Miyakogusa Predicted Gene

Lj1g3v4594340.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v4594340.1 Non Characterized Hit- tr|I1JPQ7|I1JPQ7_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.49302
PE,81.48,7e-19,seg,NULL,67795_g.1
         (54 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr1g063020.1 | xyloglucan endotransglucosylase/hydrolase fami...    47   3e-06
Medtr4g057450.1 | xyloglucan endotransglucosylase/hydrolase fami...    46   9e-06

>Medtr1g063020.1 | xyloglucan endotransglucosylase/hydrolase
          family protein | HC | chr1:27686338-27683716 | 20130731
          Length = 296

 Score = 47.4 bits (111), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 22/40 (55%), Positives = 26/40 (65%)

Query: 15 SSNAXXXXXXXXXXXXKVRSLSFHKGFRNLWGPQHQRLDQ 54
          SSNA            KVRS+SF+ G+RNLWGPQHQ +DQ
Sbjct: 18 SSNAYWPPSPGYWPSSKVRSMSFYNGYRNLWGPQHQSMDQ 57


>Medtr4g057450.1 | xyloglucan endotransglucosylase/hydrolase
          family protein | HC | chr4:21085982-21083030 | 20130731
          Length = 304

 Score = 45.8 bits (107), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 21/39 (53%), Positives = 24/39 (61%)

Query: 16 SNAXXXXXXXXXXXXKVRSLSFHKGFRNLWGPQHQRLDQ 54
          SNA            K+  +SF +GFRNLWGPQHQRLDQ
Sbjct: 29 SNAQGPPSPGYYPSSKISPISFSQGFRNLWGPQHQRLDQ 67