Miyakogusa Predicted Gene

Lj1g3v4579230.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v4579230.1 Non Characterized Hit- tr|Q6XD29|Q6XD29_GOSBA
Putative uncharacterized protein (Fragment)
OS=Gossypi,79.17,0.00000000002,SUBFAMILY NOT NAMED,NULL; FAMILY NOT
NAMED,NULL; PLAC8,Uncharacterised protein family Cys-rich;
seg,,CUFF.32730.1
         (234 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr7g100870.1 | cell number regulator-like protein | HC | chr7...   347   4e-96
Medtr5g008240.1 | plant cadmium resistance protein | HC | chr5:1...    67   2e-11
Medtr5g008240.7 | plant cadmium resistance protein | HC | chr5:1...    67   2e-11
Medtr5g008240.4 | plant cadmium resistance protein | HC | chr5:1...    66   3e-11
Medtr5g008240.2 | plant cadmium resistance protein | HC | chr5:1...    65   6e-11
Medtr7g044840.1 | cell number regulator-like protein | HC | chr7...    48   8e-06

>Medtr7g100870.1 | cell number regulator-like protein | HC |
           chr7:40651120-40655069 | 20130731
          Length = 231

 Score =  347 bits (891), Expect = 4e-96,   Method: Compositional matrix adjust.
 Identities = 166/197 (84%), Positives = 175/197 (88%)

Query: 38  QDFLLGWTADGHPVPHGSVVGQPMSRSPWNSSICACLGQNDDFCSSDLEVCLLGSVAPCV 97
           QD  LGWTADG P+ HGSV+GQP+ RSPWNSS CACLGQND FCSSDLEVCLLGSVAPCV
Sbjct: 35  QDRYLGWTADGLPISHGSVMGQPIPRSPWNSSACACLGQNDHFCSSDLEVCLLGSVAPCV 94

Query: 98  LYGSNVERLGSTPGTFVNHCLPYSGLYVIGNSCFGWNCLAPLFSYPSRTALRRRFNLEGS 157
           LYGSN+ERL S PGTF NHCL YSGLYVIGNSCFGWNCLAP  SY SRT +RRRFNLEGS
Sbjct: 95  LYGSNMERLHSNPGTFGNHCLHYSGLYVIGNSCFGWNCLAPWLSYHSRTEIRRRFNLEGS 154

Query: 158 CEALNRSCGCCGSFMEDEAQREQCESACDLATHVFCHVCALCQEGRELRRRLPHPGFNAQ 217
           CEALNRSCGCCGS++E+E QRE  E ACD ATHVFCHVCALCQEGRELRRR+PHPGFNAQ
Sbjct: 155 CEALNRSCGCCGSYLENEEQREHYELACDFATHVFCHVCALCQEGRELRRRVPHPGFNAQ 214

Query: 218 PVLVMIPPGEQAMGRAA 234
           PVLVMIPPGEQ MGR A
Sbjct: 215 PVLVMIPPGEQTMGRGA 231


>Medtr5g008240.1 | plant cadmium resistance protein | HC |
           chr5:1712186-1715254 | 20130731
          Length = 186

 Score = 66.6 bits (161), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 57/203 (28%), Positives = 81/203 (39%), Gaps = 58/203 (28%)

Query: 51  VPHGSVVGQPMSRSP-------------WNSSICACLGQNDDFCSSDLEVCLLGSVAPCV 97
           +P G    + MS SP             W+S ICAC          D++ C +G + PC 
Sbjct: 13  IPLGQSDSEAMSLSPLHHGGSSSNVSNQWSSGICACF--------DDMQSCCIGCLCPCY 64

Query: 98  LYGSNVERLGSTPGTFVNHCLPYSGLYVIGNS--CFGWN--------CLAPLFSYPSRTA 147
           L+G N E LGS  GTF+  C+ +  L+ + N+  C   +        CL   ++   R  
Sbjct: 65  LFGKNAEFLGS--GTFMGSCVTHFILWSLVNTACCLLTDGLFLGLPGCLVSCYACGYRNT 122

Query: 148 LRRRFNLEGSCEALNRSCGCCGSFMEDEAQREQCESACDLATHVFCHVCALCQEGRELRR 207
           LR ++NL          CG                   D  TH  CH+CA+CQE RE+  
Sbjct: 123 LRSKYNLP------EAPCG-------------------DFVTHFCCHLCAICQEYREICE 157

Query: 208 RLPHPGFNAQPVLVMIPPGEQAM 230
           R          + V+  P  Q M
Sbjct: 158 RAGDSEATDMKLAVVTAPPVQTM 180


>Medtr5g008240.7 | plant cadmium resistance protein | HC |
           chr5:1711828-1715252 | 20130731
          Length = 186

 Score = 66.6 bits (161), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 57/203 (28%), Positives = 81/203 (39%), Gaps = 58/203 (28%)

Query: 51  VPHGSVVGQPMSRSP-------------WNSSICACLGQNDDFCSSDLEVCLLGSVAPCV 97
           +P G    + MS SP             W+S ICAC          D++ C +G + PC 
Sbjct: 13  IPLGQSDSEAMSLSPLHHGGSSSNVSNQWSSGICACF--------DDMQSCCIGCLCPCY 64

Query: 98  LYGSNVERLGSTPGTFVNHCLPYSGLYVIGNS--CFGWN--------CLAPLFSYPSRTA 147
           L+G N E LGS  GTF+  C+ +  L+ + N+  C   +        CL   ++   R  
Sbjct: 65  LFGKNAEFLGS--GTFMGSCVTHFILWSLVNTACCLLTDGLFLGLPGCLVSCYACGYRNT 122

Query: 148 LRRRFNLEGSCEALNRSCGCCGSFMEDEAQREQCESACDLATHVFCHVCALCQEGRELRR 207
           LR ++NL          CG                   D  TH  CH+CA+CQE RE+  
Sbjct: 123 LRSKYNLP------EAPCG-------------------DFVTHFCCHLCAICQEYREICE 157

Query: 208 RLPHPGFNAQPVLVMIPPGEQAM 230
           R          + V+  P  Q M
Sbjct: 158 RAGDSEATDMKLAVVTAPPVQTM 180


>Medtr5g008240.4 | plant cadmium resistance protein | HC |
           chr5:1712186-1715254 | 20130731
          Length = 252

 Score = 66.2 bits (160), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 57/203 (28%), Positives = 82/203 (40%), Gaps = 58/203 (28%)

Query: 51  VPHGSVVGQPMSRSP-------------WNSSICACLGQNDDFCSSDLEVCLLGSVAPCV 97
           +P G    + MS SP             W+S ICAC          D++ C +G + PC 
Sbjct: 79  IPLGQSDSEAMSLSPLHHGGSSSNVSNQWSSGICACF--------DDMQSCCIGCLCPCY 130

Query: 98  LYGSNVERLGSTPGTFVNHCLPYSGLYVIGNS--CFGWN--------CLAPLFSYPSRTA 147
           L+G N E LGS  GTF+  C+ +  L+ + N+  C   +        CL   ++   R  
Sbjct: 131 LFGKNAEFLGS--GTFMGSCVTHFILWSLVNTACCLLTDGLFLGLPGCLVSCYACGYRNT 188

Query: 148 LRRRFNLEGSCEALNRSCGCCGSFMEDEAQREQCESACDLATHVFCHVCALCQEGRELRR 207
           LR ++NL  +       CG                   D  TH  CH+CA+CQE RE+  
Sbjct: 189 LRSKYNLPEA------PCG-------------------DFVTHFCCHLCAICQEYREICE 223

Query: 208 RLPHPGFNAQPVLVMIPPGEQAM 230
           R          + V+  P  Q M
Sbjct: 224 RAGDSEATDMKLAVVTAPPVQTM 246


>Medtr5g008240.2 | plant cadmium resistance protein | HC |
           chr5:1712186-1715254 | 20130731
          Length = 228

 Score = 65.1 bits (157), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 57/203 (28%), Positives = 82/203 (40%), Gaps = 58/203 (28%)

Query: 51  VPHGSVVGQPMSRSP-------------WNSSICACLGQNDDFCSSDLEVCLLGSVAPCV 97
           +P G    + MS SP             W+S ICAC          D++ C +G + PC 
Sbjct: 55  IPLGQSDSEAMSLSPLHHGGSSSNVSNQWSSGICACF--------DDMQSCCIGCLCPCY 106

Query: 98  LYGSNVERLGSTPGTFVNHCLPYSGLYVIGNS--CFGWN--------CLAPLFSYPSRTA 147
           L+G N E LGS  GTF+  C+ +  L+ + N+  C   +        CL   ++   R  
Sbjct: 107 LFGKNAEFLGS--GTFMGSCVTHFILWSLVNTACCLLTDGLFLGLPGCLVSCYACGYRNT 164

Query: 148 LRRRFNLEGSCEALNRSCGCCGSFMEDEAQREQCESACDLATHVFCHVCALCQEGRELRR 207
           LR ++NL  +       CG                   D  TH  CH+CA+CQE RE+  
Sbjct: 165 LRSKYNLPEA------PCG-------------------DFVTHFCCHLCAICQEYREICE 199

Query: 208 RLPHPGFNAQPVLVMIPPGEQAM 230
           R          + V+  P  Q M
Sbjct: 200 RAGDSEATDMKLAVVTAPPVQTM 222


>Medtr7g044840.1 | cell number regulator-like protein | HC |
           chr7:15078855-15075792 | 20130731
          Length = 240

 Score = 47.8 bits (112), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 45/174 (25%), Positives = 67/174 (38%), Gaps = 20/174 (11%)

Query: 59  QPMSRSPWNSSICACLGQNDDFCSSDLEVCLLGSVAPCVLYGSNVERLGS-TPGTF--VN 115
           QP +   W + IC C+         D + C  G   PCV YG N+E +    P T   V 
Sbjct: 53  QPPADEDWTTGICGCV--------EDTDSCWTGLFCPCVQYGRNIEAINDDIPWTNGCVC 104

Query: 116 HCLPYSGLYVIGNSCFGWNCLAPLFSYPSRTALRRRFNLEGSCEALNRSCGCCGSFMEDE 175
           H +   G   +  +   +N + P  S+     L   + + G    L R        ++D 
Sbjct: 105 HAICVEGGMALAVATAFFNGIDPETSFLIAEGLFFSWWMCGIYTGLFRQSLQKKYHLKD- 163

Query: 176 AQREQCESACD-LATHVFCHVCALCQEGRELRRRLPHPGFNAQPVLVMIPPGEQ 228
                  S CD    H   H CA+CQE RE++  L     N    +   PP ++
Sbjct: 164 -------SPCDPCMVHCCLHWCAICQEHREMKNHLSSDNTNTDGTITNPPPVQE 210