Miyakogusa Predicted Gene

Lj1g3v4554430.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v4554430.1 tr|I1LYU9|I1LYU9_SOYBN Arginine biosynthesis
bifunctional protein ArgJ, chloroplastic OS=Glycine
max,88.44,0,ARGININE BIOSYNTHESIS BIFUNCTIONAL PROTEIN ARGJ,Arginine
biosynthesis protein ArgJ;
Q9ZUR7_ARATH_Q9Z,NODE_49882_length_1691_cov_21.382023.path1.1
         (460 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr1g068845.1 | arginine biosynthesis protein ArgJ | HC | chr1...   745   0.0  

>Medtr1g068845.1 | arginine biosynthesis protein ArgJ | HC |
           chr1:29434869-29427365 | 20130731
          Length = 470

 Score =  745 bits (1923), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 376/472 (79%), Positives = 400/472 (84%), Gaps = 14/472 (2%)

Query: 1   MYSCVVVPHPIFLH-----KTSLNPK--IFTS--MRIRAMS---NQPSTYIPAAPIFLPE 48
           MYSC+  PH + LH      TS N K  +F S  ++IRA+S   NQ STYIPAAPIFLP+
Sbjct: 1   MYSCI--PHNVSLHFHFSTTTSPNSKSTMFASRNLKIRAVSTTENQASTYIPAAPIFLPQ 58

Query: 49  GPWNQIPGGVTAAEGFKAAGMYGGLRAVGEKPDLALVTCDVDAVSAGSFTTNVVAAAPVL 108
           GPW QIPGGVTAAEGFKAAG+YGGLRAVGEKPDLALVTCDVDA+SAGSFTTNVVAAAPVL
Sbjct: 59  GPWKQIPGGVTAAEGFKAAGIYGGLRAVGEKPDLALVTCDVDAISAGSFTTNVVAAAPVL 118

Query: 109 YCKKTLDISNTARAVLTNAGQANAATGEAGYQDVIECVDSLAKLLKMKPEEVLVESTGVI 168
           YCK TLDISNTARAVLTNAGQANAATGEAGY+D+IECV+SLAKLL +KPEEVL+ESTGVI
Sbjct: 119 YCKSTLDISNTARAVLTNAGQANAATGEAGYRDMIECVESLAKLLGVKPEEVLIESTGVI 178

Query: 169 GQRIKKGALLNSLPMLVNSLSSSVEGADSAAVAITTTDLVSKSVAIESLVGGTKVRVGGM 228
           GQRIKKGALLNSLP+LVNSL+SS EGADSAAVAITTTDLVSKSVAIESLVG TKVR+GGM
Sbjct: 179 GQRIKKGALLNSLPLLVNSLTSSDEGADSAAVAITTTDLVSKSVAIESLVGRTKVRIGGM 238

Query: 229 AKGSGMIHPNMATMLGVITTDARVTSDVWRKMVKIAVNRSFNQITVDGDTSTNDTVXXXX 288
           AKGSGMIHPNMATMLGVITTDA VTSDVWRKMV++AVNRSFNQITVDGDTSTNDTV    
Sbjct: 239 AKGSGMIHPNMATMLGVITTDAGVTSDVWRKMVQVAVNRSFNQITVDGDTSTNDTVIALA 298

Query: 289 XXXXXXXXXXXXXXXEAIQLQACLDAVMQGLAKSIAWDGEGATCLIEVTVTGANXXXXXX 348
                          EAIQLQACLDAVMQGLAKSIAWDGEGATCLIEV+VTGAN      
Sbjct: 299 SGLSGLSCISSLDSDEAIQLQACLDAVMQGLAKSIAWDGEGATCLIEVSVTGANSEAEAA 358

Query: 349 XXXXXXXXXXXXXXXXYGRDPNWGRIAAAAGYSGVSFNQNLLRVELGDILLMDGGEPQSF 408
                           YGRDPNWGRIAAAAGYSGVSFNQNLLRVELGD LLMDGGEPQSF
Sbjct: 359 KVARSVASSSLVKAAVYGRDPNWGRIAAAAGYSGVSFNQNLLRVELGDTLLMDGGEPQSF 418

Query: 409 DRDAASSYLKRAGESHGTVRIQISVGNGPGSGQAWGCDLSYDYVKINAEYTS 460
           DR  ASSYL++AGE+HGTVRIQIS+GNGPG GQAWGCDLSYDYVKINAEYTS
Sbjct: 419 DRGEASSYLRKAGETHGTVRIQISIGNGPGHGQAWGCDLSYDYVKINAEYTS 470