++T MK + D+ +IS+
Sbjct: 159 NGYLVGDKQIYVGKFVKKSDRISSGPDTRYTNLYMKNLDLDISETLLREKFSSFGKIISL 218
Query: 229 ELLKDLQSSGRNRGFAFIEYYNHACAEYSRQKMSNSNFKLENNAPTVSWADPRNSESSAV 288
+ KD S+G ++GF F+ + N A+ + + M+ +L + V+ A + +
Sbjct: 219 AVAKD--SNGMSKGFGFVNFDNPEDAKRAMETMNG--LQLGSKILYVARAQKKAEREQIL 274
Query: 289 SQV--------------KAVYVKNLPENITQDSLKKLFEHHGKITKVVLPPAKAGQEKSR 334
Q +YVKN+ +N++ + L+ F G IT + G K
Sbjct: 275 HQQFEEKRKEQVLKYKGSNIYVKNIDDNVSDEGLRDHFSVCGTITSAKIMRDDKGISKG- 333
Query: 335 FGFVHFSDRSSAMKALKNTEKYEIDGKNLECSLAKPQADQ 374
FGFV FS A KA+ + + GK L SLA+ + D+
Sbjct: 334 FGFVCFSTPEEANKAVNSFHGFMFHGKPLYVSLAQRKEDR 373
Score = 67.0 bits (162), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 64/278 (23%), Positives = 130/278 (46%), Gaps = 22/278 (7%)
Query: 111 LALPPHGS--EVYIGGIANNVSEEDLRVFCQSVGEVSEVRIMKAKESGEGKGYAFVAFKT 168
+A+PP + +Y+G + ++S+ L ++ VRI + SG+ Y +V F +
Sbjct: 1 MAVPPSATPASLYVGDLHPDLSDSQLHDAFSDFKTLASVRICRDSSSGKSLCYGYVNFLS 60
Query: 169 KELASQAIEELNNSEFKGKKIKCSSSQA---KHRLFIGNIPKK--------WTVEDMKKV 217
A +AIE N+S GK I+ S+ + IGN+ K +EDM K
Sbjct: 61 PHDAIRAIEVKNHSTLNGKAIRVMWSRRDPDARKSCIGNVFVKNLAESIDNSGLEDMFKK 120
Query: 218 VADVGPGVISIELLKDLQSSGRNRGFAFIEYYNHACAEYSRQKMSNSNFKLENNAPTVSW 277
+ ++S +++ + G+++G+ F+++ A + +++ N + +
Sbjct: 121 FGN----ILSSKVV--MSEDGKSKGYGFVQFETEESANAAIERL-NGYLVGDKQIYVGKF 173
Query: 278 ADPRNSESSAV-SQVKAVYVKNLPENITQDSLKKLFEHHGKITKVVLPPAKAGQEKSRFG 336
+ SS ++ +Y+KNL +I++ L++ F GKI + + G K FG
Sbjct: 174 VKKSDRISSGPDTRYTNLYMKNLDLDISETLLREKFSSFGKIISLAVAKDSNGMSKG-FG 232
Query: 337 FVHFSDRSSAMKALKNTEKYEIDGKNLECSLAKPQADQ 374
FV+F + A +A++ ++ K L + A+ +A++
Sbjct: 233 FVNFDNPEDAKRAMETMNGLQLGSKILYVARAQKKAER 270
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/97 (32%), Positives = 53/97 (54%), Gaps = 3/97 (3%)
Query: 101 EVEKKKHAELLALPPHGSEVYIGGIANNVSEEDLRVFCQSVGEVSEVRIMKAKESGEGKG 160
+ E+K+ ++L GS +Y+ I +NVS+E LR G ++ +IM+ + G KG
Sbjct: 277 QFEEKRKEQVLKY--KGSNIYVKNIDDNVSDEGLRDHFSVCGTITSAKIMR-DDKGISKG 333
Query: 161 YAFVAFKTKELASQAIEELNNSEFKGKKIKCSSSQAK 197
+ FV F T E A++A+ + F GK + S +Q K
Sbjct: 334 FGFVCFSTPEEANKAVNSFHGFMFHGKPLYVSLAQRK 370
>Medtr3g101370.1 | polyadenylate-binding protein RBP47C | HC |
chr3:46662442-46658399 | 20130731
Length = 420
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 58/284 (20%), Positives = 126/284 (44%), Gaps = 37/284 (13%)
Query: 120 VYIGGIANNVSEEDLRVFCQSVGEVSEVRIMKAKESGEGKGYAFVAFKTKELASQAIE-- 177
+++G + + + E L S GE+ +++++ K++ + +GY FV F + A + ++
Sbjct: 95 LWVGDLHHWMDENYLHRCFASTGEIFSIKVIRNKQTCQTEGYGFVEFTSHGTAEKVLQTY 154
Query: 178 ------------ELNNSEFKGKKIKCSSSQAKHRLFIGNIPKKWTVEDMKKVVADVGPGV 225
LN + F K S + +F+G++ T + + +D P V
Sbjct: 155 AGMLMPNTEQPFRLNWATFSTGDHKRSDNVPDLSIFVGDLAADVTDTMLLETFSDKYPSV 214
Query: 226 ISIELLKDLQSSGRNRGFAFIEYYNHACAEYSRQKMSNSNFKLENNAPTVSWADPRN--- 282
+ +++ D ++GR++G+ F+ + + E S+ + + A + A PR
Sbjct: 215 KAAKVVFDA-NTGRSKGYGFVRFGDD--GERSKALNEMNGVFCSSRAMRIGAATPRKSSG 271
Query: 283 -----------SESSAVSQVKAVYVKNLPENITQDSLKKLFEHHGKITKVVLPPAKAGQE 331
S+S S ++V L + T + L++ F +G+I V +P K
Sbjct: 272 YQQGGQSNGTPSQSDTDSTNTTIFVGGLDPSATAEDLRQPFSQYGEIVSVKIPVGKG--- 328
Query: 332 KSRFGFVHFSDRSSAMKALKNTEKYEIDGKNLECSLAKPQADQR 375
GFV F++R++A +AL+ + + + S + A+++
Sbjct: 329 ---CGFVQFANRNNAEEALQKLNGTTVGKQTVRLSWGRNPANKQ 369
>Medtr2g097960.1 | polyadenylate-binding protein RBP47B | HC |
chr2:41853094-41847353 | 20130731
Length = 428
Score = 65.9 bits (159), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 62/298 (20%), Positives = 125/298 (41%), Gaps = 53/298 (17%)
Query: 120 VYIGGIANNVSEEDLRVFCQSVGEVSEVRIMKAKESGEGKGYAFVAFKTKELASQAIEEL 179
++IG + V E L GEV ++I++ K +G+ +GY F+ F + A + ++
Sbjct: 17 LWIGDLQYWVDENYLTHCFSHTGEVISIKIIRNKITGQPEGYGFIEFVSHSAAERVLQTY 76
Query: 180 NNSEFKGKKIKCSSSQAK-------------HRLFIGNIPKKWTVEDMKKVVADVGPGVI 226
N ++ G + + A H +F+G++ T +++ V
Sbjct: 77 NGTQMPGTEQTFRLNWASFGIGERRPDAGPDHSIFVGDLAPDVTDYLLQETFRTHYGSVR 136
Query: 227 SIELLKDLQSSGRNRGFAFIEY-----YNHACAEYSRQKMSNSNFKLENNAPTVSWADPR 281
+++ D ++GR++G+ F+++ N A +E + S ++ P + +
Sbjct: 137 GAKVVTD-PNTGRSKGYGFVKFSDESERNRAMSEMNGVYCSTRPMRISAATPKKTTGYQQ 195
Query: 282 NSE--------------------SSAVSQV--------KAVYVKNLPENITQDSLKKLFE 313
N ++ V+ V +YV NL N++++ LK+ F
Sbjct: 196 NPYAAVVAAAPVPKAIYPVPAYTTAPVNTVPPEYDVNNTTIYVGNLDLNVSEEELKQNFL 255
Query: 314 HHGKITKVVLPPAKAGQEKSRFGFVHFSDRSSAMKALKNTEKYEIDGKNLECSLAKPQ 371
G+I V + P KA GFV F R+SA +A++ + + + + S +PQ
Sbjct: 256 QFGEIVSVKVHPGKA------CGFVQFGARASAEEAIQKMQGKILGQQVIRVSWGRPQ 307
>Medtr3g027140.1 | RNA-binding (RRM/RBD/RNP motif) family protein |
HC | chr3:8413608-8404220 | 20130731
Length = 235
Score = 64.3 bits (155), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 53/182 (29%), Positives = 88/182 (48%), Gaps = 9/182 (4%)
Query: 194 SQAKHRLFIGNIPKKWTVEDMKKVVADVGPGVISIELLKDLQSSGRNRGFAFI-----EY 248
S A +L++GNIP+ + ++++K+V + G V E++ D + S R+R FAF+ E
Sbjct: 56 SPALRKLYVGNIPRTVSNDELEKIVQEHG-AVEKAEVMYD-KYSKRSRRFAFVTMKTVED 113
Query: 249 YNHACAEYSRQKMSNSNFKLE-NNAPTVSWADP-RNSESSAVSQVKAVYVKNLPENITQD 306
N A + + ++ K+ P + P + ES+ V VYV NL +N+T D
Sbjct: 114 ANAAAEKLNGTEIGGREIKVNITEKPLTTEGLPVQAGESTFVDSPYKVYVGNLAKNVTSD 173
Query: 307 SLKKLFEHHGKITKVVLPPAKAGQEKSRFGFVHFSDRSSAMKALKNTEKYEIDGKNLECS 366
SLKK F G + A + S FGFV FS A+ + ++G+ + +
Sbjct: 174 SLKKFFSEKGNALSAKVSRAPGTSKSSGFGFVTFSSDEDVEAAISSFNNALLEGQKIRVN 233
Query: 367 LA 368
A
Sbjct: 234 KA 235
Score = 59.3 bits (142), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 40/153 (26%), Positives = 77/153 (50%), Gaps = 21/153 (13%)
Query: 115 PHGSEVYIGGIANNVSEEDLRVFCQSVGEVSEVRIMKAKESGEGKGYAFVAFKTKELASQ 174
P ++Y+G I VS ++L Q G V + +M K S + +AFV KT E A+
Sbjct: 57 PALRKLYVGNIPRTVSNDELEKIVQEHGAVEKAEVMYDKYSKRSRRFAFVTMKTVEDANA 116
Query: 175 AIEELNNSEFKGKKIKCSSSQ-------------------AKHRLFIGNIPKKWTVEDMK 215
A E+LN +E G++IK + ++ + +++++GN+ K T + +K
Sbjct: 117 AAEKLNGTEIGGREIKVNITEKPLTTEGLPVQAGESTFVDSPYKVYVGNLAKNVTSDSLK 176
Query: 216 KVVADVGPGVISIELLKDLQSSGRNRGFAFIEY 248
K ++ G +S ++ + +S ++ GF F+ +
Sbjct: 177 KFFSEKG-NALSAKVSRAPGTS-KSSGFGFVTF 207
Score = 49.3 bits (116), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 39/73 (53%)
Query: 119 EVYIGGIANNVSEEDLRVFCQSVGEVSEVRIMKAKESGEGKGYAFVAFKTKELASQAIEE 178
+VY+G +A NV+ + L+ F G ++ +A + + G+ FV F + E AI
Sbjct: 160 KVYVGNLAKNVTSDSLKKFFSEKGNALSAKVSRAPGTSKSSGFGFVTFSSDEDVEAAISS 219
Query: 179 LNNSEFKGKKIKC 191
NN+ +G+KI+
Sbjct: 220 FNNALLEGQKIRV 232
>Medtr3g065190.1 | RNA-binding (RRM/RBD/RNP motif) family protein |
HC | chr3:29411645-29406062 | 20130731
Length = 379
Score = 64.3 bits (155), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 49/168 (29%), Positives = 84/168 (50%), Gaps = 10/168 (5%)
Query: 118 SEVYIGGIANNVSEEDLRVFCQSVGEVSEVRIMKAKESGEGKGYAFVAFKTKELASQAIE 177
+ Y+G + +SEE L G V V + K + + + +GY FV F+++E A AI+
Sbjct: 25 ATAYVGNLDPQISEELLWELFVQAGPVVNVYVPKDRVTNQHQGYGFVEFRSEEDADYAIK 84
Query: 178 ELNNSEFKGKKIKCS-SSQAKH------RLFIGNIPKKWTVEDMKKVVADVGPGVISIEL 230
LN + GK I+ + +SQ K LFIGN+ + + + G V + ++
Sbjct: 85 VLNMIKLYGKPIRVNKASQDKKSLDVGANLFIGNLDPDVDEKLLYDTFSAFGVIVTNPKI 144
Query: 231 LKDLQSSGRNRGFAFIEYYNHACAEYSRQKMSNSNFKLENNAPTVSWA 278
++D +G +RGF FI Y + ++ + + M+ L N TVS+A
Sbjct: 145 MRD-PDTGNSRGFGFISYDSFEASDSAIEAMNGQ--YLCNRQITVSYA 189
>Medtr4g086600.1 | polyadenylate-binding protein RBP47B | HC |
chr4:33938062-33942519 | 20130731
Length = 454
Score = 63.2 bits (152), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 54/295 (18%), Positives = 123/295 (41%), Gaps = 52/295 (17%)
Query: 120 VYIGGIANNVSEEDLRVFCQSVGEVSEVRIMKAKESGEGKGYAFVAFKTKELASQAIEEL 179
+++G + + + E L GEV+ ++++ K++G+ +GY FV F T+ +A + ++
Sbjct: 118 IWLGDLHHWMDETFLHNCFAHTGEVASAKVIRNKQTGQSEGYGFVEFYTRAMAEKVLQNF 177
Query: 180 NNSEF------------------KGKKIKCSSSQAKHRLFIGNIPKKWTVEDMKKVVADV 221
N + G + + S + + +F+G++ T +++ A
Sbjct: 178 NGTMMPNTDQAFRLNWATFSAAGGGGERRSSEATSDLSVFVGDLAIDVTDAMLQETFASK 237
Query: 222 GPGVISIELLKDLQSSGRNRGFAFIEYYN-----HACAEYSRQKMSNSNFKLENNAPTVS 276
+ +++ D ++GR++G+ F+ + + A E + S+ ++ P +
Sbjct: 238 FSSIKGAKVVID-SNTGRSKGYGFVRFGDESERTRAMTEMNGVYCSSRPMRVGVATPKKT 296
Query: 277 WADPRNSESSAV----------------------SQVKAVYVKNLPENITQDSLKKLFEH 314
+ +P+ S AV S ++V L +I+ + L++ F
Sbjct: 297 YGNPQQYSSQAVVLAGGGGHSNGAMAQGSQSEGDSNNTTIFVGGLDSDISDEDLRQPFLQ 356
Query: 315 HGKITKVVLPPAKAGQEKSRFGFVHFSDRSSAMKALKNTEKYEIDGKNLECSLAK 369
G + V +P K GFV +DR +A +A++ I + + S +
Sbjct: 357 FGDVISVKIPVGKG------CGFVQLADRKNAEEAIQGLNGTVIGKQTVRLSWGR 405
>Medtr4g122650.1 | flowering time control FCA-like protein | HC |
chr4:50587410-50576809 | 20130731
Length = 737
Score = 62.8 bits (151), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 36/144 (25%), Positives = 81/144 (56%), Gaps = 18/144 (12%)
Query: 118 SEVYIGGIANNVSEEDLRVFCQSVGEVSEVRIMKAKESGEGKGYAFVAFKTKELASQAIE 177
+++++G + +EED+R + G V EV ++K +++G+ +G F+ + T E A QAI
Sbjct: 88 AKLFVGSVPRTATEEDIRPLFEEHGNVVEVALIKDRKTGQHQGCCFIKYATSEEADQAIR 147
Query: 178 ELNNSEF-------------KGKKIKCSSSQAKHRLFIGNIPKKWTVEDMKKVVADVGPG 224
L+N G++ + + +++LF+G++ K+ +V+++++V + G
Sbjct: 148 ALHNRHTLPGGVGPIQVRYADGERERLGA--VEYKLFVGSLNKQASVKEVEEVFSKYG-R 204
Query: 225 VISIELLKDLQSSGRNRGFAFIEY 248
+ + L++D Q ++RG F++Y
Sbjct: 205 IEDVYLMRDDQK--QSRGCGFVKY 226
>Medtr1g045510.1 | RNA-binding (RRM/RBD/RNP motif) family protein |
HC | chr1:17072567-17075712 | 20130731
Length = 285
Score = 62.8 bits (151), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 47/176 (26%), Positives = 88/176 (50%), Gaps = 9/176 (5%)
Query: 197 KHRLFIGNIPKKWTVEDMKKVVADVGPGVISIELLKDLQSSGRNRGFAFIEYYNHACAEY 256
+ +L+ GN+P + ++ + G + IE+L D + +G++RGFAF+ +C E
Sbjct: 112 RTKLYFGNLPYSVDSALLAGLIEEYGSAEL-IEVLYD-RDTGKSRGFAFV---TMSCVED 166
Query: 257 SRQKMSNSNFK-LENNAPTVSWAD-PRNSESSAVSQVKAVYVKNLPENITQDSLKKLFEH 314
+ N + K V+++D P+ E ++V NL +T +SL + F+
Sbjct: 167 CNAVIQNLDGKEFMGRTLRVNFSDKPKPKEPLYPETEYKLFVGNLAWTVTSESLTQAFQE 226
Query: 315 HGKITKV-VLPPAKAGQEKSRFGFVHFSDRSSAMKALKNTEKYEIDGKNLECSLAK 369
HG + VL + G+ + +GFV ++ +S AL + E++G+ L SLA+
Sbjct: 227 HGTVVGARVLFDGETGKSRG-YGFVSYATKSEMDTALAIMDNVELEGRTLRVSLAQ 281
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 40/177 (22%), Positives = 84/177 (47%), Gaps = 15/177 (8%)
Query: 118 SEVYIGGIANNVSEEDLRVFCQSVGEVSEVRIMKAKESGEGKGYAFVAFKTKELASQAIE 177
+++Y G + +V L + G + ++ +++G+ +G+AFV E + I+
Sbjct: 113 TKLYFGNLPYSVDSALLAGLIEEYGSAELIEVLYDRDTGKSRGFAFVTMSCVEDCNAVIQ 172
Query: 178 ELNNSEFKGKKIKCSSS-----------QAKHRLFIGNIPKKWTVEDMKKVVADVGPGVI 226
L+ EF G+ ++ + S + +++LF+GN+ T E + + + G V+
Sbjct: 173 NLDGKEFMGRTLRVNFSDKPKPKEPLYPETEYKLFVGNLAWTVTSESLTQAFQEHGT-VV 231
Query: 227 SIELLKDLQSSGRNRGFAFIEYYNHACAEYSRQKMSNSNFKLENNAPTVSWADPRNS 283
+L D + +G++RG+ F+ Y + + + M N +LE VS A + S
Sbjct: 232 GARVLFDGE-TGKSRGYGFVSYATKSEMDTALAIM--DNVELEGRTLRVSLAQGKRS 285
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 25/85 (29%), Positives = 46/85 (54%)
Query: 114 PPHGSEVYIGGIANNVSEEDLRVFCQSVGEVSEVRIMKAKESGEGKGYAFVAFKTKELAS 173
P ++++G +A V+ E L Q G V R++ E+G+ +GY FV++ TK
Sbjct: 200 PETEYKLFVGNLAWTVTSESLTQAFQEHGTVVGARVLFDGETGKSRGYGFVSYATKSEMD 259
Query: 174 QAIEELNNSEFKGKKIKCSSSQAKH 198
A+ ++N E +G+ ++ S +Q K
Sbjct: 260 TALAIMDNVELEGRTLRVSLAQGKR 284
>Medtr1g061870.1 | polyadenylate-binding plant protein, putative |
HC | chr1:27029234-27025443 | 20130731
Length = 522
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 62/277 (22%), Positives = 123/277 (44%), Gaps = 27/277 (9%)
Query: 120 VYIGGIANNVSEEDLRVFCQSVGEVSEVRIMKAKESGEGKGYAFVAFKTKELASQAIEEL 179
V++ +A ++ L Q G + +I ++ E G+ KG+ ++ F ++E A+ AI+++
Sbjct: 105 VFVKNLAASIDNVGLHDLFQKYGNILSSKIARS-EDGKSKGFGYIQFDSEESANVAIQKM 163
Query: 180 NNSEFKGKKIKCSSSQAKHRLFIGNIPKKWT---VEDMKKVVADVGPG--------VISI 228
N S + K+I K + ++ K+T V+++ VV + G ++S+
Sbjct: 164 NGSTVRDKQIYVGKFIRKSERSLPDLDAKFTNLYVKNLDPVVTEKHLGEKFSSFGKIVSL 223
Query: 229 ELLKDLQSSGRNRGFAFIEYYNHACAEYSRQKMSNSNFKLENNAPTVSWADPRNSESSAV 288
+ KD +G+++GF F+ Y + A + + M S F + V+ A + +
Sbjct: 224 AIKKD--ENGQSKGFGFVNYDSPDDARRAMEAMDGSQFG--SKILYVARAQKKVEREQIL 279
Query: 289 SQV----------KAVYVKNLPENITQDSLKKLFEHHGKITKVVLPPAKAGQEKSRFGFV 338
+ +YVKN+ ++ + L+ F G++ + G K FGFV
Sbjct: 280 HHLFVEKGLKHMGSNIYVKNIDTSVGDEELRDHFSACGEVLSAKVMRDDKGTSKG-FGFV 338
Query: 339 HFSDRSSAMKALKNTEKYEIDGKNLECSLAKPQADQR 375
FS A K++ GK L A+ + D++
Sbjct: 339 CFSTVVEAFKSMSCFNGCMFHGKPLYVDFAQKKEDRK 375
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 59/268 (22%), Positives = 120/268 (44%), Gaps = 18/268 (6%)
Query: 118 SEVYIGGIANNVSEEDLRVFCQSVGEVSEVRIMKAKESGEGKGYAFVAFKTKELASQAIE 177
+ +Y+G + ++V++ L + R+ K +G+ Y +V + + A +AIE
Sbjct: 15 ATLYVGDLHSDVTDAQLYKAFSEFNTLISARVCKDSATGKSLCYGYVNLSSHQEAIRAIE 74
Query: 178 ELNNSEFKGKKIKC--------SSSQAKHRLFIGNIPKKWTVEDMKKVVADVGPGVISIE 229
N+S GK I+ + K +F+ N+ + + G ++S +
Sbjct: 75 LKNHSSLNGKVIRVMWLSRDADARKSGKGNVFVKNLAASIDNVGLHDLFQKYG-NILSSK 133
Query: 230 LLKDLQSSGRNRGFAFIEYYNHACAEYSRQKMSNSNFKLENNAPTVSWADPRNSESSAV- 288
+ + G+++GF +I++ + A + QKM+ S + + R SE S
Sbjct: 134 IAR--SEDGKSKGFGYIQFDSEESANVAIQKMNGSTVR---DKQIYVGKFIRKSERSLPD 188
Query: 289 --SQVKAVYVKNLPENITQDSLKKLFEHHGKITKVVLPPAKAGQEKSRFGFVHFSDRSSA 346
++ +YVKNL +T+ L + F GKI + + + GQ K FGFV++ A
Sbjct: 189 LDAKFTNLYVKNLDPVVTEKHLGEKFSSFGKIVSLAIKKDENGQSKG-FGFVNYDSPDDA 247
Query: 347 MKALKNTEKYEIDGKNLECSLAKPQADQ 374
+A++ + + K L + A+ + ++
Sbjct: 248 RRAMEAMDGSQFGSKILYVARAQKKVER 275
>Medtr3g082650.1 | RNA recognition motif, a.k.a. RRM, RBD protein |
HC | chr3:37290152-37292326 | 20130731
Length = 352
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 41/173 (23%), Positives = 79/173 (45%), Gaps = 6/173 (3%)
Query: 199 RLFIGNIPKKWTVEDMKKVVADVGPGVISIELLKDLQSSGRNRGFAFIEYYNHACAEYSR 258
++FIG + K T+E+ K G S+ ++KD + +GR RGF FI Y + + +
Sbjct: 19 KIFIGGLAKDTTLEEFVKYFERYGEITDSV-IMKD-RHTGRPRGFGFITYADASVVDQVI 76
Query: 259 QKMSNSNFKLENNAPTVSWADPRNSESSAVSQVKAVYVKNLPENITQDSLKKLFEHHGKI 318
Q+ N + + + P+ + + + K ++V +P +++D LK F HG +
Sbjct: 77 QE----NHIINDKQVEIKRTIPKGASQTNDFKTKKIFVGGIPATVSEDELKIFFSKHGNV 132
Query: 319 TKVVLPPAKAGQEKSRFGFVHFSDRSSAMKALKNTEKYEIDGKNLECSLAKPQ 371
+ + + FGFV F + L + ++D +E A+P+
Sbjct: 133 VEHEIIRDHTTKRSRGFGFVVFDSDKAVDNLLADGNMIDMDDTQVEIKKAEPK 185
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 35/139 (25%), Positives = 78/139 (56%), Gaps = 10/139 (7%)
Query: 118 SEVYIGGIANNVSEEDLRVFCQSVGEVSEVRIMKAKESGEGKGYAFVAFKTKELASQAIE 177
+++IGG+A + + E+ + + GE+++ IMK + +G +G+ F+ + + Q I+
Sbjct: 18 GKIFIGGLAKDTTLEEFVKYFERYGEITDSVIMKDRHTGRPRGFGFITYADASVVDQVIQ 77
Query: 178 E---LNNSEFKGKK-IKCSSSQAKH----RLFIGNIPKKWTVEDMKKVVADVGPGVISIE 229
E +N+ + + K+ I +SQ ++F+G IP + +++K + G V+ E
Sbjct: 78 ENHIINDKQVEIKRTIPKGASQTNDFKTKKIFVGGIPATVSEDELKIFFSKHG-NVVEHE 136
Query: 230 LLKDLQSSGRNRGFAFIEY 248
+++D ++ R+RGF F+ +
Sbjct: 137 IIRD-HTTKRSRGFGFVVF 154
>Medtr1g115375.1 | RNA recognition motif, a.k.a. RRM, RBD protein |
HC | chr1:52075123-52071412 | 20130731
Length = 490
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 36/144 (25%), Positives = 81/144 (56%), Gaps = 17/144 (11%)
Query: 118 SEVYIGGIANNVSEEDLRVFCQSVGEVSEVRIMKAKESGEGKGYAFVAFKTKELASQAIE 177
++VY+GGI SE+D+ + + G ++E+ M ++G+ +G A ++FKT+ A +A+
Sbjct: 220 TKVYVGGIPYYSSEDDIHSYFEGCGTITEINCMTFPDTGKFRGIAIISFKTEAAAKRAL- 278
Query: 178 ELNNSEFKGKKIK---CSSSQAK----------HRLFIGNIPKKWTVEDMKKVVADVGPG 224
L+ ++ G +K C ++QA +R+++G++ + T E+++K ++
Sbjct: 279 ALDGADMGGLFLKIQPCKATQATRFTPEMKEGYNRIYVGSLSWEITEEELRKFFSNCNVK 338
Query: 225 VISIELLKDLQSSGRNRGFAFIEY 248
I + + K+ +G RG+A +++
Sbjct: 339 AIRLGMDKE---TGEFRGYAHVDF 359
>Medtr3g055990.2 | heterogeneous nuclear ribonucleoprotein 27C,
putative | HC | chr3:22254761-22251454 | 20130731
Length = 478
Score = 60.1 bits (144), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 51/185 (27%), Positives = 85/185 (45%), Gaps = 19/185 (10%)
Query: 199 RLFIGNIPKKWTVEDMKKVVADVGPGVISIELLKDLQSSGRNRGFAFIEYYNHACAEYSR 258
+LFIG I E +K+ A G VI +++D +++GR RGF F+ + + A AE
Sbjct: 7 KLFIGGISWDTDEERLKEYFATYGE-VIEAVIMRD-RATGRARGFGFVVFSDPAVAE--- 61
Query: 259 QKMSNSNFKLENNAPTVSWADPR------NSESSAV------SQVKAVYVKNLPENITQD 306
++ ++ A PR N ++ +V + K ++V LP IT+
Sbjct: 62 -RVIIDKHIIDGRTVEAKKAVPRDDQQNINRQTGSVQGSPGPGRTKKIFVGGLPSTITES 120
Query: 307 SLKKLFEHHGKITKVVLPPAKAGQEKSRFGFVHFSDRSSAMKALKNTEKYEIDGKNLECS 366
K F+ G IT VV+ Q FGF+ + + + L T +E++GK +E
Sbjct: 121 DFKMYFDQFGTITDVVVMYDHNTQRPRGFGFITYDSEEAVDRVLYKT-FHELNGKMVEVK 179
Query: 367 LAKPQ 371
A P+
Sbjct: 180 RAVPK 184
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 39/151 (25%), Positives = 68/151 (45%), Gaps = 22/151 (14%)
Query: 118 SEVYIGGIANNVSEEDLRVFCQSVGEVSEVRIMKAKESGEGKGYAFVAFKTKELASQAIE 177
+++IGGI+ + EE L+ + + GEV E IM+ + +G +G+ FV F +A + I
Sbjct: 6 GKLFIGGISWDTDEERLKEYFATYGEVIEAVIMRDRATGRARGFGFVVFSDPAVAERVII 65
Query: 178 E---LNNSEFKGKKI-----------KCSSSQAK------HRLFIGNIPKKWTVEDMKKV 217
+ ++ + KK + S Q ++F+G +P T D K
Sbjct: 66 DKHIIDGRTVEAKKAVPRDDQQNINRQTGSVQGSPGPGRTKKIFVGGLPSTITESDFKMY 125
Query: 218 VADVGPGVISIELLKDLQSSGRNRGFAFIEY 248
G + + ++ D + R RGF FI Y
Sbjct: 126 FDQFGT-ITDVVVMYDHNTQ-RPRGFGFITY 154
>Medtr3g055990.1 | heterogeneous nuclear ribonucleoprotein 27C,
putative | HC | chr3:22254761-22250364 | 20130731
Length = 481
Score = 59.7 bits (143), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 51/185 (27%), Positives = 85/185 (45%), Gaps = 19/185 (10%)
Query: 199 RLFIGNIPKKWTVEDMKKVVADVGPGVISIELLKDLQSSGRNRGFAFIEYYNHACAEYSR 258
+LFIG I E +K+ A G VI +++D +++GR RGF F+ + + A AE
Sbjct: 7 KLFIGGISWDTDEERLKEYFATYGE-VIEAVIMRD-RATGRARGFGFVVFSDPAVAE--- 61
Query: 259 QKMSNSNFKLENNAPTVSWADPR------NSESSAV------SQVKAVYVKNLPENITQD 306
++ ++ A PR N ++ +V + K ++V LP IT+
Sbjct: 62 -RVIIDKHIIDGRTVEAKKAVPRDDQQNINRQTGSVQGSPGPGRTKKIFVGGLPSTITES 120
Query: 307 SLKKLFEHHGKITKVVLPPAKAGQEKSRFGFVHFSDRSSAMKALKNTEKYEIDGKNLECS 366
K F+ G IT VV+ Q FGF+ + + + L T +E++GK +E
Sbjct: 121 DFKMYFDQFGTITDVVVMYDHNTQRPRGFGFITYDSEEAVDRVLYKT-FHELNGKMVEVK 179
Query: 367 LAKPQ 371
A P+
Sbjct: 180 RAVPK 184
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 39/151 (25%), Positives = 68/151 (45%), Gaps = 22/151 (14%)
Query: 118 SEVYIGGIANNVSEEDLRVFCQSVGEVSEVRIMKAKESGEGKGYAFVAFKTKELASQAIE 177
+++IGGI+ + EE L+ + + GEV E IM+ + +G +G+ FV F +A + I
Sbjct: 6 GKLFIGGISWDTDEERLKEYFATYGEVIEAVIMRDRATGRARGFGFVVFSDPAVAERVII 65
Query: 178 E---LNNSEFKGKKI-----------KCSSSQAK------HRLFIGNIPKKWTVEDMKKV 217
+ ++ + KK + S Q ++F+G +P T D K
Sbjct: 66 DKHIIDGRTVEAKKAVPRDDQQNINRQTGSVQGSPGPGRTKKIFVGGLPSTITESDFKMY 125
Query: 218 VADVGPGVISIELLKDLQSSGRNRGFAFIEY 248
G + + ++ D + R RGF FI Y
Sbjct: 126 FDQFGT-ITDVVVMYDHNTQ-RPRGFGFITY 154
>Medtr6g004810.1 | RNA-binding (RRM/RBD/RNP motif) family protein |
HC | chr6:438661-434987 | 20130731
Length = 383
Score = 59.7 bits (143), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 40/173 (23%), Positives = 77/173 (44%), Gaps = 6/173 (3%)
Query: 199 RLFIGNIPKKWTVEDMKKVVADVGPGVISIELLKDLQSSGRNRGFAFIEYYNHACAEYSR 258
++FIG + ++ T+ K G S+ ++KD + +G+ RGF FI Y + + +
Sbjct: 46 KIFIGGLARETTIAQFIKHFGKYGEITDSV-IMKD-RKTGQPRGFGFITYADPSVVD--- 100
Query: 259 QKMSNSNFKLENNAPTVSWADPRNSESSAVSQVKAVYVKNLPENITQDSLKKLFEHHGKI 318
K+ + + + + PR + S + K ++V +P N+T+D + F +G++
Sbjct: 101 -KVIEDSHIINSKQVEIKRTIPRGAVGSKDFRTKKIFVGGIPSNVTEDEFRDFFTRYGEV 159
Query: 319 TKVVLPPAKAGQEKSRFGFVHFSDRSSAMKALKNTEKYEIDGKNLECSLAKPQ 371
+ + FGFV F + L K E G +E A+P+
Sbjct: 160 KDHQIMRDHSTNRSRGFGFVTFDTEEAVDDLLSMGNKIEFAGTQVEIKKAEPK 212
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 45/79 (56%)
Query: 119 EVYIGGIANNVSEEDLRVFCQSVGEVSEVRIMKAKESGEGKGYAFVAFKTKELASQAIEE 178
++++GGI +NV+E++ R F GEV + +IM+ + +G+ FV F T+E +
Sbjct: 134 KIFVGGIPSNVTEDEFRDFFTRYGEVKDHQIMRDHSTNRSRGFGFVTFDTEEAVDDLLSM 193
Query: 179 LNNSEFKGKKIKCSSSQAK 197
N EF G +++ ++ K
Sbjct: 194 GNKIEFAGTQVEIKKAEPK 212
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 38/171 (22%), Positives = 80/171 (46%), Gaps = 13/171 (7%)
Query: 89 GEEEMRVDHTNDEVEKKKHAELLALPPHGS---EVYIGGIANNVSEEDLRVFCQSVGEVS 145
G E+ V + +++H +L G+ +++IGG+A + GE++
Sbjct: 13 GGEQNDVGRNYEHEHEQQHHNSQSLTGDGASPGKIFIGGLARETTIAQFIKHFGKYGEIT 72
Query: 146 EVRIMKAKESGEGKGYAFVAFKTKELASQAIEELNNSEFKGKKIK--------CSSSQAK 197
+ IMK +++G+ +G+ F+ + + + IE+ + K +IK S
Sbjct: 73 DSVIMKDRKTGQPRGFGFITYADPSVVDKVIEDSHIINSKQVEIKRTIPRGAVGSKDFRT 132
Query: 198 HRLFIGNIPKKWTVEDMKKVVADVGPGVISIELLKDLQSSGRNRGFAFIEY 248
++F+G IP T ++ + G V ++++D S+ R+RGF F+ +
Sbjct: 133 KKIFVGGIPSNVTEDEFRDFFTRYGE-VKDHQIMRD-HSTNRSRGFGFVTF 181
>Medtr6g040070.1 | DEAD/DEAH-box helicase | HC |
chr6:14397151-14388452 | 20130731
Length = 784
Score = 59.7 bits (143), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 46/145 (31%), Positives = 73/145 (50%), Gaps = 5/145 (3%)
Query: 234 LQSSGRNRGFAFIEYYNHACAEYSRQKMSNSNFKLENNAPTVSWADPRNSESSAVS-QVK 292
L S+G++ G+ F++Y NH A+ + +K+ +++ V + R S S +
Sbjct: 48 LDSNGKSLGYGFVQYDNHESAKCAIEKLDG--MLIKDKKAFVGYFIRRQERSENGSPKFT 105
Query: 293 AVYVKNLPENITQDSLKKLFEHHGKITKVVLPPAKAGQEKSRFGFVHFSDRSSAMKALKN 352
VYVKNL E T + LKKLF +G IT V+ + G K FGFV+F SA A++
Sbjct: 106 NVYVKNLLETDTDEDLKKLFSTYGVITSAVIMKDENGNSKC-FGFVNFQSPDSAAAAVEK 164
Query: 353 TEKYEI-DGKNLECSLAKPQADQRS 376
DGK L A+ + ++ +
Sbjct: 165 LNGTTTNDGKVLYVGRAQRKCEREA 189
Score = 59.3 bits (142), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 66/283 (23%), Positives = 121/283 (42%), Gaps = 29/283 (10%)
Query: 118 SEVYIGGIANNVSEEDLRVFCQSVGEVSEVRIMKAKESGEGKGYAFVAFKTKELASQAIE 177
+ V++ + ++ + L + G V ++ +G+ GY FV + E A AIE
Sbjct: 15 ANVFVKNLDTSIDNKVLHDTFATFGTVLSCKV-ALDSNGKSLGYGFVQYDNHESAKCAIE 73
Query: 178 ELNNSEFKGKKIKC-----------SSSQAKHRLFIGNIPKKWTVEDMKKVVADVGPGVI 226
+L+ K KK + S +++ N+ + T ED+KK+ + G +
Sbjct: 74 KLDGMLIKDKKAFVGYFIRRQERSENGSPKFTNVYVKNLLETDTDEDLKKLFSTYGV-IT 132
Query: 227 SIELLKDLQSSGRNRGFAFIEYYNHACAEYSRQKMSNSNF-------------KLENNAP 273
S ++KD +G ++ F F+ + + A + +K++ + K E A
Sbjct: 133 SAVIMKD--ENGNSKCFGFVNFQSPDSAAAAVEKLNGTTTNDGKVLYVGRAQRKCEREAE 190
Query: 274 TVSWADPRNSESSAVSQVKAVYVKNLPENITQDSLKKLFEHHGKITKVVLPPAKAGQEKS 333
+ + + Q +Y+KNL E+I + LK++F G IT + G K
Sbjct: 191 LRAKFEQEKIKRYEKLQGANLYLKNLDESINDEKLKEMFSEFGTITSCKVMFDAHGHSKG 250
Query: 334 RFGFVHFSDRSSAMKALKNTEKYEIDGKNLECSLAKPQADQRS 376
FGFV FS A KA+ I K L +A+ + D+++
Sbjct: 251 -FGFVAFSTSEEASKAINGMSGKIIGQKPLYVVVAQRKEDRKT 292
>Medtr5g097580.2 | RNA-binding (RRM/RBD/RNP motif) family protein |
HC | chr5:42749843-42753184 | 20130731
Length = 493
Score = 59.3 bits (142), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 40/150 (26%), Positives = 71/150 (47%), Gaps = 22/150 (14%)
Query: 119 EVYIGGIANNVSEEDLRVFCQSVGEVSEVRIMKAKESGEGKGYAFVAFKTKELASQAIEE 178
+++IGGI+ + +EE LR + + GEV E IMK + +G +G+ FV F +A ++E
Sbjct: 7 KLFIGGISWDTNEERLREYFSTYGEVKEAVIMKDRTTGRARGFGFVVFIDPAVADIVVQE 66
Query: 179 LNNSEFK-----------GKKIKCSSSQAKH---------RLFIGNIPKKWTVEDMKKVV 218
+N + + + + +S + H ++F+G + T D KK
Sbjct: 67 KHNIDGRMVEAKKAVPRDDQNVLSRTSGSIHGSPGPGRTRKIFVGGLASTVTESDFKKYF 126
Query: 219 ADVGPGVISIELLKDLQSSGRNRGFAFIEY 248
G + + ++ D + R RGF FI Y
Sbjct: 127 DQFGT-ITDVVVMYDHNTQ-RPRGFGFITY 154
Score = 55.8 bits (133), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 47/185 (25%), Positives = 84/185 (45%), Gaps = 19/185 (10%)
Query: 199 RLFIGNIPKKWTVEDMKKVVADVGPGVISIELLKDLQSSGRNRGFAFIEYYNHACAEYSR 258
+LFIG I E +++ + G V ++KD +++GR RGF F+ + + A A+
Sbjct: 7 KLFIGGISWDTNEERLREYFSTYGE-VKEAVIMKD-RTTGRARGFGFVVFIDPAVADIVV 64
Query: 259 QKMSNSNFKLENNAPTVSWADPRNSE------------SSAVSQVKAVYVKNLPENITQD 306
Q+ N + ++ V PR+ + S + + ++V L +T+
Sbjct: 65 QEKHNIDGRMVEAKKAV----PRDDQNVLSRTSGSIHGSPGPGRTRKIFVGGLASTVTES 120
Query: 307 SLKKLFEHHGKITKVVLPPAKAGQEKSRFGFVHFSDRSSAMKALKNTEKYEIDGKNLECS 366
KK F+ G IT VV+ Q FGF+ + + + L T +E++GK +E
Sbjct: 121 DFKKYFDQFGTITDVVVMYDHNTQRPRGFGFITYDSEEAVDQVLLKT-FHELNGKMVEVK 179
Query: 367 LAKPQ 371
A P+
Sbjct: 180 RAVPK 184
>Medtr5g097580.1 | RNA-binding (RRM/RBD/RNP motif) family protein |
HC | chr5:42749843-42754792 | 20130731
Length = 479
Score = 59.3 bits (142), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 40/150 (26%), Positives = 71/150 (47%), Gaps = 22/150 (14%)
Query: 119 EVYIGGIANNVSEEDLRVFCQSVGEVSEVRIMKAKESGEGKGYAFVAFKTKELASQAIEE 178
+++IGGI+ + +EE LR + + GEV E IMK + +G +G+ FV F +A ++E
Sbjct: 7 KLFIGGISWDTNEERLREYFSTYGEVKEAVIMKDRTTGRARGFGFVVFIDPAVADIVVQE 66
Query: 179 LNNSEFK-----------GKKIKCSSSQAKH---------RLFIGNIPKKWTVEDMKKVV 218
+N + + + + +S + H ++F+G + T D KK
Sbjct: 67 KHNIDGRMVEAKKAVPRDDQNVLSRTSGSIHGSPGPGRTRKIFVGGLASTVTESDFKKYF 126
Query: 219 ADVGPGVISIELLKDLQSSGRNRGFAFIEY 248
G + + ++ D + R RGF FI Y
Sbjct: 127 DQFGT-ITDVVVMYDHNTQ-RPRGFGFITY 154
Score = 55.8 bits (133), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 47/185 (25%), Positives = 84/185 (45%), Gaps = 19/185 (10%)
Query: 199 RLFIGNIPKKWTVEDMKKVVADVGPGVISIELLKDLQSSGRNRGFAFIEYYNHACAEYSR 258
+LFIG I E +++ + G V ++KD +++GR RGF F+ + + A A+
Sbjct: 7 KLFIGGISWDTNEERLREYFSTYGE-VKEAVIMKD-RTTGRARGFGFVVFIDPAVADIVV 64
Query: 259 QKMSNSNFKLENNAPTVSWADPRNSE------------SSAVSQVKAVYVKNLPENITQD 306
Q+ N + ++ V PR+ + S + + ++V L +T+
Sbjct: 65 QEKHNIDGRMVEAKKAV----PRDDQNVLSRTSGSIHGSPGPGRTRKIFVGGLASTVTES 120
Query: 307 SLKKLFEHHGKITKVVLPPAKAGQEKSRFGFVHFSDRSSAMKALKNTEKYEIDGKNLECS 366
KK F+ G IT VV+ Q FGF+ + + + L T +E++GK +E
Sbjct: 121 DFKKYFDQFGTITDVVVMYDHNTQRPRGFGFITYDSEEAVDQVLLKT-FHELNGKMVEVK 179
Query: 367 LAKPQ 371
A P+
Sbjct: 180 RAVPK 184
>Medtr5g017280.4 | RNA-binding (RRM/RBD/RNP motif) family protein |
HC | chr5:6293125-6298060 | 20130731
Length = 373
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 38/177 (21%), Positives = 86/177 (48%), Gaps = 8/177 (4%)
Query: 197 KHRLFIGNIPKKWTVEDMKKVVADVGPGVISIELLKDLQSSGRNRGFAFIEYYNHACAEY 256
+ +L + IP E +K+ ++ G + ++ +S+GR+RGF ++ + A +
Sbjct: 3 QRKLVVLGIPWDVDTEGLKEYMSKYGE--LEDCIVMKERSTGRSRGFGYVTF---ASVDD 57
Query: 257 SRQKMSNSNFKLENNAPTVSWADPRNSESSAVSQVKAVYVKNLPENITQDSLKKLFEHHG 316
+++ +S + L + V A P+ + +V ++V +P ++T+++ + FE +G
Sbjct: 58 AKEVLSGEHV-LGDRMLEVKVATPKEEMRAPAKKVTRIFVARIPPSVTEETFRSHFEKYG 116
Query: 317 KITKVVLPPAKAGQEKSRFGFVHFSDRSSAMKALKNTEKYEIDGKNLECSLAKPQAD 373
IT + +P + + GF+ F + S + +E +E+ G + A P+ D
Sbjct: 117 DITDLYMPKDQGSKMHRGIGFITFGNAESVENLM--SETHELGGSAVVVDRATPKED 171
>Medtr5g017280.2 | RNA-binding (RRM/RBD/RNP motif) family protein |
HC | chr5:6293125-6297976 | 20130731
Length = 397
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 38/177 (21%), Positives = 86/177 (48%), Gaps = 8/177 (4%)
Query: 197 KHRLFIGNIPKKWTVEDMKKVVADVGPGVISIELLKDLQSSGRNRGFAFIEYYNHACAEY 256
+ +L + IP E +K+ ++ G + ++ +S+GR+RGF ++ + A +
Sbjct: 3 QRKLVVLGIPWDVDTEGLKEYMSKYGE--LEDCIVMKERSTGRSRGFGYVTF---ASVDD 57
Query: 257 SRQKMSNSNFKLENNAPTVSWADPRNSESSAVSQVKAVYVKNLPENITQDSLKKLFEHHG 316
+++ +S + L + V A P+ + +V ++V +P ++T+++ + FE +G
Sbjct: 58 AKEVLSGEHV-LGDRMLEVKVATPKEEMRAPAKKVTRIFVARIPPSVTEETFRSHFEKYG 116
Query: 317 KITKVVLPPAKAGQEKSRFGFVHFSDRSSAMKALKNTEKYEIDGKNLECSLAKPQAD 373
IT + +P + + GF+ F + S + +E +E+ G + A P+ D
Sbjct: 117 DITDLYMPKDQGSKMHRGIGFITFGNAESVENLM--SETHELGGSAVVVDRATPKED 171
>Medtr5g017280.3 | RNA-binding (RRM/RBD/RNP motif) family protein |
HC | chr5:6293125-6297976 | 20130731
Length = 397
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 38/177 (21%), Positives = 86/177 (48%), Gaps = 8/177 (4%)
Query: 197 KHRLFIGNIPKKWTVEDMKKVVADVGPGVISIELLKDLQSSGRNRGFAFIEYYNHACAEY 256
+ +L + IP E +K+ ++ G + ++ +S+GR+RGF ++ + A +
Sbjct: 3 QRKLVVLGIPWDVDTEGLKEYMSKYGE--LEDCIVMKERSTGRSRGFGYVTF---ASVDD 57
Query: 257 SRQKMSNSNFKLENNAPTVSWADPRNSESSAVSQVKAVYVKNLPENITQDSLKKLFEHHG 316
+++ +S + L + V A P+ + +V ++V +P ++T+++ + FE +G
Sbjct: 58 AKEVLSGEHV-LGDRMLEVKVATPKEEMRAPAKKVTRIFVARIPPSVTEETFRSHFEKYG 116
Query: 317 KITKVVLPPAKAGQEKSRFGFVHFSDRSSAMKALKNTEKYEIDGKNLECSLAKPQAD 373
IT + +P + + GF+ F + S + +E +E+ G + A P+ D
Sbjct: 117 DITDLYMPKDQGSKMHRGIGFITFGNAESVENLM--SETHELGGSAVVVDRATPKED 171
>Medtr5g017280.1 | RNA-binding (RRM/RBD/RNP motif) family protein |
HC | chr5:6293125-6298060 | 20130731
Length = 397
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 38/177 (21%), Positives = 86/177 (48%), Gaps = 8/177 (4%)
Query: 197 KHRLFIGNIPKKWTVEDMKKVVADVGPGVISIELLKDLQSSGRNRGFAFIEYYNHACAEY 256
+ +L + IP E +K+ ++ G + ++ +S+GR+RGF ++ + A +
Sbjct: 3 QRKLVVLGIPWDVDTEGLKEYMSKYGE--LEDCIVMKERSTGRSRGFGYVTF---ASVDD 57
Query: 257 SRQKMSNSNFKLENNAPTVSWADPRNSESSAVSQVKAVYVKNLPENITQDSLKKLFEHHG 316
+++ +S + L + V A P+ + +V ++V +P ++T+++ + FE +G
Sbjct: 58 AKEVLSGEHV-LGDRMLEVKVATPKEEMRAPAKKVTRIFVARIPPSVTEETFRSHFEKYG 116
Query: 317 KITKVVLPPAKAGQEKSRFGFVHFSDRSSAMKALKNTEKYEIDGKNLECSLAKPQAD 373
IT + +P + + GF+ F + S + +E +E+ G + A P+ D
Sbjct: 117 DITDLYMPKDQGSKMHRGIGFITFGNAESVENLM--SETHELGGSAVVVDRATPKED 171
>Medtr7g013740.1 | RNA-binding (RRM/RBD/RNP motif) family protein |
HC | chr7:3990787-3988732 | 20130731
Length = 148
Score = 58.5 bits (140), Expect = 1e-08, Method: Composition-based stats.
Identities = 26/82 (31%), Positives = 49/82 (59%)
Query: 118 SEVYIGGIANNVSEEDLRVFCQSVGEVSEVRIMKAKESGEGKGYAFVAFKTKELASQAIE 177
+++Y+GGI+ + + LR G+V + R++ +E G KG+ FV F T E AS A++
Sbjct: 40 AKLYVGGISYSTDDAGLRESFARYGDVLDARVIIDREQGRSKGFGFVTFATSEEASAALQ 99
Query: 178 ELNNSEFKGKKIKCSSSQAKHR 199
++N E G+ ++ + +Q + R
Sbjct: 100 AMDNQELHGRTVRVNYAQERPR 121
>Medtr2g026180.2 | RNA-binding (RRM/RBD/RNP motif) family protein |
HC | chr2:9465398-9461370 | 20130731
Length = 481
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 39/152 (25%), Positives = 72/152 (47%), Gaps = 24/152 (15%)
Query: 119 EVYIGGIANNVSEEDLRVFCQSVGEVSEVRIMKAKESGEGKGYAFVAFKTKELASQAIEE 178
+++IGGI+ + +E+ LR + Q+ G+V E IMK + +G +G+ FV F +A + + E
Sbjct: 5 KLFIGGISWDTNEDRLRQYFQNFGDVVEAVIMKDRTTGRARGFGFVVFADPSVAERVVME 64
Query: 179 ---LNNSEFKGKK--------IKCSSSQAKH-----------RLFIGNIPKKWTVEDMKK 216
++ + KK + S+ + H ++F+G + T D K
Sbjct: 65 KHVIDGRTVEAKKAVPRDDQNVFTRSNSSSHGSPAPTPIRTKKIFVGGLASTVTESDFKN 124
Query: 217 VVADVGPGVISIELLKDLQSSGRNRGFAFIEY 248
G + + ++ D ++ R RGF FI Y
Sbjct: 125 YFDQFGT-ITDVVVMYD-HNTQRPRGFGFITY 154
>Medtr2g026180.3 | RNA-binding (RRM/RBD/RNP motif) family protein |
HC | chr2:9465402-9461271 | 20130731
Length = 481
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 39/152 (25%), Positives = 72/152 (47%), Gaps = 24/152 (15%)
Query: 119 EVYIGGIANNVSEEDLRVFCQSVGEVSEVRIMKAKESGEGKGYAFVAFKTKELASQAIEE 178
+++IGGI+ + +E+ LR + Q+ G+V E IMK + +G +G+ FV F +A + + E
Sbjct: 5 KLFIGGISWDTNEDRLRQYFQNFGDVVEAVIMKDRTTGRARGFGFVVFADPSVAERVVME 64
Query: 179 ---LNNSEFKGKK--------IKCSSSQAKH-----------RLFIGNIPKKWTVEDMKK 216
++ + KK + S+ + H ++F+G + T D K
Sbjct: 65 KHVIDGRTVEAKKAVPRDDQNVFTRSNSSSHGSPAPTPIRTKKIFVGGLASTVTESDFKN 124
Query: 217 VVADVGPGVISIELLKDLQSSGRNRGFAFIEY 248
G + + ++ D ++ R RGF FI Y
Sbjct: 125 YFDQFGT-ITDVVVMYD-HNTQRPRGFGFITY 154
>Medtr2g026180.1 | RNA-binding (RRM/RBD/RNP motif) family protein |
HC | chr2:9465359-9461307 | 20130731
Length = 481
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 39/152 (25%), Positives = 72/152 (47%), Gaps = 24/152 (15%)
Query: 119 EVYIGGIANNVSEEDLRVFCQSVGEVSEVRIMKAKESGEGKGYAFVAFKTKELASQAIEE 178
+++IGGI+ + +E+ LR + Q+ G+V E IMK + +G +G+ FV F +A + + E
Sbjct: 5 KLFIGGISWDTNEDRLRQYFQNFGDVVEAVIMKDRTTGRARGFGFVVFADPSVAERVVME 64
Query: 179 ---LNNSEFKGKK--------IKCSSSQAKH-----------RLFIGNIPKKWTVEDMKK 216
++ + KK + S+ + H ++F+G + T D K
Sbjct: 65 KHVIDGRTVEAKKAVPRDDQNVFTRSNSSSHGSPAPTPIRTKKIFVGGLASTVTESDFKN 124
Query: 217 VVADVGPGVISIELLKDLQSSGRNRGFAFIEY 248
G + + ++ D ++ R RGF FI Y
Sbjct: 125 YFDQFGT-ITDVVVMYD-HNTQRPRGFGFITY 154
>Medtr4g104470.1 | 31 kDa ribonucleoprotein | HC |
chr4:43224367-43221650 | 20130731
Length = 300
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 44/176 (25%), Positives = 83/176 (47%), Gaps = 10/176 (5%)
Query: 199 RLFIGNIPKKWTVEDMKKVVADVGPGVISIELLKDLQSSGRNRGFAFIEYYNHACAEYSR 258
++F+GN+P E + ++ G + I + + + R+RGF F+ E +
Sbjct: 123 KIFVGNLPFDVDSEKLAQLFEQ--SGTVEIAEVIYNRDTDRSRGFGFVTMSTSEEVERAV 180
Query: 259 QKMSNSNFKLENNAPTVSWADPRNS----ESSAVSQVKAVYVKNLPENITQDSLKKLFEH 314
K S F+L+ TV+ A PR + + + YV NLP ++ SL++LF
Sbjct: 181 NKFSG--FELDGRLLTVNKAAPRGTPRLRQPRTFNSGLRAYVGNLPWDVDNSSLEQLFSE 238
Query: 315 HGKITKV-VLPPAKAGQEKSRFGFVHFSDRSSAMKALKNTEKYEIDGKNLECSLAK 369
HGK+ V+ + G+ + FGFV S+ + A+ + +G+ + ++A+
Sbjct: 239 HGKVESAQVVYDRETGRSRG-FGFVTMSNEAEMNDAIAALDGQSFNGRAIRVNVAE 293
Score = 50.4 bits (119), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 33/155 (21%), Positives = 74/155 (47%), Gaps = 20/155 (12%)
Query: 114 PPHGSEVYIGGIANNVSEEDLRVFCQSVGEVSEVRIMKAKESGEGKGYAFVAFKTKELAS 173
P ++++G + +V E L + G V ++ +++ +G+ FV T E
Sbjct: 118 PSEDLKIFVGNLPFDVDSEKLAQLFEQSGTVEIAEVIYNRDTDRSRGFGFVTMSTSEEVE 177
Query: 174 QAIEELNNSEFKGKKIKCSSSQAKH--------------RLFIGNIPKKWTVED--MKKV 217
+A+ + + E G+ + + + + R ++GN+P W V++ ++++
Sbjct: 178 RAVNKFSGFELDGRLLTVNKAAPRGTPRLRQPRTFNSGLRAYVGNLP--WDVDNSSLEQL 235
Query: 218 VADVGPGVISIELLKDLQSSGRNRGFAFIEYYNHA 252
++ G V S +++ D + +GR+RGF F+ N A
Sbjct: 236 FSEHGK-VESAQVVYD-RETGRSRGFGFVTMSNEA 268
>Medtr4g109540.1 | RNA-binding (RRM/RBD/RNP motif) family protein |
HC | chr4:45527069-45523373 | 20130731
Length = 268
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 24/83 (28%), Positives = 50/83 (60%)
Query: 118 SEVYIGGIANNVSEEDLRVFCQSVGEVSEVRIMKAKESGEGKGYAFVAFKTKELASQAIE 177
++++IGG++ + E LR GEV + RI+ +E+G +G+ F+ F + E AS AI+
Sbjct: 42 TKLFIGGVSYSTDENSLREAFSRYGEVLDARIIMDRETGRSRGFGFITFNSVEEASSAIQ 101
Query: 178 ELNNSEFKGKKIKCSSSQAKHRL 200
L+ + G++++ + + + R+
Sbjct: 102 ALDGQDLHGRRVRVNYANERPRV 124
>Medtr7g013730.1 | RNA-binding (RRM/RBD/RNP motif) family protein |
HC | chr7:3986546-3983001 | 20130731
Length = 253
Score = 56.2 bits (134), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 27/106 (25%), Positives = 57/106 (53%), Gaps = 1/106 (0%)
Query: 95 VDHTNDEVEKKKHAELLALPPHGS-EVYIGGIANNVSEEDLRVFCQSVGEVSEVRIMKAK 153
V H N ++ + A+ S +++IGG++ + E LR G+V + +I+ +
Sbjct: 16 VKHINHDLSMSTPSLFQAIRSMSSAKLFIGGVSYSTDETGLREAFSRYGDVLDAKIIMDR 75
Query: 154 ESGEGKGYAFVAFKTKELASQAIEELNNSEFKGKKIKCSSSQAKHR 199
++G +G+ F+ F T E AS A++ ++N E G+ ++ + + + R
Sbjct: 76 DTGRSRGFGFITFATSEEASSALQAMDNKELDGRTVRVNYATERAR 121
>Medtr7g013730.2 | RNA-binding (RRM/RBD/RNP motif) family protein |
HC | chr7:3986488-3983001 | 20130731
Length = 253
Score = 56.2 bits (134), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 27/106 (25%), Positives = 57/106 (53%), Gaps = 1/106 (0%)
Query: 95 VDHTNDEVEKKKHAELLALPPHGS-EVYIGGIANNVSEEDLRVFCQSVGEVSEVRIMKAK 153
V H N ++ + A+ S +++IGG++ + E LR G+V + +I+ +
Sbjct: 16 VKHINHDLSMSTPSLFQAIRSMSSAKLFIGGVSYSTDETGLREAFSRYGDVLDAKIIMDR 75
Query: 154 ESGEGKGYAFVAFKTKELASQAIEELNNSEFKGKKIKCSSSQAKHR 199
++G +G+ F+ F T E AS A++ ++N E G+ ++ + + + R
Sbjct: 76 DTGRSRGFGFITFATSEEASSALQAMDNKELDGRTVRVNYATERAR 121
>Medtr1g056520.1 | RNA recognition motif, a.k.a. RRM, RBD protein |
HC | chr1:24700218-24705084 | 20130731
Length = 311
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 50/187 (26%), Positives = 84/187 (44%), Gaps = 12/187 (6%)
Query: 190 KCSSSQAKHRLFIGNIPKKWTVEDMKKVVADVGPGVISIELLKDLQSSGRNRGFAFIEYY 249
+ S+Q++ RLF+GN+P + + ++ + G V+S+E+L D + R+RGFAF+
Sbjct: 101 EAESTQSR-RLFVGNLPFSLSSSQLAQLFGEAG-NVVSVEILYD-DITNRSRGFAFVTMG 157
Query: 250 NHACAEYSRQKMSNSNF---KLENNAPTVSWADPRNSESSA----VSQVKAVYVKNLPEN 302
N AE + + + ++ N P V R S V +Y NL +
Sbjct: 158 NVEDAEEAIRMFDGTTVGGRAIKVNFPEVPIVGKRVQMGSTYRGYVDSPHKIYAGNLGWD 217
Query: 303 ITQDSLKKLFEHH-GKITKVVLPPAKAGQEKSRFGFVHFSDRSSAMKALKNTEKYEIDGK 361
+T L+K F G ++ V+ G+ + +GFV F AL E+ G+
Sbjct: 218 MTSQYLRKAFAKQPGLLSAKVVYERNNGKSRG-YGFVSFETAEDVEVALSAMNGVEVQGR 276
Query: 362 NLECSLA 368
L LA
Sbjct: 277 PLRLKLA 283
>Medtr1g056520.2 | RNA recognition motif, a.k.a. RRM, RBD protein |
HC | chr1:24700221-24703822 | 20130731
Length = 311
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 50/187 (26%), Positives = 84/187 (44%), Gaps = 12/187 (6%)
Query: 190 KCSSSQAKHRLFIGNIPKKWTVEDMKKVVADVGPGVISIELLKDLQSSGRNRGFAFIEYY 249
+ S+Q++ RLF+GN+P + + ++ + G V+S+E+L D + R+RGFAF+
Sbjct: 101 EAESTQSR-RLFVGNLPFSLSSSQLAQLFGEAG-NVVSVEILYD-DITNRSRGFAFVTMG 157
Query: 250 NHACAEYSRQKMSNSNF---KLENNAPTVSWADPRNSESSA----VSQVKAVYVKNLPEN 302
N AE + + + ++ N P V R S V +Y NL +
Sbjct: 158 NVEDAEEAIRMFDGTTVGGRAIKVNFPEVPIVGKRVQMGSTYRGYVDSPHKIYAGNLGWD 217
Query: 303 ITQDSLKKLFEHH-GKITKVVLPPAKAGQEKSRFGFVHFSDRSSAMKALKNTEKYEIDGK 361
+T L+K F G ++ V+ G+ + +GFV F AL E+ G+
Sbjct: 218 MTSQYLRKAFAKQPGLLSAKVVYERNNGKSRG-YGFVSFETAEDVEVALSAMNGVEVQGR 276
Query: 362 NLECSLA 368
L LA
Sbjct: 277 PLRLKLA 283
>Medtr3g075500.1 | 31 kDa ribonucleoprotein | HC |
chr3:34381451-34378914 | 20130731
Length = 291
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 37/179 (20%), Positives = 81/179 (45%), Gaps = 28/179 (15%)
Query: 114 PPHGSEVYIGGIANNVSEEDLRVFCQSVGEVSEVRIMKAKESGEGKGYAFVAFKTKELAS 173
PP +++++G +V E L + G V ++ +++ +G+ FV T E A
Sbjct: 105 PPEDAKLFVGNFPFDVDSEKLAMLFGQAGTVEIAEVIYNRQTDLSRGFGFVTMSTVEEAE 164
Query: 174 QAIEELNNSEFKGKKIKCSSSQAKH-----------------RLFIGNIPKKWTVED--M 214
A+E+ N ++ G+ + + + K R+++ N+ W V++ +
Sbjct: 165 SAVEKFNGYDYNGRSLVVNKASPKGSRPERTERAPRTFEPVLRIYVANL--AWEVDNSRL 222
Query: 215 KKVVADVGPGVISIELLKDLQSSGRNRGFAFIEY-----YNHACAEYSRQKMSNSNFKL 268
++V ++ G ++S ++ D + +GR+RGF F+ N A A Q + ++
Sbjct: 223 EQVFSEHGK-IVSARVVYD-RETGRSRGFGFVTMSDETEMNDAIAALDGQSLEGRTIRV 279
Score = 52.8 bits (125), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 44/179 (24%), Positives = 82/179 (45%), Gaps = 13/179 (7%)
Query: 199 RLFIGNIPKKWTVEDMKKVVADVGPGVISIELLKDLQSSGRNRGFAFIEYYNHACAEYSR 258
+LF+GN P E + + G I+ E++ + Q+ +RGF F+ AE +
Sbjct: 110 KLFVGNFPFDVDSEKLAMLFGQAGTVEIA-EVIYNRQTD-LSRGFGFVTMSTVEEAESAV 167
Query: 259 QKMSNSNFKLENNAPTVSWADPRNSESSAVSQ-------VKAVYVKNLPENITQDSLKKL 311
+K + ++ + V+ A P+ S + V +YV NL + L+++
Sbjct: 168 EKFNGYDYN--GRSLVVNKASPKGSRPERTERAPRTFEPVLRIYVANLAWEVDNSRLEQV 225
Query: 312 FEHHGKITKV-VLPPAKAGQEKSRFGFVHFSDRSSAMKALKNTEKYEIDGKNLECSLAK 369
F HGKI V+ + G+ + FGFV SD + A+ + ++G+ + S+A+
Sbjct: 226 FSEHGKIVSARVVYDRETGRSRG-FGFVTMSDETEMNDAIAALDGQSLEGRTIRVSVAE 283
>Medtr3g075500.2 | 31 kDa ribonucleoprotein | HC |
chr3:34381440-34379306 | 20130731
Length = 271
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 33/152 (21%), Positives = 74/152 (48%), Gaps = 23/152 (15%)
Query: 114 PPHGSEVYIGGIANNVSEEDLRVFCQSVGEVSEVRIMKAKESGEGKGYAFVAFKTKELAS 173
PP +++++G +V E L + G V ++ +++ +G+ FV T E A
Sbjct: 105 PPEDAKLFVGNFPFDVDSEKLAMLFGQAGTVEIAEVIYNRQTDLSRGFGFVTMSTVEEAE 164
Query: 174 QAIEELNNSEFKGKKIKCSSSQAKH-----------------RLFIGNIPKKWTVED--M 214
A+E+ N ++ G+ + + + K R+++ N+ W V++ +
Sbjct: 165 SAVEKFNGYDYNGRSLVVNKASPKGSRPERTERAPRTFEPVLRIYVANL--AWEVDNSRL 222
Query: 215 KKVVADVGPGVISIELLKDLQSSGRNRGFAFI 246
++V ++ G ++S ++ D + +GR+RGF F+
Sbjct: 223 EQVFSEHGK-IVSARVVYD-RETGRSRGFGFV 252
>Medtr1g097280.1 | cleavage stimulating factor, putative | HC |
chr1:43879642-43873268 | 20130731
Length = 572
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 23/72 (31%), Positives = 40/72 (55%)
Query: 120 VYIGGIANNVSEEDLRVFCQSVGEVSEVRIMKAKESGEGKGYAFVAFKTKELASQAIEEL 179
V++G I + +EE L+ C+ VG V R++ +E+G+ KGY F + +E A A L
Sbjct: 31 VFVGNIPYDATEEQLKEICREVGPVISFRLVTDRETGKPKGYGFCEYTDEETALSARRNL 90
Query: 180 NNSEFKGKKIKC 191
E G++++
Sbjct: 91 QGYEINGRQLRV 102
Score = 49.3 bits (116), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 23/81 (28%), Positives = 44/81 (54%)
Query: 289 SQVKAVYVKNLPENITQDSLKKLFEHHGKITKVVLPPAKAGQEKSRFGFVHFSDRSSAMK 348
SQ + V+V N+P + T++ LK++ G + L + + +GF ++D +A+
Sbjct: 26 SQHRTVFVGNIPYDATEEQLKEICREVGPVISFRLVTDRETGKPKGYGFCEYTDEETALS 85
Query: 349 ALKNTEKYEIDGKNLECSLAK 369
A +N + YEI+G+ L A+
Sbjct: 86 ARRNLQGYEINGRQLRVDFAE 106
>Medtr8g022050.1 | nucleolysin TIAR-like protein | HC |
chr8:7704241-7709952 | 20130731
Length = 427
Score = 54.3 bits (129), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 69/300 (23%), Positives = 124/300 (41%), Gaps = 56/300 (18%)
Query: 114 PPHGSEVYIGGIANNVSEEDLRVFCQSVGEVSEVRIMKAKESGEGKGYAFVAFKTKELAS 173
P VY+G + V+E L+ G V ++ + ++S Y F+ + + A+
Sbjct: 58 PSTCRSVYVGNVHTQVTEPLLQEVFAGTGPVEGCKLFRKEKSS----YGFIHYFDRRSAA 113
Query: 174 QAIEELNNSEFKGKKIKCSSSQAK---------HRLFIGNIPKKWTVEDMKKVVADVGPG 224
AI LN G+ IK + + A + +F+G++ + T + + V
Sbjct: 114 LAILTLNGRHLFGQPIKVNWAYASGQREDTSGHYNIFVGDLSPEVTDATLFACFS-VYQS 172
Query: 225 VISIELLKDLQSSGRNRGFAFIEYYNHACAEYSRQKMSNSNFKLENNAPTVSWA------ 278
++ D Q +GR+RGF F+ + + A+ + ++ L + +WA
Sbjct: 173 CSDARVMWD-QKTGRSRGFGFVSFRSQQDAQSAINDLTGK--WLGSRQIRCNWATKGAGG 229
Query: 279 --DPRNSESSAV-----------------------SQVKAVYVKNLPENITQDSLKKLFE 313
+ +NS+S +V Q VYV NL TQ L + F
Sbjct: 230 IEEKQNSDSKSVVELTNGSSEDGKEISSNDVPENNPQYTTVYVGNLGSEATQLDLHRHFH 289
Query: 314 HHGKITKVVLPPAKAGQEKSRFGFVHFSDRSSAMKALK--NTEKYEIDGKNLECSL-AKP 370
G V+ + ++K FGFV +S + A A++ N + Y + GK ++CS +KP
Sbjct: 290 ALG---AGVIEEVRVQRDKG-FGFVRYSTHAEAALAIQMGNAQSY-LCGKIIKCSWGSKP 344
>Medtr3g084040.1 | RNA-binding (RRM/RBD/RNP motif) family protein |
HC | chr3:37961723-37963823 | 20130731
Length = 146
Score = 54.3 bits (129), Expect = 3e-07, Method: Composition-based stats.
Identities = 24/81 (29%), Positives = 50/81 (61%), Gaps = 1/81 (1%)
Query: 118 SEVYIGGIANNVSEEDLRVFCQSVGEVSEVRIMKAKESGEGKGYAFVAFKTKELASQAIE 177
S+++IGG++ NV ++ LR + G+V E R++ +E+G +G+ FV F ++E A+ A+
Sbjct: 36 SKLFIGGLSYNVDDQSLRDAFTTYGDVVEARVITDRETGRSRGFGFVNFTSEESATSAL- 94
Query: 178 ELNNSEFKGKKIKCSSSQAKH 198
++ + G+ I+ S + +
Sbjct: 95 SMDGQDLNGRNIRVSYANDRQ 115
>Medtr4g088010.1 | heterogeneous nuclear ribonucleoprotein | HC |
chr4:34502474-34498575 | 20130731
Length = 356
Score = 53.9 bits (128), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 34/137 (24%), Positives = 68/137 (49%), Gaps = 9/137 (6%)
Query: 119 EVYIGGIANNVSEEDLRVFCQSVGEVSEVRIMKAKESGEGKGYAFVAFKTKELASQAIEE 178
++++ G++ + E LR S G++ E ++ K +G KGY FV ++ + A A++E
Sbjct: 77 KLFVRGLSGETTTETLRTVFSSYGDLDEAIVIFDKATGRSKGYGFVVYRHVDGAVLALKE 136
Query: 179 LN---NSEFKGKKIKCSSSQ----AKHRLFIGNIPKKWTVEDMKKVVADVGPGVISIELL 231
+ + ++ + S + ++F+GN+P + + E + + G I L
Sbjct: 137 PSKKIDGRMTVTQLAAAGSTGGDVSSRKVFVGNVPFEVSAESLLSEFSKY--GEIEEGPL 194
Query: 232 KDLQSSGRNRGFAFIEY 248
++SG+ RGFAF Y
Sbjct: 195 GFDKASGKTRGFAFFVY 211
>Medtr3g025880.2 | RNA-binding (RRM/RBD/RNP motif) family protein |
LC | chr3:7898677-7894080 | 20130731
Length = 447
Score = 53.9 bits (128), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 48/82 (58%)
Query: 118 SEVYIGGIANNVSEEDLRVFCQSVGEVSEVRIMKAKESGEGKGYAFVAFKTKELASQAIE 177
+++++GGI+ N E+ L G+V + RI+ +ESG KG+ FV + T E AS AI+
Sbjct: 44 TKLFVGGISYNTDEQSLSDAFSKYGQVLDARIIMDRESGRSKGFGFVTYNTVEEASSAIQ 103
Query: 178 ELNNSEFKGKKIKCSSSQAKHR 199
L+ + G+++ + + + R
Sbjct: 104 ALDGQDLYGRRVGVNFANERPR 125
>Medtr3g025880.1 | RNA-binding (RRM/RBD/RNP motif) family protein |
LC | chr3:7898604-7894080 | 20130731
Length = 447
Score = 53.9 bits (128), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 48/82 (58%)
Query: 118 SEVYIGGIANNVSEEDLRVFCQSVGEVSEVRIMKAKESGEGKGYAFVAFKTKELASQAIE 177
+++++GGI+ N E+ L G+V + RI+ +ESG KG+ FV + T E AS AI+
Sbjct: 44 TKLFVGGISYNTDEQSLSDAFSKYGQVLDARIIMDRESGRSKGFGFVTYNTVEEASSAIQ 103
Query: 178 ELNNSEFKGKKIKCSSSQAKHR 199
L+ + G+++ + + + R
Sbjct: 104 ALDGQDLYGRRVGVNFANERPR 125
>Medtr4g074930.4 | RNA recognition motif, a.k.a. RRM, RBD protein |
HC | chr4:28567458-28562229 | 20130731
Length = 588
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 56/191 (29%), Positives = 87/191 (45%), Gaps = 23/191 (12%)
Query: 200 LFIGNIPKKWTVEDMKKVVADVGPGVISIELLKDLQSSGRNRGFAFIEYYNHACAEYSRQ 259
LF+GN+ D++K D G V+ + D + GR +GF +E+ A AE ++
Sbjct: 331 LFVGNLSFSVQRSDIEKFFQDCGE-VVDVRFSSDEE--GRFKGFGHVEF---ASAEAAQS 384
Query: 260 KMSNSNFKLENNAPTVSWADPR-------NSESSAVS----QVKAVYVKNLPENITQDSL 308
+ + +L A + A R NS SA S Q + V+V+ +N+ +D +
Sbjct: 385 ALEMNGQELLQRAVRLDLARERGAFTPNNNSNYSAQSGGRGQSQTVFVRGFDKNLGEDEI 444
Query: 309 K-KLFEHHGKI----TKVVLPPAKAGQEKSRFGFVHFSDRSSAMKALKNTEKYEIDGKNL 363
+ KL EH G T+V +P F ++ F D S KAL+ E E+DG L
Sbjct: 445 RAKLMEHFGGTCGEPTRVSIPKDFESGYSKGFAYMDFKDSDSFSKALELHE-SELDGYQL 503
Query: 364 ECSLAKPQADQ 374
AKP+ Q
Sbjct: 504 SVDEAKPRDSQ 514
>Medtr4g124940.1 | nucleolysin TIAR-like protein | HC |
chr4:51822192-51817182 | 20130731
Length = 404
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 67/292 (22%), Positives = 118/292 (40%), Gaps = 53/292 (18%)
Query: 120 VYIGGIANNVSEEDLRVFCQSVGEVSEVRIMKAKESGEGKGYAFVAFKTKELASQAIEEL 179
VY+G I VSE L+ S G + ++++ ++S Y FV + + A+ AI L
Sbjct: 48 VYVGNIHPQVSEPLLQELFSSAGALEGCKLIRKEKS----SYGFVDYFDRSSAAIAIVTL 103
Query: 180 NNSEFKGKKIKCSSSQAK---------HRLFIGNIPKKWTVEDMKKVVADVGPGVISIEL 230
N G+ IK + + + +F+G++ + T + + +
Sbjct: 104 NGRNIFGQSIKVNWAYTRGQREDTSGHFHIFVGDLSPEVTDATLYACFSAYS-SCSDARV 162
Query: 231 LKDLQSSGRNRGFAFIEYYNHACAEYSRQKMSNSNFKLENNAPTVSWA--------DPRN 282
+ D Q +GR+RGF F+ + N A+ + ++ L + +WA + ++
Sbjct: 163 MWD-QKTGRSRGFGFVSFRNQQEAQSAINDLTGK--WLGSRQIRCNWATKGANMNGENQS 219
Query: 283 SESSAV-----------------------SQVKAVYVKNLPENITQDSLKKLFEHHGKIT 319
SES +V Q VYV NL +T L F G T
Sbjct: 220 SESKSVVELTSGTSEEAQEMTSDDSPEKNPQYTTVYVGNLAPEVTSVDLHHHFHALGVGT 279
Query: 320 KVVLPPAKAGQEKSRFGFVHFSDRSSAMKALKNTEKYEIDGKNLECSL-AKP 370
+ + ++K FGFV +S A A++ + GK ++CS +KP
Sbjct: 280 ---IEDVRVQRDKG-FGFVRYSTHGEAALAIQMGNTRFLFGKPIKCSWGSKP 327
>Medtr3g080130.1 | RNA-binding (RRM/RBD/RNP motif) family protein |
HC | chr3:36253866-36255120 | 20130731
Length = 135
Score = 53.5 bits (127), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 24/82 (29%), Positives = 50/82 (60%)
Query: 118 SEVYIGGIANNVSEEDLRVFCQSVGEVSEVRIMKAKESGEGKGYAFVAFKTKELASQAIE 177
+++++GG++ +V E+ L+ S G+V+EVRI+ K+SG +G+ FV F ++ A A +
Sbjct: 36 NKLFVGGLSWSVDEKSLKDAFSSFGDVTEVRIVYDKDSGRARGFGFVIFSNEDAAKSAKD 95
Query: 178 ELNNSEFKGKKIKCSSSQAKHR 199
++ G+ ++ + + K R
Sbjct: 96 AMDGKALLGRPLRINFALEKPR 117
>Medtr7g109810.1 | flowering time control FCA-like protein | HC |
chr7:44985779-44978011 | 20130731
Length = 498
Score = 53.5 bits (127), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 40/153 (26%), Positives = 69/153 (45%), Gaps = 17/153 (11%)
Query: 119 EVYIGGIANNVSEEDLRVFCQSVGEVSEVRIMKAKESGEGKGYAFVAFKTKELASQAIEE 178
+VY+ + SE D+R+ Q G + EV +++ K +G +G V + T + A AI+
Sbjct: 75 KVYVAPVPRTASEADVRLVFQGYGTIVEVVLLRDKATGVRQGSCLVKYSTFDEADMAIKA 134
Query: 179 LNNS-EFKGKK---IKCSSSQAKHRLFIGNIPKKWTVEDMKKVVADVGPGVISIELLKD- 233
L+N F G+ + + + + R + + + D +VV V G I+ E K
Sbjct: 135 LSNQYTFPGESSPVVVRFADRKRERFGLRDFCQNMERRDPPEVVGKVYVGCINNEASKQE 194
Query: 234 ----LQSSG--------RNRGFAFIEYYNHACA 254
G RNRG+ F+++YN A
Sbjct: 195 IEEIFSPYGHIEDVVVLRNRGYGFVKFYNREMA 227
>Medtr4g074930.3 | RNA recognition motif, a.k.a. RRM, RBD protein |
HC | chr4:28567458-28562229 | 20130731
Length = 600
Score = 53.5 bits (127), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 56/191 (29%), Positives = 87/191 (45%), Gaps = 23/191 (12%)
Query: 200 LFIGNIPKKWTVEDMKKVVADVGPGVISIELLKDLQSSGRNRGFAFIEYYNHACAEYSRQ 259
LF+GN+ D++K D G V+ + D + GR +GF +E+ A AE ++
Sbjct: 343 LFVGNLSFSVQRSDIEKFFQDCGE-VVDVRFSSDEE--GRFKGFGHVEF---ASAEAAQS 396
Query: 260 KMSNSNFKLENNAPTVSWADPR-------NSESSAVS----QVKAVYVKNLPENITQDSL 308
+ + +L A + A R NS SA S Q + V+V+ +N+ +D +
Sbjct: 397 ALEMNGQELLQRAVRLDLARERGAFTPNNNSNYSAQSGGRGQSQTVFVRGFDKNLGEDEI 456
Query: 309 K-KLFEHHGKI----TKVVLPPAKAGQEKSRFGFVHFSDRSSAMKALKNTEKYEIDGKNL 363
+ KL EH G T+V +P F ++ F D S KAL+ E E+DG L
Sbjct: 457 RAKLMEHFGGTCGEPTRVSIPKDFESGYSKGFAYMDFKDSDSFSKALELHE-SELDGYQL 515
Query: 364 ECSLAKPQADQ 374
AKP+ Q
Sbjct: 516 SVDEAKPRDSQ 526
>Medtr7g109810.2 | flowering time control FCA-like protein | HC |
chr7:44985779-44978011 | 20130731
Length = 385
Score = 53.1 bits (126), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 40/153 (26%), Positives = 69/153 (45%), Gaps = 17/153 (11%)
Query: 119 EVYIGGIANNVSEEDLRVFCQSVGEVSEVRIMKAKESGEGKGYAFVAFKTKELASQAIEE 178
+VY+ + SE D+R+ Q G + EV +++ K +G +G V + T + A AI+
Sbjct: 75 KVYVAPVPRTASEADVRLVFQGYGTIVEVVLLRDKATGVRQGSCLVKYSTFDEADMAIKA 134
Query: 179 LNNS-EFKGKK---IKCSSSQAKHRLFIGNIPKKWTVEDMKKVVADVGPGVISIELLKD- 233
L+N F G+ + + + + R + + + D +VV V G I+ E K
Sbjct: 135 LSNQYTFPGESSPVVVRFADRKRERFGLRDFCQNMERRDPPEVVGKVYVGCINNEASKQE 194
Query: 234 ----LQSSG--------RNRGFAFIEYYNHACA 254
G RNRG+ F+++YN A
Sbjct: 195 IEEIFSPYGHIEDVVVLRNRGYGFVKFYNREMA 227
>Medtr4g074930.1 | RNA recognition motif, a.k.a. RRM, RBD protein |
HC | chr4:28567463-28562229 | 20130731
Length = 623
Score = 52.8 bits (125), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 56/191 (29%), Positives = 87/191 (45%), Gaps = 23/191 (12%)
Query: 200 LFIGNIPKKWTVEDMKKVVADVGPGVISIELLKDLQSSGRNRGFAFIEYYNHACAEYSRQ 259
LF+GN+ D++K D G V+ + D + GR +GF +E+ A AE ++
Sbjct: 366 LFVGNLSFSVQRSDIEKFFQDCG-EVVDVRFSSDEE--GRFKGFGHVEF---ASAEAAQS 419
Query: 260 KMSNSNFKLENNAPTVSWADPR-------NSESSAVS----QVKAVYVKNLPENITQDSL 308
+ + +L A + A R NS SA S Q + V+V+ +N+ +D +
Sbjct: 420 ALEMNGQELLQRAVRLDLARERGAFTPNNNSNYSAQSGGRGQSQTVFVRGFDKNLGEDEI 479
Query: 309 K-KLFEHHGKI----TKVVLPPAKAGQEKSRFGFVHFSDRSSAMKALKNTEKYEIDGKNL 363
+ KL EH G T+V +P F ++ F D S KAL+ E E+DG L
Sbjct: 480 RAKLMEHFGGTCGEPTRVSIPKDFESGYSKGFAYMDFKDSDSFSKALELHE-SELDGYQL 538
Query: 364 ECSLAKPQADQ 374
AKP+ Q
Sbjct: 539 SVDEAKPRDSQ 549
>Medtr7g106440.1 | 33 kDa ribonucleoprotein | HC |
chr7:43324307-43322087 | 20130731
Length = 318
Score = 52.8 bits (125), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 50/193 (25%), Positives = 82/193 (42%), Gaps = 19/193 (9%)
Query: 190 KCSSSQAKHRLFIGNIPKKWTVEDMKKVVADVGPGVISIELLKDLQSSGRNRGFAFI--- 246
K ++S RL++GN+P T + + A+ G V+S+E++ D + + R+RGFAF+
Sbjct: 101 KVTTSDDAGRLYVGNLPFSMTSSQLADIFAEAGT-VVSVEIVYD-RLTDRSRGFAFVTMK 158
Query: 247 --EYYNHACAEYSRQKMSNSNFKLENNAPTVSWADP--------RNSESSAVSQVKAVYV 296
E A + ++ + K+ N P V RNS V +Y
Sbjct: 159 SAEEAKEAIRMFDGSQVGGRSAKV--NFPEVPKGGERLVMGQKVRNSYRGFVDSPHKIYA 216
Query: 297 KNLPENITQDSLKKLF-EHHGKITKVVLPPAKAGQEKSRFGFVHFSDRSSAMKALKNTEK 355
NL + L+ F E G + ++ G+ + FGFV F AL
Sbjct: 217 GNLGWGMNSQDLRDAFDEQPGLLGAKIIYERDNGRSRG-FGFVTFETAEHLEAALNAMNG 275
Query: 356 YEIDGKNLECSLA 368
E+ G+ L +LA
Sbjct: 276 VEVQGRPLRLNLA 288
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/152 (21%), Positives = 69/152 (45%), Gaps = 25/152 (16%)
Query: 120 VYIGGIANNVSEEDLRVFCQSVGEVSEVRIMKAKESGEGKGYAFVAFKTKELASQAIEEL 179
+Y+G + +++ L G V V I+ + + +G+AFV K+ E A +AI
Sbjct: 111 LYVGNLPFSMTSSQLADIFAEAGTVVSVEIVYDRLTDRSRGFAFVTMKSAEEAKEAIRMF 170
Query: 180 NNSEFKGKKIKCSSSQ-----------------------AKHRLFIGNIPKKWTVEDMKK 216
+ S+ G+ K + + + H+++ GN+ +D++
Sbjct: 171 DGSQVGGRSAKVNFPEVPKGGERLVMGQKVRNSYRGFVDSPHKIYAGNLGWGMNSQDLRD 230
Query: 217 VVADVGPGVISIELLKDLQSSGRNRGFAFIEY 248
D PG++ +++ + + +GR+RGF F+ +
Sbjct: 231 AF-DEQPGLLGAKIIYE-RDNGRSRGFGFVTF 260
>Medtr7g094660.1 | RNA-binding (RRM/RBD/RNP motif) family protein |
HC | chr7:37745112-37734961 | 20130731
Length = 865
Score = 52.8 bits (125), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 31/108 (28%), Positives = 58/108 (53%), Gaps = 8/108 (7%)
Query: 118 SEVYIGGIANNVSEEDLRVFCQSVGEVSEVRIMKAKESGEGKGYAFVAFKTKELASQAIE 177
S + + + V+E+ L+ GE+++V++M+ K +G+ + +AF+ F+T + A AI+
Sbjct: 25 SRICVKNLPKYVAEDRLKQEFSRKGEITDVKLMRTK-NGKSRQFAFIGFRTDQEAQAAIK 83
Query: 178 ELNNSEFKGKKIKCSSSQAKHRLFIGNIPKKW----TVEDMKKVVADV 221
N S + I C +Q +L N+P+ W T +D K + DV
Sbjct: 84 YFNKSYLDTQAITCEVAQ---KLGDANLPRPWSRHSTKKDDKVITTDV 128
>Medtr4g074930.2 | RNA recognition motif, a.k.a. RRM, RBD protein |
HC | chr4:28567458-28562229 | 20130731
Length = 635
Score = 52.8 bits (125), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 56/191 (29%), Positives = 87/191 (45%), Gaps = 23/191 (12%)
Query: 200 LFIGNIPKKWTVEDMKKVVADVGPGVISIELLKDLQSSGRNRGFAFIEYYNHACAEYSRQ 259
LF+GN+ D++K D G V+ + D + GR +GF +E+ A AE ++
Sbjct: 378 LFVGNLSFSVQRSDIEKFFQDCG-EVVDVRFSSDEE--GRFKGFGHVEF---ASAEAAQS 431
Query: 260 KMSNSNFKLENNAPTVSWADPR-------NSESSAVS----QVKAVYVKNLPENITQDSL 308
+ + +L A + A R NS SA S Q + V+V+ +N+ +D +
Sbjct: 432 ALEMNGQELLQRAVRLDLARERGAFTPNNNSNYSAQSGGRGQSQTVFVRGFDKNLGEDEI 491
Query: 309 K-KLFEHHGKI----TKVVLPPAKAGQEKSRFGFVHFSDRSSAMKALKNTEKYEIDGKNL 363
+ KL EH G T+V +P F ++ F D S KAL+ E E+DG L
Sbjct: 492 RAKLMEHFGGTCGEPTRVSIPKDFESGYSKGFAYMDFKDSDSFSKALELHE-SELDGYQL 550
Query: 364 ECSLAKPQADQ 374
AKP+ Q
Sbjct: 551 SVDEAKPRDSQ 561
>Medtr3g098620.5 | RNA recognition motif 1 in plant MEI2-like
protein | HC | chr3:45044608-45037623 | 20130731
Length = 923
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 47/212 (22%), Positives = 91/212 (42%), Gaps = 18/212 (8%)
Query: 184 FKGKKIKCSSSQAKHRLFIGNIPKKWTVEDMKKVVADVGPGVISIELLKDLQSSGRNRGF 243
FKGK Q+ LF+GNI ++K + G ++ L ++ ++RGF
Sbjct: 258 FKGKS--SFGEQSSRTLFVGNITSNAEDSELKALFEQYGD-------IRTLYTACKHRGF 308
Query: 244 AFIEYYNHACAEYSRQKMSNSNFKLENNAPTVSWADPRNSESSAVSQVKAVYVKNLPENI 303
I YY+ A+ + + + N L + + ++ P+ + + + + L +
Sbjct: 309 VMISYYDLRAAQNAMKALQNRT--LSSRKLDIRYSIPKGNPTEKDIGHGTLMISGLDSAV 366
Query: 304 TQDSLKKLFEHHGKITKVVLPPAKAGQEKSRFGFVHFSDRSSAMKALKNTEKYEIDGKNL 363
+D LK++F +G+I ++ P E + ++ F D A +L++ + GK++
Sbjct: 367 LKDELKRIFGFYGEIKEIYEYP-----EMNHIKYIEFYDVRGAEASLRSLNGICLAGKHI 421
Query: 364 ECSLAKPQADQRSSGTSNSQKPVVLPTYPHRL 395
+ P+ R T SQK P H L
Sbjct: 422 KLEPGHPRNAIRM--TQPSQKGQDEPDLGHNL 451
>Medtr3g098620.3 | RNA recognition motif 1 in plant MEI2-like
protein | HC | chr3:45044605-45036753 | 20130731
Length = 923
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 47/212 (22%), Positives = 91/212 (42%), Gaps = 18/212 (8%)
Query: 184 FKGKKIKCSSSQAKHRLFIGNIPKKWTVEDMKKVVADVGPGVISIELLKDLQSSGRNRGF 243
FKGK Q+ LF+GNI ++K + G ++ L ++ ++RGF
Sbjct: 258 FKGKS--SFGEQSSRTLFVGNITSNAEDSELKALFEQYGD-------IRTLYTACKHRGF 308
Query: 244 AFIEYYNHACAEYSRQKMSNSNFKLENNAPTVSWADPRNSESSAVSQVKAVYVKNLPENI 303
I YY+ A+ + + + N L + + ++ P+ + + + + L +
Sbjct: 309 VMISYYDLRAAQNAMKALQNRT--LSSRKLDIRYSIPKGNPTEKDIGHGTLMISGLDSAV 366
Query: 304 TQDSLKKLFEHHGKITKVVLPPAKAGQEKSRFGFVHFSDRSSAMKALKNTEKYEIDGKNL 363
+D LK++F +G+I ++ P E + ++ F D A +L++ + GK++
Sbjct: 367 LKDELKRIFGFYGEIKEIYEYP-----EMNHIKYIEFYDVRGAEASLRSLNGICLAGKHI 421
Query: 364 ECSLAKPQADQRSSGTSNSQKPVVLPTYPHRL 395
+ P+ R T SQK P H L
Sbjct: 422 KLEPGHPRNAIRM--TQPSQKGQDEPDLGHNL 451
>Medtr3g098620.2 | RNA recognition motif 1 in plant MEI2-like
protein | HC | chr3:45044593-45036753 | 20130731
Length = 923
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 47/212 (22%), Positives = 91/212 (42%), Gaps = 18/212 (8%)
Query: 184 FKGKKIKCSSSQAKHRLFIGNIPKKWTVEDMKKVVADVGPGVISIELLKDLQSSGRNRGF 243
FKGK Q+ LF+GNI ++K + G ++ L ++ ++RGF
Sbjct: 258 FKGKS--SFGEQSSRTLFVGNITSNAEDSELKALFEQYGD-------IRTLYTACKHRGF 308
Query: 244 AFIEYYNHACAEYSRQKMSNSNFKLENNAPTVSWADPRNSESSAVSQVKAVYVKNLPENI 303
I YY+ A+ + + + N L + + ++ P+ + + + + L +
Sbjct: 309 VMISYYDLRAAQNAMKALQNRT--LSSRKLDIRYSIPKGNPTEKDIGHGTLMISGLDSAV 366
Query: 304 TQDSLKKLFEHHGKITKVVLPPAKAGQEKSRFGFVHFSDRSSAMKALKNTEKYEIDGKNL 363
+D LK++F +G+I ++ P E + ++ F D A +L++ + GK++
Sbjct: 367 LKDELKRIFGFYGEIKEIYEYP-----EMNHIKYIEFYDVRGAEASLRSLNGICLAGKHI 421
Query: 364 ECSLAKPQADQRSSGTSNSQKPVVLPTYPHRL 395
+ P+ R T SQK P H L
Sbjct: 422 KLEPGHPRNAIRM--TQPSQKGQDEPDLGHNL 451
>Medtr3g098620.4 | RNA recognition motif 1 in plant MEI2-like
protein | HC | chr3:45043643-45036753 | 20130731
Length = 969
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 47/212 (22%), Positives = 91/212 (42%), Gaps = 18/212 (8%)
Query: 184 FKGKKIKCSSSQAKHRLFIGNIPKKWTVEDMKKVVADVGPGVISIELLKDLQSSGRNRGF 243
FKGK Q+ LF+GNI ++K + G ++ L ++ ++RGF
Sbjct: 258 FKGKS--SFGEQSSRTLFVGNITSNAEDSELKALFEQYGD-------IRTLYTACKHRGF 308
Query: 244 AFIEYYNHACAEYSRQKMSNSNFKLENNAPTVSWADPRNSESSAVSQVKAVYVKNLPENI 303
I YY+ A+ + + + N L + + ++ P+ + + + + L +
Sbjct: 309 VMISYYDLRAAQNAMKALQNRT--LSSRKLDIRYSIPKGNPTEKDIGHGTLMISGLDSAV 366
Query: 304 TQDSLKKLFEHHGKITKVVLPPAKAGQEKSRFGFVHFSDRSSAMKALKNTEKYEIDGKNL 363
+D LK++F +G+I ++ P E + ++ F D A +L++ + GK++
Sbjct: 367 LKDELKRIFGFYGEIKEIYEYP-----EMNHIKYIEFYDVRGAEASLRSLNGICLAGKHI 421
Query: 364 ECSLAKPQADQRSSGTSNSQKPVVLPTYPHRL 395
+ P+ R T SQK P H L
Sbjct: 422 KLEPGHPRNAIRM--TQPSQKGQDEPDLGHNL 451
>Medtr3g098620.1 | RNA recognition motif 1 in plant MEI2-like
protein | HC | chr3:45044608-45036736 | 20130731
Length = 969
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 47/212 (22%), Positives = 91/212 (42%), Gaps = 18/212 (8%)
Query: 184 FKGKKIKCSSSQAKHRLFIGNIPKKWTVEDMKKVVADVGPGVISIELLKDLQSSGRNRGF 243
FKGK Q+ LF+GNI ++K + G ++ L ++ ++RGF
Sbjct: 258 FKGKS--SFGEQSSRTLFVGNITSNAEDSELKALFEQYGD-------IRTLYTACKHRGF 308
Query: 244 AFIEYYNHACAEYSRQKMSNSNFKLENNAPTVSWADPRNSESSAVSQVKAVYVKNLPENI 303
I YY+ A+ + + + N L + + ++ P+ + + + + L +
Sbjct: 309 VMISYYDLRAAQNAMKALQNRT--LSSRKLDIRYSIPKGNPTEKDIGHGTLMISGLDSAV 366
Query: 304 TQDSLKKLFEHHGKITKVVLPPAKAGQEKSRFGFVHFSDRSSAMKALKNTEKYEIDGKNL 363
+D LK++F +G+I ++ P E + ++ F D A +L++ + GK++
Sbjct: 367 LKDELKRIFGFYGEIKEIYEYP-----EMNHIKYIEFYDVRGAEASLRSLNGICLAGKHI 421
Query: 364 ECSLAKPQADQRSSGTSNSQKPVVLPTYPHRL 395
+ P+ R T SQK P H L
Sbjct: 422 KLEPGHPRNAIRM--TQPSQKGQDEPDLGHNL 451
>Medtr1g092860.1 | RNA-binding (RRM/RBD/RNP motif) family protein,
putative | HC | chr1:41816599-41813158 | 20130731
Length = 284
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 43/71 (60%)
Query: 119 EVYIGGIANNVSEEDLRVFCQSVGEVSEVRIMKAKESGEGKGYAFVAFKTKELASQAIEE 178
++++ G++ SE+ LR + GE+ EV+++ K S KGYAF+ + T+E AS A++E
Sbjct: 193 KLFVTGLSFYTSEKTLRAAFEGFGELVEVKVIIDKISKRSKGYAFIEYTTEEAASAALKE 252
Query: 179 LNNSEFKGKKI 189
+N G I
Sbjct: 253 MNGKIINGWMI 263
>Medtr3g448370.3 | RNA recognition motif 2 in plant MEI2-like
protein | HC | chr3:16170586-16165028 | 20130731
Length = 751
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 38/177 (21%), Positives = 82/177 (46%), Gaps = 14/177 (7%)
Query: 200 LFIGNIPKKWTVEDMKKVVADVGPGVISIELLKDLQSSGRNRGFAFIEYYNHACAEYSRQ 259
LF+ NI +++ + G ++ L ++ ++RGF I YY+ A + +
Sbjct: 95 LFVRNINSNVEDSELRTLFEQYGD-------IRTLYTACKHRGFVMISYYDIRAARTAMR 147
Query: 260 KMSNSNFKLENNAPTVSWADPRNSESSAVSQVKAVYVKNLPENITQDSLKKLFEHHGKIT 319
+ N L + ++ P+++ S + V NL +++ D L+++F +G++
Sbjct: 148 ALQNK--PLRRRKLDIHFSIPKDNPSEKDINQGTLVVFNLDPSVSNDDLRQIFGAYGEVK 205
Query: 320 KVVLPPAKAGQEKSRFGFVHFSDRSSAMKALKNTEKYEIDGKNLECSLAKPQADQRS 376
++ P K + F+ F D +A ALK + +I GK ++ ++P +R+
Sbjct: 206 EIRETPHKRHHK-----FIEFYDVRAADAALKALNRSDIAGKRIKLEPSRPGGARRN 257
>Medtr3g448370.4 | RNA recognition motif 2 in plant MEI2-like
protein | HC | chr3:16172198-16165028 | 20130731
Length = 867
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 38/177 (21%), Positives = 82/177 (46%), Gaps = 14/177 (7%)
Query: 200 LFIGNIPKKWTVEDMKKVVADVGPGVISIELLKDLQSSGRNRGFAFIEYYNHACAEYSRQ 259
LF+ NI +++ + G ++ L ++ ++RGF I YY+ A + +
Sbjct: 211 LFVRNINSNVEDSELRTLFEQYGD-------IRTLYTACKHRGFVMISYYDIRAARTAMR 263
Query: 260 KMSNSNFKLENNAPTVSWADPRNSESSAVSQVKAVYVKNLPENITQDSLKKLFEHHGKIT 319
+ N L + ++ P+++ S + V NL +++ D L+++F +G++
Sbjct: 264 ALQNK--PLRRRKLDIHFSIPKDNPSEKDINQGTLVVFNLDPSVSNDDLRQIFGAYGEVK 321
Query: 320 KVVLPPAKAGQEKSRFGFVHFSDRSSAMKALKNTEKYEIDGKNLECSLAKPQADQRS 376
++ P K + F+ F D +A ALK + +I GK ++ ++P +R+
Sbjct: 322 EIRETPHKRHHK-----FIEFYDVRAADAALKALNRSDIAGKRIKLEPSRPGGARRN 373
>Medtr3g448370.2 | RNA recognition motif 2 in plant MEI2-like
protein | HC | chr3:16171071-16165028 | 20130731
Length = 853
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 38/177 (21%), Positives = 82/177 (46%), Gaps = 14/177 (7%)
Query: 200 LFIGNIPKKWTVEDMKKVVADVGPGVISIELLKDLQSSGRNRGFAFIEYYNHACAEYSRQ 259
LF+ NI +++ + G ++ L ++ ++RGF I YY+ A + +
Sbjct: 197 LFVRNINSNVEDSELRTLFEQYGD-------IRTLYTACKHRGFVMISYYDIRAARTAMR 249
Query: 260 KMSNSNFKLENNAPTVSWADPRNSESSAVSQVKAVYVKNLPENITQDSLKKLFEHHGKIT 319
+ N L + ++ P+++ S + V NL +++ D L+++F +G++
Sbjct: 250 ALQNK--PLRRRKLDIHFSIPKDNPSEKDINQGTLVVFNLDPSVSNDDLRQIFGAYGEVK 307
Query: 320 KVVLPPAKAGQEKSRFGFVHFSDRSSAMKALKNTEKYEIDGKNLECSLAKPQADQRS 376
++ P K + F+ F D +A ALK + +I GK ++ ++P +R+
Sbjct: 308 EIRETPHKRHHK-----FIEFYDVRAADAALKALNRSDIAGKRIKLEPSRPGGARRN 359
>Medtr3g448370.1 | RNA recognition motif 2 in plant MEI2-like
protein | HC | chr3:16171071-16165028 | 20130731
Length = 856
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 38/177 (21%), Positives = 82/177 (46%), Gaps = 14/177 (7%)
Query: 200 LFIGNIPKKWTVEDMKKVVADVGPGVISIELLKDLQSSGRNRGFAFIEYYNHACAEYSRQ 259
LF+ NI +++ + G ++ L ++ ++RGF I YY+ A + +
Sbjct: 200 LFVRNINSNVEDSELRTLFEQYGD-------IRTLYTACKHRGFVMISYYDIRAARTAMR 252
Query: 260 KMSNSNFKLENNAPTVSWADPRNSESSAVSQVKAVYVKNLPENITQDSLKKLFEHHGKIT 319
+ N L + ++ P+++ S + V NL +++ D L+++F +G++
Sbjct: 253 ALQNK--PLRRRKLDIHFSIPKDNPSEKDINQGTLVVFNLDPSVSNDDLRQIFGAYGEVK 310
Query: 320 KVVLPPAKAGQEKSRFGFVHFSDRSSAMKALKNTEKYEIDGKNLECSLAKPQADQRS 376
++ P K + F+ F D +A ALK + +I GK ++ ++P +R+
Sbjct: 311 EIRETPHKRHHK-----FIEFYDVRAADAALKALNRSDIAGKRIKLEPSRPGGARRN 362
>Medtr3g448370.5 | RNA recognition motif 2 in plant MEI2-like
protein | HC | chr3:16171071-16165361 | 20130731
Length = 876
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 38/177 (21%), Positives = 82/177 (46%), Gaps = 14/177 (7%)
Query: 200 LFIGNIPKKWTVEDMKKVVADVGPGVISIELLKDLQSSGRNRGFAFIEYYNHACAEYSRQ 259
LF+ NI +++ + G ++ L ++ ++RGF I YY+ A + +
Sbjct: 200 LFVRNINSNVEDSELRTLFEQYGD-------IRTLYTACKHRGFVMISYYDIRAARTAMR 252
Query: 260 KMSNSNFKLENNAPTVSWADPRNSESSAVSQVKAVYVKNLPENITQDSLKKLFEHHGKIT 319
+ N L + ++ P+++ S + V NL +++ D L+++F +G++
Sbjct: 253 ALQNK--PLRRRKLDIHFSIPKDNPSEKDINQGTLVVFNLDPSVSNDDLRQIFGAYGEVK 310
Query: 320 KVVLPPAKAGQEKSRFGFVHFSDRSSAMKALKNTEKYEIDGKNLECSLAKPQADQRS 376
++ P K + F+ F D +A ALK + +I GK ++ ++P +R+
Sbjct: 311 EIRETPHKRHHK-----FIEFYDVRAADAALKALNRSDIAGKRIKLEPSRPGGARRN 362
>Medtr3g084040.2 | RNA-binding (RRM/RBD/RNP motif) family protein |
HC | chr3:37961794-37963766 | 20130731
Length = 105
Score = 51.6 bits (122), Expect = 2e-06, Method: Composition-based stats.
Identities = 21/59 (35%), Positives = 40/59 (67%)
Query: 118 SEVYIGGIANNVSEEDLRVFCQSVGEVSEVRIMKAKESGEGKGYAFVAFKTKELASQAI 176
S+++IGG++ NV ++ LR + G+V E R++ +E+G +G+ FV F ++E A+ A+
Sbjct: 36 SKLFIGGLSYNVDDQSLRDAFTTYGDVVEARVITDRETGRSRGFGFVNFTSEESATSAL 94
>Medtr4g109540.2 | RNA-binding (RRM/RBD/RNP motif) family protein |
HC | chr4:45527062-45523373 | 20130731
Length = 276
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 22/79 (27%), Positives = 45/79 (56%)
Query: 122 IGGIANNVSEEDLRVFCQSVGEVSEVRIMKAKESGEGKGYAFVAFKTKELASQAIEELNN 181
+ G++ + E LR GEV + RI+ +E+G +G+ F+ F + E AS AI+ L+
Sbjct: 54 VAGVSYSTDENSLREAFSRYGEVLDARIIMDRETGRSRGFGFITFNSVEEASSAIQALDG 113
Query: 182 SEFKGKKIKCSSSQAKHRL 200
+ G++++ + + + R+
Sbjct: 114 QDLHGRRVRVNYANERPRV 132
>Medtr7g107580.3 | RNA-binding (RRM/RBD/RNP motif) family protein |
HC | chr7:43890650-43885583 | 20130731
Length = 362
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 39/171 (22%), Positives = 85/171 (49%), Gaps = 14/171 (8%)
Query: 119 EVYIGGIANNVSEEDLRVFCQSVGEVSEVRIMKAKESGEGKGYAFVAFKTKELASQAIEE 178
++++G + +++E++L + V EV I+K K + +G FV +++ A +A+
Sbjct: 17 KLFVGQVPKHMTEDELLTLFKEFAIVDEVNIIKDKATRASRGCCFVICPSRDEADKAVNA 76
Query: 179 LNN--------SEFKGKKIKCSSSQAKHRLFIGNIPKKWTVEDMKKVVADVGPGVISIEL 230
+N S + K + +H+LFIG +PK + ++ + + G + +++
Sbjct: 77 CHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNISEVEVSALFSKYG-TIKDLQI 135
Query: 231 LKDLQSSGRNRGFAFIEYYNHACAEYSRQKMSNSNFKLENNAP--TVSWAD 279
L+ Q + ++G AF++Y A + + + N K+E ++ V WAD
Sbjct: 136 LRGSQQT--SKGCAFLKYETKEQALAALEAI-NGKHKMEGSSVPLVVKWAD 183
>Medtr7g107580.1 | RNA-binding (RRM/RBD/RNP motif) family protein |
HC | chr7:43890650-43885583 | 20130731
Length = 433
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 39/171 (22%), Positives = 85/171 (49%), Gaps = 14/171 (8%)
Query: 119 EVYIGGIANNVSEEDLRVFCQSVGEVSEVRIMKAKESGEGKGYAFVAFKTKELASQAIEE 178
++++G + +++E++L + V EV I+K K + +G FV +++ A +A+
Sbjct: 17 KLFVGQVPKHMTEDELLTLFKEFAIVDEVNIIKDKATRASRGCCFVICPSRDEADKAVNA 76
Query: 179 LNN--------SEFKGKKIKCSSSQAKHRLFIGNIPKKWTVEDMKKVVADVGPGVISIEL 230
+N S + K + +H+LFIG +PK + ++ + + G + +++
Sbjct: 77 CHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNISEVEVSALFSKYG-TIKDLQI 135
Query: 231 LKDLQSSGRNRGFAFIEYYNHACAEYSRQKMSNSNFKLENNAP--TVSWAD 279
L+ Q + ++G AF++Y A + + + N K+E ++ V WAD
Sbjct: 136 LRGSQQT--SKGCAFLKYETKEQALAALEAI-NGKHKMEGSSVPLVVKWAD 183
>Medtr4g063560.1 | RNA recognition motif, a.k.a. RRM, RBD protein |
HC | chr4:23466507-23467712 | 20130731
Length = 112
Score = 50.8 bits (120), Expect = 3e-06, Method: Composition-based stats.
Identities = 27/82 (32%), Positives = 49/82 (59%), Gaps = 1/82 (1%)
Query: 110 LLALPPHGS-EVYIGGIANNVSEEDLRVFCQSVGEVSEVRIMKAKESGEGKGYAFVAFKT 168
LL + H S +++I G++ N +E LR + G++ EV+++ +GE KGY FV F +
Sbjct: 24 LLCVRHHSSTKLFIAGLSYNTNETVLRDTFEQHGQIIEVKVICNHRTGESKGYGFVRFNS 83
Query: 169 KELASQAIEELNNSEFKGKKIK 190
+ A+ A +EL+ G++I+
Sbjct: 84 ETAAATARKELHGQIVDGRRIR 105
>Medtr5g070100.1 | RNA recognition motif (RRM) containing protein |
HC | chr5:29707444-29702897 | 20130731
Length = 393
Score = 50.1 bits (118), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 24/73 (32%), Positives = 48/73 (65%), Gaps = 2/73 (2%)
Query: 120 VYIGGIANNVSEED-LRVFCQSVGEVSEVRIMKAKESGEGKGYAFVAFKTKELASQAIEE 178
V++GGI + +E D + VF Q GEV ++ +++ K +G+ KG+AF+A++ + + A++
Sbjct: 38 VFVGGIPFDFTEGDVIAVFAQ-YGEVVDINLVRDKGTGKSKGFAFIAYEDQRSTNLAVDN 96
Query: 179 LNNSEFKGKKIKC 191
LN ++ G+ I+
Sbjct: 97 LNGAQVSGRIIRV 109
>Medtr8g092550.1 | CC1-like splicing factor | HC |
chr8:38688579-38694751 | 20130731
Length = 567
Score = 50.1 bits (118), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 46/176 (26%), Positives = 80/176 (45%), Gaps = 11/176 (6%)
Query: 200 LFIGNIPKKWTVEDMKKVVADVGPGVISIELLKDLQSSGRNRGFAFIEYYNHACA----E 255
+F +P K T D+ + + G V + L+ D ++S R++G +IE+Y+
Sbjct: 204 VFAYQMPLKATERDVYEFFSKAGK-VRDVRLIMD-RNSRRSKGVGYIEFYDAMSVPMAIA 261
Query: 256 YSRQKMSNSNFKLENNAPTVSWADPRNSESSAV-----SQVKAVYVKNLPENITQDSLKK 310
S Q + ++ + + S +AV + + +YV NL N+T+ +L++
Sbjct: 262 LSGQLLLGQPVMVKPSEAEKNLVQSNASSGAAVVGPYGAVDRKLYVGNLHFNMTEANLRE 321
Query: 311 LFEHHGKITKVVLPPAKAGQEKSRFGFVHFSDRSSAMKALKNTEKYEIDGKNLECS 366
+FE G+I V LP FGFV F+ A A K EI G+ ++ S
Sbjct: 322 IFEPFGQIEVVQLPLDMETGHCKGFGFVQFAHLEHAKAAQSLNGKLEIAGRTIKVS 377
>Medtr7g107580.2 | RNA-binding (RRM/RBD/RNP motif) family protein |
HC | chr7:43890585-43885643 | 20130731
Length = 434
Score = 50.1 bits (118), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 39/171 (22%), Positives = 84/171 (49%), Gaps = 13/171 (7%)
Query: 119 EVYIGGIANNVSEEDLRVFCQSVGEVSEVRIMKAKESGEGKGYAFVAFKTKELASQAIEE 178
++++G + +++E++L + V EV I+K K + +G FV +++ A +A+
Sbjct: 17 KLFVGQVPKHMTEDELLTLFKEFAIVDEVNIIKDKATRASRGCCFVICPSRDEADKAVNA 76
Query: 179 LNN--------SEFKGKKIKCSSSQAKHRLFIGNIPKKWTVEDMKKVVADVGPGVISIEL 230
+N S + K + +H+LFIG +PK + ++ + + G + +++
Sbjct: 77 CHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNISEVEVSALFSKYG-TIKDLQI 135
Query: 231 LKDLQSSGRNRGFAFIEYYNHACAEYSRQKMSNSNFKLENNAP--TVSWAD 279
L+ Q + + G AF++Y A + + + N K+E ++ V WAD
Sbjct: 136 LRGSQQTSK-VGCAFLKYETKEQALAALEAI-NGKHKMEGSSVPLVVKWAD 184
>Medtr7g109810.3 | flowering time control FCA-like protein | HC |
chr7:44985779-44980846 | 20130731
Length = 288
Score = 49.7 bits (117), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 44/181 (24%), Positives = 81/181 (44%), Gaps = 18/181 (9%)
Query: 119 EVYIGGIANNVSEEDLRVFCQSVGEVSEVRIMKAKESGEGKGYAFVAFKTKELASQAIEE 178
+VY+ + SE D+R+ Q G + EV +++ K +G +G V + T + A AI+
Sbjct: 75 KVYVAPVPRTASEADVRLVFQGYGTIVEVVLLRDKATGVRQGSCLVKYSTFDEADMAIKA 134
Query: 179 LNNS-EFKGKK---IKCSSSQAKHRLFIGNIPKKWTVEDMKKVVADVGPGVISIELLKD- 233
L+N F G+ + + + + R + + + D +VV V G I+ E K
Sbjct: 135 LSNQYTFPGESSPVVVRFADRKRERFGLRDFCQNMERRDPPEVVGKVYVGCINNEASKQE 194
Query: 234 ----LQSSG--------RNRGFAFIEYYNHACAEYSRQKMSNSNFKLENNAP-TVSWADP 280
G RNRG+ F+++YN A + + + + + P V +A+P
Sbjct: 195 IEEIFSPYGHIEDVVVLRNRGYGFVKFYNREMALAAIKGLDRTFTMRGCDQPLIVRFAEP 254
Query: 281 R 281
+
Sbjct: 255 K 255
>Medtr1g020080.2 | polyadenylate-binding protein RBP47C | HC |
chr1:6171590-6176186 | 20130731
Length = 309
Score = 49.3 bits (116), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 51/197 (25%), Positives = 90/197 (45%), Gaps = 24/197 (12%)
Query: 200 LFIGNIPKKWTVED-MKKVVADVGPGVISIELLKDLQSSGRNRGFAFIEYYNHACAE--- 255
L+IG++ W E + + A G + S++++++ + SG + G+ F E+++HA AE
Sbjct: 99 LWIGDL-HSWMDESYLHRCFASTGE-ITSVKVIRN-KHSGISEGYGFAEFFSHATAEKVL 155
Query: 256 --YSRQKMSNSNFKLENNAPTVSWADPRNSESSAVSQVKAVYVKNLPENITQDSLKKLFE 313
Y+ M N++ N T S D + + +S ++V +L ++T L + F
Sbjct: 156 QNYAGILMPNADQAFRLNWATFSTGDKGSDNVTDLS----IFVGDLAADVTDSVLHETFS 211
Query: 314 HHG---KITKVVLPPAKAGQEKSRFGFVHFSDRSSAMKALKNTEKYEIDGKNLECSLAKP 370
K KVV A G+ K +GFV F D S +A+ + + A P
Sbjct: 212 SSYPSVKAAKVVY-DANTGRSKG-YGFVRFGDESERSQAMTQMNGVYCSSRPMRIGAATP 269
Query: 371 ------QADQRSSGTSN 381
Q +S+GTS+
Sbjct: 270 RKSSGHQPGGQSNGTSS 286