Miyakogusa Predicted Gene

Lj1g3v4578720.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v4578720.1 tr|I0YSF8|I0YSF8_9CHLO Alternative oxidase
OS=Coccomyxa subellipsoidea C-169 PE=3
SV=1,26.61,0.00000001,seg,NULL,CUFF.32676.1
         (216 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr7g100150.1 | transmembrane protein, putative | HC | chr7:40...   270   9e-73
Medtr1g067320.1 | transmembrane protein, putative | HC | chr1:29...   209   2e-54
Medtr7g100150.2 | transmembrane protein, putative | HC | chr7:40...   202   2e-52

>Medtr7g100150.1 | transmembrane protein, putative | HC |
           chr7:40370933-40373498 | 20130731
          Length = 226

 Score =  270 bits (689), Expect = 9e-73,   Method: Compositional matrix adjust.
 Identities = 123/192 (64%), Positives = 139/192 (72%)

Query: 25  PGXXXXXXXXXXXXEIFTTHEWLRATPSVYFRCTGDNKTVLPDIKKPHVLYTFKGEESWQ 84
           PG            EIFTTHEWLR TPSVYFRC+GDNKT+LPD+KK HVLY FKGEESWQ
Sbjct: 27  PGLVLSAVVTLSSIEIFTTHEWLRPTPSVYFRCSGDNKTILPDVKKKHVLYAFKGEESWQ 86

Query: 85  PLTDFPSKKCKRCGLYEKDPILSDDVFDEWELCPSDFAAPDGKYSLFKEKEFNATFLCPE 144
           PLT+F ++KCKRCG YEKD +LSDD FDEWELCPSDF APDGKY  FKEKE NA+F+CPE
Sbjct: 87  PLTEFTARKCKRCGFYEKDSVLSDDEFDEWELCPSDFTAPDGKYVHFKEKELNASFICPE 146

Query: 145 CLTLPGVAVPAPEGNRDKKGMNXXXXXXXXXXXXXXXXXXMMGAYKYWQKKKREQDQARF 204
           CL+     + A +GN   KGMN                   +G YKYWQK+KREQDQARF
Sbjct: 147 CLSFSNDTISASDGNHKGKGMNVGVIVLLTVLVSTVLIAGAVGTYKYWQKRKREQDQARF 206

Query: 205 LKLFEEGDDLED 216
           LKLF+EGDD+ED
Sbjct: 207 LKLFDEGDDIED 218


>Medtr1g067320.1 | transmembrane protein, putative | HC |
           chr1:29006937-29010395 | 20130731
          Length = 214

 Score =  209 bits (531), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 95/196 (48%), Positives = 123/196 (62%), Gaps = 6/196 (3%)

Query: 21  FTNSPGXXXXXXXXXXXXEIFTTHEWLRATPSVYFRCTGDNKTVLPDIKKPHVLYTFKGE 80
           F N PG            EIF  HEWL+ T +VYF C G+NK V  D+K+   +Y + G+
Sbjct: 16  FANFPGLMLCAVVSLSSIEIFERHEWLKVTSTVYFLCEGENKNVFEDVKRARFVYAYNGQ 75

Query: 81  ESWQPLTDFPSKKCKRCGLYEKDPILSDDVFDEWELCPSDFAAPDGKYSLFKEKEFNATF 140
           +SW+ L++F SK CKRCGLYE++ I SDD FDEWE CPSDF AP G+Y  FKEK+FNATF
Sbjct: 76  QSWKILSNFSSKNCKRCGLYEENSITSDDAFDEWEFCPSDFTAPHGEYVRFKEKQFNATF 135

Query: 141 LCPECLTLPGVAVPAPEGNRDKKGMNXXXXXXXXXXXXXXXXXXMMGAYKYWQKKKREQD 200
           LCP+CL+           + DK+G +                  + GAYK+W KK++E+D
Sbjct: 136 LCPDCLSF------GASSSSDKRGKHIAILVFLGALAAGVLILGVFGAYKFWLKKRKEED 189

Query: 201 QARFLKLFEEGDDLED 216
           QA FLKLFE+GDD+ED
Sbjct: 190 QAHFLKLFEDGDDIED 205


>Medtr7g100150.2 | transmembrane protein, putative | HC |
           chr7:40370984-40373346 | 20130731
          Length = 189

 Score =  202 bits (514), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 90/124 (72%), Positives = 100/124 (80%)

Query: 25  PGXXXXXXXXXXXXEIFTTHEWLRATPSVYFRCTGDNKTVLPDIKKPHVLYTFKGEESWQ 84
           PG            EIFTTHEWLR TPSVYFRC+GDNKT+LPD+KK HVLY FKGEESWQ
Sbjct: 27  PGLVLSAVVTLSSIEIFTTHEWLRPTPSVYFRCSGDNKTILPDVKKKHVLYAFKGEESWQ 86

Query: 85  PLTDFPSKKCKRCGLYEKDPILSDDVFDEWELCPSDFAAPDGKYSLFKEKEFNATFLCPE 144
           PLT+F ++KCKRCG YEKD +LSDD FDEWELCPSDF APDGKY  FKEKE NA+F+CPE
Sbjct: 87  PLTEFTARKCKRCGFYEKDSVLSDDEFDEWELCPSDFTAPDGKYVHFKEKELNASFICPE 146

Query: 145 CLTL 148
           CL+ 
Sbjct: 147 CLSF 150