Miyakogusa Predicted Gene

Lj1g3v4590910.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v4590910.1 Non Characterized Hit- tr|H9W5N9|H9W5N9_PINTA
Uncharacterized protein (Fragment) OS=Pinus taeda
GN=0,33.1,0.00000000000001,coiled-coil,NULL; seg,NULL,CUFF.32781.1
         (463 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr7g101730.1 | transmembrane protein, putative | HC | chr7:41...   440   e-123

>Medtr7g101730.1 | transmembrane protein, putative | HC |
           chr7:41004286-41007171 | 20130731
          Length = 583

 Score =  440 bits (1132), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 259/491 (52%), Positives = 303/491 (61%), Gaps = 33/491 (6%)

Query: 1   MSDDLIPPRLLNLRSTSHLLKEATXXXXXXXXXXXXXXXXXXXXRTVVENGTSHVTSFIX 60
           MSD L   RL N+RST+ LLK+AT                    RTVVENGTS   SF+ 
Sbjct: 1   MSDQL---RLHNVRSTAQLLKQATSSFTSNLFTFLFLSLLIFSFRTVVENGTSRFISFVD 57

Query: 61  XXXXXXXXXXXXXXXGNGNGXXXXXXXXXXXXXXXXXXX------FLHLTRVGTXXXXXX 114
                          GN                            FLHLTRVGT      
Sbjct: 58  GDPSVKSLLSRLDLAGNAVNAANYQHRQRSSQFHPSPAALRRRRPFLHLTRVGTLDDDFF 117

Query: 115 XXXXXXXXXXXXXXPKPPLNATLLALGPFR----FSDPVADDGVRVSGVVRPGTTFKAEG 170
                          K P+N +++  GPF     FSD VAD+G+RV  +VR G T K E 
Sbjct: 118 SGDDDDGRTLFGSNSKAPVNGSVVDFGPFSLDSGFSDLVADNGIRVFQIVRSGITLKTED 177

Query: 171 LDGDNHXXXXXXXXXXMK-------------------NGLGNGQEME-KGVDLRFFVKGL 210
            + +             +                   + +GNG+E + K VD + FV G+
Sbjct: 178 SEIEVEKNENDDKDIDDEKDKTKEKEVEDEEGKKKEKSDMGNGKEEKVKSVDFQIFVNGI 237

Query: 211 EVGHRDAAALFFLVSFLSAAYGWVILVFLVTYSWVLGVVFVAVVNDLVGRFSSVTGLVWD 270
           E+  RD    F L+  LS AYGWVI+VFLVTYS VLGVV V+VVNDLVGRFSS TG+VWD
Sbjct: 238 EISRRDTTLFFVLLGSLSVAYGWVIMVFLVTYSCVLGVVVVSVVNDLVGRFSSTTGVVWD 297

Query: 271 GSRLGLKRLSGFILMRWAVRDALTQLLGLWYFGEIEDQYSFFKLFVRLKLMPFSVMSPWV 330
           G +LGLKR+S  +L+RWAVRDA+TQL+G+WYF EIEDQ+SFFKLFVRLKLMPFSVMSPWV
Sbjct: 298 GFQLGLKRISAVVLIRWAVRDAVTQLVGIWYFSEIEDQFSFFKLFVRLKLMPFSVMSPWV 357

Query: 331 RGFEKEISGFLFTWFLVDTFVAFIFAVDAWVAIVDSRRSGREIVKEGCYLISTMFNQAIQ 390
            GFEKEISGFL TWFL+DTFV FIF+VD WVA+ D RR  +EIVKEGCYL+S+MF  A  
Sbjct: 358 TGFEKEISGFLVTWFLMDTFVTFIFSVDFWVALEDFRRGSKEIVKEGCYLLSSMFYHAFL 417

Query: 391 IKCLEAVLCGSFVRWGLSRICGRTFAKMFQSTMEVYFMVTWLVFYFAARCRDANLQGRRF 450
           IKCLEAVLCGS +RW L+RICG+ FAKMFQSTMEVYFMV WLVFYF A+ RDAN QGRRF
Sbjct: 418 IKCLEAVLCGSLMRWFLARICGKVFAKMFQSTMEVYFMVAWLVFYFVAKSRDANQQGRRF 477

Query: 451 GQRELEGLIDG 461
           GQRE+EGLIDG
Sbjct: 478 GQREIEGLIDG 488