Miyakogusa Predicted Gene
- Lj1g3v4528360.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj1g3v4528360.1 CUFF.32564.1
(249 letters)
Database: Medicago_aa4.0v1
62,319 sequences; 21,947,249 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Medtr1g069495.1 | auxin response factor | HC | chr1:30104004-300... 249 1e-66
Medtr6g488150.1 | auxin response factor | HC | chr6:33216291-332... 121 5e-28
Medtr1g070520.1 | auxin-responsive AUX/IAA family protein | HC |... 121 5e-28
Medtr5g030710.2 | auxin-responsive AUX/IAA family protein | HC |... 120 2e-27
Medtr5g030710.1 | auxin-responsive AUX/IAA family protein | HC |... 120 2e-27
Medtr1g080860.1 | auxin-responsive AUX/IAA family protein | HC |... 119 2e-27
Medtr1g080860.2 | auxin-responsive AUX/IAA family protein | HC |... 119 2e-27
Medtr1g093240.1 | auxin-responsive AUX/IAA family protein | HC |... 117 1e-26
Medtr1g093240.2 | auxin-responsive AUX/IAA family protein | HC |... 115 3e-26
Medtr5g067350.1 | auxin response factor | HC | chr5:28450190-284... 115 3e-26
Medtr2g100780.1 | auxin-responsive AUX/IAA family protein | HC |... 115 4e-26
Medtr2g100780.4 | auxin-responsive AUX/IAA family protein | HC |... 115 4e-26
Medtr2g100780.2 | auxin-responsive AUX/IAA family protein | HC |... 115 4e-26
Medtr8g067530.1 | auxin-responsive AUX/IAA family protein | HC |... 115 4e-26
Medtr2g100780.3 | auxin-responsive AUX/IAA family protein | HC |... 114 7e-26
Medtr8g103030.1 | auxin-responsive AUX/IAA family protein | HC |... 114 7e-26
Medtr8g014520.1 | auxin response factor | HC | chr8:4572622-4568... 113 2e-25
Medtr8g014520.2 | auxin response factor | HC | chr8:4572622-4568... 113 2e-25
Medtr2g101500.1 | auxin-responsive AUX/IAA family protein | HC |... 112 5e-25
Medtr1g070830.1 | auxin-responsive AUX/IAA family protein | HC |... 111 6e-25
Medtr7g096090.1 | auxin-responsive AUX/IAA family protein | HC |... 104 7e-23
Medtr1g076270.1 | auxin response factor | HC | chr1:33944737-339... 99 5e-21
Medtr1g093350.1 | auxin response factor | HC | chr1:33849453-338... 99 5e-21
Medtr1g040675.1 | auxin response factor | HC | chr1:15063378-150... 98 9e-21
Medtr4g124300.1 | auxin-responsive AUX/IAA family protein | HC |... 96 3e-20
Medtr1g093240.3 | auxin-responsive AUX/IAA family protein | HC |... 93 2e-19
Medtr1g085750.1 | auxin-responsive AUX/IAA family protein | HC |... 89 4e-18
Medtr7g110790.1 | auxin-responsive AUX/IAA family protein | HC |... 87 2e-17
Medtr4g011880.1 | auxin-responsive AUX/IAA family protein | HC |... 83 3e-16
Medtr2g102490.1 | auxin-responsive AUX/IAA family protein | HC |... 81 7e-16
Medtr3g106850.1 | auxin-responsive AUX/IAA family protein | HC |... 78 6e-15
Medtr1g040675.2 | auxin response factor | HC | chr1:15063472-150... 74 2e-13
Medtr4g115075.1 | auxin-responsive AUX/IAA family protein | HC |... 72 4e-13
Medtr1g085750.2 | auxin-responsive AUX/IAA family protein | HC |... 72 4e-13
Medtr1g109510.1 | auxin-responsive AUX/IAA family protein | HC |... 72 4e-13
Medtr2g005240.1 | auxin response factor 2 | HC | chr2:92911-1033... 59 4e-09
Medtr4g128070.1 | auxin-responsive AUX/IAA family protein | HC |... 58 8e-09
Medtr4g021580.1 | auxin response factor 2 | HC | chr4:7078271-70... 58 8e-09
Medtr5g067350.2 | auxin response factor | HC | chr5:28450190-284... 58 9e-09
Medtr6g488150.2 | auxin response factor | HC | chr6:33216341-332... 58 1e-08
Medtr8g100050.1 | auxin response factor 2 | HC | chr8:40230869-4... 54 2e-07
Medtr4g124300.2 | auxin-responsive AUX/IAA family protein | HC |... 52 4e-07
Medtr1g024025.1 | auxin response factor 2 | LC | chr1:7778460-77... 52 5e-07
Medtr4g021580.2 | auxin response factor 2 | HC | chr4:7078271-70... 50 2e-06
Medtr2g018690.1 | auxin response factor 2 | HC | chr2:5912688-59... 50 2e-06
Medtr4g124900.2 | auxin response factor 2 | HC | chr4:51795315-5... 49 4e-06
Medtr4g124900.1 | auxin response factor 2 | HC | chr4:51795315-5... 49 4e-06
>Medtr1g069495.1 | auxin response factor | HC |
chr1:30104004-30099851 | 20130731
Length = 272
Score = 249 bits (637), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 129/181 (71%), Positives = 145/181 (80%), Gaps = 5/181 (2%)
Query: 62 SQVVGWPPLRAYRMNSYNSHAKSQVTEVFNSMVENSKANIAVVRKSSDNGSVDNSIIGKE 121
SQVVGWPPLR+YR+NS+N++AKS TE FNS+ E SK N VVRKS+DNG+ DN I KE
Sbjct: 81 SQVVGWPPLRSYRVNSFNANAKS--TEAFNSVAEKSKNNNIVVRKSTDNGNDDNHINIKE 138
Query: 122 NRNPRTRSSLFVKVKMDGVPIGRKVDLSAHSSYETLAQSLEDMFNEPNTVLTCKVGLNGV 181
RN R S FVKV MDG+PIGRKVDLSAHSSYETLAQ+LEDMF+E T +T K G NG
Sbjct: 139 KRN--LRKSPFVKVNMDGIPIGRKVDLSAHSSYETLAQTLEDMFDESTTSVTSK-GSNGE 195
Query: 182 NHGIIAGADRHSKLFDGSSNFVLTYEDKEGDWMLVGDVPWWMFISSVRRLRIMGTSEANG 241
+H + +RHS L DGSS FVLTYEDKEGDWMLVGDVPW MF+SSVRRLRIM TSEANG
Sbjct: 196 DHNMTTRGERHSILLDGSSKFVLTYEDKEGDWMLVGDVPWGMFLSSVRRLRIMRTSEANG 255
Query: 242 L 242
L
Sbjct: 256 L 256
>Medtr6g488150.1 | auxin response factor | HC |
chr6:33216291-33219398 | 20130731
Length = 254
Score = 121 bits (304), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 75/191 (39%), Positives = 98/191 (51%), Gaps = 44/191 (23%)
Query: 55 LTNNAPTSQVVGWPPLRAYRMNSYNSHAKSQVTEVFNSMVENSKANIAVVRKSSDNGSVD 114
++ +A QVVGWPP+R++R NS +A + +DN V+
Sbjct: 93 ISGSAAKEQVVGWPPIRSFRKNS-----------------------MATQSQKNDNDDVE 129
Query: 115 NSIIGKENRNPRTRSSLFVKVKMDGVPIGRKVDLSAHSSYETLAQSLEDMFNEPNTVLTC 174
L+VKV MDG P RKVDL +Y+ L+ +LE MF +C
Sbjct: 130 -----------AKSGCLYVKVSMDGAPYLRKVDLKIFGTYKELSSALEKMF-------SC 171
Query: 175 KVGLNGVNHGIIA-GADRHSKLFD--GSSNFVLTYEDKEGDWMLVGDVPWWMFISSVRRL 231
+HG+ G S+L D S +VLTYEDK+GDWMLVGDVPW MFI S +RL
Sbjct: 172 FTISQFGSHGVFGQGNVCESRLMDLLHGSEYVLTYEDKDGDWMLVGDVPWKMFIDSCKRL 231
Query: 232 RIMGTSEANGL 242
RIM +SEA GL
Sbjct: 232 RIMKSSEAIGL 242
>Medtr1g070520.1 | auxin-responsive AUX/IAA family protein | HC |
chr1:31340838-31337022 | 20130731
Length = 245
Score = 121 bits (304), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 76/183 (41%), Positives = 97/183 (53%), Gaps = 39/183 (21%)
Query: 62 SQVVGWPPLRAYRMNSYNSHAKSQVTEVFNSMVENSKANIAVVRKSSDNGSVDNSIIGKE 121
+QVVGWPP+R++R N + + ++ +E E+ K N
Sbjct: 88 AQVVGWPPVRSFRKNMFAAQKSNEGSE------ESEKKN--------------------S 121
Query: 122 NRNPRTRSSLFVKVKMDGVPIGRKVDLSAHSSYETLAQSLEDMFNEPNTVLTCKVGLNGV 181
N NP + FVKV MDG P RKVDL + SY L+ +L MFN T N
Sbjct: 122 NNNPIS----FVKVSMDGAPYLRKVDLKMYKSYPELSDALAKMFNSFTTG-------NCE 170
Query: 182 NHGIIAGADRHSKLFD--GSSNFVLTYEDKEGDWMLVGDVPWWMFISSVRRLRIMGTSEA 239
+ GI + +KL D SS++V TYEDK+GDWMLVGDVPW MFI S +RLRIM EA
Sbjct: 171 SQGIKDFMNESNKLMDLLNSSDYVPTYEDKDGDWMLVGDVPWEMFIDSCKRLRIMKGKEA 230
Query: 240 NGL 242
GL
Sbjct: 231 IGL 233
>Medtr5g030710.2 | auxin-responsive AUX/IAA family protein | HC |
chr5:13126019-13120497 | 20130731
Length = 335
Score = 120 bits (300), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 78/186 (41%), Positives = 99/186 (53%), Gaps = 39/186 (20%)
Query: 59 APTS--QVVGWPPLRAYRMNSYNSHAKSQVTEVFNSMVENSKANIAVVRKSSDNGSVDNS 116
AP S QVVGWPP+R++R NS M SK N N VD
Sbjct: 175 APASKAQVVGWPPIRSFRKNS---------------MATASKNN---------NDEVD-- 208
Query: 117 IIGKENRNPRTRSSLFVKVKMDGVPIGRKVDLSAHSSYETLAQSLEDMFNEPNTVLTCKV 176
GK ++LFVKV MDG P RKVDL +++Y+ L+ +LE MF+ +
Sbjct: 209 --GKPGP-----AALFVKVSMDGAPYLRKVDLRTYATYQQLSSALEKMFS---CFTLGQC 258
Query: 177 GLNGVNHGIIAGADRHSKLFDGSSNFVLTYEDKEGDWMLVGDVPWWMFISSVRRLRIMGT 236
G +G + + L GS +VLTYEDK+GDWMLVGDVPW MFI + RRL+IM
Sbjct: 259 GSHGAPGKEMMSESKLRDLLHGS-EYVLTYEDKDGDWMLVGDVPWEMFIDTCRRLKIMKG 317
Query: 237 SEANGL 242
S+A GL
Sbjct: 318 SDAIGL 323
>Medtr5g030710.1 | auxin-responsive AUX/IAA family protein | HC |
chr5:13126144-13120365 | 20130731
Length = 335
Score = 120 bits (300), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 78/186 (41%), Positives = 99/186 (53%), Gaps = 39/186 (20%)
Query: 59 APTS--QVVGWPPLRAYRMNSYNSHAKSQVTEVFNSMVENSKANIAVVRKSSDNGSVDNS 116
AP S QVVGWPP+R++R NS M SK N N VD
Sbjct: 175 APASKAQVVGWPPIRSFRKNS---------------MATASKNN---------NDEVD-- 208
Query: 117 IIGKENRNPRTRSSLFVKVKMDGVPIGRKVDLSAHSSYETLAQSLEDMFNEPNTVLTCKV 176
GK ++LFVKV MDG P RKVDL +++Y+ L+ +LE MF+ +
Sbjct: 209 --GKPGP-----AALFVKVSMDGAPYLRKVDLRTYATYQQLSSALEKMFS---CFTLGQC 258
Query: 177 GLNGVNHGIIAGADRHSKLFDGSSNFVLTYEDKEGDWMLVGDVPWWMFISSVRRLRIMGT 236
G +G + + L GS +VLTYEDK+GDWMLVGDVPW MFI + RRL+IM
Sbjct: 259 GSHGAPGKEMMSESKLRDLLHGS-EYVLTYEDKDGDWMLVGDVPWEMFIDTCRRLKIMKG 317
Query: 237 SEANGL 242
S+A GL
Sbjct: 318 SDAIGL 323
>Medtr1g080860.1 | auxin-responsive AUX/IAA family protein | HC |
chr1:35977175-35973245 | 20130731
Length = 253
Score = 119 bits (299), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 78/183 (42%), Positives = 95/183 (51%), Gaps = 39/183 (21%)
Query: 62 SQVVGWPPLRAYRMNSYNSHAKSQVTEVFNSMVENSKANIAVVRKSSDNGSVDNSIIGKE 121
+QVVGWPP+R++R N N H KS NS E VD SI G
Sbjct: 96 AQVVGWPPVRSFRKNIVNVHQKS------NSETE-----------------VDKSISGGG 132
Query: 122 NRNPRTRSSLFVKVKMDGVPIGRKVDLSAHSSYETLAQSLEDMFNEPNTVLTCKVGLNGV 181
+ FVKV MDG P RKVDL + SY+ L+ +L MF+ T+ C
Sbjct: 133 G------NGAFVKVSMDGAPYLRKVDLKLYKSYQELSDALAKMFSS-FTIDNC------- 178
Query: 182 NHGIIAGADRHSKLFD--GSSNFVLTYEDKEGDWMLVGDVPWWMFISSVRRLRIMGTSEA 239
+ SKL D S++V TYEDK+GDWMLVGDVPW MF+ S +RLRIM SEA
Sbjct: 179 GSQVTKDFMNESKLIDLLNGSDYVPTYEDKDGDWMLVGDVPWEMFVQSCKRLRIMKGSEA 238
Query: 240 NGL 242
GL
Sbjct: 239 IGL 241
>Medtr1g080860.2 | auxin-responsive AUX/IAA family protein | HC |
chr1:35977175-35973245 | 20130731
Length = 243
Score = 119 bits (298), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 78/183 (42%), Positives = 95/183 (51%), Gaps = 39/183 (21%)
Query: 62 SQVVGWPPLRAYRMNSYNSHAKSQVTEVFNSMVENSKANIAVVRKSSDNGSVDNSIIGKE 121
+QVVGWPP+R++R N N H KS NS E VD SI G
Sbjct: 96 AQVVGWPPVRSFRKNIVNVHQKS------NSETE-----------------VDKSISGGG 132
Query: 122 NRNPRTRSSLFVKVKMDGVPIGRKVDLSAHSSYETLAQSLEDMFNEPNTVLTCKVGLNGV 181
+ FVKV MDG P RKVDL + SY+ L+ +L MF+ T+ C
Sbjct: 133 G------NGAFVKVSMDGAPYLRKVDLKLYKSYQELSDALAKMFSS-FTIDNC------- 178
Query: 182 NHGIIAGADRHSKLFD--GSSNFVLTYEDKEGDWMLVGDVPWWMFISSVRRLRIMGTSEA 239
+ SKL D S++V TYEDK+GDWMLVGDVPW MF+ S +RLRIM SEA
Sbjct: 179 GSQVTKDFMNESKLIDLLNGSDYVPTYEDKDGDWMLVGDVPWEMFVQSCKRLRIMKGSEA 238
Query: 240 NGL 242
GL
Sbjct: 239 IGL 241
>Medtr1g093240.1 | auxin-responsive AUX/IAA family protein | HC |
chr1:33903552-33900363 | 20130731
Length = 236
Score = 117 bits (292), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 73/183 (39%), Positives = 95/183 (51%), Gaps = 42/183 (22%)
Query: 62 SQVVGWPPLRAYRMNSYNSHAKSQVTEVFNSMVENSKANIAVVRKSSDNGSVDNSIIGKE 121
+QVVGWPP+R+YR N M+ N K++ N
Sbjct: 82 AQVVGWPPVRSYRKN----------------MMAQKVNNTEDTEKTTSN----------- 114
Query: 122 NRNPRTRSSLFVKVKMDGVPIGRKVDLSAHSSYETLAQSLEDMFNEPNTVLTCKVGLNGV 181
T ++ FVKV MDG P RKVDL+ + +Y+ L+ +L MF+ + T G G+
Sbjct: 115 -----TTAAAFVKVSMDGAPYLRKVDLTMYKTYKDLSDALAKMFS---SFTTGNYGAQGM 166
Query: 182 NHGIIAGADRHSKLFD--GSSNFVLTYEDKEGDWMLVGDVPWWMFISSVRRLRIMGTSEA 239
+ SKL D SS +V TYEDK+GDWMLVGDVPW MF+ S +RLRIM SEA
Sbjct: 167 IDFM-----NESKLMDLLNSSEYVPTYEDKDGDWMLVGDVPWEMFVGSCKRLRIMKGSEA 221
Query: 240 NGL 242
GL
Sbjct: 222 IGL 224
>Medtr1g093240.2 | auxin-responsive AUX/IAA family protein | HC |
chr1:33903552-33900946 | 20130731
Length = 239
Score = 115 bits (289), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 73/183 (39%), Positives = 95/183 (51%), Gaps = 42/183 (22%)
Query: 62 SQVVGWPPLRAYRMNSYNSHAKSQVTEVFNSMVENSKANIAVVRKSSDNGSVDNSIIGKE 121
+QVVGWPP+R+YR N M+ N K++ N
Sbjct: 82 AQVVGWPPVRSYRKN----------------MMAQKVNNTEDTEKTTSN----------- 114
Query: 122 NRNPRTRSSLFVKVKMDGVPIGRKVDLSAHSSYETLAQSLEDMFNEPNTVLTCKVGLNGV 181
T ++ FVKV MDG P RKVDL+ + +Y+ L+ +L MF+ + T G G+
Sbjct: 115 -----TTAAAFVKVSMDGAPYLRKVDLTMYKTYKDLSDALAKMFS---SFTTGNYGAQGM 166
Query: 182 NHGIIAGADRHSKLFD--GSSNFVLTYEDKEGDWMLVGDVPWWMFISSVRRLRIMGTSEA 239
+ SKL D SS +V TYEDK+GDWMLVGDVPW MF+ S +RLRIM SEA
Sbjct: 167 IDFM-----NESKLMDLLNSSEYVPTYEDKDGDWMLVGDVPWEMFVGSCKRLRIMKGSEA 221
Query: 240 NGL 242
GL
Sbjct: 222 IGL 224
>Medtr5g067350.1 | auxin response factor | HC |
chr5:28450190-28454050 | 20130731
Length = 347
Score = 115 bits (289), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 74/188 (39%), Positives = 101/188 (53%), Gaps = 42/188 (22%)
Query: 56 TNNAPTSQVVGWPPLRAYRMNSYNSHAKSQVTEVFNSMVENSKANIAVVRKSSDNGSVDN 115
T A +QVVGWPP+R++R NS + +K+ TE + + + A
Sbjct: 189 TAPASKAQVVGWPPIRSFRKNSLTTASKN--TEEVDGKLGSGGA---------------- 230
Query: 116 SIIGKENRNPRTRSSLFVKVKMDGVPIGRKVDLSAHSSYETLAQSLEDMFNEPNTVLTCK 175
+FVKV MDG P RKVDL +++Y L+ SLE MF+ T+ C+
Sbjct: 231 ---------------VFVKVSMDGAPYLRKVDLKNYTAYSELSSSLEKMFS-CFTIGQCE 274
Query: 176 VGLNGVNHG-IIAGADRHSKLFDGSSNFVLTYEDKEGDWMLVGDVPWWMFISSVRRLRIM 234
+HG + + L GS +V+TYEDK+GDWMLVGDVPW MFI + RRLRIM
Sbjct: 275 ------SHGNQMLNETKLRDLLHGS-EYVITYEDKDGDWMLVGDVPWEMFIDTCRRLRIM 327
Query: 235 GTSEANGL 242
+S+A GL
Sbjct: 328 KSSDAIGL 335
>Medtr2g100780.1 | auxin-responsive AUX/IAA family protein | HC |
chr2:43340473-43336605 | 20130731
Length = 269
Score = 115 bits (288), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 69/180 (38%), Positives = 97/180 (53%), Gaps = 27/180 (15%)
Query: 64 VVGWPPLRAYRMNSYNSHAKSQVTEVFNSMVENSKANIAVVRKSSDNGSVDNSIIGKENR 123
VVGWPP+R++R N S + + ++ N++ +K DN GK
Sbjct: 97 VVGWPPIRSFRKNLATSSSSKPSPPESQTQ-QDMHNNVSAGKKPIDNN------YGK--- 146
Query: 124 NPRTRSSLFVKVKMDGVPIGRKVDLSAHSSYETLAQSLEDMFNEPNTVLTCKVGLNGVN- 182
LFVK+ MDGVPIGRKVDL+A+ SY+ L+ +++D+F G N
Sbjct: 147 ------GLFVKINMDGVPIGRKVDLNAYHSYDNLSSAVDDLFRGLLKAQRDSSACGGNNK 200
Query: 183 ----HGIIAGADRHSKLFDGSSNFVLTYEDKEGDWMLVGDVPWWMFISSVRRLRIMGTSE 238
+I G L DGS + L YED EGD MLVGDVPW MF+S+V+RLR++ ++E
Sbjct: 201 KEEEEKVITG------LLDGSGEYTLVYEDNEGDRMLVGDVPWHMFVSTVKRLRVLKSTE 254
>Medtr2g100780.4 | auxin-responsive AUX/IAA family protein | HC |
chr2:43340807-43336605 | 20130731
Length = 269
Score = 115 bits (288), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 69/180 (38%), Positives = 97/180 (53%), Gaps = 27/180 (15%)
Query: 64 VVGWPPLRAYRMNSYNSHAKSQVTEVFNSMVENSKANIAVVRKSSDNGSVDNSIIGKENR 123
VVGWPP+R++R N S + + ++ N++ +K DN GK
Sbjct: 97 VVGWPPIRSFRKNLATSSSSKPSPPESQTQ-QDMHNNVSAGKKPIDNN------YGK--- 146
Query: 124 NPRTRSSLFVKVKMDGVPIGRKVDLSAHSSYETLAQSLEDMFNEPNTVLTCKVGLNGVN- 182
LFVK+ MDGVPIGRKVDL+A+ SY+ L+ +++D+F G N
Sbjct: 147 ------GLFVKINMDGVPIGRKVDLNAYHSYDNLSSAVDDLFRGLLKAQRDSSACGGNNK 200
Query: 183 ----HGIIAGADRHSKLFDGSSNFVLTYEDKEGDWMLVGDVPWWMFISSVRRLRIMGTSE 238
+I G L DGS + L YED EGD MLVGDVPW MF+S+V+RLR++ ++E
Sbjct: 201 KEEEEKVITG------LLDGSGEYTLVYEDNEGDRMLVGDVPWHMFVSTVKRLRVLKSTE 254
>Medtr2g100780.2 | auxin-responsive AUX/IAA family protein | HC |
chr2:43340473-43336605 | 20130731
Length = 269
Score = 115 bits (288), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 69/180 (38%), Positives = 97/180 (53%), Gaps = 27/180 (15%)
Query: 64 VVGWPPLRAYRMNSYNSHAKSQVTEVFNSMVENSKANIAVVRKSSDNGSVDNSIIGKENR 123
VVGWPP+R++R N S + + ++ N++ +K DN GK
Sbjct: 97 VVGWPPIRSFRKNLATSSSSKPSPPESQTQ-QDMHNNVSAGKKPIDNN------YGK--- 146
Query: 124 NPRTRSSLFVKVKMDGVPIGRKVDLSAHSSYETLAQSLEDMFNEPNTVLTCKVGLNGVN- 182
LFVK+ MDGVPIGRKVDL+A+ SY+ L+ +++D+F G N
Sbjct: 147 ------GLFVKINMDGVPIGRKVDLNAYHSYDNLSSAVDDLFRGLLKAQRDSSACGGNNK 200
Query: 183 ----HGIIAGADRHSKLFDGSSNFVLTYEDKEGDWMLVGDVPWWMFISSVRRLRIMGTSE 238
+I G L DGS + L YED EGD MLVGDVPW MF+S+V+RLR++ ++E
Sbjct: 201 KEEEEKVITG------LLDGSGEYTLVYEDNEGDRMLVGDVPWHMFVSTVKRLRVLKSTE 254
>Medtr8g067530.1 | auxin-responsive AUX/IAA family protein | HC |
chr8:28204029-28199991 | 20130731
Length = 356
Score = 115 bits (288), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 76/193 (39%), Positives = 103/193 (53%), Gaps = 46/193 (23%)
Query: 55 LTNNAPTS--QVVGWPPLRAYRMNSYNSHAKSQVTEVFNSMVENSKANIAVVRKSSDNGS 112
++ +AP + QVVGWPP+R++R NS + +K +N
Sbjct: 193 ISGSAPAAKAQVVGWPPIRSFRKNSLATTSK-------------------------NNDE 227
Query: 113 VDNSIIGKENRNPRTRSSLFVKVKMDGVPIGRKVDLSAHSSYETLAQSLEDMFNEPNTVL 172
VD GK ++LFVKV MDG P RKVDL +++Y+ L+ LE MF
Sbjct: 228 VD----GKPGA-----AALFVKVSMDGAPYLRKVDLRNYTTYQELSSDLEKMF------- 271
Query: 173 TC-KVGLNGVNHGIIAGADRHSKL--FDGSSNFVLTYEDKEGDWMLVGDVPWWMFISSVR 229
+C +G G + G SKL F S +V+TYEDK+GDWMLVGDVPW MFI + +
Sbjct: 272 SCFTLGQCGSHGGPGKEMLSESKLKDFLHGSEYVVTYEDKDGDWMLVGDVPWDMFIDTCK 331
Query: 230 RLRIMGTSEANGL 242
RL+IM S+A GL
Sbjct: 332 RLKIMKGSDAIGL 344
>Medtr2g100780.3 | auxin-responsive AUX/IAA family protein | HC |
chr2:43340462-43336605 | 20130731
Length = 268
Score = 114 bits (286), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 69/180 (38%), Positives = 97/180 (53%), Gaps = 27/180 (15%)
Query: 64 VVGWPPLRAYRMNSYNSHAKSQVTEVFNSMVENSKANIAVVRKSSDNGSVDNSIIGKENR 123
VVGWPP+R++R N S + + ++ N++ +K DN GK
Sbjct: 97 VVGWPPIRSFRKNLATSSSSKPSPPESQTQ-QDMHNNVSAGKKPIDNN------YGK--- 146
Query: 124 NPRTRSSLFVKVKMDGVPIGRKVDLSAHSSYETLAQSLEDMFNEPNTVLTCKVGLNGVN- 182
LFVK+ MDGVPIGRKVDL+A+ SY+ L+ +++D+F G N
Sbjct: 147 ------GLFVKINMDGVPIGRKVDLNAYHSYDNLSSAVDDLFRGLLKAQRDSSACGGNNK 200
Query: 183 ----HGIIAGADRHSKLFDGSSNFVLTYEDKEGDWMLVGDVPWWMFISSVRRLRIMGTSE 238
+I G L DGS + L YED EGD MLVGDVPW MF+S+V+RLR++ ++E
Sbjct: 201 KEEEEKVITG------LLDGSGEYTLVYEDNEGDRMLVGDVPWHMFVSTVKRLRVLKSTE 254
>Medtr8g103030.1 | auxin-responsive AUX/IAA family protein | HC |
chr8:43394828-43391289 | 20130731
Length = 293
Score = 114 bits (286), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 74/183 (40%), Positives = 93/183 (50%), Gaps = 42/183 (22%)
Query: 62 SQVVGWPPLRAYRMNSYNSHAKSQVTEVFNSMVENSKANIAVVRKSSDNGSVDNSIIGKE 121
+QVVGWPP+R++R NS MV + N A S+
Sbjct: 139 AQVVGWPPIRSFRKNS---------------MVSQPQKNDADAEAKSE------------ 171
Query: 122 NRNPRTRSSLFVKVKMDGVPIGRKVDLSAHSSYETLAQSLEDMFNEPNTVLTCKVGLNGV 181
L+VKV M+G P RKVDL+ SSY L+ +LE MF+ + G GV
Sbjct: 172 --------CLYVKVSMEGAPYLRKVDLNGFSSYRELSSALEKMFS---CFTISQCGSYGV 220
Query: 182 NHGIIAGADRHSKLFD--GSSNFVLTYEDKEGDWMLVGDVPWWMFISSVRRLRIMGTSEA 239
+ S+L D S +VLTYEDK+GDWMLVGDVPW MF S +RLRIM +SEA
Sbjct: 221 S--CREKNLSESRLVDLLHGSEYVLTYEDKDGDWMLVGDVPWEMFTESCKRLRIMKSSEA 278
Query: 240 NGL 242
GL
Sbjct: 279 IGL 281
>Medtr8g014520.1 | auxin response factor | HC | chr8:4572622-4568904
| 20130731
Length = 271
Score = 113 bits (283), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 69/178 (38%), Positives = 97/178 (54%), Gaps = 22/178 (12%)
Query: 61 TSQVVGWPPLRAYRMNSYNSHAKSQVTEVFNSMVENSKANIAVVRKSSDNGSVDNSIIGK 120
S VVGWPP+R++R N + + TE MV++ V+ S N + NS G
Sbjct: 105 ASPVVGWPPIRSFRKNIASGSSSKPPTES-RPMVQD-----KVIVDS--NKPISNSGKG- 155
Query: 121 ENRNPRTRSSLFVKVKMDGVPIGRKVDLSAHSSYETLAQSLEDMFNEPNTVLTCKVGLNG 180
LFVK+ MDGVPIGRK+D++A+ SYE L+ +++D+F + G+N
Sbjct: 156 ----------LFVKINMDGVPIGRKIDINAYDSYEKLSSAVDDLFRGLLEEINLSHGINK 205
Query: 181 VNHGIIAGADRHSKLFDGSSNFVLTYEDKEGDWMLVGDVPWWMFISSVRRLRIMGTSE 238
G GS + L YED EGD MLVGDVPW MF+S+V+RLR+ +S+
Sbjct: 206 KQEEEDTGMKGS---LTGSGEYTLVYEDNEGDKMLVGDVPWHMFVSTVKRLRVSKSSD 260
>Medtr8g014520.2 | auxin response factor | HC | chr8:4572622-4568904
| 20130731
Length = 268
Score = 113 bits (283), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 69/178 (38%), Positives = 97/178 (54%), Gaps = 22/178 (12%)
Query: 61 TSQVVGWPPLRAYRMNSYNSHAKSQVTEVFNSMVENSKANIAVVRKSSDNGSVDNSIIGK 120
S VVGWPP+R++R N + + TE MV++ V+ S N + NS G
Sbjct: 105 ASPVVGWPPIRSFRKNIASGSSSKPPTES-RPMVQD-----KVIVDS--NKPISNSGKG- 155
Query: 121 ENRNPRTRSSLFVKVKMDGVPIGRKVDLSAHSSYETLAQSLEDMFNEPNTVLTCKVGLNG 180
LFVK+ MDGVPIGRK+D++A+ SYE L+ +++D+F + G+N
Sbjct: 156 ----------LFVKINMDGVPIGRKIDINAYDSYEKLSSAVDDLFRGLLEEINLSHGINK 205
Query: 181 VNHGIIAGADRHSKLFDGSSNFVLTYEDKEGDWMLVGDVPWWMFISSVRRLRIMGTSE 238
G GS + L YED EGD MLVGDVPW MF+S+V+RLR+ +S+
Sbjct: 206 KQEEEDTGMKGS---LTGSGEYTLVYEDNEGDKMLVGDVPWHMFVSTVKRLRVSKSSD 260
>Medtr2g101500.1 | auxin-responsive AUX/IAA family protein | HC |
chr2:43637105-43634220 | 20130731
Length = 326
Score = 112 bits (279), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 76/192 (39%), Positives = 97/192 (50%), Gaps = 49/192 (25%)
Query: 58 NAPTS--QVVGWPPLRAYRMNSYNSHAKSQVTEVFNSMVENSKANIAVVRKSSDNGSVDN 115
NAP + QVVGWPP+R++R N+ S+ + K++D
Sbjct: 165 NAPAAKAQVVGWPPIRSFRKNTMASN----------------------LTKNND------ 196
Query: 116 SIIGKENRNPRTRSSLFVKVKMDGVPIGRKVDLSAHSSYETLAQSLEDMFNEPNTVLTCK 175
E L+VKV MDG P RKVDL +++Y L+ +LE MF TC
Sbjct: 197 -----EAEGKPEFDCLYVKVSMDGAPYLRKVDLKTYNNYMELSSALEKMF-------TC- 243
Query: 176 VGLNGVNHGIIAGADRHSK-----LFDGSSNFVLTYEDKEGDWMLVGDVPWWMFISSVRR 230
+ N + G D S+ L GS +VLTYEDK+GDWMLVGDVPW MF S RR
Sbjct: 244 FTIGQCNSPGLPGKDGLSESSLRDLLHGSE-YVLTYEDKDGDWMLVGDVPWGMFADSCRR 302
Query: 231 LRIMGTSEANGL 242
LRIM S+A GL
Sbjct: 303 LRIMKGSDAIGL 314
>Medtr1g070830.1 | auxin-responsive AUX/IAA family protein | HC |
chr1:31369872-31371491 | 20130731
Length = 204
Score = 111 bits (278), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 70/188 (37%), Positives = 87/188 (46%), Gaps = 64/188 (34%)
Query: 57 NNAPTS--QVVGWPPLRAYRMNSYNSHAKSQVTEVFNSMVENSKANIAVVRKSSDNGSVD 114
+NAP S QVVGWPP+R+YR NS +V
Sbjct: 76 DNAPPSKAQVVGWPPIRSYRKNSLQQKKGEEV---------------------------- 107
Query: 115 NSIIGKENRNPRTRSSLFVKVKMDGVPIGRKVDLSAHSSYETLAQSLEDMFNEPNTVLTC 174
+++KV M G P RK+DL + SY L + LE+MF C
Sbjct: 108 ---------------GMYLKVSMAGAPYLRKIDLKVYKSYSELLKVLENMFK-------C 145
Query: 175 KVGLNGVNHGIIAGADRHSKLFDGSSNFVLTYEDKEGDWMLVGDVPWWMFISSVRRLRIM 234
+G G ++GS FV TYEDK+GDWMLVGDVPW MF+SS +RLRIM
Sbjct: 146 TIGEYSEREG-----------YNGSE-FVPTYEDKDGDWMLVGDVPWEMFMSSCKRLRIM 193
Query: 235 GTSEANGL 242
SEA GL
Sbjct: 194 KGSEAKGL 201
>Medtr7g096090.1 | auxin-responsive AUX/IAA family protein | HC |
chr7:38527122-38532646 | 20130731
Length = 250
Score = 104 bits (260), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 69/186 (37%), Positives = 89/186 (47%), Gaps = 50/186 (26%)
Query: 62 SQVVGWPPLRAYRMNSYNSHAKSQVTEV---FNSMVENSKANIAVVRKSSDNGSVDNSII 118
+QVVGWPP+R+YR N FN++
Sbjct: 98 AQVVGWPPVRSYRKNMLAMQKSESEKNSSSNFNAIT------------------------ 133
Query: 119 GKENRNPRTRSSLFVKVKMDGVPIGRKVDLSAHSSYETLAQSLEDMFNEPNTVLTCKVGL 178
FVKV MDG P RKVDL ++SY L+ SL MF+ T+ C+
Sbjct: 134 -------------FVKVSMDGAPYLRKVDLKMYTSYSQLSDSLGKMFSS-FTIGNCES-- 177
Query: 179 NGVNHGIIAGADRHSKLFD--GSSNFVLTYEDKEGDWMLVGDVPWWMFISSVRRLRIMGT 236
G+ + SKL D +S++V TYEDK+GDWMLVGDVPW MF+ S +RLRIM
Sbjct: 178 QGMKDFM-----NESKLMDLLNNSDYVPTYEDKDGDWMLVGDVPWEMFVESCKRLRIMKG 232
Query: 237 SEANGL 242
EA G+
Sbjct: 233 KEAIGI 238
>Medtr1g076270.1 | auxin response factor | HC |
chr1:33944737-33945503 | 20130731
Length = 178
Score = 98.6 bits (244), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 62/186 (33%), Positives = 85/186 (45%), Gaps = 66/186 (35%)
Query: 59 APTSQ--VVGWPPLRAYRMNSYNSHAKSQVTEVFNSMVENSKANIAVVRKSSDNGSVDNS 116
AP S+ +VGWPP+R+YR NS ++ ++A
Sbjct: 57 APPSKAKIVGWPPIRSYRKNS----------------LQEAEA----------------- 83
Query: 117 IIGKENRNPRTRSSLFVKVKMDGVPIGRKVDLSAHSSYETLAQSLEDMFNEPNTVLTCKV 176
S ++VKV +DG P RK+DL + Y L ++LE MF + K
Sbjct: 84 ------------SGIYVKVSLDGAPYLRKIDLRVYGGYAQLLKALESMFKLTIGNYSEKE 131
Query: 177 GLNGVNHGIIAGADRHSKLFDGSSNFVLTYEDKEGDWMLVGDVPWWMFISSVRRLRIMGT 236
G G S + TYEDK+GDWMLVGDVPW MF++S +RLRIM
Sbjct: 132 GYKG-------------------SEYEPTYEDKDGDWMLVGDVPWEMFVTSCKRLRIMKG 172
Query: 237 SEANGL 242
+EA G+
Sbjct: 173 TEARGV 178
>Medtr1g093350.1 | auxin response factor | HC |
chr1:33849453-33847986 | 20130731
Length = 178
Score = 98.6 bits (244), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 62/186 (33%), Positives = 85/186 (45%), Gaps = 66/186 (35%)
Query: 59 APTSQ--VVGWPPLRAYRMNSYNSHAKSQVTEVFNSMVENSKANIAVVRKSSDNGSVDNS 116
AP S+ +VGWPP+R+YR NS ++ ++A
Sbjct: 57 APPSKAKIVGWPPIRSYRKNS----------------LQEAEA----------------- 83
Query: 117 IIGKENRNPRTRSSLFVKVKMDGVPIGRKVDLSAHSSYETLAQSLEDMFNEPNTVLTCKV 176
S ++VKV +DG P RK+DL + Y L ++LE MF + K
Sbjct: 84 ------------SGIYVKVSLDGAPYLRKIDLRVYGGYAQLLKALESMFKLTIGNYSEKE 131
Query: 177 GLNGVNHGIIAGADRHSKLFDGSSNFVLTYEDKEGDWMLVGDVPWWMFISSVRRLRIMGT 236
G G S + TYEDK+GDWMLVGDVPW MF++S +RLRIM
Sbjct: 132 GYKG-------------------SEYEPTYEDKDGDWMLVGDVPWEMFVTSCKRLRIMKG 172
Query: 237 SEANGL 242
+EA G+
Sbjct: 173 TEARGV 178
>Medtr1g040675.1 | auxin response factor | HC |
chr1:15063378-15065770 | 20130731
Length = 186
Score = 97.8 bits (242), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 60/181 (33%), Positives = 80/181 (44%), Gaps = 64/181 (35%)
Query: 62 SQVVGWPPLRAYRMNSYNSHAKSQVTEVFNSMVENSKANIAVVRKSSDNGSVDNSIIGKE 121
+++VGWPP+R+YR N+ Q EV
Sbjct: 66 AKIVGWPPIRSYRKNTL------QEAEV-------------------------------- 87
Query: 122 NRNPRTRSSLFVKVKMDGVPIGRKVDLSAHSSYETLAQSLEDMFNEPNTVLTCKVGLNGV 181
++VKV MDG P RK+DL + Y L ++LE MF + + G G
Sbjct: 88 -------GGIYVKVSMDGAPYLRKIDLRIYGGYPELLKALETMFKLTIGEYSEREGYKG- 139
Query: 182 NHGIIAGADRHSKLFDGSSNFVLTYEDKEGDWMLVGDVPWWMFISSVRRLRIMGTSEANG 241
S + TYEDK+GDWMLVGDVPW MF++S +RLRIM +EA G
Sbjct: 140 ------------------SEYAPTYEDKDGDWMLVGDVPWDMFVTSCKRLRIMKGTEARG 181
Query: 242 L 242
L
Sbjct: 182 L 182
>Medtr4g124300.1 | auxin-responsive AUX/IAA family protein | HC |
chr4:51327848-51326632 | 20130731
Length = 184
Score = 95.9 bits (237), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 50/108 (46%), Positives = 68/108 (62%), Gaps = 19/108 (17%)
Query: 126 RTRSSLFVKVKMDGVPIGRKVDLSAHSSYETLAQSLEDMFNEPNTVLTCKVGLNGVNHGI 185
+ R SLFVKV M+G+PIGRK++L H SY+ L ++L MF T + C
Sbjct: 90 KQRPSLFVKVYMEGIPIGRKLNLLEHHSYDGLIKALCHMFR---TTILCP---------- 136
Query: 186 IAGADRHSKLFDGSSNFVLTYEDKEGDWMLVGDVPWWMFISSVRRLRI 233
+S+ + + VLTYED+EGDWM+VGDVPW MF+SSV+RL+I
Sbjct: 137 ------NSQPLNSWNFHVLTYEDQEGDWMMVGDVPWEMFLSSVKRLKI 178
>Medtr1g093240.3 | auxin-responsive AUX/IAA family protein | HC |
chr1:33903407-33900363 | 20130731
Length = 204
Score = 92.8 bits (229), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 60/162 (37%), Positives = 80/162 (49%), Gaps = 42/162 (25%)
Query: 62 SQVVGWPPLRAYRMNSYNSHAKSQVTEVFNSMVENSKANIAVVRKSSDNGSVDNSIIGKE 121
+QVVGWPP+R+YR N M+ N K++ N
Sbjct: 82 AQVVGWPPVRSYRKN----------------MMAQKVNNTEDTEKTTSN----------- 114
Query: 122 NRNPRTRSSLFVKVKMDGVPIGRKVDLSAHSSYETLAQSLEDMFNEPNTVLTCKVGLNGV 181
T ++ FVKV MDG P RKVDL+ + +Y+ L+ +L MF+ + T G G+
Sbjct: 115 -----TTAAAFVKVSMDGAPYLRKVDLTMYKTYKDLSDALAKMFS---SFTTGNYGAQGM 166
Query: 182 NHGIIAGADRHSKLFD--GSSNFVLTYEDKEGDWMLVGDVPW 221
+ SKL D SS +V TYEDK+GDWMLVGDVPW
Sbjct: 167 IDFM-----NESKLMDLLNSSEYVPTYEDKDGDWMLVGDVPW 203
>Medtr1g085750.1 | auxin-responsive AUX/IAA family protein | HC |
chr1:38333347-38334717 | 20130731
Length = 176
Score = 89.0 bits (219), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 49/115 (42%), Positives = 66/115 (57%), Gaps = 18/115 (15%)
Query: 119 GKENRNPRTRSSLFVKVKMDGVPIGRKVDLSAHSSYETLAQSLEDMFNEPNTVLTCKVGL 178
G+ N S+ FVKV M+G+PIGRK++L AH+ Y L +LE MF+ T + +
Sbjct: 72 GEVNDCSDYNSAFFVKVYMEGIPIGRKLNLLAHNGYHELVNTLEQMFD---TTILWGTEM 128
Query: 179 NGVNHGIIAGADRHSKLFDGSSNFVLTYEDKEGDWMLVGDVPWWMFISSVRRLRI 233
+GV VLTYED EGD ++VGDVPW MF+SSV+RL+I
Sbjct: 129 DGVQ---------------SERCHVLTYEDGEGDLIMVGDVPWEMFLSSVKRLKI 168
>Medtr7g110790.1 | auxin-responsive AUX/IAA family protein | HC |
chr7:45409781-45408778 | 20130731
Length = 161
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 46/104 (44%), Positives = 65/104 (62%), Gaps = 18/104 (17%)
Query: 130 SLFVKVKMDGVPIGRKVDLSAHSSYETLAQSLEDMFNEPNTVLTCKVGLNGVNHGIIAGA 189
SL+VKV M+G+PIGRK+++ AH SY L ++LE MF+ T + ++GV
Sbjct: 68 SLYVKVYMEGIPIGRKLNILAHQSYHELVKTLEHMFD---TTILWGNEMDGVQ------- 117
Query: 190 DRHSKLFDGSSNFVLTYEDKEGDWMLVGDVPWWMFISSVRRLRI 233
VLTYED+EGD ++VGDVPW MF+S+V+RL+I
Sbjct: 118 --------PERCHVLTYEDEEGDLVMVGDVPWEMFLSTVKRLKI 153
>Medtr4g011880.1 | auxin-responsive AUX/IAA family protein | HC |
chr4:3041610-3037433 | 20130731
Length = 178
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 60/182 (32%), Positives = 77/182 (42%), Gaps = 67/182 (36%)
Query: 61 TSQVVGWPPLRAYRMNSYNSHAKSQVTEVFNSMVENSKANIAVVRKSSDNGSVDNSIIGK 120
+QVVGWPP+ +YR + N +K
Sbjct: 52 KNQVVGWPPVCSYRKKNMNEGSK------------------------------------- 74
Query: 121 ENRNPRTRSSLFVKVKMDGVPIGRKVDLSAHSSYETLAQSLEDMFNEPNTVLTCKVGLNG 180
+++KV MDG P RK+DL H Y LA +LE +F G G
Sbjct: 75 ----------MYMKVSMDGAPYLRKIDLGLHKGYLELALALEKLF-----------GCCG 113
Query: 181 VNHGIIAGADRHSKLFDGSSNFVLTYEDKEGDWMLVGDVPWWMFISSVRRLRIMGTSEAN 240
+ + AD + V YEDK+GDWMLVGDVPW MFI S +RLRIM S+A
Sbjct: 114 IEEAL-KDAD--------NCEHVPIYEDKDGDWMLVGDVPWEMFIESCKRLRIMKRSDAK 164
Query: 241 GL 242
G
Sbjct: 165 GF 166
>Medtr2g102490.1 | auxin-responsive AUX/IAA family protein | HC |
chr2:44155116-44156253 | 20130731
Length = 198
Score = 81.3 bits (199), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 44/112 (39%), Positives = 61/112 (54%), Gaps = 16/112 (14%)
Query: 132 FVKVKMDGVPIGRKVDLSAHSSYETLAQSLEDMFNEPNTVLTCKVGLNGVNHGIIAGADR 191
+VKV +DG P RKVDL + Y+ L +L MF+ C N + +
Sbjct: 88 YVKVAVDGAPYLRKVDLEVYECYDNLLTALNTMFST-----NCFTIRNDLMN-------- 134
Query: 192 HSKLFDGSSN---FVLTYEDKEGDWMLVGDVPWWMFISSVRRLRIMGTSEAN 240
K D N ++ TYEDK+GDWML+GDVPW MF+ S +R+R+M +S N
Sbjct: 135 EKKFMDSRKNTNEYLATYEDKDGDWMLLGDVPWKMFVESCKRIRLMISSGDN 186
>Medtr3g106850.1 | auxin-responsive AUX/IAA family protein | HC |
chr3:49381656-49382979 | 20130731
Length = 213
Score = 78.2 bits (191), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 51/184 (27%), Positives = 89/184 (48%), Gaps = 54/184 (29%)
Query: 56 TNNAPTSQVVGWPPLRAYRMNSYNSHAKSQVTEVFNSMVENSKANIAVVRKSSDNGSVDN 115
+NN + +VGWPP++++R ++ Q+ E +RK++
Sbjct: 81 SNNEGENHLVGWPPIKSWRKKEFHDQ---QLPEH--------------IRKAN------- 116
Query: 116 SIIGKENRNPRTRSSLFVKVKMDGVPIGRKVDLSAHSSYETLAQSLEDMFNEPNTVLTCK 175
EN+N R++ L+VKV M+GV +GR+++L ++SY+TL SL MF + C+
Sbjct: 117 -----ENQNRRSKP-LYVKVNMEGVGMGRQINLRLYNSYQTLKDSLISMF------VKCQ 164
Query: 176 VGLNGVNHGIIAGADRHSKLFDGSSNFVLTYEDKEGDWMLVGDVPWWMFISSVRRLRIMG 235
+ +N+ LT+++K+G+W L + W FI +VRRL I+
Sbjct: 165 ------------------NFEETGANYTLTFQNKQGEWKLTSHITWQSFIGTVRRLAILR 206
Query: 236 TSEA 239
E
Sbjct: 207 NGEC 210
>Medtr1g040675.2 | auxin response factor | HC |
chr1:15063472-15065737 | 20130731
Length = 162
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 48/160 (30%), Positives = 64/160 (40%), Gaps = 64/160 (40%)
Query: 62 SQVVGWPPLRAYRMNSYNSHAKSQVTEVFNSMVENSKANIAVVRKSSDNGSVDNSIIGKE 121
+++VGWPP+R+YR N+ Q EV
Sbjct: 66 AKIVGWPPIRSYRKNTL------QEAEV-------------------------------- 87
Query: 122 NRNPRTRSSLFVKVKMDGVPIGRKVDLSAHSSYETLAQSLEDMFNEPNTVLTCKVGLNGV 181
++VKV MDG P RK+DL + Y L ++LE MF + + G G
Sbjct: 88 -------GGIYVKVSMDGAPYLRKIDLRIYGGYPELLKALETMFKLTIGEYSEREGYKG- 139
Query: 182 NHGIIAGADRHSKLFDGSSNFVLTYEDKEGDWMLVGDVPW 221
S + TYEDK+GDWMLVGDVPW
Sbjct: 140 ------------------SEYAPTYEDKDGDWMLVGDVPW 161
>Medtr4g115075.1 | auxin-responsive AUX/IAA family protein | HC |
chr4:47460828-47458972 | 20130731
Length = 208
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 37/105 (35%), Positives = 51/105 (48%), Gaps = 27/105 (25%)
Query: 132 FVKVKMDGVPIGRKVDLSAHSSYETLAQSLEDMFNEPNTVLTCKVGLNGVNHGIIAGADR 191
+VKVKM+GV I RKV+L H S+ TL Q+L DMF
Sbjct: 129 YVKVKMEGVGIARKVNLGMHHSFHTLNQTLMDMF-------------------------- 162
Query: 192 HSKLFDGSSNFVLTYEDKEGDWMLVGDVPWWMFISSVRRLRIMGT 236
K + L Y+DKEGDW+L D+ W FI +RL+++ +
Sbjct: 163 -EKCDHDQQQYELVYQDKEGDWLLAQDISWRSFIECAQRLKLLKS 206
>Medtr1g085750.2 | auxin-responsive AUX/IAA family protein | HC |
chr1:38333347-38334717 | 20130731
Length = 157
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 42/103 (40%), Positives = 58/103 (56%), Gaps = 18/103 (17%)
Query: 119 GKENRNPRTRSSLFVKVKMDGVPIGRKVDLSAHSSYETLAQSLEDMFNEPNTVLTCKVGL 178
G+ N S+ FVKV M+G+PIGRK++L AH+ Y L +LE MF +T + +
Sbjct: 72 GEVNDCSDYNSAFFVKVYMEGIPIGRKLNLLAHNGYHELVNTLEQMF---DTTILWGTEM 128
Query: 179 NGVNHGIIAGADRHSKLFDGSSNFVLTYEDKEGDWMLVGDVPW 221
+GV ++R VLTYED EGD ++VGDVPW
Sbjct: 129 DGVQ------SER---------CHVLTYEDGEGDLIMVGDVPW 156
>Medtr1g109510.1 | auxin-responsive AUX/IAA family protein | HC |
chr1:49537832-49539058 | 20130731
Length = 178
Score = 72.0 bits (175), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 41/109 (37%), Positives = 57/109 (52%), Gaps = 20/109 (18%)
Query: 132 FVKVKMDGVPIGRKVDLSAHSSYETLAQSLEDMFNEPNTVLTCKVGLNGVNHGIIAGADR 191
+VKV MDGV IGRK+ + H Y +LA LEDMF + ++G+
Sbjct: 85 YVKVNMDGVSIGRKICILDHGGYSSLAIQLEDMFGSQS--------VSGI---------- 126
Query: 192 HSKLFDGSSNFVLTYEDKEGDWMLVGDVPWWMFISSVRRLRIMGTSEAN 240
+LF+ S + L Y+D E +W VGDV W F+ V+RLRI + N
Sbjct: 127 --RLFESGSEYSLFYKDSEDNWRTVGDVLWKEFVECVKRLRIARKNAGN 173
>Medtr2g005240.1 | auxin response factor 2 | HC | chr2:92911-103331
| 20130731
Length = 671
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 39/126 (30%), Positives = 57/126 (45%), Gaps = 26/126 (20%)
Query: 120 KENRNPRTRSSLFVKVKMDGVPIGRKVDLSAHSSYETLAQSLEDMFNEPNTVLTCKVGLN 179
+E+++ + RS KV M G+ +GR VDL+ YE L + LE+MF
Sbjct: 539 QESQSRQIRSC--TKVHMQGMAVGRAVDLTRFDGYEDLLRKLEEMF-------------- 582
Query: 180 GVNHGIIAGADRHSKLFDGSSNFVLTYEDKEGDWMLVGDVPWWMFISSVRRLRIMGTSEA 239
D +L + +++ Y D E D M+VGD PW F S VR++ I E
Sbjct: 583 ----------DIEGELCGATKKWLVVYTDNEDDMMMVGDDPWLEFCSVVRKMFIYTPEEV 632
Query: 240 NGLDWK 245
L K
Sbjct: 633 KKLSPK 638
>Medtr4g128070.1 | auxin-responsive AUX/IAA family protein | HC |
chr4:53308708-53310353 | 20130731
Length = 173
Score = 58.2 bits (139), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 32/102 (31%), Positives = 50/102 (49%), Gaps = 14/102 (13%)
Query: 133 VKVKMDGVPIGRKVDLSAHSSYETLAQSLEDMFNEPNTVLTCKVGLNGVNHGIIAGADRH 192
V V ++G I +++ L H SY++LA++L MF + C G D H
Sbjct: 70 VTVVLEGRSICQRISLHNHGSYQSLAKALRQMF--VDCTDDCDAG------------DHH 115
Query: 193 SKLFDGSSNFVLTYEDKEGDWMLVGDVPWWMFISSVRRLRIM 234
L + V+ YED E D +L GD+ W F+ +R+RI+
Sbjct: 116 LDLSNAIPGHVIAYEDMENDLLLAGDLTWKDFVRVAKRIRIL 157
>Medtr4g021580.1 | auxin response factor 2 | HC |
chr4:7078271-7072794 | 20130731
Length = 667
Score = 58.2 bits (139), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 37/123 (30%), Positives = 58/123 (47%), Gaps = 25/123 (20%)
Query: 120 KENRNPRTRSSLFVKVKMDGVPIGRKVDLSAHSSYETLAQSLEDMFNEPNTVLTCKVGLN 179
KE ++ + S KV+M GV +GR VDL+ + Y+ L LE++F+
Sbjct: 545 KETQSKQICSRSRTKVQMQGVAVGRAVDLATLNGYDQLIGELEELFD------------- 591
Query: 180 GVNHGIIAGADRHSKLFDGSSNFVLTYEDKEGDWMLVGDVPWWMFISSVRRLRIMGTSEA 239
I G +H ++ + + D EGD MLVGD PW F + VRR+ I + +
Sbjct: 592 ------IKGQLQHRNTWE------IVFTDDEGDMMLVGDDPWPEFCNMVRRIFICSSQDV 639
Query: 240 NGL 242
+
Sbjct: 640 KKM 642
>Medtr5g067350.2 | auxin response factor | HC |
chr5:28450190-28454050 | 20130731
Length = 272
Score = 57.8 bits (138), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 38/111 (34%), Positives = 54/111 (48%), Gaps = 33/111 (29%)
Query: 56 TNNAPTSQVVGWPPLRAYRMNSYNSHAKSQVTEVFNSMVENSKANIAVVRKSSDNGSVDN 115
T A +QVVGWPP+R++R NS + +K+ TE VD
Sbjct: 189 TAPASKAQVVGWPPIRSFRKNSLTTASKN--TE-----------------------EVDG 223
Query: 116 SIIGKENRNPRTRSSLFVKVKMDGVPIGRKVDLSAHSSYETLAQSLEDMFN 166
+ + ++FVKV MDG P RKVDL +++Y L+ SLE MF+
Sbjct: 224 KL--------GSGGAVFVKVSMDGAPYLRKVDLKNYTAYSELSSSLEKMFS 266
>Medtr6g488150.2 | auxin response factor | HC |
chr6:33216341-33219347 | 20130731
Length = 193
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 35/112 (31%), Positives = 51/112 (45%), Gaps = 34/112 (30%)
Query: 55 LTNNAPTSQVVGWPPLRAYRMNSYNSHAKSQVTEVFNSMVENSKANIAVVRKSSDNGSVD 114
++ +A QVVGWPP+R++R NS +A + +DN V+
Sbjct: 93 ISGSAAKEQVVGWPPIRSFRKNS-----------------------MATQSQKNDNDDVE 129
Query: 115 NSIIGKENRNPRTRSSLFVKVKMDGVPIGRKVDLSAHSSYETLAQSLEDMFN 166
L+VKV MDG P RKVDL +Y+ L+ +LE MF+
Sbjct: 130 -----------AKSGCLYVKVSMDGAPYLRKVDLKIFGTYKELSSALEKMFS 170
>Medtr8g100050.1 | auxin response factor 2 | HC |
chr8:40230869-40235830 | 20130731
Length = 833
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/106 (29%), Positives = 46/106 (43%), Gaps = 24/106 (22%)
Query: 133 VKVKMDGVPIGRKVDLSAHSSYETLAQSLEDMFNEPNTVLTCKVGLNGVNHGIIAGADRH 192
KV G+ +GR VDL+ S Y+ L L+ +F +
Sbjct: 713 TKVHKKGIALGRSVDLTKFSDYDELTAELDQLF------------------------EFR 748
Query: 193 SKLFDGSSNFVLTYEDKEGDWMLVGDVPWWMFISSVRRLRIMGTSE 238
+L ++++ + D EGD MLVGD PW F S VR++ I E
Sbjct: 749 GELISPQKDWLVVFTDNEGDMMLVGDDPWQEFCSMVRKIYIYPKEE 794
>Medtr4g124300.2 | auxin-responsive AUX/IAA family protein | HC |
chr4:51327848-51327301 | 20130731
Length = 139
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 25/50 (50%), Positives = 34/50 (68%), Gaps = 3/50 (6%)
Query: 126 RTRSSLFVKVKMDGVPIGRKVDLSAHSSYETLAQSLEDMFNEPNTVLTCK 175
+ R SLFVKV M+G+PIGRK++L H SY+ L ++L MF T + CK
Sbjct: 90 KQRPSLFVKVYMEGIPIGRKLNLLEHHSYDGLIKALCHMF---RTTILCK 136
>Medtr1g024025.1 | auxin response factor 2 | LC |
chr1:7778460-7771119 | 20130731
Length = 1265
Score = 52.0 bits (123), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 34/111 (30%), Positives = 53/111 (47%), Gaps = 24/111 (21%)
Query: 132 FVKVKMDGVPIGRKVDLSAHSSYETLAQSLEDMFNEPNTVLTCKVGLNGVNHGIIAGADR 191
+ KV+ G +GR +D++ +YE L +++E MF GL+G+ +
Sbjct: 756 YTKVQKAGS-VGRSIDVTTFKNYEELIRAIECMF-----------GLDGLLNDT------ 797
Query: 192 HSKLFDGSSNFVLTYEDKEGDWMLVGDVPWWMFISSVRRLRIMGTSEANGL 242
S + L Y D E D +LVGD PW F+ VR +RI+ SE +
Sbjct: 798 ------KGSGWKLVYVDYESDVLLVGDDPWEEFVGCVRCIRILSPSEVKEM 842
>Medtr4g021580.2 | auxin response factor 2 | HC |
chr4:7078271-7072794 | 20130731
Length = 622
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/102 (31%), Positives = 48/102 (47%), Gaps = 25/102 (24%)
Query: 120 KENRNPRTRSSLFVKVKMDGVPIGRKVDLSAHSSYETLAQSLEDMFNEPNTVLTCKVGLN 179
KE ++ + S KV+M GV +GR VDL+ + Y+ L LE++F+
Sbjct: 545 KETQSKQICSRSRTKVQMQGVAVGRAVDLATLNGYDQLIGELEELFD------------- 591
Query: 180 GVNHGIIAGADRHSKLFDGSSNFVLTYEDKEGDWMLVGDVPW 221
I G +H ++ + + D EGD MLVGD PW
Sbjct: 592 ------IKGQLQHRNTWE------IVFTDDEGDMMLVGDDPW 621
>Medtr2g018690.1 | auxin response factor 2 | HC |
chr2:5912688-5906356 | 20130731
Length = 908
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 45/168 (26%), Positives = 73/168 (43%), Gaps = 28/168 (16%)
Query: 76 NSYNSHAKSQVTEVFNSMVENSKANIAVVRKSSDNGSVDNSIIGKENRNPRTRSSLFVKV 135
N ++ + Q + N+ +S N V ++G + G++ NP ++ FVKV
Sbjct: 723 NDSSTMSYHQSSSYMNTAGADSSLNHGVTPSIGESGFLHTQENGEQGNNPLNKT--FVKV 780
Query: 136 KMDGVPIGRKVDLSAHSSYETLAQSLEDMFNEPNTVLTCKVGLNGVNHGIIAGADRHSKL 195
G GR +D++ SSY L L MF GL G +L
Sbjct: 781 YKSGS-FGRSLDITKFSSYNELRSELARMF-----------GLEG-------------EL 815
Query: 196 FDG-SSNFVLTYEDKEGDWMLVGDVPWWMFISSVRRLRIMGTSEANGL 242
D S + L + D+E D +L+GD PW F++SV ++I+ E +
Sbjct: 816 EDPVRSGWQLVFVDRENDVLLLGDGPWPEFVNSVWCIKILSPEEVQQM 863
>Medtr4g124900.2 | auxin response factor 2 | HC |
chr4:51795315-51802487 | 20130731
Length = 1097
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 34/123 (27%), Positives = 59/123 (47%), Gaps = 26/123 (21%)
Query: 120 KENRNPRTRSSLFVKVKMDGVPIGRKVDLSAHSSYETLAQSLEDMFNEPNTVLTCKVGLN 179
+ N+N R R+ + KV+ G +GR +D++ + Y+ L L MF
Sbjct: 962 RANQNQRMRT--YTKVQKRGS-VGRCIDVTRYKGYDELRYDLARMF-------------- 1004
Query: 180 GVNHGIIAGADRHSKLFDGSSNFVLTYEDKEGDWMLVGDVPWWMFISSVRRLRIMGTSEA 239
G+ G + R +++ L Y D E D +LVGD PW F+S V+ ++I+ ++E
Sbjct: 1005 GI-EGQLEDPQR--------TDWKLVYVDHENDILLVGDDPWEEFVSCVQSIKILSSAEV 1055
Query: 240 NGL 242
+
Sbjct: 1056 QQM 1058
>Medtr4g124900.1 | auxin response factor 2 | HC |
chr4:51795315-51802487 | 20130731
Length = 1120
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 34/123 (27%), Positives = 59/123 (47%), Gaps = 26/123 (21%)
Query: 120 KENRNPRTRSSLFVKVKMDGVPIGRKVDLSAHSSYETLAQSLEDMFNEPNTVLTCKVGLN 179
+ N+N R R+ + KV+ G +GR +D++ + Y+ L L MF
Sbjct: 985 RANQNQRMRT--YTKVQKRGS-VGRCIDVTRYKGYDELRYDLARMF-------------- 1027
Query: 180 GVNHGIIAGADRHSKLFDGSSNFVLTYEDKEGDWMLVGDVPWWMFISSVRRLRIMGTSEA 239
G+ G + R +++ L Y D E D +LVGD PW F+S V+ ++I+ ++E
Sbjct: 1028 GI-EGQLEDPQR--------TDWKLVYVDHENDILLVGDDPWEEFVSCVQSIKILSSAEV 1078
Query: 240 NGL 242
+
Sbjct: 1079 QQM 1081