Miyakogusa Predicted Gene
- Lj1g3v4528630.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj1g3v4528630.1 Non Characterized Hit- tr|I1N9X4|I1N9X4_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.31302
PE,84.14,0,WD40,WD40 repeat; WD_REPEATS_2,WD40 repeat;
WD_REPEATS_REGION,WD40-repeat-containing domain; SUBFAMI,CUFF.32591.1
(789 letters)
Database: Medicago_aa4.0v1
62,319 sequences; 21,947,249 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Medtr7g099210.1 | transducin/WD-like repeat-protein | HC | chr7:... 1212 0.0
Medtr1g069355.1 | transducin/WD-like repeat-protein | HC | chr1:... 938 0.0
Medtr1g069355.2 | transducin/WD-like repeat-protein | HC | chr1:... 928 0.0
Medtr4g119620.1 | transducin/WD40 repeat protein | HC | chr4:495... 65 3e-10
Medtr1g072140.1 | transducin/WD40 repeat protein | HC | chr1:320... 62 3e-09
Medtr3g106080.1 | TBP-associated factor 5 | HC | chr3:48932864-4... 60 7e-09
Medtr6g005220.1 | denticleless-like protein | HC | chr6:664598-6... 55 3e-07
Medtr4g088640.1 | WD40 domain protein | LC | chr4:35254776-35252... 52 3e-06
Medtr4g095058.1 | F-box-like/WD repeat TBL1XR1-like protein | HC... 52 3e-06
Medtr5g016370.1 | transducin family protein/WD-40 repeat protein... 52 3e-06
Medtr4g095058.2 | F-box-like/WD repeat TBL1XR1-like protein | HC... 52 3e-06
Medtr5g022690.1 | U4/U6 small nuclear ribonucleoprotein PRP4 | H... 52 3e-06
Medtr5g016350.1 | transducin family protein/WD-40 repeat protein... 51 3e-06
Medtr5g016350.2 | transducin family protein/WD-40 repeat protein... 51 5e-06
>Medtr7g099210.1 | transducin/WD-like repeat-protein | HC |
chr7:39765251-39759245 | 20130731
Length = 771
Score = 1212 bits (3137), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 610/772 (79%), Positives = 649/772 (84%), Gaps = 36/772 (4%)
Query: 28 LLARREISPRTKHVAKWHWGGAXXXXXXXXXXXXXXXXDARRGLLAWVEADSLRHLSAKY 87
LLARREISPRTKHVA+ DA+RGLL+WVEADSLRHLSAKY
Sbjct: 22 LLARREISPRTKHVAR----------------------DAKRGLLSWVEADSLRHLSAKY 59
Query: 88 CPLLPPPRSTIAAAFSPDGKVLASTHGDHTVKIIDCETGSCLKVLVGHRRTPWVVRFHPL 147
CPLLP PRSTIAAAFSPDGKVLASTHGDHTVKIIDCETG CLKVL+GH RTPWVVRFHPL
Sbjct: 60 CPLLPAPRSTIAAAFSPDGKVLASTHGDHTVKIIDCETGRCLKVLIGHMRTPWVVRFHPL 119
Query: 148 HPQILASGSLDQEVRLWDANTSECTISHHFYRPIASIAFHAKGEIIAVASGHKLYIWHYN 207
HP+ILASGSLDQEVRLWDANTSEC SHHFYRPIASIAFHAKGEIIAVASGHKLYIWHY+
Sbjct: 120 HPKILASGSLDQEVRLWDANTSECITSHHFYRPIASIAFHAKGEIIAVASGHKLYIWHYD 179
Query: 208 KKGEA-FSPIFVLKTRRSLRAVHFHPHAAPYLLTAEVNDLDSSDSSMTEATSLGYLKYPP 266
KKGEA +SPIFVLKTRRSLRAVHFHPHAAPYLLTAEVNDLDSSDSSMTEATS+GYL+YPP
Sbjct: 180 KKGEASYSPIFVLKTRRSLRAVHFHPHAAPYLLTAEVNDLDSSDSSMTEATSIGYLQYPP 239
Query: 267 PAVVVTNVHPTEHISLP----YVSLPFFIMPSFTVDESRGETLHASHDV-SVSMQIESSA 321
PAV VTNVHPTEH++L VSLPFF++P +TVDESR E HASHD S +QIESSA
Sbjct: 240 PAVFVTNVHPTEHVTLSSEPTNVSLPFFLVPPYTVDESRAELQHASHDAGSGRIQIESSA 299
Query: 322 ----QVDTNATE-HDTTVSPMDTVSEMPSSSQTGTQHPAHATFSNGMGVGINNLTRDGME 376
Q DTN+TE HDTTVSPMDTVSE+P++SQ GT++PAH FSNGMG+GI NLT DGME
Sbjct: 300 VAQFQADTNSTEQHDTTVSPMDTVSEIPTNSQAGTEYPAHTAFSNGMGIGIGNLTMDGME 359
Query: 377 TDETKLAEGSQHGNSTNTYSLNGVLNGLSRQTANGGFFSEFGQLQQLFSSRDPSGWELPF 436
TDET+ AEGSQH N T+ SLNG+L+GLSRQTAN G E G SSRDPSGWELPF
Sbjct: 360 TDETRPAEGSQHRNPTDASSLNGMLHGLSRQTANHGVHPEDGH--PFVSSRDPSGWELPF 417
Query: 437 LQGWLMGQSQAGVPPMLPHIGASRDILSQQIGXXXXXXXXXXXXXXXXXXXXXMPGSTSI 496
LQGW+MGQSQAG+P MLPH G SRD L+ QI M GS +I
Sbjct: 418 LQGWMMGQSQAGLPSMLPHTGVSRDTLAPQISSSVMANTLPTSNADVAMPSSAMSGSINI 477
Query: 497 PGSSMRSGLRHSFSQPHVPVSESGNLAASVNIPQDGSDIQAIMSRIQSELATSVXXXX-X 555
PGSS+RSGLR FS PVSESGNLAAS+N P DGSDIQ IMSRIQSELATSV
Sbjct: 478 PGSSVRSGLRSHFSHSRTPVSESGNLAASINTPHDGSDIQTIMSRIQSELATSVAAAAAT 537
Query: 556 ELPCTVKLRVWSHDIKNPCAPLNADKCRLTIPHAVLCSEMGAHFSPCGRFLAACVACMLP 615
ELPCTVKLRVWSHDIKNPC+PLNAD+CRL IPHAVLCSEMGAHFSPCGRFLAACVACMLP
Sbjct: 538 ELPCTVKLRVWSHDIKNPCSPLNADRCRLIIPHAVLCSEMGAHFSPCGRFLAACVACMLP 597
Query: 616 RIEADPGLQAPVHQESGLSNSPTRHPISAHQVMYELRIYSLEEATFGSVLASRAIRAAHC 675
IEADPGLQ PVHQESG++ SPTRHPISAHQVMYELRIYSLEEATFG VLASRAIRAAHC
Sbjct: 598 HIEADPGLQTPVHQESGIATSPTRHPISAHQVMYELRIYSLEEATFGLVLASRAIRAAHC 657
Query: 676 LTSIQFSPTSEHILLAYGRRHGSLLKSIVIDGETTLPIYTVLEVYRVSDMELVRVLPSAE 735
LTSIQFSPTSEHILLAYGRRHGSLLKSIVIDGETTLPIYTVLEVYRVSDMELVRVLPSAE
Sbjct: 658 LTSIQFSPTSEHILLAYGRRHGSLLKSIVIDGETTLPIYTVLEVYRVSDMELVRVLPSAE 717
Query: 736 DEVNVACFHPFAGGGLVYGTKEGKLRILKYDGAHVVSGTGPSYYPEETIIGV 787
DEVNVACFHPF GGGLVYGTKEGKLRIL YDGA V+GTGPSY+PEETI+GV
Sbjct: 718 DEVNVACFHPFPGGGLVYGTKEGKLRILHYDGARPVNGTGPSYFPEETIVGV 769
>Medtr1g069355.1 | transducin/WD-like repeat-protein | HC |
chr1:29967233-29974817 | 20130731
Length = 743
Score = 938 bits (2425), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 493/762 (64%), Positives = 554/762 (72%), Gaps = 56/762 (7%)
Query: 28 LLARREISPRTKHVAKWHWGGAXXXXXXXXXXXXXXXXDARRGLLAWVEADSLRHLSAKY 87
LLA+REISPR KHV K HWG + DA+ GLL+WVEA+SL+HLSAKY
Sbjct: 34 LLAQREISPRNKHVRKCHWGESSESKSGCSRSGTVV--DAKCGLLSWVEAESLQHLSAKY 91
Query: 88 CPLLPPPRSTIAAAFSPDGKVLASTHGDHTVKIIDCETGSCLKVLVGHRRTPWVVRFHPL 147
CPLLP PRSTIAA+FSPDGK+LASTHGDHTVKIIDCETG+CLKVLVGHRRTPWVVRFHPL
Sbjct: 92 CPLLPAPRSTIAASFSPDGKILASTHGDHTVKIIDCETGNCLKVLVGHRRTPWVVRFHPL 151
Query: 148 HPQILASGSLDQEVRLWDANTSECTISHHFYRPIASIAFHAKGEIIAVASGHKLYIWHYN 207
QILASGSLDQEVRLWDA++SE +SH+FYRPIAS+AFHA GEIIAVASGHKLY+WHY
Sbjct: 152 QRQILASGSLDQEVRLWDASSSEWILSHYFYRPIASLAFHANGEIIAVASGHKLYMWHYK 211
Query: 208 KKGEAFSPIFVLKTRRSLRAVHFHPHAAPYLLTAEVNDLDSSDSSMTEATSLGYLKYPPP 267
E SP+FVLKTRRSLRAVHFHPH APYLLTA+VNDL+SSD SMTEATS G+L+YPPP
Sbjct: 212 NARELSSPVFVLKTRRSLRAVHFHPHGAPYLLTAQVNDLNSSDCSMTEATSHGHLEYPPP 271
Query: 268 AVVVTNVHPTEHISLPYVSLPFFIMPSFTVDESRGETLHASHDVSV-SMQIESSAQVDTN 326
AV VTNVHP I++ S SR E HAS+DV + SMQ+E N
Sbjct: 272 AVFVTNVHPRTQINM-----------SSEPPVSRVELQHASNDVGLSSMQVEQYGTRLVN 320
Query: 327 ATEHDTTVSPMDTVSEMPSSSQTGTQHPAHATFSNGMGVGINNLTRDGMETDETKLAEGS 386
SE+P+SSQTG ++ AH T N M +GINNLT G E ET+ AE S
Sbjct: 321 --------------SEIPTSSQTGAEYNAHTTLPNQMRIGINNLTMGGREAYETEPAEAS 366
Query: 387 QHGNSTNTYSLNGVLNGLSRQTANGGFFSEFGQLQQLFSSRDPSGWELPFLQGWLMGQSQ 446
QH N+ + V+ + SE GQ Q+ S D +GWELPFLQGWL+GQSQ
Sbjct: 367 QHENA------DHVVKRVE--------LSEHGQFPQIVPSPDSNGWELPFLQGWLVGQSQ 412
Query: 447 AGVPPMLPHIGASRDILSQQIGXXXXXXXXXXXXXXXXXXXXXMPGSTSIPGSSMRSGLR 506
GVP MLP QQIG MP SIP + ++SGL+
Sbjct: 413 VGVPSMLP----------QQIGSFTMPSNLFTTNVELAVPPSGMPNGISIP-AVLQSGLQ 461
Query: 507 HSFSQPHVPVSESGNLAASVNIPQDGSDIQAIMSRIQSELATSV-XXXXXELPCTVKLRV 565
+ FS +PV++ GNL S+N+P DG D Q I++RIQSELA SV ELPCTV L+V
Sbjct: 462 NQFSPSRLPVTDFGNLVPSINLPHDGFDSQTIINRIQSELAKSVATAAATELPCTVNLKV 521
Query: 566 WSHDIKNPCAPLNADKCRLTIPHAVLCSEMGAHFSPCGRFLAACVACMLPRIEADPGLQA 625
WS+D+KNPCAPL +CRLTIPH VLCSEMGAHFSPCGRFLAACVACM P +EADPGLQ
Sbjct: 522 WSYDLKNPCAPL--QRCRLTIPHVVLCSEMGAHFSPCGRFLAACVACMHPHMEADPGLQT 579
Query: 626 PVHQESGLSNSPTRHPISAHQVMYELRIYSLEEATFGSVLASRAIRAAHCLTSIQFSPTS 685
VHQE GL SPTRHPISAHQVMYELRIYSLEEATFGSVL SR IRAAHCLTSIQFSPTS
Sbjct: 580 LVHQEPGLPTSPTRHPISAHQVMYELRIYSLEEATFGSVLVSRPIRAAHCLTSIQFSPTS 639
Query: 686 EHILLAYGRRHGSLLKSIVIDGETTLPIYTVLEVYRVSDMELVRVLPSAEDEVNVACFHP 745
EHILLAYGRRH SLLKSIV+DGE T IYTVLEVYRVSDMELVRVL SAEDEVNVACFHP
Sbjct: 640 EHILLAYGRRHSSLLKSIVLDGEKTSSIYTVLEVYRVSDMELVRVLSSAEDEVNVACFHP 699
Query: 746 FAGGGLVYGTKEGKLRILKYDGAHVVSGTGPSYYPEETIIGV 787
F GGGLVYGTKEGKL + ++D V+GTG Y+PEE IIGV
Sbjct: 700 FPGGGLVYGTKEGKLSVFQFDRTCNVNGTGSGYFPEENIIGV 741
>Medtr1g069355.2 | transducin/WD-like repeat-protein | HC |
chr1:29967264-29974810 | 20130731
Length = 760
Score = 928 bits (2398), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 493/779 (63%), Positives = 554/779 (71%), Gaps = 73/779 (9%)
Query: 28 LLARREISPRTKHVAKWHWGGAXXXXXXXXXXXXXXXXDARRGLLAWVEADSLRHLSAKY 87
LLA+REISPR KHV K HWG + DA+ GLL+WVEA+SL+HLSAKY
Sbjct: 34 LLAQREISPRNKHVRKCHWGESSESKSGCSRSGTVV--DAKCGLLSWVEAESLQHLSAKY 91
Query: 88 CPLLPPPRSTIAAAFSPDGKVLASTHGDHTVKIIDCETGSCLKVLVGHRRTPWVVRFHPL 147
CPLLP PRSTIAA+FSPDGK+LASTHGDHTVKIIDCETG+CLKVLVGHRRTPWVVRFHPL
Sbjct: 92 CPLLPAPRSTIAASFSPDGKILASTHGDHTVKIIDCETGNCLKVLVGHRRTPWVVRFHPL 151
Query: 148 HPQILASGSLDQEVRLWDANTSECTISHHFYRPIASIAFHAKGEIIAVASGHKLYIWHYN 207
QILASGSLDQEVRLWDA++SE +SH+FYRPIAS+AFHA GEIIAVASGHKLY+WHY
Sbjct: 152 QRQILASGSLDQEVRLWDASSSEWILSHYFYRPIASLAFHANGEIIAVASGHKLYMWHYK 211
Query: 208 KKGEAFSPIFVLKTRRSLRAVHFHPHAAPYLLTAEVNDLDSSDSSMTEATSLGYLKYPPP 267
E SP+FVLKTRRSLRAVHFHPH APYLLTA+VNDL+SSD SMTEATS G+L+YPPP
Sbjct: 212 NARELSSPVFVLKTRRSLRAVHFHPHGAPYLLTAQVNDLNSSDCSMTEATSHGHLEYPPP 271
Query: 268 AVVVTNVHPTEHISLPYVSLPFFIMPSFTVDESRGETLHASHDVSV-SMQIESSAQVDTN 326
AV VTNVHP I++ S SR E HAS+DV + SMQ+E N
Sbjct: 272 AVFVTNVHPRTQINM-----------SSEPPVSRVELQHASNDVGLSSMQVEQYGTRLVN 320
Query: 327 ATEHDTTVSPMDTVSEMPSSSQTGTQHPAHATFSNGMGVGINNLTRDGMETDETKLAEGS 386
SE+P+SSQTG ++ AH T N M +GINNLT G E ET+ AE S
Sbjct: 321 --------------SEIPTSSQTGAEYNAHTTLPNQMRIGINNLTMGGREAYETEPAEAS 366
Query: 387 QHGNSTNTYSLNGVLNGLSRQTANGGFFSEFGQLQQLFSSRDPSGWELPFLQGWLMGQSQ 446
QH N+ + V+ + SE GQ Q+ S D +GWELPFLQGWL+GQSQ
Sbjct: 367 QHENA------DHVVKRVE--------LSEHGQFPQIVPSPDSNGWELPFLQGWLVGQSQ 412
Query: 447 AGVPPMLPHIGASRDILSQQIGXXXXXXXXXXXXXXXXXXXXXMPGSTSIPGSSMRSGLR 506
GVP MLP QQIG MP SIP + ++SGL+
Sbjct: 413 VGVPSMLP----------QQIGSFTMPSNLFTTNVELAVPPSGMPNGISIP-AVLQSGLQ 461
Query: 507 HSFSQPHVPVSESGNLAASVNIPQDGSDIQAIMSRIQSELATSV-XXXXXELPCTVKLRV 565
+ FS +PV++ GNL S+N+P DG D Q I++RIQSELA SV ELPCTV L+V
Sbjct: 462 NQFSPSRLPVTDFGNLVPSINLPHDGFDSQTIINRIQSELAKSVATAAATELPCTVNLKV 521
Query: 566 WSHDIKNPCAPLNADKCRLTIPHAVLCSEMGAHFSPCGRFLAACVACMLPRIEADPGLQA 625
WS+D+KNPCAPL +CRLTIPH VLCSEMGAHFSPCGRFLAACVACM P +EADPGLQ
Sbjct: 522 WSYDLKNPCAPL--QRCRLTIPHVVLCSEMGAHFSPCGRFLAACVACMHPHMEADPGLQT 579
Query: 626 PVHQESGLSNSPTRHPISAHQVMYELRIYSLEEATFGSVLASRAIRAAHCLTSIQ----- 680
VHQE GL SPTRHPISAHQVMYELRIYSLEEATFGSVL SR IRAAHCLTSIQ
Sbjct: 580 LVHQEPGLPTSPTRHPISAHQVMYELRIYSLEEATFGSVLVSRPIRAAHCLTSIQVLCSL 639
Query: 681 ------------FSPTSEHILLAYGRRHGSLLKSIVIDGETTLPIYTVLEVYRVSDMELV 728
FSPTSEHILLAYGRRH SLLKSIV+DGE T IYTVLEVYRVSDMELV
Sbjct: 640 YFLLFFHHNITTFSPTSEHILLAYGRRHSSLLKSIVLDGEKTSSIYTVLEVYRVSDMELV 699
Query: 729 RVLPSAEDEVNVACFHPFAGGGLVYGTKEGKLRILKYDGAHVVSGTGPSYYPEETIIGV 787
RVL SAEDEVNVACFHPF GGGLVYGTKEGKL + ++D V+GTG Y+PEE IIGV
Sbjct: 700 RVLSSAEDEVNVACFHPFPGGGLVYGTKEGKLSVFQFDRTCNVNGTGSGYFPEENIIGV 758
>Medtr4g119620.1 | transducin/WD40 repeat protein | HC |
chr4:49575751-49578750 | 20130731
Length = 326
Score = 64.7 bits (156), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 36/106 (33%), Positives = 56/106 (52%), Gaps = 3/106 (2%)
Query: 101 AFSPDGKVLASTHGDHTVKIIDCETGSCLKVLVGHRRTPWVVRFHPLHPQILASGSLDQE 160
AFS D + L S D T+++ D TGS +K L GH + V F+P ++ SGS D+
Sbjct: 85 AFSSDSRYLVSASDDKTIRLWDVPTGSLVKTLHGHTNYVFCVNFNP-QSNVIVSGSFDET 143
Query: 161 VRLWDANTSEC-TISHHFYRPIASIAFHAKGEIIAVASGHKL-YIW 204
VR+WD + +C + P+ ++ F+ G +I +S L IW
Sbjct: 144 VRVWDVKSGKCLKVLPAHSDPVTAVDFNRDGTLIVSSSYDGLCRIW 189
Score = 56.6 bits (135), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 34/108 (31%), Positives = 54/108 (50%), Gaps = 4/108 (3%)
Query: 102 FSPDGKVLASTHGDHTVKIIDCETGSCLKVLVGHRRTPWVVRFHPLHPQILASGSLDQEV 161
F+P V+ S D TV++ D ++G CLKVL H V F+ ++ S S D
Sbjct: 128 FNPQSNVIVSGSFDETVRVWDVKSGKCLKVLPAHSDPVTAVDFNR-DGTLIVSSSYDGLC 186
Query: 162 RLWDANTSEC--TISHHFYRPIASIAFHAKGEIIAVAS-GHKLYIWHY 206
R+WDA+T C T+ P++ + F + I V + + L +W+Y
Sbjct: 187 RIWDASTGHCIKTLIDDENPPVSYVKFSPNAKFILVGTLDNNLRLWNY 234
>Medtr1g072140.1 | transducin/WD40 repeat protein | HC |
chr1:32005480-32003360 | 20130731
Length = 316
Score = 61.6 bits (148), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 45/151 (29%), Positives = 70/151 (46%), Gaps = 14/151 (9%)
Query: 101 AFSPDGKVLASTHGDHTVKIIDCETGSCLKVLVGHRRTPWVVRFHPLHPQILASGSLDQE 160
A+S D + S D T++I D TG C+K L GH + V F+P + SGS D+
Sbjct: 76 AWSSDSHYICSASDDKTLRIWDANTGDCVKTLRGHGHNVFCVNFNP-QSNYIVSGSFDET 134
Query: 161 VRLWDANTSECTISHHFYR----PIASIAFHAKGEIIAVASGHK--LYIWHYNKKGEAFS 214
VR+W+ T + S H + P+ S+ F+ G +I V+ H IW N A
Sbjct: 135 VRVWEVKTGK---SVHVIKAHAMPVTSVDFNRDGSLI-VSGSHDGSCKIWDTN--SGALL 188
Query: 215 PIFVLKTRRSLRAVHFHPHAAPYLLTAEVND 245
+ ++ F P+ ++L A +ND
Sbjct: 189 KTLIDDKVPAVSFAKFSPN-GKFILVATLND 218
>Medtr3g106080.1 | TBP-associated factor 5 | HC |
chr3:48932864-48942802 | 20130731
Length = 669
Score = 60.5 bits (145), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 31/72 (43%), Positives = 42/72 (58%), Gaps = 1/72 (1%)
Query: 98 IAAAFSPDGKVLASTHGDHTVKIIDCETGSCLKVLVGHRRTPWVVRFHPLHPQILASGSL 157
++ + SPDG+ +AS D T+ + D +G C+ LVGH W + F ILASGS
Sbjct: 549 LSLSMSPDGRYMASGDEDGTIMMWDLSSGRCVTPLVGHTSCVWSLAFSS-EGSILASGSA 607
Query: 158 DQEVRLWDANTS 169
D V+LWD NTS
Sbjct: 608 DCTVKLWDVNTS 619
>Medtr6g005220.1 | denticleless-like protein | HC |
chr6:664598-660140 | 20130731
Length = 504
Score = 55.1 bits (131), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 38/81 (46%)
Query: 85 AKYCPLLPPPRSTIAAAFSPDGKVLASTHGDHTVKIIDCETGSCLKVLVGHRRTPWVVRF 144
A+ C + + D + + GD TVK+ D + CL VL GH + +
Sbjct: 99 ARICEWSSHNNAVFDVNWIKDDTQILTASGDQTVKVWDVQEKKCLGVLTGHTGSVKSISS 158
Query: 145 HPLHPQILASGSLDQEVRLWD 165
HP +P IL SGS D RLWD
Sbjct: 159 HPTNPDILVSGSRDGSFRLWD 179
>Medtr4g088640.1 | WD40 domain protein | LC | chr4:35254776-35252626
| 20130731
Length = 383
Score = 52.0 bits (123), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 42/154 (27%), Positives = 69/154 (44%), Gaps = 13/154 (8%)
Query: 95 RSTIAAAFSPDGKVLASTHGDHTVKIIDCETGSCLKVLVGHRRTPWVVRFHPLHPQILAS 154
+S ++ S DGK++AS I ETG + L H T + VRF P + A+
Sbjct: 108 QSLLSCDLSSDGKIVASGGIGKKPFICYLETGLSVTALESHLDTIFEVRFQP-GSTVFAT 166
Query: 155 GSLDQEVRLWDANTSE---CTISHHFYRPIASIAFHAKGEIIAVA-SGHKLYIWHYNKKG 210
S D+ V+LWDAN+ E C + H + S+ FH G ++ + + + +W +K
Sbjct: 167 SSADKTVKLWDANSPERSFCNVVGH-NGTVRSLDFHPLGGVLCTSDTCDVIKVWDLHKN- 224
Query: 211 EAFSPIFVLKTRRSLRAVHFHPHAAPYLLTAEVN 244
++ ++ V F P + L A N
Sbjct: 225 ------VLVNEFKAGSLVRFQPGSGKLLAVANRN 252
>Medtr4g095058.1 | F-box-like/WD repeat TBL1XR1-like protein | HC |
chr4:39607610-39623874 | 20130731
Length = 578
Score = 51.6 bits (122), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 38/113 (33%), Positives = 53/113 (46%), Gaps = 10/113 (8%)
Query: 102 FSPDGKVLASTHGDHTVKIIDCETGSCLKVLVGHRRTPWVVRFHPLHPQ--------ILA 153
+ P G +LAS D T KI + L H + + +R+ P P +LA
Sbjct: 421 WDPTGTLLASCSDDITAKIWSVKQDKYLHDFREHSKEIYTIRWSPTGPGTNNPNKKLLLA 480
Query: 154 SGSLDQEVRLWDANTSECTISHHFYR-PIASIAFHAKGEIIAVASGHK-LYIW 204
S S D V+LWD + S + +R P+ S+AF GE IA S K L+IW
Sbjct: 481 SASFDSTVKLWDIELGKLIHSLNGHRHPVYSVAFSPNGEYIASGSLDKSLHIW 533
>Medtr5g016370.1 | transducin family protein/WD-40 repeat protein |
HC | chr5:5874227-5866099 | 20130731
Length = 595
Score = 51.6 bits (122), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 31/95 (32%), Positives = 50/95 (52%), Gaps = 2/95 (2%)
Query: 103 SPDGK-VLASTHGDHTVKIIDCETGSCLKVLVGHRRTPWVVRFHPLHPQILASGSLDQEV 161
+P+ K VLAS D TVK+ D E G + L GHR + + F P + + LASGS D+ +
Sbjct: 489 NPNKKLVLASASCDSTVKLWDAELGKLIHSLNGHRDRVYTISFSP-NGEYLASGSPDKSI 547
Query: 162 RLWDANTSECTISHHFYRPIASIAFHAKGEIIAVA 196
+W N + ++ I + ++ +G+ IA
Sbjct: 548 NIWSLNDGKIIKTYKGNGGIFEVCWNKEGDKIAAC 582
>Medtr4g095058.2 | F-box-like/WD repeat TBL1XR1-like protein | HC |
chr4:39607610-39623829 | 20130731
Length = 576
Score = 51.6 bits (122), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 38/113 (33%), Positives = 53/113 (46%), Gaps = 10/113 (8%)
Query: 102 FSPDGKVLASTHGDHTVKIIDCETGSCLKVLVGHRRTPWVVRFHPLHPQ--------ILA 153
+ P G +LAS D T KI + L H + + +R+ P P +LA
Sbjct: 419 WDPTGTLLASCSDDITAKIWSVKQDKYLHDFREHSKEIYTIRWSPTGPGTNNPNKKLLLA 478
Query: 154 SGSLDQEVRLWDANTSECTISHHFYR-PIASIAFHAKGEIIAVASGHK-LYIW 204
S S D V+LWD + S + +R P+ S+AF GE IA S K L+IW
Sbjct: 479 SASFDSTVKLWDIELGKLIHSLNGHRHPVYSVAFSPNGEYIASGSLDKSLHIW 531
>Medtr5g022690.1 | U4/U6 small nuclear ribonucleoprotein PRP4 | HC |
chr5:8972619-8969829 | 20130731
Length = 488
Score = 51.6 bits (122), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 39/142 (27%), Positives = 61/142 (42%), Gaps = 6/142 (4%)
Query: 101 AFSPDGKVLASTHGDHTVKIIDCETGSCLKVLVGHRRTPWVVRFHPLHPQILASGSLDQE 160
AF P GK L + D T ++ D ETG L + GH R + + FH + AS D
Sbjct: 286 AFHPSGKYLGTASDDKTWRLWDVETGEELLLQEGHSREVYSLAFHH-DGSLAASCGKDAL 344
Query: 161 VRLWDANTSECTISHHFY-RPIASIAFHAKGEIIAV-ASGHKLYIWHYNKKGEAFSPIFV 218
R+WD T ++ + +PI I+F G +A + IW K ++ +
Sbjct: 345 ARVWDLRTKRSLLALEGHVKPIRGISFSPNGYHLATGGEDNTCRIWDLRKNKSLYT---I 401
Query: 219 LKTRRSLRAVHFHPHAAPYLLT 240
+ + V F P +L+T
Sbjct: 402 AAHSKLISQVKFEPQEGYFLVT 423
>Medtr5g016350.1 | transducin family protein/WD-40 repeat protein |
HC | chr5:5861710-5850637 | 20130731
Length = 583
Score = 51.2 bits (121), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 36/116 (31%), Positives = 53/116 (45%), Gaps = 10/116 (8%)
Query: 102 FSPDGKVLASTHGDHTVKIIDCETGSCLKVLVGHRRTPWVVRFHPLHPQ--------ILA 153
+ P G +LAS D+T KI + + H + + +R+ P P +LA
Sbjct: 426 WDPTGSLLASCSDDNTAKIWSMKQDKYIHDFREHSKEVYTIRWSPTGPGTNNPNKKLVLA 485
Query: 154 SGSLDQEVRLWDANTSECTISHHFYRP-IASIAFHAKGEIIAVASGHK-LYIWHYN 207
S S D V+LWDA + S +R + S+AF GE +A S K + IW N
Sbjct: 486 SASFDSTVKLWDAELGKLIYSLSGHRDGVYSVAFSPNGEYLASGSPDKSINIWSLN 541
Score = 51.2 bits (121), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 32/95 (33%), Positives = 51/95 (53%), Gaps = 2/95 (2%)
Query: 103 SPDGK-VLASTHGDHTVKIIDCETGSCLKVLVGHRRTPWVVRFHPLHPQILASGSLDQEV 161
+P+ K VLAS D TVK+ D E G + L GHR + V F P + + LASGS D+ +
Sbjct: 477 NPNKKLVLASASFDSTVKLWDAELGKLIYSLSGHRDGVYSVAFSP-NGEYLASGSPDKSI 535
Query: 162 RLWDANTSECTISHHFYRPIASIAFHAKGEIIAVA 196
+W N + +++ I + ++ +G+ IA
Sbjct: 536 NIWSLNDGKIIKTYNGNGGIFEVCWNKEGDKIAAC 570
>Medtr5g016350.2 | transducin family protein/WD-40 repeat protein |
HC | chr5:5861710-5850637 | 20130731
Length = 519
Score = 50.8 bits (120), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 36/116 (31%), Positives = 53/116 (45%), Gaps = 10/116 (8%)
Query: 102 FSPDGKVLASTHGDHTVKIIDCETGSCLKVLVGHRRTPWVVRFHPLHPQ--------ILA 153
+ P G +LAS D+T KI + + H + + +R+ P P +LA
Sbjct: 362 WDPTGSLLASCSDDNTAKIWSMKQDKYIHDFREHSKEVYTIRWSPTGPGTNNPNKKLVLA 421
Query: 154 SGSLDQEVRLWDANTSECTISHHFYRP-IASIAFHAKGEIIAVASGHK-LYIWHYN 207
S S D V+LWDA + S +R + S+AF GE +A S K + IW N
Sbjct: 422 SASFDSTVKLWDAELGKLIYSLSGHRDGVYSVAFSPNGEYLASGSPDKSINIWSLN 477
Score = 50.8 bits (120), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 32/95 (33%), Positives = 51/95 (53%), Gaps = 2/95 (2%)
Query: 103 SPDGK-VLASTHGDHTVKIIDCETGSCLKVLVGHRRTPWVVRFHPLHPQILASGSLDQEV 161
+P+ K VLAS D TVK+ D E G + L GHR + V F P + + LASGS D+ +
Sbjct: 413 NPNKKLVLASASFDSTVKLWDAELGKLIYSLSGHRDGVYSVAFSP-NGEYLASGSPDKSI 471
Query: 162 RLWDANTSECTISHHFYRPIASIAFHAKGEIIAVA 196
+W N + +++ I + ++ +G+ IA
Sbjct: 472 NIWSLNDGKIIKTYNGNGGIFEVCWNKEGDKIAAC 506