Miyakogusa Predicted Gene

Lj1g3v4690380.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v4690380.1 Non Characterized Hit- tr|D8R0G4|D8R0G4_SELML
Putative uncharacterized protein OS=Selaginella
moelle,31.25,0.00000000004,seg,NULL; PH DOMAIN CONTAINING
PROTEIN,NULL; VACUOLAR PROTEIN SORTING-ASSOCIATED PROTEIN
(VPS13),Vac,gene.g37022.t1.1
         (364 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr5g013780.1 | vacuolar protein sorting protein | HC | chr5:4...   512   e-145
Medtr4g123110.1 | calcium-dependent lipid-binding-like protein |...   200   1e-51

>Medtr5g013780.1 | vacuolar protein sorting protein | HC |
           chr5:4444545-4498541 | 20130731
          Length = 4324

 Score =  512 bits (1318), Expect = e-145,   Method: Compositional matrix adjust.
 Identities = 274/417 (65%), Positives = 290/417 (69%), Gaps = 70/417 (16%)

Query: 1   MQLKPEALNALKLPVKVKAGFLGSVKLKEDIVIANADTGITYQPLVPWSRLGQDPVLVYL 60
           MQLKPEALNALKLPVKVKAGFLGSVKLK                 VPWSRLGQDPVLVYL
Sbjct: 40  MQLKPEALNALKLPVKVKAGFLGSVKLK-----------------VPWSRLGQDPVLVYL 82

Query: 61  DRIFLLAEPATQVEGCSEDAVQEAKKIRIEFLKFSL---PLSLQYGDGIETMGEVTTTKV 117
           DRIFLLAEPATQVEGCSEDAVQEAKK  I+  +  L      LQ       +G + +T +
Sbjct: 83  DRIFLLAEPATQVEGCSEDAVQEAKKSLIQETELKLWEKSQQLQSEMNKSWLGSLISTII 142

Query: 118 RN-------------------GHPFAAGVMLDKLSAVTVDDTGKETFITGGALDLIQKSV 158
            N                   GHPFAAGV LDKLSA+TVDD+GKETFITGGALD IQK V
Sbjct: 143 GNLKLSISNIHIRYEDSESNPGHPFAAGVSLDKLSAMTVDDSGKETFITGGALDRIQKCV 202

Query: 159 ELDRLAVYLDSDIIPWHASKEWEDLLPSEWFQIFKFGTKDGKPADRLLQKHSYVLEPVTG 218
           ELDRLAVYLDSDIIPWH  K WEDLLPSEWFQIF FGTKDGKPAD L QKHSY+L+PVTG
Sbjct: 203 ELDRLAVYLDSDIIPWHVDKAWEDLLPSEWFQIFSFGTKDGKPADTLSQKHSYILQPVTG 262

Query: 219 KGNYSKLLLNEVADSKQPLQKAVVNLDDVTISLSKDGYRDIMKLADNFAAFNQRLKYAHF 278
           K  YSKL  +E ADSKQPLQ AVVNLDDVTISLSKDGY D+MKLADNFA FNQRLKYAHF
Sbjct: 263 KAKYSKLHSSEAADSKQPLQTAVVNLDDVTISLSKDGYSDMMKLADNFATFNQRLKYAHF 322

Query: 279 RPPVPVKADPRSWWKYAYRAVSDQMKKAS------------------------------- 307
           RP VPV +D RSWWKYAYRAVSDQMKKAS                               
Sbjct: 323 RPLVPVNSDSRSWWKYAYRAVSDQMKKASGKMSWEQVLRYTRLQKRYISLYASLLKSDPS 382

Query: 308 QVTISGNKXXXXXXXXXXXXXXXQWRMLAHKFVEQSAEPNLSVRKQKAGNSWWSFGW 364
           QVTISGN+               QWRMLAHKFVE+SAE NL+ RKQKAGNSWWSFGW
Sbjct: 383 QVTISGNREIEDLDRELDIELILQWRMLAHKFVEKSAESNLNARKQKAGNSWWSFGW 439


>Medtr4g123110.1 | calcium-dependent lipid-binding-like protein | HC
           | chr4:50875754-50826418 | 20130731
          Length = 4257

 Score =  200 bits (509), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 119/352 (33%), Positives = 185/352 (52%), Gaps = 69/352 (19%)

Query: 1   MQLKPEALNALKLPVKVKAGFLGSVKLKEDIVIANADTGITYQPLVPWSRLGQDPVLVYL 60
           ++LK EALNALKLPV VK+GF+G++ LK                 VPW  LG++PV+V +
Sbjct: 40  LKLKSEALNALKLPVTVKSGFVGTITLK-----------------VPWKSLGKEPVIVLI 82

Query: 61  DRIFLLAEPA----------------------TQVEGCSEDAVQEAK------------- 85
           DR+F+LA PA                       + E  + DA+ ++K             
Sbjct: 83  DRVFVLANPAPDSRTIKEEDREKLFQDKLQQIEEAESATLDAISKSKLGNPSSGNSWLSS 142

Query: 86  --KIRIEFLKFSLP-LSLQYGDGIETMGEVTTTKVRNGHPFAAGVMLDKLSAVTVDDTGK 142
                I  LK S+  + ++Y D +             GHPF++GV L KL+AVT+D+ G 
Sbjct: 143 LISTIIGNLKISISNVHIRYEDSVSN----------PGHPFSSGVTLAKLAAVTMDEQGN 192

Query: 143 ETFITGGALDLIQKSVELDRLAVYLDSDIIPWHASKEWEDLLPSEWFQIFKFGTKDGKPA 202
           ETF T GALD ++KSV L+RLA+Y DSD +PW   K WED+ P EW +IF+ G  +    
Sbjct: 193 ETFDTSGALDRLRKSVHLERLALYHDSDRLPWEIDKRWEDIGPHEWIEIFEDGINEPTDY 252

Query: 203 DRLLQK----HSYVLEPVTGKGNYSKLLLNEVADSKQPLQKAVVNLDDVTISLSKDGYRD 258
            + + K     +Y++ P+     Y +L   E +D + P +K  + L DV+++L++  Y D
Sbjct: 253 HKSVSKWAVNRTYLVYPINAVLQYHRLGNQERSDPEIPFEKVSLVLSDVSLTLTEAQYHD 312

Query: 259 IMKLADNFAAFNQRLKYAHFRPPVPVKADPRSWWKYAYRAVSDQMKKASQVT 310
            +KL +  + +   ++ +H RP VP+   P  WW+YA +A   Q+K   +++
Sbjct: 313 WIKLLEAVSRYKTYMEVSHLRPSVPISRAPYLWWQYAAQATLQQLKMCYRLS 364