Miyakogusa Predicted Gene

Lj1g3v4579450.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v4579450.1 Non Characterized Hit- tr|A5BK87|A5BK87_VITVI
Putative uncharacterized protein OS=Vitis vinifera
GN=,63.38,0.000000000000004,seg,NULL; WD-REPEAT DMWD-RELATED,NULL; WD
REPEAT PROTEIN,NULL,CUFF.32754.1
         (200 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr7g101110.3 | transducin/WD-like repeat-protein | HC | chr7:...   140   1e-33
Medtr7g101110.1 | transducin/WD-like repeat-protein | HC | chr7:...   140   1e-33
Medtr7g101110.4 | transducin/WD-like repeat-protein | HC | chr7:...   139   2e-33
Medtr7g101110.2 | transducin/WD-like repeat-protein | HC | chr7:...   139   2e-33

>Medtr7g101110.3 | transducin/WD-like repeat-protein | HC |
           chr7:40795168-40801958 | 20130731
          Length = 561

 Score =  140 bits (352), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 77/142 (54%), Positives = 85/142 (59%), Gaps = 1/142 (0%)

Query: 26  GLKTYFKTPEGRYKLQYEKTHPSGLLHYAHGKTVTQVTLAHLKDKXXXXXXXXXXXXXXX 85
           GLKTYFKTPEGRYKLQ++KTHPSGLL + HGKTV+ VTLAHLK+K               
Sbjct: 31  GLKTYFKTPEGRYKLQFDKTHPSGLLQFNHGKTVSMVTLAHLKEK-PAPLTPTASSSSFS 89

Query: 86  XXXXXXXXXXXLLGGSNGSRALSFVXXXXXXXXXXXXXXXXXXXXXXXXXXVANPNFDGK 145
                      LLGGSNG+RALSFV                          VANPNFDGK
Sbjct: 90  ASSGVRSAAARLLGGSNGNRALSFVGGNGSSKSNGGASRIGSIGSSSLSSSVANPNFDGK 149

Query: 146 GTYLIFNVGDAIFISDLNSQDK 167
           G+YL+FN GDAI ISDLNSQDK
Sbjct: 150 GSYLVFNAGDAILISDLNSQDK 171


>Medtr7g101110.1 | transducin/WD-like repeat-protein | HC |
           chr7:40795188-40801958 | 20130731
          Length = 561

 Score =  140 bits (352), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 77/142 (54%), Positives = 85/142 (59%), Gaps = 1/142 (0%)

Query: 26  GLKTYFKTPEGRYKLQYEKTHPSGLLHYAHGKTVTQVTLAHLKDKXXXXXXXXXXXXXXX 85
           GLKTYFKTPEGRYKLQ++KTHPSGLL + HGKTV+ VTLAHLK+K               
Sbjct: 31  GLKTYFKTPEGRYKLQFDKTHPSGLLQFNHGKTVSMVTLAHLKEK-PAPLTPTASSSSFS 89

Query: 86  XXXXXXXXXXXLLGGSNGSRALSFVXXXXXXXXXXXXXXXXXXXXXXXXXXVANPNFDGK 145
                      LLGGSNG+RALSFV                          VANPNFDGK
Sbjct: 90  ASSGVRSAAARLLGGSNGNRALSFVGGNGSSKSNGGASRIGSIGSSSLSSSVANPNFDGK 149

Query: 146 GTYLIFNVGDAIFISDLNSQDK 167
           G+YL+FN GDAI ISDLNSQDK
Sbjct: 150 GSYLVFNAGDAILISDLNSQDK 171


>Medtr7g101110.4 | transducin/WD-like repeat-protein | HC |
           chr7:40795188-40801958 | 20130731
          Length = 446

 Score =  139 bits (349), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 77/142 (54%), Positives = 85/142 (59%), Gaps = 1/142 (0%)

Query: 26  GLKTYFKTPEGRYKLQYEKTHPSGLLHYAHGKTVTQVTLAHLKDKXXXXXXXXXXXXXXX 85
           GLKTYFKTPEGRYKLQ++KTHPSGLL + HGKTV+ VTLAHLK+K               
Sbjct: 31  GLKTYFKTPEGRYKLQFDKTHPSGLLQFNHGKTVSMVTLAHLKEK-PAPLTPTASSSSFS 89

Query: 86  XXXXXXXXXXXLLGGSNGSRALSFVXXXXXXXXXXXXXXXXXXXXXXXXXXVANPNFDGK 145
                      LLGGSNG+RALSFV                          VANPNFDGK
Sbjct: 90  ASSGVRSAAARLLGGSNGNRALSFVGGNGSSKSNGGASRIGSIGSSSLSSSVANPNFDGK 149

Query: 146 GTYLIFNVGDAIFISDLNSQDK 167
           G+YL+FN GDAI ISDLNSQDK
Sbjct: 150 GSYLVFNAGDAILISDLNSQDK 171


>Medtr7g101110.2 | transducin/WD-like repeat-protein | HC |
           chr7:40795179-40801958 | 20130731
          Length = 446

 Score =  139 bits (349), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 77/142 (54%), Positives = 85/142 (59%), Gaps = 1/142 (0%)

Query: 26  GLKTYFKTPEGRYKLQYEKTHPSGLLHYAHGKTVTQVTLAHLKDKXXXXXXXXXXXXXXX 85
           GLKTYFKTPEGRYKLQ++KTHPSGLL + HGKTV+ VTLAHLK+K               
Sbjct: 31  GLKTYFKTPEGRYKLQFDKTHPSGLLQFNHGKTVSMVTLAHLKEK-PAPLTPTASSSSFS 89

Query: 86  XXXXXXXXXXXLLGGSNGSRALSFVXXXXXXXXXXXXXXXXXXXXXXXXXXVANPNFDGK 145
                      LLGGSNG+RALSFV                          VANPNFDGK
Sbjct: 90  ASSGVRSAAARLLGGSNGNRALSFVGGNGSSKSNGGASRIGSIGSSSLSSSVANPNFDGK 149

Query: 146 GTYLIFNVGDAIFISDLNSQDK 167
           G+YL+FN GDAI ISDLNSQDK
Sbjct: 150 GSYLVFNAGDAILISDLNSQDK 171