Miyakogusa Predicted Gene

Lj1g3v4715160.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v4715160.1 Non Characterized Hit- tr|B9SRV7|B9SRV7_RICCO
Putative uncharacterized protein OS=Ricinus communis
G,70.67,2e-18,coiled-coil,NULL; seg,NULL,CUFF.32984.1
         (161 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr7g104410.1 | hypothetical protein | HC | chr7:42308114-4230...    76   2e-14
Medtr7g104410.2 | hypothetical protein | HC | chr7:42308955-4230...    76   2e-14
Medtr2g439220.1 | little zipper protein | LC | chr2:17166879-171...    58   4e-09
Medtr1g060310.1 | hypothetical protein | HC | chr1:26251256-2624...    52   2e-07
Medtr2g439240.1 | little zipper protein | HC | chr2:17171662-171...    50   1e-06

>Medtr7g104410.1 | hypothetical protein | HC |
           chr7:42308114-42309561 | 20130731
          Length = 77

 Score = 75.9 bits (185), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 40/65 (61%), Positives = 42/65 (64%), Gaps = 5/65 (7%)

Query: 90  MERLNSELYYQNCHIMKENERLRKKXXXXXXXXXXXXXXXKQKISNG-----NNAPNTTL 144
           MERLN+ELYYQNCHIMKENERLRKK               KQK+SNG      NAPN  L
Sbjct: 1   MERLNTELYYQNCHIMKENERLRKKAQILNQENQALLSQLKQKLSNGAGNSKTNAPNNML 60

Query: 145 DLNLG 149
           DLNLG
Sbjct: 61  DLNLG 65


>Medtr7g104410.2 | hypothetical protein | HC |
           chr7:42308955-42309561 | 20130731
          Length = 77

 Score = 75.9 bits (185), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 40/65 (61%), Positives = 42/65 (64%), Gaps = 5/65 (7%)

Query: 90  MERLNSELYYQNCHIMKENERLRKKXXXXXXXXXXXXXXXKQKISNG-----NNAPNTTL 144
           MERLN+ELYYQNCHIMKENERLRKK               KQK+SNG      NAPN  L
Sbjct: 1   MERLNTELYYQNCHIMKENERLRKKAQILNQENQALLSQLKQKLSNGAGNSKTNAPNNML 60

Query: 145 DLNLG 149
           DLNLG
Sbjct: 61  DLNLG 65


>Medtr2g439220.1 | little zipper protein | LC |
           chr2:17166879-17166637 | 20130731
          Length = 80

 Score = 57.8 bits (138), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 31/65 (47%), Positives = 38/65 (58%), Gaps = 5/65 (7%)

Query: 90  MERLNSELYYQNCHIMKENERLRKKXXXXXXXXXXXXXXXKQKISNG-----NNAPNTTL 144
           ME+ N ELY +NC +MKENE+LRKK               KQ+ISNG      +APN  +
Sbjct: 1   MEKSNRELYKKNCRLMKENEKLRKKVELLSEEKQTLLSQLKQQISNGASNSKTDAPNNMI 60

Query: 145 DLNLG 149
           DLNLG
Sbjct: 61  DLNLG 65


>Medtr1g060310.1 | hypothetical protein | HC |
           chr1:26251256-26249859 | 20130731
          Length = 72

 Score = 52.0 bits (123), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 28/63 (44%), Positives = 37/63 (58%), Gaps = 6/63 (9%)

Query: 90  MERLNSELYYQNCHIMKENERLRKKXXXXXXXXXXXXXXXKQKISNG------NNAPNTT 143
           ME+LNS+LY +NC+IM+ENE+LRKK               KQK+S G       N P+T 
Sbjct: 1   MEKLNSKLYLENCYIMQENEKLRKKAKLLNEENQVLLSQLKQKLSKGGSSTQNGNGPSTA 60

Query: 144 LDL 146
           L+L
Sbjct: 61  LNL 63


>Medtr2g439240.1 | little zipper protein | HC |
           chr2:17171662-17171420 | 20130731
          Length = 80

 Score = 49.7 bits (117), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 29/64 (45%), Positives = 35/64 (54%), Gaps = 5/64 (7%)

Query: 90  MERLNSELYYQNCHIMKENERLRKKXXXXXXXXXXXXXXXKQKISNG-----NNAPNTTL 144
           ME+ N ELY +NC +MKENE+LR+K               KQK SNG      NA +  L
Sbjct: 1   MEKSNRELYKKNCRLMKENEKLRRKAEFLSEEKQTLLYQLKQKFSNGASNSKTNARSNML 60

Query: 145 DLNL 148
           DLNL
Sbjct: 61  DLNL 64