Miyakogusa Predicted Gene
- Lj1g3v4579500.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj1g3v4579500.1 Non Characterized Hit- tr|A5C1G7|A5C1G7_VITVI
Putative uncharacterized protein OS=Vitis vinifera
GN=,60.76,1e-18,coiled-coil,NULL; seg,NULL; VACUOLAR ATP SYNTHASE
SUBUNIT G PLANT,NULL; VACUOLAR ATP SYNTHASE SUBUNI,CUFF.32763.1
(110 letters)
Database: Medicago_aa4.0v1
62,319 sequences; 21,947,249 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Medtr7g101170.1 | vacuolar (H+)-ATPase G subunit | HC | chr7:408... 157 2e-39
Medtr7g101170.2 | vacuolar (H+)-ATPase G subunit | HC | chr7:408... 157 2e-39
Medtr1g064540.4 | vacuolar (H+)-ATPase G subunit | HC | chr1:283... 157 2e-39
Medtr1g064540.1 | vacuolar (H+)-ATPase G subunit | HC | chr1:283... 157 2e-39
Medtr1g064540.2 | vacuolar (H+)-ATPase G subunit | HC | chr1:283... 157 2e-39
Medtr1g064540.3 | vacuolar (H+)-ATPase G subunit | HC | chr1:283... 127 3e-30
Medtr7g007770.1 | vacuolar (H+)-ATPase G subunit | HC | chr7:165... 110 4e-25
>Medtr7g101170.1 | vacuolar (H+)-ATPase G subunit | HC |
chr7:40825733-40823239 | 20130731
Length = 110
Score = 157 bits (397), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 81/110 (73%), Positives = 88/110 (80%)
Query: 1 MASNRGQGGIXXXXXXXXXXXRIVNAAKNEKLARLKQAKEEAEKDIAEYRAHLEHEFQKK 60
MASN GQGGI IVNAAKNEK ARLKQAKEEAEK+I ++RAHLE++FQ K
Sbjct: 1 MASNSGQGGIQQLLAAEQEAQHIVNAAKNEKYARLKQAKEEAEKEITKHRAHLENQFQNK 60
Query: 61 VSASSGDSGANVKRLEQETDAKIQHLKTEAGRISQDVVAMLLKYVTTVKN 110
V+ASSGDSGANVKRLEQETD KI LKTEA RIS DVV+ LLKYVTTVKN
Sbjct: 61 VTASSGDSGANVKRLEQETDTKIHQLKTEASRISGDVVSTLLKYVTTVKN 110
>Medtr7g101170.2 | vacuolar (H+)-ATPase G subunit | HC |
chr7:40825722-40823239 | 20130731
Length = 110
Score = 157 bits (397), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 81/110 (73%), Positives = 88/110 (80%)
Query: 1 MASNRGQGGIXXXXXXXXXXXRIVNAAKNEKLARLKQAKEEAEKDIAEYRAHLEHEFQKK 60
MASN GQGGI IVNAAKNEK ARLKQAKEEAEK+I ++RAHLE++FQ K
Sbjct: 1 MASNSGQGGIQQLLAAEQEAQHIVNAAKNEKYARLKQAKEEAEKEITKHRAHLENQFQNK 60
Query: 61 VSASSGDSGANVKRLEQETDAKIQHLKTEAGRISQDVVAMLLKYVTTVKN 110
V+ASSGDSGANVKRLEQETD KI LKTEA RIS DVV+ LLKYVTTVKN
Sbjct: 61 VTASSGDSGANVKRLEQETDTKIHQLKTEASRISGDVVSTLLKYVTTVKN 110
>Medtr1g064540.4 | vacuolar (H+)-ATPase G subunit | HC |
chr1:28387925-28390993 | 20130731
Length = 112
Score = 157 bits (396), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 83/107 (77%), Positives = 87/107 (81%)
Query: 3 SNRGQGGIXXXXXXXXXXXRIVNAAKNEKLARLKQAKEEAEKDIAEYRAHLEHEFQKKVS 62
SNRGQGGI RIVNAAKNEK ARLKQAKEEAEK+IA YRA LE EFQKKVS
Sbjct: 5 SNRGQGGIQQLLAAEQEAQRIVNAAKNEKSARLKQAKEEAEKEIAAYRAKLEAEFQKKVS 64
Query: 63 ASSGDSGANVKRLEQETDAKIQHLKTEAGRISQDVVAMLLKYVTTVK 109
SSGDSGANVKRL+QET+ KI HLKTEA RIS DVVAMLLK+VTTVK
Sbjct: 65 DSSGDSGANVKRLDQETEEKIHHLKTEADRISDDVVAMLLKHVTTVK 111
>Medtr1g064540.1 | vacuolar (H+)-ATPase G subunit | HC |
chr1:28387910-28390999 | 20130731
Length = 112
Score = 157 bits (396), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 83/107 (77%), Positives = 87/107 (81%)
Query: 3 SNRGQGGIXXXXXXXXXXXRIVNAAKNEKLARLKQAKEEAEKDIAEYRAHLEHEFQKKVS 62
SNRGQGGI RIVNAAKNEK ARLKQAKEEAEK+IA YRA LE EFQKKVS
Sbjct: 5 SNRGQGGIQQLLAAEQEAQRIVNAAKNEKSARLKQAKEEAEKEIAAYRAKLEAEFQKKVS 64
Query: 63 ASSGDSGANVKRLEQETDAKIQHLKTEAGRISQDVVAMLLKYVTTVK 109
SSGDSGANVKRL+QET+ KI HLKTEA RIS DVVAMLLK+VTTVK
Sbjct: 65 DSSGDSGANVKRLDQETEEKIHHLKTEADRISDDVVAMLLKHVTTVK 111
>Medtr1g064540.2 | vacuolar (H+)-ATPase G subunit | HC |
chr1:28387925-28390993 | 20130731
Length = 112
Score = 157 bits (396), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 83/107 (77%), Positives = 87/107 (81%)
Query: 3 SNRGQGGIXXXXXXXXXXXRIVNAAKNEKLARLKQAKEEAEKDIAEYRAHLEHEFQKKVS 62
SNRGQGGI RIVNAAKNEK ARLKQAKEEAEK+IA YRA LE EFQKKVS
Sbjct: 5 SNRGQGGIQQLLAAEQEAQRIVNAAKNEKSARLKQAKEEAEKEIAAYRAKLEAEFQKKVS 64
Query: 63 ASSGDSGANVKRLEQETDAKIQHLKTEAGRISQDVVAMLLKYVTTVK 109
SSGDSGANVKRL+QET+ KI HLKTEA RIS DVVAMLLK+VTTVK
Sbjct: 65 DSSGDSGANVKRLDQETEEKIHHLKTEADRISDDVVAMLLKHVTTVK 111
>Medtr1g064540.3 | vacuolar (H+)-ATPase G subunit | HC |
chr1:28387925-28390993 | 20130731
Length = 90
Score = 127 bits (318), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 67/80 (83%), Positives = 71/80 (88%)
Query: 30 EKLARLKQAKEEAEKDIAEYRAHLEHEFQKKVSASSGDSGANVKRLEQETDAKIQHLKTE 89
EK ARLKQAKEEAEK+IA YRA LE EFQKKVS SSGDSGANVKRL+QET+ KI HLKTE
Sbjct: 10 EKSARLKQAKEEAEKEIAAYRAKLEAEFQKKVSDSSGDSGANVKRLDQETEEKIHHLKTE 69
Query: 90 AGRISQDVVAMLLKYVTTVK 109
A RIS DVVAMLLK+VTTVK
Sbjct: 70 ADRISDDVVAMLLKHVTTVK 89
>Medtr7g007770.1 | vacuolar (H+)-ATPase G subunit | HC |
chr7:1654327-1657893 | 20130731
Length = 151
Score = 110 bits (274), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 54/109 (49%), Positives = 74/109 (67%)
Query: 1 MASNRGQGGIXXXXXXXXXXXRIVNAAKNEKLARLKQAKEEAEKDIAEYRAHLEHEFQKK 60
M +GQGGI IV+ A+N + RLKQAK+EAE++ A+YR+H+E E+QK
Sbjct: 42 MDPFKGQGGIQMLLTAEQEAQHIVSNARNLRTQRLKQAKDEAEREAAQYRSHMEEEYQKS 101
Query: 61 VSASSGDSGANVKRLEQETDAKIQHLKTEAGRISQDVVAMLLKYVTTVK 109
++ ++G SG NVKRL+QETD KI LK ++S +VV MLLKYVT +K
Sbjct: 102 LTETTGSSGLNVKRLDQETDTKIGDLKQSGSKVSTEVVDMLLKYVTNIK 150