Miyakogusa Predicted Gene

Lj1g3v4538890.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v4538890.1 tr|G7KZK3|G7KZK3_MEDTR CLIP-associating protein
OS=Medicago truncatula GN=MTR_7g099480 PE=4 SV=1,85.66,0,ARM
repeat,Armadillo-type fold; no description,Armadillo-like helical;
CLASP_N,CLASP N-terminal doma,CUFF.32613.1
         (503 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr7g099480.2 | CLIP-associating-like protein | HC | chr7:3990...   907   0.0  
Medtr7g099480.1 | CLIP-associating-like protein | HC | chr7:3990...   907   0.0  
Medtr1g069165.1 | CLIP-associated protein | HC | chr1:29760559-2...   788   0.0  

>Medtr7g099480.2 | CLIP-associating-like protein | HC |
            chr7:39902042-39918776 | 20130731
          Length = 1436

 Score =  907 bits (2344), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 430/502 (85%), Positives = 464/502 (92%), Gaps = 3/502 (0%)

Query: 1    MNHNTDKQYFDALYRDGNFRDSHNSYVPNFQRPLLRKNVAGRMSAGRRRSFDENQLSLGE 60
            +NHNTDKQY DA YR+GNFR+SHNSYVPNFQRPL+RKN  GRMSAGRRRSFD+NQLSLGE
Sbjct: 712  INHNTDKQYLDAPYREGNFRESHNSYVPNFQRPLVRKNATGRMSAGRRRSFDDNQLSLGE 771

Query: 61   MSSYADGPTSLHEALSEGLRSGSDWSARVAAFNYVHSLLQQGPKGTIEVVQNFEKVMKLF 120
            +SSY+DGP SLHEALSEGLRSGSDWS+RVAAFNY+HSLLQQGPKGT+EVVQNFEKVMKLF
Sbjct: 772  ISSYSDGPASLHEALSEGLRSGSDWSSRVAAFNYLHSLLQQGPKGTLEVVQNFEKVMKLF 831

Query: 121  FQHLDDPHHKVAQAALSTLADIVPACRKPFEGYMERILPHVFSRLIDPKELVRQPCSTTL 180
            FQHLDDPHHKVAQAALSTLADIVPACRKPFEGYMERILPHVFSRLIDPKE+VRQPCSTTL
Sbjct: 832  FQHLDDPHHKVAQAALSTLADIVPACRKPFEGYMERILPHVFSRLIDPKEVVRQPCSTTL 891

Query: 181  EVVSKTYSVDSLLPALLRSLDEQRSPKAKLAVIEFAISSFNKHAMNAEGAGNIGILKLWL 240
            EVVSKTYSVDSLLPALLRSLDEQRSPKAKLAVIEFAI SFNKHAMNAEGA NIGILKLWL
Sbjct: 892  EVVSKTYSVDSLLPALLRSLDEQRSPKAKLAVIEFAIKSFNKHAMNAEGAANIGILKLWL 951

Query: 241  AKLTPLVYDKNTKLKEAAITCIISVYSHFDSAAVLNFILSLSVEEQNSLRRALKQYTPRI 300
            AKLTPLV+DKNTKLKEAAITCIISVY+HFDS AVLNFILSLSVEEQNSLRRALKQYTPRI
Sbjct: 952  AKLTPLVHDKNTKLKEAAITCIISVYNHFDSTAVLNFILSLSVEEQNSLRRALKQYTPRI 1011

Query: 301  EVDLMNYLQSKKERQRSKASYDPSDVVGTSSDDGHVGFSRKAHYLGRYSVGSLDSDGGRK 360
            EVDL+NYLQ+KKERQRSK+SYDPSDVVGTSS+DG+VGFSRKAHYLGRYS GSLDSDGGRK
Sbjct: 1012 EVDLVNYLQNKKERQRSKSSYDPSDVVGTSSEDGYVGFSRKAHYLGRYSAGSLDSDGGRK 1071

Query: 361  WSSQDSMLMKASLGQASSIETQEHP---NHNIEADANSGCHGSKTEDLAYSVYPRGQNFS 417
            WSSQDS L+K+SLG A+S+E ++H    NHN+E D+N    GSK +DLAYSV P GQNF 
Sbjct: 1072 WSSQDSTLLKSSLGPAASVECEDHNHSHNHNLETDSNCDSPGSKPKDLAYSVNPMGQNFG 1131

Query: 418  AQTSQLGHVDSSMNFEGLSTPRLDVNSVMSLDHLNASEGYVHDKEHPSEVELNHHSVEAV 477
            +Q+SQLG VDSSMNFEGLSTPRLDVN ++SL+ LN  EGY HDKE PS +ELNHHS EAV
Sbjct: 1132 SQSSQLGQVDSSMNFEGLSTPRLDVNGLISLERLNVGEGYAHDKELPSALELNHHSTEAV 1191

Query: 478  NINSMVDTGPSIPQILHMVSYA 499
             INSM DTGPSIPQILHM+  A
Sbjct: 1192 KINSMADTGPSIPQILHMICNA 1213


>Medtr7g099480.1 | CLIP-associating-like protein | HC |
            chr7:39902042-39918776 | 20130731
          Length = 1449

 Score =  907 bits (2344), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 430/502 (85%), Positives = 464/502 (92%), Gaps = 3/502 (0%)

Query: 1    MNHNTDKQYFDALYRDGNFRDSHNSYVPNFQRPLLRKNVAGRMSAGRRRSFDENQLSLGE 60
            +NHNTDKQY DA YR+GNFR+SHNSYVPNFQRPL+RKN  GRMSAGRRRSFD+NQLSLGE
Sbjct: 725  INHNTDKQYLDAPYREGNFRESHNSYVPNFQRPLVRKNATGRMSAGRRRSFDDNQLSLGE 784

Query: 61   MSSYADGPTSLHEALSEGLRSGSDWSARVAAFNYVHSLLQQGPKGTIEVVQNFEKVMKLF 120
            +SSY+DGP SLHEALSEGLRSGSDWS+RVAAFNY+HSLLQQGPKGT+EVVQNFEKVMKLF
Sbjct: 785  ISSYSDGPASLHEALSEGLRSGSDWSSRVAAFNYLHSLLQQGPKGTLEVVQNFEKVMKLF 844

Query: 121  FQHLDDPHHKVAQAALSTLADIVPACRKPFEGYMERILPHVFSRLIDPKELVRQPCSTTL 180
            FQHLDDPHHKVAQAALSTLADIVPACRKPFEGYMERILPHVFSRLIDPKE+VRQPCSTTL
Sbjct: 845  FQHLDDPHHKVAQAALSTLADIVPACRKPFEGYMERILPHVFSRLIDPKEVVRQPCSTTL 904

Query: 181  EVVSKTYSVDSLLPALLRSLDEQRSPKAKLAVIEFAISSFNKHAMNAEGAGNIGILKLWL 240
            EVVSKTYSVDSLLPALLRSLDEQRSPKAKLAVIEFAI SFNKHAMNAEGA NIGILKLWL
Sbjct: 905  EVVSKTYSVDSLLPALLRSLDEQRSPKAKLAVIEFAIKSFNKHAMNAEGAANIGILKLWL 964

Query: 241  AKLTPLVYDKNTKLKEAAITCIISVYSHFDSAAVLNFILSLSVEEQNSLRRALKQYTPRI 300
            AKLTPLV+DKNTKLKEAAITCIISVY+HFDS AVLNFILSLSVEEQNSLRRALKQYTPRI
Sbjct: 965  AKLTPLVHDKNTKLKEAAITCIISVYNHFDSTAVLNFILSLSVEEQNSLRRALKQYTPRI 1024

Query: 301  EVDLMNYLQSKKERQRSKASYDPSDVVGTSSDDGHVGFSRKAHYLGRYSVGSLDSDGGRK 360
            EVDL+NYLQ+KKERQRSK+SYDPSDVVGTSS+DG+VGFSRKAHYLGRYS GSLDSDGGRK
Sbjct: 1025 EVDLVNYLQNKKERQRSKSSYDPSDVVGTSSEDGYVGFSRKAHYLGRYSAGSLDSDGGRK 1084

Query: 361  WSSQDSMLMKASLGQASSIETQEHP---NHNIEADANSGCHGSKTEDLAYSVYPRGQNFS 417
            WSSQDS L+K+SLG A+S+E ++H    NHN+E D+N    GSK +DLAYSV P GQNF 
Sbjct: 1085 WSSQDSTLLKSSLGPAASVECEDHNHSHNHNLETDSNCDSPGSKPKDLAYSVNPMGQNFG 1144

Query: 418  AQTSQLGHVDSSMNFEGLSTPRLDVNSVMSLDHLNASEGYVHDKEHPSEVELNHHSVEAV 477
            +Q+SQLG VDSSMNFEGLSTPRLDVN ++SL+ LN  EGY HDKE PS +ELNHHS EAV
Sbjct: 1145 SQSSQLGQVDSSMNFEGLSTPRLDVNGLISLERLNVGEGYAHDKELPSALELNHHSTEAV 1204

Query: 478  NINSMVDTGPSIPQILHMVSYA 499
             INSM DTGPSIPQILHM+  A
Sbjct: 1205 KINSMADTGPSIPQILHMICNA 1226


>Medtr1g069165.1 | CLIP-associated protein | HC |
            chr1:29760559-29744753 | 20130731
          Length = 1439

 Score =  788 bits (2034), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 384/496 (77%), Positives = 430/496 (86%), Gaps = 6/496 (1%)

Query: 1    MNHNTDKQYFDALYRDGNFRDSHNSYVPNFQRPLLRKNVAGRMSAGRRRSFDENQLSLGE 60
            MN N D+QY DALY+DGNFRDS NS VPNFQRPLLRKNVA R+S+GRRRS D++QLS GE
Sbjct: 724  MNPNVDRQYMDALYKDGNFRDSQNSCVPNFQRPLLRKNVAARVSSGRRRSVDDSQLSTGE 783

Query: 61   MSSYADGPTSLHEALSEGLRSGSDWSARVAAFNYVHSLLQQGPKGTIEVVQNFEKVMKLF 120
            +S+YADGP S+HEALSEGL SGSDWSARV+AFNY+HSLL+QG KG  EVVQNFEKVMKLF
Sbjct: 784  ISNYADGPASIHEALSEGLSSGSDWSARVSAFNYLHSLLEQGQKGIQEVVQNFEKVMKLF 843

Query: 121  FQHLDDPHHKVAQAALSTLADIVPACRKPFEGYMERILPHVFSRLIDPKELVRQPCSTTL 180
            FQHLDDPHHK+A AALSTLADI+  CRKPFEGYMER+LPHVFSRLIDPKELVRQ CSTTL
Sbjct: 844  FQHLDDPHHKIAHAALSTLADIIRTCRKPFEGYMERMLPHVFSRLIDPKELVRQACSTTL 903

Query: 181  EVVSKTYSVDSLLPALLRSLDEQRSPKAKLAVIEFAISSFNKHAMNAEGAGNIGILKLWL 240
            E V KTYS+DSLLPALLRSLDEQRSPKAKLAVIEFAISSFNKHAMN EGA NIGILKLWL
Sbjct: 904  EAVGKTYSIDSLLPALLRSLDEQRSPKAKLAVIEFAISSFNKHAMNPEGAANIGILKLWL 963

Query: 241  AKLTPLVYDKNTKLKEAAITCIISVYSHFDSAAVLNFILSLSVEEQNSLRRALKQYTPRI 300
            AKL PLV+DKNTKLKEAAITCIISVYSHFDS+AVLNFILSLSV+EQNSLRRALKQ TPRI
Sbjct: 964  AKLAPLVHDKNTKLKEAAITCIISVYSHFDSSAVLNFILSLSVDEQNSLRRALKQRTPRI 1023

Query: 301  EVDLMNYLQSKKERQRSKASYDPSDVVGTSSDDGHVGFSRKAHYLGRYSVGSLDSDGGRK 360
            EVDLMNYLQ+KKER RSK+SYDPSD VGTSS++G+ G SRKAHY+GRYS GSLDSDGGRK
Sbjct: 1024 EVDLMNYLQNKKER-RSKSSYDPSDNVGTSSEEGYAGLSRKAHYVGRYSGGSLDSDGGRK 1082

Query: 361  WSSQDSMLMKASLGQASSIETQEHPNHNIEADANSGCHGSKTEDLAYSVYPRGQNFSAQT 420
            WSSQDS L+KAS GQ +S ET+EH   N++ + +S   GSK +DLAYS+    QNF  QT
Sbjct: 1083 WSSQDSNLIKASRGQPASDETEEHLYQNLQTNCDSDIVGSKAKDLAYSIDSMDQNFGFQT 1142

Query: 421  SQLGHVDSSMNFEGLSTPRLDVNSVMSLDHLNASEGYVHDKEHPSEVELNHHSVEAVNIN 480
             +LG+VDS+MNFEGL +  +DVN VMSL+HLN +EG+    EH SE+  NHHS E V +N
Sbjct: 1143 DRLGYVDSTMNFEGLPSD-VDVNGVMSLEHLNIAEGF----EHLSELNHNHHSAEDVKVN 1197

Query: 481  SMVDTGPSIPQILHMV 496
             M +TG SIPQILHM+
Sbjct: 1198 HMTNTGLSIPQILHMI 1213