Miyakogusa Predicted Gene

Lj1g3v4591200.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v4591200.1 Non Characterized Hit- tr|I1JPP8|I1JPP8_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.12154 PE,90.3,0,hisS:
histidine--tRNA ligase,Histidine-tRNA ligase; Class II aaRS and biotin
synthetases,NULL; Class,NODE_3595_length_1479_cov_86.826912.path2.1
         (489 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr7g101940.1 | histidyl-tRNA synthetase | HC | chr7:41153175-...   791   0.0  
Medtr1g057860.1 | histidyl-tRNA synthetase | HC | chr1:25470664-...   120   2e-27
Medtr1g057880.1 | histidine-tRNA ligase | HC | chr1:25476222-254...    51   2e-06
Medtr5g091860.1 | histidine-tRNA ligase | LC | chr5:40087568-400...    50   6e-06

>Medtr7g101940.1 | histidyl-tRNA synthetase | HC |
           chr7:41153175-41162265 | 20130731
          Length = 501

 Score =  791 bits (2043), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 393/496 (79%), Positives = 418/496 (84%), Gaps = 7/496 (1%)

Query: 1   MPATPLSSSFLTLQPRFNSYINPLFRSLTYQL-------NGNFSTVRLHSALPGAAETDS 53
           MPATP S SFL  QPRFN YINP+FRS+T+QL       N   STVR H AL  AAETDS
Sbjct: 1   MPATPFSRSFLISQPRFNHYINPIFRSVTHQLSSSPFPFNVKSSTVRFHCALSQAAETDS 60

Query: 54  PTGGRTGALTPGPSVPRDVQKIDVNPPKGTRDFPPEDMRLRNWLFNHFKEVSRLYGFEEV 113
            +GGR+GAL+P P V  +V+KIDVNPPKGTRDFPPE+MRLRNWLFN+FKEVSRLYGFEE+
Sbjct: 61  TSGGRSGALSPTPPVTGEVKKIDVNPPKGTRDFPPEEMRLRNWLFNNFKEVSRLYGFEEI 120

Query: 114 DFPVLESEALYTRKAGEEIKDQLYCFEDRGNRRVALRPELTPSLARLVIQKGKSVSLPLK 173
           DFPVLESEAL+ RKAGEEIKDQLYCFEDRGNRRVALRPELTPSLARLVIQKGKSVSLPLK
Sbjct: 121 DFPVLESEALFVRKAGEEIKDQLYCFEDRGNRRVALRPELTPSLARLVIQKGKSVSLPLK 180

Query: 174 WFTVGQCWXXXXXXXXXXXEHYQWNMDIIGVPGVMAEAELISSIVTLFKRIGITESDVGF 233
           WFTVGQCW           EHYQWNMDIIGVPGVMAEAELISSIV+ FKRIGITESDVGF
Sbjct: 181 WFTVGQCWRYERMTRGRRREHYQWNMDIIGVPGVMAEAELISSIVSFFKRIGITESDVGF 240

Query: 234 KVSSRKVLQEVLRCYSIPENLFGKVCXXXXXXXXXXXXXXXXXLKAAGLSQEAVLELLQV 293
           KVSSRKVLQEVL+CYSIPEN+FGKVC                 LKA GLSQEAV ELLQV
Sbjct: 241 KVSSRKVLQEVLKCYSIPENMFGKVCVIIDKIEKIPVDEIKKELKALGLSQEAVQELLQV 300

Query: 294 LSVKSLTELEERLGNSGEAIADLKELFSLAEKFGYSKWLQFDASVVRGLAYYTGIVFEGF 353
           LSVKSLTELEERLG SGEAIADLK+LFSLAEKFGYSKWLQ DASVVRGLAYYTGIVFEGF
Sbjct: 301 LSVKSLTELEERLGGSGEAIADLKQLFSLAEKFGYSKWLQLDASVVRGLAYYTGIVFEGF 360

Query: 354 DRQGKLRAICGGGRYDHLFSTFGADDVAACGFGFGDAXXXXXXXXXXXXXXXSMQIDDIV 413
           DR+GKLRAICGGGRYDHLFSTFGADD+ ACGFGFGDA               S+Q+ +IV
Sbjct: 361 DREGKLRAICGGGRYDHLFSTFGADDIPACGFGFGDAVIVELLREKGLLPELSLQVHNIV 420

Query: 414 CALDEDLQGYAALVANILREKGQSVDLVLESKPLKWVFKRAARTNAERLVLVGNSEWQKG 473
           CALDE+LQG AA+ ANILREKGQSVDLVLESKPLKWVFKRAARTNAERLVLVGNSEWQ+G
Sbjct: 421 CALDEELQGCAAMAANILREKGQSVDLVLESKPLKWVFKRAARTNAERLVLVGNSEWQRG 480

Query: 474 VVGVKILSTGEQYEVK 489
           +V VKILSTGEQYEVK
Sbjct: 481 MVRVKILSTGEQYEVK 496


>Medtr1g057860.1 | histidyl-tRNA synthetase | HC |
           chr1:25470664-25459007 | 20130731
          Length = 868

 Score =  120 bits (302), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 114/426 (26%), Positives = 187/426 (43%), Gaps = 25/426 (5%)

Query: 80  PKGTRDFPPEDMRLRNWLFNHFKEVSRLYGFEEVDFPVLESEALYTRKAGEEIKDQLYCF 139
           PKGTRDF  E M +R   F+  +EV   +G   +D PV E       K GE+ K  +Y  
Sbjct: 434 PKGTRDFAKEQMTIRKKAFSVIEEVFERHGATALDTPVFELRETLMGKYGEDSK-LIYDL 492

Query: 140 EDRGNRRVALRPELTPSLARLVIQKGKSVSLPLKWFTVGQCWXXXXXXXXXXXEHYQWNM 199
            D+G    +LR +LT   AR V   G +    LK + + + +           E YQ + 
Sbjct: 493 ADQGGELCSLRYDLTVPFARFVAMNGLT---SLKRYQIAKVYRRDNPSKGRYREFYQCDF 549

Query: 200 DIIGVPGVMA-EAELISSIVTLFKRIGITESDVGFKVSSRKVLQEVLRCYSIPENLFGKV 258
           DI G    MA + E++  +  L   + I + +V  K++ RK+L  +++   +P   F  +
Sbjct: 550 DIAGPAEKMAPDFEVVRILTELLDELNIGDFEV--KLNHRKLLDGMMQICGVPPEKFRTI 607

Query: 259 CXXXXXXXXXXXXXXXXXL-KAAGLSQEAVLELLQVLSVKS-----LTELEER----LGN 308
           C                 + +  GL+ E    +   +  K      L++L++     L N
Sbjct: 608 CSSIDKLDKQSFEQIRKEMVEEKGLTAETADRIGTFVKEKGHPLTLLSKLKQEGSAFLEN 667

Query: 309 SG--EAIADLKELFSLAEKFGYSKWLQFDASVVRGLAYYTGIVFEGFDRQG-KLRAICGG 365
           +G  +A+ DL+ LF   +K      + FD S+ RGL YYTG++FE   + G ++ +I  G
Sbjct: 668 AGSVDALNDLEILFRALDKSKRLDKVVFDLSLARGLDYYTGVIFEAVFKGGAQVGSIAAG 727

Query: 366 GRYDHLFSTFGADDVAACGFGFGDA---XXXXXXXXXXXXXXXSMQIDDIVCALDEDLQG 422
           GRYD+L   FG+  V A G   G                      + + +V  L  D+  
Sbjct: 728 GRYDNLIGMFGSKQVPAVGVSLGIERVFAIMEQQQKDQNQMARPTKTEVLVSILGNDVT- 786

Query: 423 YAALVANILREKGQSVDLVLESKPLKWVFKRAARTNAERLVLVGNSEWQKGVVGVKILST 482
            A  +A  L + G   + ++  +  K  F  A  +    ++LVG  E ++G V +K L +
Sbjct: 787 LAGELAGELWDAGVKAEFLVNKRRPKH-FDYAKESRIPWMILVGEQEIKEGTVQLKSLES 845

Query: 483 GEQYEV 488
           G    +
Sbjct: 846 GNDVNI 851


>Medtr1g057880.1 | histidine-tRNA ligase | HC |
           chr1:25476222-25474368 | 20130731
          Length = 128

 Score = 51.2 bits (121), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 25/56 (44%), Positives = 34/56 (60%), Gaps = 1/56 (1%)

Query: 334 FDASVVRGLAYYTGIVFEGFDRQG-KLRAICGGGRYDHLFSTFGADDVAACGFGFG 388
           FD S+ RGL YYTG++FE   + G ++ +I  GGRYD+L   FG+    A G   G
Sbjct: 49  FDLSLARGLDYYTGVIFEAVFKGGVEVGSIAAGGRYDNLIGMFGSKQGPAVGVSLG 104


>Medtr5g091860.1 | histidine-tRNA ligase | LC |
           chr5:40087568-40086835 | 20130731
          Length = 173

 Score = 49.7 bits (117), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 29/73 (39%), Positives = 43/73 (58%), Gaps = 3/73 (4%)

Query: 306 LGNSG--EAIADLKELFSLAEKFGYSKWLQFDASVVRGLAYYTGIVFEGFDRQG-KLRAI 362
           L N+G  +A+ DL+ LF   +       + FD S+ RGL YYTG++FE   + G ++ +I
Sbjct: 51  LENAGSVDALNDLEILFKALDNSNRLDKVVFDLSLARGLDYYTGVIFEAVFKGGAQVGSI 110

Query: 363 CGGGRYDHLFSTF 375
             GGRYD+L   F
Sbjct: 111 AAGGRYDNLIGMF 123