Miyakogusa Predicted Gene

Lj1g3v4616540.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v4616540.1 Non Characterized Hit- tr|K3XN47|K3XN47_SETIT
Uncharacterized protein OS=Setaria italica GN=Si002987,52.17,5e-18,
,CUFF.32805.1
         (130 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr7g102930.1 | hypothetical protein | HC | chr7:41360470-4136...   213   4e-56
Medtr0050s0130.1 | hypothetical protein | HC | scaffold0050:4345...   198   1e-51

>Medtr7g102930.1 | hypothetical protein | HC |
           chr7:41360470-41363019 | 20130731
          Length = 123

 Score =  213 bits (542), Expect = 4e-56,   Method: Compositional matrix adjust.
 Identities = 99/119 (83%), Positives = 108/119 (90%)

Query: 12  SLQNDVPWRALSSSMKPVPKIHQSPVLRISQNPFSDYAISVMRHPDPIGGGFGEGAIVEA 71
           S QNDVPWRA SSS KP+PKIH SP+LR+SQNPFSDYAIS+MRHPDPIG G G+ AIVEA
Sbjct: 5   SFQNDVPWRASSSSTKPIPKIHHSPILRVSQNPFSDYAISIMRHPDPIGDGLGDDAIVEA 64

Query: 72  AGPDCIVPGQAMPIKLLGLKVWPINVDLKFLEPVGRELKQLGKFMDDAVELMNKSFIER 130
           AGP+CI+PGQ  PIKLLGLKVWPI VDLKFLEP+GRELKQLGK MDDAVELMNKSFI+R
Sbjct: 65  AGPECIIPGQVTPIKLLGLKVWPIEVDLKFLEPIGRELKQLGKVMDDAVELMNKSFIDR 123


>Medtr0050s0130.1 | hypothetical protein | HC |
           scaffold0050:43452-43826 | 20130731
          Length = 124

 Score =  198 bits (503), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 95/120 (79%), Positives = 105/120 (87%), Gaps = 1/120 (0%)

Query: 12  SLQNDVPWRALSSSMKPVPKIHQSPVLRISQNPFSDYAISVMRHPDPIGGGFGEGAIVEA 71
           S QNDVPWRA SSS KP+PKIH SP+LR+SQNPFSDYAIS+MRHPDPIG G G+ AIVEA
Sbjct: 5   SFQNDVPWRASSSSAKPIPKIHHSPILRVSQNPFSDYAISIMRHPDPIGDGLGDDAIVEA 64

Query: 72  AGPDCIVPGQAMPIKLLGLKVWPINVDLKFLEPVGRELK-QLGKFMDDAVELMNKSFIER 130
           AGP+CI+ GQ  PIKLLGLKVWPI VDLKFLEP+GRELK QLGK MDD  ELM+KSFI+R
Sbjct: 65  AGPECIIFGQVTPIKLLGLKVWPIKVDLKFLEPIGRELKQQLGKVMDDVEELMSKSFIDR 124