Miyakogusa Predicted Gene

Lj1g3v4680330.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v4680330.1 tr|A9RAU8|A9RAU8_PHYPA Predicted protein
OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_63656
,33.81,8e-17,Tudor/PWWP/MBT,NULL; PWWP,PWWP; no description,NULL;
seg,NULL,CUFF.33000.1
         (321 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr7g102410.1 | PWWP domain protein | HC | chr7:41460391-41465...   350   1e-96
Medtr3g100460.1 | PWWP domain protein | HC | chr3:46190542-46195...    65   6e-11
Medtr3g100460.3 | PWWP domain protein | HC | chr3:46190853-46195...    65   7e-11
Medtr7g113180.1 | tudor/PWWP/MBT superfamily protein | HC | chr7...    54   2e-07

>Medtr7g102410.1 | PWWP domain protein | HC | chr7:41460391-41465323
           | 20130731
          Length = 306

 Score =  350 bits (897), Expect = 1e-96,   Method: Compositional matrix adjust.
 Identities = 184/289 (63%), Positives = 208/289 (71%), Gaps = 13/289 (4%)

Query: 34  TDFSVFAXXXXXXXXXXXXXXXXXXXXVTASSLQERTSTGNLFSDDTLVRCSNYQHGKPV 93
           TDFS F                     VTA+S  ER  T   FS+D LVRC+NYQ G+PV
Sbjct: 30  TDFSFFNRIPPIESSPGSSSGEVRLSNVTANSSLERRMTVKQFSNDALVRCNNYQDGRPV 89

Query: 94  CSSESSDVPAVEVDSVVKDEGLDHSVNRDSCDEKIDIFKTLESTPRXXXXXXXXXLAVTP 153
           CSSES DV   E+DSV        S NRD+C       K  ESTPR         LAVTP
Sbjct: 90  CSSESFDVRVAELDSVY------LSGNRDACT------KMSESTPRESSVSDNSSLAVTP 137

Query: 154 GSVVWARTAGEIWWPAEIMEERPALSDPVSDGHVLVQFYGNNPSAWVDPVTDISTFEDSF 213
           G+VVWARTA ++WWPAEIMEE  ALSD V+DG+VLVQFYGN+PSAW+DP TDIS FEDSF
Sbjct: 138 GTVVWARTACQMWWPAEIMEESCALSDRVNDGNVLVQFYGNHPSAWIDPATDISIFEDSF 197

Query: 214 EERSNNPSKDFQEALKQALQRKAQLSSCRKLSPDRSAHSDQQERSSGKCTSASSSRTVDD 273
           EERSNNPS DFQ+ALKQALQRK QLSSC+ LSPDRS +S+QQ+RS+GKCTS SSSRT++D
Sbjct: 198 EERSNNPSSDFQDALKQALQRKTQLSSCQNLSPDRSTYSNQQDRSAGKCTSPSSSRTIND 257

Query: 274 -QERRRGQRKRKPKVHFDEATCSMKPEKSARRLKIMRYLGLAPPVGSPF 321
            QE+RRG+R+RKPKVHFDE T  MK E   RRLKIMRYLGLAPPVGSPF
Sbjct: 258 FQEKRRGKRERKPKVHFDEVTHPMKSETKDRRLKIMRYLGLAPPVGSPF 306


>Medtr3g100460.1 | PWWP domain protein | HC | chr3:46190542-46195079
           | 20130731
          Length = 196

 Score = 65.5 bits (158), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 50/179 (27%), Positives = 87/179 (48%), Gaps = 21/179 (11%)

Query: 154 GSVVWARTAGEIWWPAEIMEERPALSD----PVSDGHVLVQFYGNNPSAWVDPVTDISTF 209
           G ++  +  G  WWPA+++ +   L          G VLV+ YG+     V+PV   S F
Sbjct: 17  GDMIHVKLPGGSWWPAQVVNDEAILQSFQPRKCRTGEVLVRIYGSQEFLNVNPVRSCSEF 76

Query: 210 EDSFEERSNNPSKDFQEALKQALQRKAQLSSCRKLSPDRSAHSDQQERSSGKCTSASSSR 269
           E   +    N + D ++ L++ LQ+    S  +  S  +   S++ +      + + S++
Sbjct: 77  ELILK----NNNADLRKILEEGLQKDLPSSKNKPASKAKGMPSEKTD------SKSKSNK 126

Query: 270 TVDDQERRRGQRKRKPKVHFD------EATCSMK-PEKSARRLKIMRYLGLAPPVGSPF 321
            V++Q   + Q++ K     D      E T S K  E S+RR+++M+ LGL  P+GSPF
Sbjct: 127 KVEEQTPAKRQKQNKESKDGDLASPSCETTASGKLQELSSRRIRVMQSLGLVAPLGSPF 185


>Medtr3g100460.3 | PWWP domain protein | HC | chr3:46190853-46195231
           | 20130731
          Length = 215

 Score = 65.5 bits (158), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 50/179 (27%), Positives = 87/179 (48%), Gaps = 21/179 (11%)

Query: 154 GSVVWARTAGEIWWPAEIMEERPALSD----PVSDGHVLVQFYGNNPSAWVDPVTDISTF 209
           G ++  +  G  WWPA+++ +   L          G VLV+ YG+     V+PV   S F
Sbjct: 36  GDMIHVKLPGGSWWPAQVVNDEAILQSFQPRKCRTGEVLVRIYGSQEFLNVNPVRSCSEF 95

Query: 210 EDSFEERSNNPSKDFQEALKQALQRKAQLSSCRKLSPDRSAHSDQQERSSGKCTSASSSR 269
           E   +    N + D ++ L++ LQ+    S  +  S  +   S++ +      + + S++
Sbjct: 96  ELILK----NNNADLRKILEEGLQKDLPSSKNKPASKAKGMPSEKTD------SKSKSNK 145

Query: 270 TVDDQERRRGQRKRKPKVHFD------EATCSMK-PEKSARRLKIMRYLGLAPPVGSPF 321
            V++Q   + Q++ K     D      E T S K  E S+RR+++M+ LGL  P+GSPF
Sbjct: 146 KVEEQTPAKRQKQNKESKDGDLASPSCETTASGKLQELSSRRIRVMQSLGLVAPLGSPF 204


>Medtr7g113180.1 | tudor/PWWP/MBT superfamily protein | HC |
           chr7:46596764-46591846 | 20130731
          Length = 1114

 Score = 54.3 bits (129), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 29/102 (28%), Positives = 52/102 (50%), Gaps = 9/102 (8%)

Query: 154 GSVVWARTAGEIWWPAEIMEE---RPALSDPVSDGHVLVQFYGNNPSAWVDPVTDISTFE 210
           G +VW +     WWP  I  +    P++     +GHVLV F+G++   W +P  ++  FE
Sbjct: 90  GDLVWGKVKSHPWWPGHIYNQAFASPSVRRARREGHVLVAFFGDSSYGWFEP-DELIPFE 148

Query: 211 DSFEERSNNPS-----KDFQEALKQALQRKAQLSSCRKLSPD 247
            +F E+S         K  +EA+ +A +R+    +C+  +P+
Sbjct: 149 ANFAEKSQQTYSRTFVKAVEEAVDEASRRRGLGLACKCRNPN 190