Miyakogusa Predicted Gene

Lj1g3v4578900.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v4578900.1 tr|A9U207|A9U207_PHYPA Predicted protein
OS=Physcomitrella patens subsp. patens
GN=PHYPADRAFT_154541,33.15,2e-18,Thioredoxin-like,Thioredoxin-like
fold; no description,Thioredoxin-like fold;
AhpC-TSA_2,NULL,CUFF.32695.1
         (256 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr7g100540.1 | thioredoxin-like protein AAED1 | HC | chr7:404...   409   e-114
Medtr4g097500.1 | thioredoxin-like protein | HC | chr4:40173229-...    90   2e-18
Medtr0328s0040.1 | AhpC/TSA antioxidant enzyme | HC | scaffold03...    67   2e-11

>Medtr7g100540.1 | thioredoxin-like protein AAED1 | HC |
           chr7:40482104-40485013 | 20130731
          Length = 251

 Score =  409 bits (1051), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 205/258 (79%), Positives = 222/258 (86%), Gaps = 9/258 (3%)

Query: 1   MACSPSTTLFLSNSPLHLNKNTNQFPLQAFPTLSLNQNLQLYSKNLLNLSTNRHHATTLP 60
           MACS   T  LSNS  HLN+ TN+  L  +PTLSLNQN  +YS N L L      +TT+P
Sbjct: 1   MACS---TTLLSNS-FHLNQLTNKCKLHVYPTLSLNQNFPIYSNNPLKL---HPVSTTIP 53

Query: 61  --SASAGVESPVLSEDTTGSLDSVKVFDLNGNGIPISDLWKDRKAVVAFARHFGCVLCRK 118
             S SAGV+SPVL +DT+ SL+ VKVFDL GNGIPISDLWKDRKAVVAFARHFGCVLCRK
Sbjct: 54  FASGSAGVKSPVLGDDTSSSLELVKVFDLEGNGIPISDLWKDRKAVVAFARHFGCVLCRK 113

Query: 119 RADYLAAKKDLMDASGVALVLIGPGSVDQAKAFAEQTKFGGEIYADPTHSSYEALNFVSG 178
           RADYLA+KKD+MDASGVALVLIGPG++DQAKAFAEQTKF GEIYADP  SSYEAL FVSG
Sbjct: 114 RADYLASKKDIMDASGVALVLIGPGNIDQAKAFAEQTKFKGEIYADPAQSSYEALKFVSG 173

Query: 179 VLTTFTPNAGLKIIQLYMEGYRQDWKLSFEKDTVSRGGWKQGGIIVAGPGKNNISYLHKD 238
           VLTTFTP AGLKII+LYMEGYRQDWKLSFEKDTVSRGGW+QGGIIVAGPGK NISY+HKD
Sbjct: 174 VLTTFTPKAGLKIIELYMEGYRQDWKLSFEKDTVSRGGWQQGGIIVAGPGKGNISYIHKD 233

Query: 239 KEAGDDPEIEDILKACCS 256
           KEAGDDPEIEDILKACCS
Sbjct: 234 KEAGDDPEIEDILKACCS 251


>Medtr4g097500.1 | thioredoxin-like protein | HC |
           chr4:40173229-40178424 | 20130731
          Length = 251

 Score = 90.1 bits (222), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 58/191 (30%), Positives = 88/191 (46%), Gaps = 8/191 (4%)

Query: 68  SPVLSEDTTGSLDSVKVFDLNGNGIPISDLWKDRK--AVVAFARHFGCVLCRKRADYLAA 125
           SP ++E+    L  V +F   G  +   DLW   +  AVVA  RHFGC  C + A  L  
Sbjct: 61  SPTVAEN----LGDVSIFTAAGESVLFKDLWDQEQGIAVVALLRHFGCPCCWELASTLKE 116

Query: 126 KKDLMDASGVALVLIGPGSVDQAKAFAEQTKFGGE-IYADPTHSSYEALNFVSGVLTTFT 184
            K   DA+GV L+ +G G+ ++A+  AE+  F  + +YADP   +Y   +   G   TF 
Sbjct: 117 SKSRFDAAGVKLIAVGVGAPNKARILAERLPFPMDCLYADPDRKAYNFFDLYYGFGRTFF 176

Query: 185 PNAGLKIIQLYMEGYRQDWKLSFEKDTVSRGGWKQGGIIVAGPGKNNISYLHKDKEAGDD 244
             A   ++  +    +     + E     R G  Q G +    GK  + Y  KD+  GD 
Sbjct: 177 NPASASVLSRFDALQKAVKNYTIEATPDDRSGVLQQGGMFVFRGK-ELLYARKDEGTGDH 235

Query: 245 PEIEDILKACC 255
             ++D+   CC
Sbjct: 236 APLDDVFDVCC 246


>Medtr0328s0040.1 | AhpC/TSA antioxidant enzyme | HC |
           scaffold0328:15405-12609 | 20130731
          Length = 423

 Score = 66.6 bits (161), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 46/169 (27%), Positives = 82/169 (48%), Gaps = 21/169 (12%)

Query: 95  SDLWKDRKAVVAFARHFGCVLCRKRADYLAAKKDLMDASGVALVLIGPGSVD-QAKAFAE 153
           S+LW+D+ AV    R  GC++CR  A  L ++K + D+ G  L  +    ++ + K F  
Sbjct: 238 SELWRDKPAVFLCLRRPGCIMCRAEAHQLYSRKPIFDSLGFQLFAVLHEEIESEVKDFWP 297

Query: 154 QTKFGGEIYADPTHSSYEAL--------NFVSGVLTTFTPNAGLKIIQLYMEGYRQDWKL 205
           +  +GG +  D +   Y+AL        NF+SG L    P A        +  Y++   +
Sbjct: 298 RY-WGGVVLLDRSRDFYKALGGGKLPKENFISGFL--LNPRA--------LSNYKRSKTM 346

Query: 206 SFEKDTVSRGGWKQGGIIVAGPGKNNISYLHKDKEAGDDPEIEDILKAC 254
           + E +    G  K GG+ + G GK+ I+Y   ++  GD   + ++++ C
Sbjct: 347 NIEYNFKGEGEIK-GGLFIIGNGKSGIAYQFIERNFGDWAPVAEVIEIC 394