Miyakogusa Predicted Gene

Lj1g3v4528640.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v4528640.1 tr|Q9C9B5|Q9C9B5_ARATH At1g73940/F2P9_19
OS=Arabidopsis thaliana GN=F2P9.19 PE=2 SV=1,37.07,9e-18,
,CUFF.32583.1
         (125 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr5g097230.1 | hypothetical protein | HC | chr5:42570388-4256...   192   5e-50
Medtr5g097230.2 | hypothetical protein | HC | chr5:42570388-4256...   192   5e-50

>Medtr5g097230.1 | hypothetical protein | HC |
           chr5:42570388-42567440 | 20130731
          Length = 130

 Score =  192 bits (488), Expect = 5e-50,   Method: Compositional matrix adjust.
 Identities = 96/126 (76%), Positives = 104/126 (82%), Gaps = 6/126 (4%)

Query: 1   MFGTAIRCLAKKSKPKMGPIVMKTPPEQRATITRVLFDIVKEHGPISVPNTWERVKEVGL 60
           MFGTAIR  AKK KPK+G + + TPPEQR TITR LFDIVKEHGPI+V NTWERVKEVGL
Sbjct: 1   MFGTAIRNAAKKLKPKLGAVTLTTPPEQRQTITRALFDIVKEHGPITVSNTWERVKEVGL 60

Query: 61  KDLKSKNHMKIVLRWMRERQKLRLVCNHVGAHKQFLYTTWFTNPGTAQATPGG------S 114
           KDL SKNHMK+VLRWMRERQKLRLVCNHVGAHKQFLYTTWFT PGT Q T         S
Sbjct: 61  KDLTSKNHMKVVLRWMRERQKLRLVCNHVGAHKQFLYTTWFTKPGTTQTTTTTTTTTTKS 120

Query: 115 VPSKQK 120
           +PSK++
Sbjct: 121 IPSKKR 126


>Medtr5g097230.2 | hypothetical protein | HC |
           chr5:42570388-42567440 | 20130731
          Length = 130

 Score =  192 bits (488), Expect = 5e-50,   Method: Compositional matrix adjust.
 Identities = 96/126 (76%), Positives = 104/126 (82%), Gaps = 6/126 (4%)

Query: 1   MFGTAIRCLAKKSKPKMGPIVMKTPPEQRATITRVLFDIVKEHGPISVPNTWERVKEVGL 60
           MFGTAIR  AKK KPK+G + + TPPEQR TITR LFDIVKEHGPI+V NTWERVKEVGL
Sbjct: 1   MFGTAIRNAAKKLKPKLGAVTLTTPPEQRQTITRALFDIVKEHGPITVSNTWERVKEVGL 60

Query: 61  KDLKSKNHMKIVLRWMRERQKLRLVCNHVGAHKQFLYTTWFTNPGTAQATPGG------S 114
           KDL SKNHMK+VLRWMRERQKLRLVCNHVGAHKQFLYTTWFT PGT Q T         S
Sbjct: 61  KDLTSKNHMKVVLRWMRERQKLRLVCNHVGAHKQFLYTTWFTKPGTTQTTTTTTTTTTKS 120

Query: 115 VPSKQK 120
           +PSK++
Sbjct: 121 IPSKKR 126