Miyakogusa Predicted Gene
- Lj1g3v4579480.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj1g3v4579480.1 CUFF.32748.1
(457 letters)
Database: Medicago_aa4.0v1
62,319 sequences; 21,947,249 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Medtr7g101130.1 | peptide upstream ORF protein, putative | HC | ... 659 0.0
Medtr1g064690.1 | peptide upstream ORF protein, putative | HC | ... 389 e-108
Medtr7g070530.1 | methyltransferase domain protein | HC | chr7:2... 129 8e-30
Medtr4g013290.1 | methyltransferase domain protein | HC | chr4:3... 124 2e-28
Medtr3g031200.1 | methyltransferase | HC | chr3:26958395-2695691... 119 5e-27
Medtr4g093860.1 | transmembrane protein, putative | HC | chr4:37... 77 3e-14
Medtr3g100550.1 | peptide upstream ORF protein | LC | chr3:46246... 75 1e-13
Medtr5g065970.1 | transmembrane protein, putative | HC | chr5:27... 69 1e-11
>Medtr7g101130.1 | peptide upstream ORF protein, putative | HC |
chr7:40805732-40807403 | 20130731
Length = 468
Score = 659 bits (1701), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 328/469 (69%), Positives = 379/469 (80%), Gaps = 13/469 (2%)
Query: 1 METKTLKFQILNGSIARRVFLRSIVLASAITMVTLLRAPVIFDLGTLVLNLGS----ENA 56
M+TK L FQILNGS RR+F RSIVLA+ I+M+ LLRA +DL + NL EN
Sbjct: 1 MDTKILNFQILNGSTIRRLFFRSIVLAATISMIALLRALSNYDLESFASNLNCFAYLENN 60
Query: 57 TAVSPGSYLFKTRFWGSGNCEKDFNLTVNVVNELMGKQFLVDCGAESLCIGEGSSMAVTA 116
+P SY F+ R WGS NCEKD NLTVNVV ELMGKQFL +C A +LC+GEGSSMAV A
Sbjct: 61 VTSNPTSYFFQNRIWGSMNCEKDVNLTVNVVTELMGKQFL-NCEANTLCVGEGSSMAVKA 119
Query: 117 MKQLGFSSVRGVSTHRFFSLKQRKFVFELDYEDSSFDFVLSRDMDKVSVPALLVLEAERV 176
MKQLGFS+V GV T+RFFSLK + V+ELDY+DSSFDFVLSRD+DKVSVPALLVLE ERV
Sbjct: 120 MKQLGFSTVSGVYTNRFFSLKMKNIVYELDYQDSSFDFVLSRDLDKVSVPALLVLEVERV 179
Query: 177 LKPGGIGALLVSSTGSHPNDLIRSATPXXXXXXXXXXXXXXXFSE-LNLVVFKKRSENVS 235
LKP GIGALLV + SH NDLIRSATP + LNLVVFKKRSEN +
Sbjct: 180 LKPNGIGALLVRAKSSHHNDLIRSATPVSSLLRSSSVVHVDSVDDDLNLVVFKKRSENAT 239
Query: 236 SFYQHG---LPADCPSLTLTKPLIDLMEPILGEKPPPESEIKINYLPKFVDVSTRKRLVY 292
+F+ H LPADCPSLTLTKPLIDLMEP++ EKP + + ++YLPKFVDVSTRKRLVY
Sbjct: 240 TFFNHNQYSLPADCPSLTLTKPLIDLMEPLVSEKPYITTPMPVSYLPKFVDVSTRKRLVY 299
Query: 293 IDIGVGEFLNANVSDWFLPSYPIDQKAFNVYFVHYNTSMLLSYVKRPGVTFVYHPGLAGE 352
IDIGVGE LNANVSDWF+PSYPIDQKAFNVYFVHYNTS++LSYVKRPG+TFVYHPGLAG+
Sbjct: 300 IDIGVGELLNANVSDWFIPSYPIDQKAFNVYFVHYNTSIMLSYVKRPGITFVYHPGLAGK 359
Query: 353 VSEAYATDGD--LDPYLGEDEFDFVAWFKETVQYADFVVLKMNAGKVELKFLSDIFETGA 410
V++A GD LDP++GE+EFDF+AWFKETVQYADFVVLKMNAG+VELKFLSD+F++GA
Sbjct: 360 VADAADNVGDEQLDPFVGEEEFDFLAWFKETVQYADFVVLKMNAGEVELKFLSDVFDSGA 419
Query: 411 ICFVDELFLRCPEKGNYDKT--MTKKESCIDLYKGLRSNGVYVHQWWGD 457
ICFVDELFLRCPEK + DKT +TKKE+C+++Y LRS+GVYVHQ WGD
Sbjct: 420 ICFVDELFLRCPEKEDGDKTNALTKKENCMEIYTSLRSSGVYVHQLWGD 468
>Medtr1g064690.1 | peptide upstream ORF protein, putative | HC |
chr1:28472706-28470800 | 20130731
Length = 477
Score = 389 bits (1000), Expect = e-108, Method: Compositional matrix adjust.
Identities = 231/482 (47%), Positives = 314/482 (65%), Gaps = 47/482 (9%)
Query: 3 TKTLKFQILNGSIARRVFLRSIVLASAITMVTLLR-------APVIFDLGTLVLNLGSEN 55
+K +FQI GS+AR +F ++++LASAI++V+LL AP +D ++ ++
Sbjct: 5 SKCSRFQIPLGSMARSMFFKALLLASAISIVSLLHLLPSMDLAPKTYD-HDCIIEFEEDS 63
Query: 56 ATAVSPGSYLFKTR----FWGSGN---CEKDFNLTVNVVNELMGKQFLVDCGAESLCIGE 108
++PGSYLF++R FWGS + C+K+ NL ++V EL G++ L++ AE+LCIGE
Sbjct: 64 NLTLTPGSYLFQSRVLNSFWGSFDSLSCKKEINLVSSIVKELKGER-LLNFEAETLCIGE 122
Query: 109 GSSMAVTAMKQLGFSSVRGVSTHRFFSLKQRKFVFELDYE-DSSFDFVLSRDMDKVSVPA 167
S++AV+ +K+LGF++V HR FS ++ FV+ LD+ D SFDFVLS+D+ KV+VPA
Sbjct: 123 TSNIAVSTLKKLGFTNVIN---HRVFSFNKKNFVYSLDHHHDESFDFVLSKDLGKVAVPA 179
Query: 168 LLVLEAERVLKPGGIGALLVSSTGSHPNDLIRSATPXXXXXXXXXXXXXXXFSELNLVVF 227
L+VLE ER+LKP GIGALL+ + ++IR A+P + LVVF
Sbjct: 180 LVVLEVERILKPNGIGALLLDFDDNDNINMIRYASPISALLRNSSIVHVSLVNNHGLVVF 239
Query: 228 KKRSE--------NVSS-FYQHGLPADCPSLTLTKPLIDLMEPILGEKPPPESEIKINYL 278
KK+SE N SS FY LP DC S+ K ++L+EP L ++ P + K YL
Sbjct: 240 KKKSESKSETESENRSSLFYHQVLPEDCKSVNFAKQFMNLIEPPLAKETPYQE--KTTYL 297
Query: 279 PKFVDVST-RKRLVYIDIGVGEFLNANVSDWFLPSYPIDQKAFNVYFVHYNTSMLLSYVK 337
PKF DVS+ +K LVY++I E V DWF SYPI +K FNVYFVHYNTS++LS+VK
Sbjct: 298 PKFKDVSSSKKNLVYVNIVEDE-----VGDWFPQSYPIHKKDFNVYFVHYNTSIMLSHVK 352
Query: 338 RPGVTFVYHPGLAGEVS-EAYATDGDLDPYLGED-EFDFVAWFKETVQYADFVVLKMN-A 394
P VTFVYHP L EA G+ D + ED EFD VAWFKETV+ ADFV++KMN A
Sbjct: 353 GPRVTFVYHPELNENFKDEAKVNVGEAD--VKEDEEFDLVAWFKETVENADFVMVKMNIA 410
Query: 395 GKVELKFLSDIFETGAICFVDELFLRCPEKGNYDKTMTKKESCIDLYKGLRSNGVYVHQW 454
GKVE+KFLS+I++ G ICFVDELFL C E + ++E C+D+YKGLRSNGV+VHQW
Sbjct: 411 GKVEMKFLSEIYKNGVICFVDELFLSCSESED-----GERERCMDIYKGLRSNGVFVHQW 465
Query: 455 WG 456
W
Sbjct: 466 WN 467
>Medtr7g070530.1 | methyltransferase domain protein | HC |
chr7:26047730-26045559 | 20130731
Length = 509
Score = 129 bits (323), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 109/422 (25%), Positives = 175/422 (41%), Gaps = 58/422 (13%)
Query: 85 NVVNELMGKQFLVDCGAESLCIGEGSSMAVTAMKQLGFSSVRGVSTHRFFSLKQRKFVFE 144
+V +L+G +L ++SLC+ + V A++++G + G++ L +
Sbjct: 95 SVFRDLIGGGYLTT-ESKSLCVETVTGRDVFALREVGVKNAVGIARKSVKPLVKSGSGER 153
Query: 145 LDYEDSSFDFVLSRD--MDKVSVPALLVLEAERVLKPGGIGALLVSSTGSHPN-----DL 197
+ + D FDFV S + K + PA+ E R +K GG ++ + DL
Sbjct: 154 IPFGDGEFDFVFSGEGSFRKSAKPAVFAAEIARTMKHGGFAVFHFTNRKDTYSFNSFLDL 213
Query: 198 IRSATPXXXXXXXXXXXXXXXFSELNLVVFKKRSENVSSFYQHGLPADCPSLTLTKPLID 257
E L E S Y +C K L+
Sbjct: 214 FHCFKVVKLHVLEGFDSSMPYIHETVLKNECVDYEKFDSDYYSSSNGNCYVPGYKKDLVR 273
Query: 258 LMEPILGEKP-PPESEIK-----INYLPKFVDVSTRKRLVYIDIGVGEFLNANVSDWFLP 311
+ EP++ ++P P +K I YL VD+S + R +Y+D+G + +++ WF
Sbjct: 274 IAEPLIEKEPLKPWITLKRNLMNIKYLSSMVDISFKNRYLYVDVGARSY-GSSIGSWFRK 332
Query: 312 SYPIDQKAFNVYFVHYNTSMLLSYVKRPGVTFVYHPGLAGEVSEAYATDGDLDP------ 365
YP K F+VY + + Y + G+T V P A +E A + DP
Sbjct: 333 QYPKQNKTFHVYAIEADKHFHKEYGLKKGLTLV--PYAAWVKNETLAFEIHRDPGEHVEV 390
Query: 366 -----------------YLGEDE----FDFVAWFKETVQYADFVVLKMNAGKVELKFLSD 404
+ GE E FDF W K+TV DFVV+KM+ E +
Sbjct: 391 KGRGMGRIQPLRSIGKGFDGEVEKIKGFDFANWLKKTVSKNDFVVMKMDVEGTEFDLIPR 450
Query: 405 IFETGAICFVDELFLRC-----------PEKGNYDKTMTKKESCIDLYKGLRSNGVYVHQ 453
+F+TGAIC +DE+FL C Y+KT + C++L+ LR +G+ VHQ
Sbjct: 451 LFKTGAICLIDEIFLECHYNRWQRCCPGQRSSKYEKTY---DQCLELFNSLRQSGILVHQ 507
Query: 454 WW 455
W+
Sbjct: 508 WF 509
>Medtr4g013290.1 | methyltransferase domain protein | HC |
chr4:3695664-3697901 | 20130731
Length = 509
Score = 124 bits (311), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 108/406 (26%), Positives = 166/406 (40%), Gaps = 61/406 (15%)
Query: 101 AESLCIGEGSSMAVTAMKQLGFSSVRGVSTHRFFSLKQRKFVFELDYEDSSFDFVLSRD- 159
++LC+ + V A+K++G G+S L + ++ + ++SFDFV S D
Sbjct: 114 TKALCVDTPTGRDVFALKEIGVVDSVGISKKAMKPLVKSGVGHKIPFGNNSFDFVFSGDG 173
Query: 160 -MDKVSVPALLVLEAERVLKPGGIGALLVSSTGSHPN----DLIRSATPXXXXXXXXXXX 214
+++ E R LKP G V + + DL +
Sbjct: 174 GLERSVKGFEFAKEIARTLKPEGFAVFHVKAKDDYSYNSFVDLFKFCC--KVIKFNDIQG 231
Query: 215 XXXXFSELNLVVFKKRS-ENVSSFYQHGLPADCPSLTLTKPLIDLMEPILGEKP-PPESE 272
E+ +V KK N+ S L C + L+ E ++ E+P P
Sbjct: 232 FDESMPEIREIVVKKIGYGNIDS--DMNLNKKCSVAGYKQELVKNAEELIEEEPLKPWIT 289
Query: 273 IK-----INYLPKFVDVSTRKRLVYIDIGVGEFLNANVSDWFLPSYPIDQKAFNVYFVHY 327
+K I Y VD+S + R VY+D+G + +++ WF YP K F+VY +
Sbjct: 290 LKKNVKNIKYASSMVDISFKSRYVYVDVGARSY-GSSIGSWFKKQYPKQNKTFDVYAIEA 348
Query: 328 NTSMLLSYVKRPGVTFVYHPGLAGEVSEAYATDGDLDPYLGEDE---------------- 371
+ YV + GVT + P A +E+ + + DP + E
Sbjct: 349 DKHFHQEYVMKKGVTLL--PYAAWVRNESLVFEINNDPGDKKTEKVGRGMGRIQPLDSQG 406
Query: 372 -----------FDFVAWFKETVQYADFVVLKMNAGKVELKFLSDIFETGAICFVDELFLR 420
FDF W K TV DFVV+KM+ E + +FETGAIC VDE+FL
Sbjct: 407 GGGGGVDTIQGFDFAEWLKHTVTMNDFVVMKMDVEGTEFDLIPRLFETGAICLVDEIFLE 466
Query: 421 C-----------PEKGNYDKTMTKKESCIDLYKGLRSNGVYVHQWW 455
C Y+KT + C+ L+ LR +GV VHQW+
Sbjct: 467 CHYNRWQRCCPGQRSPKYEKTY---DQCLQLFNSLRQSGVLVHQWF 509
>Medtr3g031200.1 | methyltransferase | HC | chr3:26958395-26956911 |
20130731
Length = 494
Score = 119 bits (299), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 125/505 (24%), Positives = 205/505 (40%), Gaps = 77/505 (15%)
Query: 15 IARRVFLRSIVLA--SAITMVTLLRAPVIFDLGTLVLN-----LGSENATAVSPGSYLFK 67
+A+ FLR+I++ S ++ +R +I + N + SEN +P
Sbjct: 1 MAKHGFLRNILVRIFSFAVLIFAVRFAIIVTIHGESCNSSDFCIFSENLNLTAPSHLSTS 60
Query: 68 TRFWGSGNCEKDFNLTVNVVNELMGKQFLVDCGAESLCIGEGSSMAVTAMKQLGFSSVRG 127
+ N + ++ +L+G+ L+ +++LCI + V A+K++G G
Sbjct: 61 GDPFSGKNWRRSVEHYASIFQDLIGEGSLLP-NSKALCIDTPTGEDVLALKEIGVVDSVG 119
Query: 128 V----STHRFFSLKQRKFVFELDYEDSSFDFVLSRD--MDKVSVPALLVLEAERVLKPGG 181
+ S + RK F D SFDF S + +++ PA L E R L+PGG
Sbjct: 120 IFKKPSPPLIIQGEGRKHPFPGD----SFDFEFSGNGRLEESVKPAELAGEICRTLRPGG 175
Query: 182 IGALLVSSTGSHPNDLIRSATPXXXXXXXXXXXXXXXFSELNLVVFKKRSENVSSFYQHG 241
A+ ++ S+ + + L +++ KK + +
Sbjct: 176 FIAVHTTARDSYSFNSFLELFNCCEFIRTREINGVDSSTILEILMKKKILQKFKTLDFGV 235
Query: 242 LPADCPSLTLTKPLI--------DLMEPILGEKP-PPESEIK-----INYLPKFVDVSTR 287
P++ ++ K LI + E ++ E+P P +K I YL VD+S +
Sbjct: 236 SPSNGNYHSVNKCLIPRYKREIVNNAESLILEEPLKPWIALKRNLKNIKYLTSMVDISFK 295
Query: 288 KRLVYIDIGVGEFLNANVSDWFLPSYPIDQKAFNVYFVHYNTSMLLSYVKRPGVTFVYHP 347
VY+DIG + +++ WF YP K F VY + + + Y + GV + +
Sbjct: 296 SNYVYVDIGARSY-GSSIGSWFKKQYPKQNKTFEVYAIEADKAFHQEYRTKKGVNLLPYA 354
Query: 348 ---------------------------GLAGEVSEAYATDGDLDPYLGEDEFDFVAWFKE 380
G V + + GD D LG FDF W K
Sbjct: 355 AWVRNETLFFEITRDPSKKMMMKGRGMGRINPVQTSASHMGDKDKILG---FDFAEWLKS 411
Query: 381 TVQYADFVVLKMNAGKVELKFLSDIFETGAICFVDELFLRC-----------PEKGNYDK 429
V DFVVLKM+ E + + +TGAIC +DELFL C + K
Sbjct: 412 VVTSKDFVVLKMDVEGTEFHLIPRLIQTGAICLIDELFLECHYNRWQRCCPGQRSAKFQK 471
Query: 430 TMTKKESCIDLYKGLRSNGVYVHQW 454
T ++ C+DL+ LR+ GV VHQW
Sbjct: 472 TYSQ---CLDLFTSLRNIGVLVHQW 493
>Medtr4g093860.1 | transmembrane protein, putative | HC |
chr4:37205961-37204481 | 20130731
Length = 389
Score = 77.4 bits (189), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 59/207 (28%), Positives = 89/207 (42%), Gaps = 51/207 (24%)
Query: 258 LMEPILGEKPPPESEIKINYLPKFVDVSTR--KRLVYIDIGVGEFLNANVSDWFLPSYPI 315
L+EP + +KI YLP+ + S KR V++ +G+ + A V +WF +YP
Sbjct: 226 LLEPPRQDSAKSNKNLKIKYLPELLGDSLDGYKRRVFVGVGLRDENKAAV-EWFERNYPK 284
Query: 316 DQKAFNVYFVHYNTSMLLSYVKRPGVTFVYHPGLAGEVSEAYATDGDLDPYLGEDEFDFV 375
F ++ + + P V + D
Sbjct: 285 KSTKFEIHNLQVAP-------EEPNVP----------------------------QTDVS 309
Query: 376 AWFKETVQYADFVVLKMNAGKVELKFLSDIFETGAICFVDELFLRCPEKGNYDKTMTKKE 435
AW + V+ ++VV+K A VE ++ IC VDELFL+C + +T T+K+
Sbjct: 310 AWLSKHVKADEYVVMKAEADVVE-----EMMRKKTICLVDELFLQC--NNQWWQTGTRKK 362
Query: 436 S------CIDLYKGLRSNGVYVHQWWG 456
S C+DLY LR GV VHQWWG
Sbjct: 363 SGRAYWQCLDLYGRLRDEGVAVHQWWG 389
>Medtr3g100550.1 | peptide upstream ORF protein | LC |
chr3:46246113-46244690 | 20130731
Length = 419
Score = 75.5 bits (184), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 74/321 (23%), Positives = 124/321 (38%), Gaps = 61/321 (19%)
Query: 149 DSSFDFVLSRDMDKVSVPALLVLEAERVLKPGGIGALLVSSTGSHPNDLIRSATPXXXXX 208
D++ DF+++ + + S ERVLK GI +L+++ T
Sbjct: 147 DNTVDFIITTNFPEASRFI------ERVLKTEGIVTVLINNNNP--------TTSFYKLP 192
Query: 209 XXXXXXXXXXFSELNLVVFKKRSENVSSFYQHGLP-------ADCPSLTLTKPLIDLMEP 261
F + +V KK + ++ H P +D + L L+EP
Sbjct: 193 KNYKIVYVRQFDSV-VVAMKKSATAINVKRNHAAPRKLFGYASDAKKIALQNLEDVLLEP 251
Query: 262 ILGEKPPPESEIK-INYLPKFV--DVSTRKRLVYIDIGVGEFLNANVSDWFLPSYPIDQK 318
+K YLP + + + R V+ID+G+ E + +DWF +YP K
Sbjct: 252 PRAASGKSRKYLKRTRYLPDLMGDSLESYTRRVFIDVGLPEKEGGSGTDWFSKNYPTRNK 311
Query: 319 AFNVYFVHYNTSMLLSYVKRPGVTFVYHPGLAGEVSEAYATDGDLDPYLGEDEFDFVAWF 378
F +Y + ++E ++ + +G + W
Sbjct: 312 NFEMYKIETRV-----------------------MTEEESSRKEASSKIGMSD-----WL 343
Query: 379 KETVQYADFVVLKMNAGKVELKFLSDIFETGAICFVDELFLRCPEKGNY---DKTMTKKE 435
+ V+ ++VV+K A VE ++ + I VDELFL C + + +K
Sbjct: 344 NKNVKEEEYVVMKAEAEVVE-----EMMRSNNIGLVDELFLECKPRHGFKIENKNRRAYW 398
Query: 436 SCIDLYKGLRSNGVYVHQWWG 456
C+ LY LR GV VHQWWG
Sbjct: 399 ECLALYGKLRDEGVAVHQWWG 419
>Medtr5g065970.1 | transmembrane protein, putative | HC |
chr5:27789153-27790764 | 20130731
Length = 419
Score = 68.9 bits (167), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 51/189 (26%), Positives = 78/189 (41%), Gaps = 46/189 (24%)
Query: 274 KINYLPKFV--DVSTRKRLVYIDIGVGEFLNANVSDWFLPSYPIDQKAFNVYFVHYNTSM 331
+ YLP + + + R V+ID+G+ + + +DWF +YP K F +Y +
Sbjct: 271 RTKYLPDLMGDTLESYPRRVFIDVGLPQKDGGSGTDWFSKNYPTRNKNFEMYKIE----- 325
Query: 332 LLSYVKRPGVTFVYHPGLAGEVSEAYATDGDLDPYLGEDEFDFVAWFKETVQYADFVVLK 391
V E T + + W + V+ ++VV+K
Sbjct: 326 --------------------TVVEGSPTT----------QVEMSDWLMKNVKDEEYVVMK 355
Query: 392 MNAGKVELKFLSDIFETGAICFVDELFLRCPEKGNYDKTMTKKE----SCIDLYKGLRSN 447
A VE ++ + +I VDELFL C +G K T+ C+ LY LR
Sbjct: 356 AEAEVVE-----EMMRSKSIMLVDELFLECKPQGLNLKRGTRGRRAYWECLALYGKLRDE 410
Query: 448 GVYVHQWWG 456
GV VHQWWG
Sbjct: 411 GVAVHQWWG 419