Miyakogusa Predicted Gene
- Lj1g3v4518310.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj1g3v4518310.1 Non Characterized Hit- tr|Q2PEQ3|Q2PEQ3_TRIPR
Putative uncharacterized protein OS=Trifolium
pratense,75.58,0,NTF2,Nuclear transport factor 2; RRM_6,NULL; RNA
recognition motif,RNA recognition motif domain; NUC,CUFF.32577.1
(462 letters)
Database: Medicago_aa4.0v1
62,319 sequences; 21,947,249 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Medtr7g098440.1 | ras GTPase-activating binding-like protein | H... 533 e-151
Medtr1g045800.1 | Ras-GTPase-activating protein-binding protein ... 240 2e-63
Medtr7g013840.1 | ras GTPase-activating binding-like protein | H... 150 3e-36
Medtr7g055610.1 | nuclear transport factor 2 and RNA recognition... 147 2e-35
Medtr7g057520.1 | nuclear transport factor 2 and RNA recognition... 147 2e-35
Medtr7g013840.2 | ras GTPase-activating binding-like protein | H... 146 4e-35
Medtr4g109640.2 | ras GTPase-activating binding-like protein | H... 146 4e-35
Medtr4g109640.1 | ras GTPase-activating binding-like protein | H... 146 4e-35
Medtr4g083150.2 | ras-GTPase-activating protein-binding protein,... 136 4e-32
Medtr4g083150.1 | ras-GTPase-activating protein-binding protein,... 136 4e-32
Medtr4g109640.6 | ras GTPase-activating binding-like protein | H... 130 3e-30
Medtr4g109640.4 | ras GTPase-activating binding-like protein | H... 130 3e-30
Medtr4g109640.5 | ras GTPase-activating binding-like protein | H... 129 5e-30
Medtr4g109640.3 | ras GTPase-activating binding-like protein | H... 129 5e-30
Medtr1g069545.1 | nuclear transport factor 2 | LC | chr1:3017603... 105 1e-22
Medtr1g069520.1 | nuclear transport factor 2 | LC | chr1:3014527... 89 7e-18
Medtr3g051170.1 | hypothetical protein | LC | chr3:20183890-2018... 54 4e-07
>Medtr7g098440.1 | ras GTPase-activating binding-like protein | HC |
chr7:39405253-39409647 | 20130731
Length = 452
Score = 533 bits (1372), Expect = e-151, Method: Compositional matrix adjust.
Identities = 294/470 (62%), Positives = 327/470 (69%), Gaps = 29/470 (6%)
Query: 3 SSFTGSVSAAQVGSYFVGQYYQVLRQQPSLVHQFYSDSSSMIRVDGDITETAPDVLPIHS 62
+S+ GSVSAAQVGSYFVGQYYQVLRQQP VHQFYSD SSMIRVDGD TETA DVL IH+
Sbjct: 2 ASYQGSVSAAQVGSYFVGQYYQVLRQQPDHVHQFYSDLSSMIRVDGDYTETASDVLHIHN 61
Query: 63 IVTSLTFSTIEIKTINSLDSWNGGVLVVVSGFVKIKDVHRKRKFVQTFLLAPQEKGYFVL 122
IVTSL FSTIEI+TINSLDSW+GGV+V+V+G VK KD+HRK+KFVQTF LAPQEKGYFVL
Sbjct: 62 IVTSLNFSTIEIRTINSLDSWDGGVIVMVTGVVKNKDIHRKQKFVQTFFLAPQEKGYFVL 121
Query: 123 NDIFHFADDGVTHPNTVPVESEQYDTEPHYVPASLAEPPAAHYDLEEEAREYVDSVHIDD 182
NDIF F D+ V HPN VPV S++ D++PH V AS AEPPA+ Y EEEAR+YV+SVHIDD
Sbjct: 122 NDIFQFVDEDVVHPNLVPVASDRIDSQPH-VSASFAEPPASDYGFEEEARDYVNSVHIDD 180
Query: 183 DLVDKYSLPEEQQQLQ-EDXXXXXXXXXXPAQEAPPPIHSVAQTTHETPVAFVEESFEEP 241
D VDKYSLPE+QQQ ED P QEA PP+H+VA T ETP A VEESFEEP
Sbjct: 181 DPVDKYSLPEQQQQQLQEDFETEVVVDETPVQEASPPVHNVAHTIRETPAAPVEESFEEP 240
Query: 242 AKKTYASILRVSKGQSVLSAAPQQAPQYTFKSAPPPPEVNHXXXXXXXXX---------X 292
AKKTYASILR +KGQS LSAAPQ AP PP E NH
Sbjct: 241 AKKTYASILR-AKGQSALSAAPQHAP--------PPSEYNHVTQPAVQQSVAQPAFQQSS 291
Query: 293 XXXXYIPESXXXXXXXXXXXXXXXXXXXVTSVYVRNLPGDVTESEIEQEFKNFGRIKPDG 352
Y+ ES VTSVYVRNLP D+TE+EI+QEFKNFGRIKPDG
Sbjct: 292 SASAYVSESGPEAAEEGYRFEEEE----VTSVYVRNLPADITEAEIDQEFKNFGRIKPDG 347
Query: 353 IFIRVRQEIGVCYAFVEFEDIIGVQNALQASPLQLAGRQVYIEERRPNSGSAAXXXXXXX 412
IFIRVRQEIGVCYAFVEFED++G QNALQASP+QLAGR +YIEERRP++ SA
Sbjct: 348 IFIRVRQEIGVCYAFVEFEDVVGTQNALQASPIQLAGRPIYIEERRPSTSSATRGGRGRG 407
Query: 413 XXXXXYPTDAPXXXXXXXXXXXXXYQDRGDGYQQRDSCQQRDGYQQRGSR 462
YPTDAP YQD D + R DGY QRGSR
Sbjct: 408 RGRGSYPTDAPRGRFGGRSSGRGYYQDTSDYSRPRG-----DGYLQRGSR 452
>Medtr1g045800.1 | Ras-GTPase-activating protein-binding protein |
HC | chr1:17235956-17230849 | 20130731
Length = 416
Score = 240 bits (613), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 150/371 (40%), Positives = 214/371 (57%), Gaps = 32/371 (8%)
Query: 1 MASSFTGSVSAAQVGSYFVGQYYQVLRQQPSLVHQFYSDSSSMIRVDGDITETAPDVLPI 60
MA+ F ++AAQ+G+YFVGQYY VL+ QP LVHQFYSD+S+M+R+DG+ ETA +L I
Sbjct: 1 MATPFPIPLTAAQIGTYFVGQYYHVLQNQPELVHQFYSDASTMLRIDGNARETATAMLQI 60
Query: 61 HSIVTSLTFSTIEIKTINSLDSWNGGVLVVVSGFVKIKDVHRKRKFVQTFLLAPQEKGYF 120
H++V SL+++ IEIKT +SL+SW+GG +V+VSG V+IKD + +RKF+QTF LAPQEKG+F
Sbjct: 61 HTLVMSLSYTGIEIKTAHSLESWSGGAIVMVSGSVQIKD-NLRRKFMQTFFLAPQEKGFF 119
Query: 121 VLNDIFHFADDGVTHPN---TVPVESEQYDTEPHYVPASLAEPPAAHY---DLEEEAREY 174
VLNDIFHF +D + H + V + D++ + VP+++ P + + D++
Sbjct: 120 VLNDIFHFVEDDLIHHHHHQAVLLAQSNLDSKLN-VPSTINMPVSNYMPSGDIQARIVGR 178
Query: 175 VDSVHIDDDLVDKYSLPEEQQQLQEDXXXXXXXXXXPAQEAPPPIHSVAQTTHETPVAFV 234
+ V ++ + D Y E Q++Q A+++ +HS + A
Sbjct: 179 TNEVK-ENGVADNYGYSE--QRIQRGPDSEHIREDNAAEDSNGSLHSSGNAVQDHLPASP 235
Query: 235 EESFEEPAKKTYASILRVSKGQSVLSAAPQQAPQYTFKSAPP------PPEVNHXXXXXX 288
EE EP K TYASILRV+KGQS A+ Q + K+ P PP N
Sbjct: 236 EEPAGEPQKHTYASILRVAKGQSTPVAS-----QPSHKNVSPSEWDYIPPSSNQQSTASA 290
Query: 289 XXXXXXXXYIPESXXXXXXXXXXXXXXXXXXXVTSVYVRNLPGDVTESEIEQEFKNFGRI 348
P++ + SVYVRNL V+ SEIE+EFKNFGRI
Sbjct: 291 NAFERSE---PDA-------VEELPAAEYEDEIKSVYVRNLTPTVSPSEIEEEFKNFGRI 340
Query: 349 KPDGIFIRVRQ 359
+PDG+ IR R+
Sbjct: 341 RPDGVVIRSRR 351
>Medtr7g013840.1 | ras GTPase-activating binding-like protein | HC |
chr7:4087004-4079699 | 20130731
Length = 476
Score = 150 bits (378), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 122/403 (30%), Positives = 185/403 (45%), Gaps = 42/403 (10%)
Query: 10 SAAQVGSYFVGQYYQVLRQQPSLVHQFYSDSSSMIRVDGDITETAPDVLP-IHSIVTSLT 68
S VG+ FV QYY +L P LV++FY +SS + R D + T+ + I+ + SL
Sbjct: 13 SPEMVGNAFVEQYYHILHHSPELVYRFYQESSVISRPDSNGVMTSVTTMKGINEKILSLN 72
Query: 69 FSTI--EIKTINSLDSWNGGVLVVVSGFVKIKDVHRKRKFVQTFLLAPQEKGYFVLNDIF 126
F EIKT ++ S GV V+V+G + KD + +RKF Q+F LAPQ+ G+FVLND+F
Sbjct: 73 FKEFKAEIKTADAQKSHKEGVTVLVTGCLTGKD-NLRRKFAQSFFLAPQDNGFFVLNDVF 131
Query: 127 HFADD----------GVTHPNTVPVESEQYDTEP-HYVPASLAEPPAAHYDLEEEAREYV 175
+ +D G P V V SE EP H S +P +H +E +
Sbjct: 132 RYVEDPEPSEPHPVNGDDGPIAVTVTSE---PEPIHIADPSPTDPANSHV---KERQIVA 185
Query: 176 DSVHIDDDLVDKYSLPEEQQQLQEDXXXXXXXXXXPAQEAPPPIHSVAQTTHETPVAFVE 235
D+ + + + + E + ++ D A+ I S++Q
Sbjct: 186 DNAYEPSNHPETQIVAENEDTVEPDFQSNENVDSQAAE-----ITSLSQ----------- 229
Query: 236 ESFEEPAKKTYASILRVSKGQSVLSAAPQQAPQYTFKSAPPPPEVNHXXXXXXXXXXXXX 295
E+ KK+YASI++V KG L A P T K+ P
Sbjct: 230 ---EDAPKKSYASIVKVLKGN--LVPAKVYVPTKTVKNVPTNTVKKATNRTENKVVESVE 284
Query: 296 XYIPESXXXXXXXXXXXXXXXXXXXVTSVYVRNLPGDVTESEIEQEFKNFGRIKPDGIFI 355
S+Y+RNLP +VT +++E EF+ FG IKP I +
Sbjct: 285 PAAVPDAAPDNVGNPESNDSNEEVEGHSIYIRNLPLNVTVAQLETEFQKFGPIKPGCIQV 344
Query: 356 RVRQEIGVCYAFVEFEDIIGVQNALQASPLQLAGRQVYIEERR 398
R ++ G C+ FVE+ + + NA+QASP+ + GRQ +E +R
Sbjct: 345 RNNKQQGYCFGFVEYLSVNSMNNAIQASPIPIGGRQAVVEIKR 387
>Medtr7g055610.1 | nuclear transport factor 2 and RNA recognition
motif protein | HC | chr7:19043619-19039158 | 20130731
Length = 519
Score = 147 bits (371), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 127/416 (30%), Positives = 182/416 (43%), Gaps = 81/416 (19%)
Query: 14 VGSYFVGQYYQVLRQQPSLVHQFYSDSSSMIRVD-GDITETAPDVLPIHSIVTSLTFSTI 72
VG FV QYY +L + P VH+FY D S + R + I + I + S+ +S +
Sbjct: 22 VGHAFVEQYYYMLHESPEHVHRFYQDVSKLGRPEPNGIIGITTTMAEIDKKILSMGYSEL 81
Query: 73 --EIKTINSLDSWNGGVLVVVSGFVKIKDVHRKRKFVQTFLLAPQEKGYFVLNDIFHFAD 130
EI ++++ +S+ GGV+V+V+GF+ KD + K+KF Q F LAPQEKGYFVLNDIF + D
Sbjct: 82 SAEILSVDAQESFGGGVIVLVTGFMIGKD-NVKQKFTQCFFLAPQEKGYFVLNDIFRYVD 140
Query: 131 DGVTHPNTVPVESEQYDTEPHYVPASLAEPPAAHYDLEEEAREYVDSVHIDDDLVDKYSL 190
E EP + S A P ++ D LV + +
Sbjct: 141 -------------ENEIKEPDHAIRSPASPE-----------------NVLDPLVLETQV 170
Query: 191 PEEQQQLQEDXXXXXXXXXXPAQ-----------------EAPPPIHSVAQTTH----ET 229
PE+ E+ P E P A H
Sbjct: 171 PEQISVAAENGDRGELEVYNPENGQVSVEEEEAPVPEVLVEIPNDSQKAAGFDHVPDDSQ 230
Query: 230 PVAFVEESFEEPAKKTYASILRVSKG----QSVLSAAPQQAP---QYTFKSAPPPPEVNH 282
VA + EE KK+YASIL+V KG SV++AA + Q +A P P
Sbjct: 231 KVAELASQIEEVPKKSYASILKVMKGAAAPSSVMTAASVRTSIKIQEQQSAAAPSPSS-- 288
Query: 283 XXXXXXXXXXXXXXYIPESXXXXXXXXXXXXXXXXXXXVTSVYVRNLPGDVTESEIEQEF 342
+PE+ S+Y++ LPG+ T + +E F
Sbjct: 289 ---------------VPETNGSSISTNEGGNNQETEAEGYSIYLKGLPGNATHALVENMF 333
Query: 343 KNFGRIKPDGIFIRVRQEIGVCYAFVEFEDIIGVQNALQASPLQLAGRQVYIEERR 398
K FG IK G ++VR G + FVEFE+ +A++ASP+ + RQV IEE+R
Sbjct: 334 KKFGPIKSGG--VQVRTAKGFHFGFVEFEEESAALSAIEASPILINDRQVVIEEKR 387
>Medtr7g057520.1 | nuclear transport factor 2 and RNA recognition
motif protein | HC | chr7:20711228-20715478 | 20130731
Length = 512
Score = 147 bits (371), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 127/416 (30%), Positives = 182/416 (43%), Gaps = 81/416 (19%)
Query: 14 VGSYFVGQYYQVLRQQPSLVHQFYSDSSSMIRVD-GDITETAPDVLPIHSIVTSLTFSTI 72
VG FV QYY +L + P VH+FY D S + R + I + I + S+ +S +
Sbjct: 15 VGHAFVEQYYYMLHESPEHVHRFYQDVSKLGRPEPNGIIGITTTMAEIDKKILSMGYSEL 74
Query: 73 --EIKTINSLDSWNGGVLVVVSGFVKIKDVHRKRKFVQTFLLAPQEKGYFVLNDIFHFAD 130
EI ++++ +S+ GGV+V+V+GF+ KD + K+KF Q F LAPQEKGYFVLNDIF + D
Sbjct: 75 SAEILSVDAQESFGGGVIVLVTGFMIGKD-NVKQKFTQCFFLAPQEKGYFVLNDIFRYVD 133
Query: 131 DGVTHPNTVPVESEQYDTEPHYVPASLAEPPAAHYDLEEEAREYVDSVHIDDDLVDKYSL 190
E EP + S A P ++ D LV + +
Sbjct: 134 -------------ENEIKEPDHAIRSPASPE-----------------NVLDPLVLETQV 163
Query: 191 PEEQQQLQEDXXXXXXXXXXPAQ-----------------EAPPPIHSVAQTTH----ET 229
PE+ E+ P E P A H
Sbjct: 164 PEQISVAAENGDRGELEVYNPENGQVSVEEEEAPVPEVLVEIPNDSQKAAGFDHVPDDSQ 223
Query: 230 PVAFVEESFEEPAKKTYASILRVSKG----QSVLSAAPQQAP---QYTFKSAPPPPEVNH 282
VA + EE KK+YASIL+V KG SV++AA + Q +A P P
Sbjct: 224 KVAELASQIEEVPKKSYASILKVMKGAAAPSSVMTAASVRTSIKIQEQQSAAAPSPSS-- 281
Query: 283 XXXXXXXXXXXXXXYIPESXXXXXXXXXXXXXXXXXXXVTSVYVRNLPGDVTESEIEQEF 342
+PE+ S+Y++ LPG+ T + +E F
Sbjct: 282 ---------------VPETNGSSISTNEGGNNQETEAEGYSIYLKGLPGNATHALVENMF 326
Query: 343 KNFGRIKPDGIFIRVRQEIGVCYAFVEFEDIIGVQNALQASPLQLAGRQVYIEERR 398
K FG IK G ++VR G + FVEFE+ +A++ASP+ + RQV IEE+R
Sbjct: 327 KKFGPIKSGG--VQVRTAKGFHFGFVEFEEESAALSAIEASPILINDRQVVIEEKR 380
>Medtr7g013840.2 | ras GTPase-activating binding-like protein | HC |
chr7:4087004-4079699 | 20130731
Length = 475
Score = 146 bits (369), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 122/403 (30%), Positives = 185/403 (45%), Gaps = 43/403 (10%)
Query: 10 SAAQVGSYFVGQYYQVLRQQPSLVHQFYSDSSSMIRVDGDITETAPDVLP-IHSIVTSLT 68
S VG+ FV QYY +L P LV++FY +SS + R D + T+ + I+ + SL
Sbjct: 13 SPEMVGNAFVEQYYHILHHSPELVYRFYQESSVISRPDSNGVMTSVTTMKGINEKILSLN 72
Query: 69 FSTI--EIKTINSLDSWNGGVLVVVSGFVKIKDVHRKRKFVQTFLLAPQEKGYFVLNDIF 126
F EIKT ++ S GV V+V+G + KD + +RKF Q+F LAPQ+ G+FVLND+F
Sbjct: 73 FKEFKAEIKTADAQKSHKEGVTVLVTGCLTGKD-NLRRKFAQSFFLAPQDNGFFVLNDVF 131
Query: 127 HFADD----------GVTHPNTVPVESEQYDTEP-HYVPASLAEPPAAHYDLEEEAREYV 175
+ +D G P V V SE EP H S +P +H +E +
Sbjct: 132 RYVEDPEPSEPHPVNGDDGPIAVTVTSE---PEPIHIADPSPTDPANSHV---KERQIVA 185
Query: 176 DSVHIDDDLVDKYSLPEEQQQLQEDXXXXXXXXXXPAQEAPPPIHSVAQTTHETPVAFVE 235
D+ + + + + E + ++ D A+ I S++Q
Sbjct: 186 DNAYEPSNHPETQIVAENEDTVEPDFQSNENVDSQAAE-----ITSLSQ----------- 229
Query: 236 ESFEEPAKKTYASILRVSKGQSVLSAAPQQAPQYTFKSAPPPPEVNHXXXXXXXXXXXXX 295
E+ KK+YASI++V KG L A P T K+ P
Sbjct: 230 ---EDAPKKSYASIVKVLKGN--LVPAKVYVPTKTVKNVPTNTVKKATNRTENKVVESVE 284
Query: 296 XYIPESXXXXXXXXXXXXXXXXXXXVTSVYVRNLPGDVTESEIEQEFKNFGRIKPDGIFI 355
S+Y+RNLP +VT +++E EF+ FG IKP I +
Sbjct: 285 PAAVPDAAPDNVGNPESNDSNEEVEGHSIYIRNLPLNVTVAQLETEFQKFGPIKPGCIQV 344
Query: 356 RVRQEIGVCYAFVEFEDIIGVQNALQASPLQLAGRQVYIEERR 398
R ++ G C+ FVE+ + + NA+QASP+ + GRQ +E +R
Sbjct: 345 RNNKQ-GYCFGFVEYLSVNSMNNAIQASPIPIGGRQAVVEIKR 386
>Medtr4g109640.2 | ras GTPase-activating binding-like protein | HC |
chr4:45574880-45570261 | 20130731
Length = 461
Score = 146 bits (369), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 133/405 (32%), Positives = 197/405 (48%), Gaps = 64/405 (15%)
Query: 14 VGSYFVGQYYQVLRQQPSLVHQFYSDSSSMIRVDGD-ITETAPDVLPIHSIVTSLTF--S 70
VG+ FV QYY +L Q P LVH+FY DSS + R D + + +T I+ + SL +
Sbjct: 17 VGNAFVEQYYHILHQSPDLVHRFYQDSSLLSRSDSNGVMKTVTTTQAINETIVSLNYEDC 76
Query: 71 TIEIKTINSLDSWNGGVLVVVSGFVKIKDVHRKRKFVQTFLLAPQEKGYFVLNDIFHFAD 130
T EIKT ++ +S+ GV+V+V+G + KD + +RKF QTF LAPQ+KGY+VLND+F + +
Sbjct: 77 TAEIKTADAQESYEKGVIVLVTGCLTGKD-NVRRKFSQTFFLAPQDKGYYVLNDVFRYIE 135
Query: 131 DG------VTHPNTVPVESEQYDTEPHYVPASLAEPPAAHYDLEEEAREYVDSVHIDDDL 184
+ NTV E + E ++P S P+ H +E+ A VD + D
Sbjct: 136 ENDAPQLSSASINTVINE----NAEAVHIPESEDINPSEHL-VEDPATSAVDENPNNGDE 190
Query: 185 VDKYSLPEEQQQLQEDXXXXXXXXXXPAQEAPPPIHSVAQ-TTHETPVAFVEESFEEPAK 243
V Y + +++ L D APP S T + P + V+ ++ K
Sbjct: 191 V-YYPMDNKEEGLVIDEEVA----------APPNDPSENDIVTIQDPTSAVQ---DDARK 236
Query: 244 KTYASIL--------RV---SKGQSVLSAAPQQAPQYTFKSAPPPPEVNHXXXXXXXXXX 292
+YASI+ RV S+ V SA + T KS P P +
Sbjct: 237 TSYASIVMKSNTASGRVYVPSRAARVASAKSNEQRHATTKSTPGPEAL-----APSSDSA 291
Query: 293 XXXXYIPESXXXXXXXXXXXXXXXXXXXVTSVYVRNLPGDVTESEIEQEFKNFGRIKPDG 352
+PE S+Y+RNLP + T +E+ FK FG IK G
Sbjct: 292 PRTSDVPEEAEGH-----------------SIYIRNLPFNATIELLEEVFKKFGPIKHGG 334
Query: 353 IFIRVRQEIGVCYAFVEFEDIIGVQNALQASPLQLAGRQVYIEER 397
+ +R + G C+ FVE+E++ VQNAL+ASP+ + RQ IEE+
Sbjct: 335 VQVRSSKH-GFCFGFVEYEELSSVQNALKASPITVGERQAVIEEK 378
>Medtr4g109640.1 | ras GTPase-activating binding-like protein | HC |
chr4:45574880-45570261 | 20130731
Length = 461
Score = 146 bits (369), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 133/405 (32%), Positives = 197/405 (48%), Gaps = 64/405 (15%)
Query: 14 VGSYFVGQYYQVLRQQPSLVHQFYSDSSSMIRVDGD-ITETAPDVLPIHSIVTSLTF--S 70
VG+ FV QYY +L Q P LVH+FY DSS + R D + + +T I+ + SL +
Sbjct: 17 VGNAFVEQYYHILHQSPDLVHRFYQDSSLLSRSDSNGVMKTVTTTQAINETIVSLNYEDC 76
Query: 71 TIEIKTINSLDSWNGGVLVVVSGFVKIKDVHRKRKFVQTFLLAPQEKGYFVLNDIFHFAD 130
T EIKT ++ +S+ GV+V+V+G + KD + +RKF QTF LAPQ+KGY+VLND+F + +
Sbjct: 77 TAEIKTADAQESYEKGVIVLVTGCLTGKD-NVRRKFSQTFFLAPQDKGYYVLNDVFRYIE 135
Query: 131 DG------VTHPNTVPVESEQYDTEPHYVPASLAEPPAAHYDLEEEAREYVDSVHIDDDL 184
+ NTV E + E ++P S P+ H +E+ A VD + D
Sbjct: 136 ENDAPQLSSASINTVINE----NAEAVHIPESEDINPSEHL-VEDPATSAVDENPNNGDE 190
Query: 185 VDKYSLPEEQQQLQEDXXXXXXXXXXPAQEAPPPIHSVAQ-TTHETPVAFVEESFEEPAK 243
V Y + +++ L D APP S T + P + V+ ++ K
Sbjct: 191 V-YYPMDNKEEGLVIDEEVA----------APPNDPSENDIVTIQDPTSAVQ---DDARK 236
Query: 244 KTYASIL--------RV---SKGQSVLSAAPQQAPQYTFKSAPPPPEVNHXXXXXXXXXX 292
+YASI+ RV S+ V SA + T KS P P +
Sbjct: 237 TSYASIVMKSNTASGRVYVPSRAARVASAKSNEQRHATTKSTPGPEAL-----APSSDSA 291
Query: 293 XXXXYIPESXXXXXXXXXXXXXXXXXXXVTSVYVRNLPGDVTESEIEQEFKNFGRIKPDG 352
+PE S+Y+RNLP + T +E+ FK FG IK G
Sbjct: 292 PRTSDVPEEAEGH-----------------SIYIRNLPFNATIELLEEVFKKFGPIKHGG 334
Query: 353 IFIRVRQEIGVCYAFVEFEDIIGVQNALQASPLQLAGRQVYIEER 397
+ +R + G C+ FVE+E++ VQNAL+ASP+ + RQ IEE+
Sbjct: 335 VQVRSSKH-GFCFGFVEYEELSSVQNALKASPITVGERQAVIEEK 378
>Medtr4g083150.2 | ras-GTPase-activating protein-binding protein,
putative | HC | chr4:32360690-32356002 | 20130731
Length = 468
Score = 136 bits (343), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 127/420 (30%), Positives = 190/420 (45%), Gaps = 72/420 (17%)
Query: 14 VGSYFVGQYYQVLRQQPSLVHQFYSDSSSMIRVDGD-ITETAPDVLPIHSIVTSLTFST- 71
VG+ FV QYY +L + P VH+FY DSS M R + D T I + SL +++
Sbjct: 15 VGNAFVEQYYSILHRDPDQVHRFYHDSSVMSRPEEDGTMTTVTTTAEIDKKIQSLEYTSF 74
Query: 72 -IEIKTINSLDSWNGGVLVVVSGFVKIKDVHRKRKFVQTFLLAPQEKGYFVLNDIFHF-- 128
+E+ + ++ S+N GV+VVV+G + D + KRKF Q+F LAPQ+KG++VLND+F +
Sbjct: 75 RVEVLSADAQPSYNNGVMVVVTGCLTGTD-NIKRKFAQSFFLAPQDKGFYVLNDVFRYVD 133
Query: 129 --------------ADDGVTHPNTVPVESEQYDTEPHYVPASLAEPPAAHYDLEEEAREY 174
AD+ + E E P +P + P A +
Sbjct: 134 AYKSIDIESVPANDADESAPSEAIITPEPEPVHV-PEVIPPTQTVIPTAQTVIPPTQTVI 192
Query: 175 VDSVHIDDDLVDKYSLPEEQQQLQEDXXXXXXXXXXPAQEAPPPIHSVAQTTH-----ET 229
D+ I + + SLP E +L E P++ V +++H E
Sbjct: 193 ADTETI---ISKEVSLPLENGKLS-------------VTENVIPVNHVKESSHHVKEPEQ 236
Query: 230 PVAF---VEESFEEPAKKTYASILRVSKGQSV---LSAAPQQAPQYTFKSAPPPPEVNHX 283
P + + E+ KK++ASI+ K S L A+P K A PP V+
Sbjct: 237 PTSIEKVASNTQEDTPKKSFASIVNALKDNSAPFHLRASPA-------KPAVHPPRVHSV 289
Query: 284 XXXXXXXXXXXXXYIPESXXXXXXXXXXXXXXXXXXXVTSVYVRNLPGDVTESEIEQEFK 343
PE+ +++V NLP T ++++ FK
Sbjct: 290 PA-------------PEAPTPNMDIPLEKNNENAGR-AHAIFVANLPMSATVEQLDRAFK 335
Query: 344 NFGRIKPDGIFIRVRQEIGVCYAFVEFEDIIGVQNALQAS-PLQLAGRQVYIEERRPNSG 402
FG IK DGI +VR G C+ FVEFE +Q+AL+AS P+ L R++ IEERR SG
Sbjct: 336 KFGPIKRDGI--QVRSNKGSCFGFVEFESAASMQSALEASPPVMLDNRRLSIEERRGRSG 393
>Medtr4g083150.1 | ras-GTPase-activating protein-binding protein,
putative | HC | chr4:32360589-32355989 | 20130731
Length = 468
Score = 136 bits (343), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 127/420 (30%), Positives = 190/420 (45%), Gaps = 72/420 (17%)
Query: 14 VGSYFVGQYYQVLRQQPSLVHQFYSDSSSMIRVDGD-ITETAPDVLPIHSIVTSLTFST- 71
VG+ FV QYY +L + P VH+FY DSS M R + D T I + SL +++
Sbjct: 15 VGNAFVEQYYSILHRDPDQVHRFYHDSSVMSRPEEDGTMTTVTTTAEIDKKIQSLEYTSF 74
Query: 72 -IEIKTINSLDSWNGGVLVVVSGFVKIKDVHRKRKFVQTFLLAPQEKGYFVLNDIFHF-- 128
+E+ + ++ S+N GV+VVV+G + D + KRKF Q+F LAPQ+KG++VLND+F +
Sbjct: 75 RVEVLSADAQPSYNNGVMVVVTGCLTGTD-NIKRKFAQSFFLAPQDKGFYVLNDVFRYVD 133
Query: 129 --------------ADDGVTHPNTVPVESEQYDTEPHYVPASLAEPPAAHYDLEEEAREY 174
AD+ + E E P +P + P A +
Sbjct: 134 AYKSIDIESVPANDADESAPSEAIITPEPEPVHV-PEVIPPTQTVIPTAQTVIPPTQTVI 192
Query: 175 VDSVHIDDDLVDKYSLPEEQQQLQEDXXXXXXXXXXPAQEAPPPIHSVAQTTH-----ET 229
D+ I + + SLP E +L E P++ V +++H E
Sbjct: 193 ADTETI---ISKEVSLPLENGKLS-------------VTENVIPVNHVKESSHHVKEPEQ 236
Query: 230 PVAF---VEESFEEPAKKTYASILRVSKGQSV---LSAAPQQAPQYTFKSAPPPPEVNHX 283
P + + E+ KK++ASI+ K S L A+P K A PP V+
Sbjct: 237 PTSIEKVASNTQEDTPKKSFASIVNALKDNSAPFHLRASPA-------KPAVHPPRVHSV 289
Query: 284 XXXXXXXXXXXXXYIPESXXXXXXXXXXXXXXXXXXXVTSVYVRNLPGDVTESEIEQEFK 343
PE+ +++V NLP T ++++ FK
Sbjct: 290 PA-------------PEAPTPNMDIPLEKNNENAGR-AHAIFVANLPMSATVEQLDRAFK 335
Query: 344 NFGRIKPDGIFIRVRQEIGVCYAFVEFEDIIGVQNALQAS-PLQLAGRQVYIEERRPNSG 402
FG IK DGI +VR G C+ FVEFE +Q+AL+AS P+ L R++ IEERR SG
Sbjct: 336 KFGPIKRDGI--QVRSNKGSCFGFVEFESAASMQSALEASPPVMLDNRRLSIEERRGRSG 393
>Medtr4g109640.6 | ras GTPase-activating binding-like protein | HC |
chr4:45574880-45571868 | 20130731
Length = 370
Score = 130 bits (327), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 125/389 (32%), Positives = 186/389 (47%), Gaps = 64/389 (16%)
Query: 14 VGSYFVGQYYQVLRQQPSLVHQFYSDSSSMIRVDGD-ITETAPDVLPIHSIVTSLTF--S 70
VG+ FV QYY +L Q P LVH+FY DSS + R D + + +T I+ + SL +
Sbjct: 17 VGNAFVEQYYHILHQSPDLVHRFYQDSSLLSRSDSNGVMKTVTTTQAINETIVSLNYEDC 76
Query: 71 TIEIKTINSLDSWNGGVLVVVSGFVKIKDVHRKRKFVQTFLLAPQEKGYFVLNDIFHFAD 130
T EIKT ++ +S+ GV+V+V+G + KD + +RKF QTF LAPQ+KGY+VLND+F + +
Sbjct: 77 TAEIKTADAQESYEKGVIVLVTGCLTGKD-NVRRKFSQTFFLAPQDKGYYVLNDVFRYIE 135
Query: 131 DG------VTHPNTVPVESEQYDTEPHYVPASLAEPPAAHYDLEEEAREYVDSVHIDDDL 184
+ NTV E + E ++P S P+ H +E+ A VD + D
Sbjct: 136 ENDAPQLSSASINTVINE----NAEAVHIPESEDINPSEHL-VEDPATSAVDENPNNGDE 190
Query: 185 VDKYSLPEEQQQLQEDXXXXXXXXXXPAQEAPPPIHSVAQ-TTHETPVAFVEESFEEPAK 243
V Y + +++ L D APP S T + P + V+ ++ K
Sbjct: 191 V-YYPMDNKEEGLVIDEEVA----------APPNDPSENDIVTIQDPTSAVQ---DDARK 236
Query: 244 KTYASIL--------RV---SKGQSVLSAAPQQAPQYTFKSAPPPPEVNHXXXXXXXXXX 292
+YASI+ RV S+ V SA + T KS P P +
Sbjct: 237 TSYASIVMKSNTASGRVYVPSRAARVASAKSNEQRHATTKSTPGPEAL-----APSSDSA 291
Query: 293 XXXXYIPESXXXXXXXXXXXXXXXXXXXVTSVYVRNLPGDVTESEIEQEFKNFGRIKPDG 352
+PE S+Y+RNLP + T +E+ FK FG IK G
Sbjct: 292 PRTSDVPEEAEGH-----------------SIYIRNLPFNATIELLEEVFKKFGPIKHGG 334
Query: 353 IFIRVRQEIGVCYAFVEFEDIIGVQNALQ 381
+ +R + G C+ FVE+E++ VQNAL+
Sbjct: 335 VQVRSSKH-GFCFGFVEYEELSSVQNALK 362
>Medtr4g109640.4 | ras GTPase-activating binding-like protein | HC |
chr4:45574880-45571868 | 20130731
Length = 370
Score = 130 bits (327), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 125/389 (32%), Positives = 186/389 (47%), Gaps = 64/389 (16%)
Query: 14 VGSYFVGQYYQVLRQQPSLVHQFYSDSSSMIRVDGD-ITETAPDVLPIHSIVTSLTF--S 70
VG+ FV QYY +L Q P LVH+FY DSS + R D + + +T I+ + SL +
Sbjct: 17 VGNAFVEQYYHILHQSPDLVHRFYQDSSLLSRSDSNGVMKTVTTTQAINETIVSLNYEDC 76
Query: 71 TIEIKTINSLDSWNGGVLVVVSGFVKIKDVHRKRKFVQTFLLAPQEKGYFVLNDIFHFAD 130
T EIKT ++ +S+ GV+V+V+G + KD + +RKF QTF LAPQ+KGY+VLND+F + +
Sbjct: 77 TAEIKTADAQESYEKGVIVLVTGCLTGKD-NVRRKFSQTFFLAPQDKGYYVLNDVFRYIE 135
Query: 131 DG------VTHPNTVPVESEQYDTEPHYVPASLAEPPAAHYDLEEEAREYVDSVHIDDDL 184
+ NTV E + E ++P S P+ H +E+ A VD + D
Sbjct: 136 ENDAPQLSSASINTVINE----NAEAVHIPESEDINPSEHL-VEDPATSAVDENPNNGDE 190
Query: 185 VDKYSLPEEQQQLQEDXXXXXXXXXXPAQEAPPPIHSVAQ-TTHETPVAFVEESFEEPAK 243
V Y + +++ L D APP S T + P + V+ ++ K
Sbjct: 191 V-YYPMDNKEEGLVIDEEVA----------APPNDPSENDIVTIQDPTSAVQ---DDARK 236
Query: 244 KTYASIL--------RV---SKGQSVLSAAPQQAPQYTFKSAPPPPEVNHXXXXXXXXXX 292
+YASI+ RV S+ V SA + T KS P P +
Sbjct: 237 TSYASIVMKSNTASGRVYVPSRAARVASAKSNEQRHATTKSTPGPEAL-----APSSDSA 291
Query: 293 XXXXYIPESXXXXXXXXXXXXXXXXXXXVTSVYVRNLPGDVTESEIEQEFKNFGRIKPDG 352
+PE S+Y+RNLP + T +E+ FK FG IK G
Sbjct: 292 PRTSDVPEEAEGH-----------------SIYIRNLPFNATIELLEEVFKKFGPIKHGG 334
Query: 353 IFIRVRQEIGVCYAFVEFEDIIGVQNALQ 381
+ +R + G C+ FVE+E++ VQNAL+
Sbjct: 335 VQVRSSKH-GFCFGFVEYEELSSVQNALK 362
>Medtr4g109640.5 | ras GTPase-activating binding-like protein | HC |
chr4:45574880-45572715 | 20130731
Length = 370
Score = 129 bits (324), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 125/389 (32%), Positives = 186/389 (47%), Gaps = 64/389 (16%)
Query: 14 VGSYFVGQYYQVLRQQPSLVHQFYSDSSSMIRVDGD-ITETAPDVLPIHSIVTSLTF--S 70
VG+ FV QYY +L Q P LVH+FY DSS + R D + + +T I+ + SL +
Sbjct: 17 VGNAFVEQYYHILHQSPDLVHRFYQDSSLLSRSDSNGVMKTVTTTQAINETIVSLNYEDC 76
Query: 71 TIEIKTINSLDSWNGGVLVVVSGFVKIKDVHRKRKFVQTFLLAPQEKGYFVLNDIFHFAD 130
T EIKT ++ +S+ GV+V+V+G + KD + +RKF QTF LAPQ+KGY+VLND+F + +
Sbjct: 77 TAEIKTADAQESYEKGVIVLVTGCLTGKD-NVRRKFSQTFFLAPQDKGYYVLNDVFRYIE 135
Query: 131 DG------VTHPNTVPVESEQYDTEPHYVPASLAEPPAAHYDLEEEAREYVDSVHIDDDL 184
+ NTV E + E ++P S P+ H +E+ A VD + D
Sbjct: 136 ENDAPQLSSASINTVINE----NAEAVHIPESEDINPSEHL-VEDPATSAVDENPNNGDE 190
Query: 185 VDKYSLPEEQQQLQEDXXXXXXXXXXPAQEAPPPIHSVAQ-TTHETPVAFVEESFEEPAK 243
V Y + +++ L D APP S T + P + V+ ++ K
Sbjct: 191 V-YYPMDNKEEGLVIDEEVA----------APPNDPSENDIVTIQDPTSAVQ---DDARK 236
Query: 244 KTYASIL--------RV---SKGQSVLSAAPQQAPQYTFKSAPPPPEVNHXXXXXXXXXX 292
+YASI+ RV S+ V SA + T KS P P +
Sbjct: 237 TSYASIVMKSNTASGRVYVPSRAARVASAKSNEQRHATTKSTPGPEAL-----APSSDSA 291
Query: 293 XXXXYIPESXXXXXXXXXXXXXXXXXXXVTSVYVRNLPGDVTESEIEQEFKNFGRIKPDG 352
+PE S+Y+RNLP + T +E+ FK FG IK G
Sbjct: 292 PRTSDVPEEAEGH-----------------SIYIRNLPFNATIELLEEVFKKFGPIKHGG 334
Query: 353 IFIRVRQEIGVCYAFVEFEDIIGVQNALQ 381
+ +R + G C+ FVE+E++ VQNAL+
Sbjct: 335 VQVRSSKH-GFCFGFVEYEELSSVQNALK 362
>Medtr4g109640.3 | ras GTPase-activating binding-like protein | HC |
chr4:45574880-45572715 | 20130731
Length = 370
Score = 129 bits (324), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 125/389 (32%), Positives = 186/389 (47%), Gaps = 64/389 (16%)
Query: 14 VGSYFVGQYYQVLRQQPSLVHQFYSDSSSMIRVDGD-ITETAPDVLPIHSIVTSLTF--S 70
VG+ FV QYY +L Q P LVH+FY DSS + R D + + +T I+ + SL +
Sbjct: 17 VGNAFVEQYYHILHQSPDLVHRFYQDSSLLSRSDSNGVMKTVTTTQAINETIVSLNYEDC 76
Query: 71 TIEIKTINSLDSWNGGVLVVVSGFVKIKDVHRKRKFVQTFLLAPQEKGYFVLNDIFHFAD 130
T EIKT ++ +S+ GV+V+V+G + KD + +RKF QTF LAPQ+KGY+VLND+F + +
Sbjct: 77 TAEIKTADAQESYEKGVIVLVTGCLTGKD-NVRRKFSQTFFLAPQDKGYYVLNDVFRYIE 135
Query: 131 DG------VTHPNTVPVESEQYDTEPHYVPASLAEPPAAHYDLEEEAREYVDSVHIDDDL 184
+ NTV E + E ++P S P+ H +E+ A VD + D
Sbjct: 136 ENDAPQLSSASINTVINE----NAEAVHIPESEDINPSEHL-VEDPATSAVDENPNNGDE 190
Query: 185 VDKYSLPEEQQQLQEDXXXXXXXXXXPAQEAPPPIHSVAQ-TTHETPVAFVEESFEEPAK 243
V Y + +++ L D APP S T + P + V+ ++ K
Sbjct: 191 V-YYPMDNKEEGLVIDEEVA----------APPNDPSENDIVTIQDPTSAVQ---DDARK 236
Query: 244 KTYASIL--------RV---SKGQSVLSAAPQQAPQYTFKSAPPPPEVNHXXXXXXXXXX 292
+YASI+ RV S+ V SA + T KS P P +
Sbjct: 237 TSYASIVMKSNTASGRVYVPSRAARVASAKSNEQRHATTKSTPGPEAL-----APSSDSA 291
Query: 293 XXXXYIPESXXXXXXXXXXXXXXXXXXXVTSVYVRNLPGDVTESEIEQEFKNFGRIKPDG 352
+PE S+Y+RNLP + T +E+ FK FG IK G
Sbjct: 292 PRTSDVPEEAEGH-----------------SIYIRNLPFNATIELLEEVFKKFGPIKHGG 334
Query: 353 IFIRVRQEIGVCYAFVEFEDIIGVQNALQ 381
+ +R + G C+ FVE+E++ VQNAL+
Sbjct: 335 VQVRSSKH-GFCFGFVEYEELSSVQNALK 362
>Medtr1g069545.1 | nuclear transport factor 2 | LC |
chr1:30176039-30172449 | 20130731
Length = 598
Score = 105 bits (262), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 62/159 (38%), Positives = 89/159 (55%), Gaps = 16/159 (10%)
Query: 18 FVGQYYQVLRQQPSLVHQFYSDSSSMIRV-DGDITETAPDVLPIHSIVTSLTFSTIEIKT 76
F QYY +L + +H FY+++S+MI V + TA ++ IH+++ SL F I+ T
Sbjct: 441 FAPQYYGLLCSDANNMHYFYTENSTMILVINSHTVTTATELNQIHNLILSLKFDAIQTNT 500
Query: 77 INSLDSWNGGVLVVVSGFVKIKDVHRKRKFVQTFLLAPQ--EKGYFVLNDIFHFADDGVT 134
++ L+ W GVL VVSGFVKI+D+ RKFV T LAPQ GYF+ NDI H +T
Sbjct: 501 VHFLECWGLGVLFVVSGFVKIEDIAECRKFVHTIYLAPQGNGNGYFIKNDILHI----IT 556
Query: 135 HPNTVPVESE------QYDTEPHYVPASLAEPPAAHYDL 167
H + V ES+ D +P + PP+ +YD
Sbjct: 557 HDHLVAHESKPVAPITSKDIDPRFYS---EHPPSGNYDF 592
>Medtr1g069520.1 | nuclear transport factor 2 | LC |
chr1:30145276-30144265 | 20130731
Length = 260
Score = 89.4 bits (220), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 55/134 (41%), Positives = 80/134 (59%), Gaps = 9/134 (6%)
Query: 13 QVGSYFVGQYYQVL-RQQPSLVHQFYSDSSSMIRVDGDI-TETAPDVLPIHSIVTSLTFS 70
Q+G F QYY +L + +H FYS+ S+MI V ++ E+A + I +++ L+
Sbjct: 11 QLGESFASQYYGLLCSDDANKMHDFYSEHSTMILVIDEVPAESATGIGQIRELISRLSV- 69
Query: 71 TIEIKTINSLDSWNG--GVLVVVSGFVKIKDVHRKRKFVQTFLLAPQEKGYFVLNDIFHF 128
TIE I++L+ GVL+VVSGFVKIKD RKFV + LAP ++GYF+ +DI H
Sbjct: 70 TIETTAIHTLECEENPNGVLLVVSGFVKIKDTVECRKFVHSMYLAPYQEGYFIKSDILHI 129
Query: 129 ADDGVTHPNTVPVE 142
+TH + VP E
Sbjct: 130 ----ITHDHQVPHE 139
>Medtr3g051170.1 | hypothetical protein | LC |
chr3:20183890-20183633 | 20130731
Length = 60
Score = 53.9 bits (128), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 30/41 (73%), Positives = 30/41 (73%), Gaps = 2/41 (4%)
Query: 25 VLRQQPSLVHQFYSDS--SSMIRVDGDITETAPDVLPIHSI 63
VLRQQP VHQFYSDS SS IRVDGD TETA D L I I
Sbjct: 12 VLRQQPDHVHQFYSDSDSSSTIRVDGDYTETASDSLIITKI 52