Miyakogusa Predicted Gene

Lj1g3v4515780.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v4515780.1 Non Characterized Hit- tr|C6SZB1|C6SZB1_SOYBN
Putative uncharacterized protein OS=Glycine max PE=2
S,39.75,3e-17,RETINOIC ACID INDUCED 1/TRANSCRIPTION FACTOR 20,NULL;
zf-HC5HC2H,NULL,gene.g36666.t1.1
         (407 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr7g098170.1 | breast cancer susceptibility protein, putative...   471   e-133
Medtr2g018880.1 | breast cancer susceptibility-like protein, put...   163   2e-40
Medtr2g078630.1 | P-loop nucleoside triphosphate hydrolase super...    82   1e-15

>Medtr7g098170.1 | breast cancer susceptibility protein, putative |
           HC | chr7:39230788-39237133 | 20130731
          Length = 687

 Score =  471 bits (1213), Expect = e-133,   Method: Compositional matrix adjust.
 Identities = 256/472 (54%), Positives = 310/472 (65%), Gaps = 81/472 (17%)

Query: 1   MEDSGKP--NNKSKLMNPWMLHFQKLALELKCPLC------------------SCLVDSS 40
           ME+SGK   NN +KL+NPWMLHFQKLALELKCPLC                  SCL DS+
Sbjct: 1   MENSGKSIMNNNTKLLNPWMLHFQKLALELKCPLCLNLFKKPVLLPCNHLFCSSCLADST 60

Query: 41  LSGSECAVCKTKYAQ--------------------------------TDDSRVLQQCQTF 68
              SECA+C TK +Q                                +D++RVL+QCQT 
Sbjct: 61  SIRSECALCNTKCSQKDIRHLPFVESIVTIYKSLDATFCANAFQQRSSDNTRVLEQCQTL 120

Query: 69  RDSSYSNIKKADNFSQSSPNSNGFGVGENRKSMITMHVKPEELEMSSGGRAGFRNDVKPY 128
            +S++SN  K D   Q+S  SN  GVG+N +S I M+ K +E+EMS   + G  N +   
Sbjct: 121 HNSAFSN--KVDKVLQNSCMSNEVGVGKNHQSGIKMNGKAKEVEMSC--KRGADNHIAEK 176

Query: 129 PMQRSRVEIGDYVEMDVNQVTQAAVYSPPFCDTKGSDNDCSELDSDH------------- 175
           P             M++NQ TQ+   SPPFCDTKGSDN CS+L+S+              
Sbjct: 177 PDS-----------MNLNQATQSEPDSPPFCDTKGSDNGCSDLNSEKPLSLGRSESSSFK 225

Query: 176 -RASTGKGNLKERKSQFRSESSASETDKPTRDLKRKKYLTKGDDHIQHVSTHHSKLVDSH 234
             ++TGKGNLKER   F SESSASE +  TRDLKR+K LT  D  +Q  +++H+KLVDS 
Sbjct: 226 RSSTTGKGNLKERMPHFWSESSASENEDLTRDLKRQKNLTNEDGIVQQSTSYHNKLVDSR 285

Query: 235 CGLDLKSGKEPGELLPANIPIDLNPSTSICSFCQSSETSEATGPMLHYANGKSVIGDAAM 294
           C L++KS K+ G L+P+N P DL PSTSICSFCQSS+ SEATG MLHYA+G SV G+AAM
Sbjct: 286 CDLEIKSDKDTGALVPSNAPSDLYPSTSICSFCQSSKISEATGSMLHYASGISVTGEAAM 345

Query: 295 QPNVIHVHRCCVDWAPQVYFVDETCKNLKAEVARGAKLKCSTCGLKGAALGCYVKSCKRT 354
           +PNV+HVH+ C+DWAPQVYFV ET KNLKAEVARGAKLKC+ CG KGAALGCYVKSC+RT
Sbjct: 346 EPNVVHVHKVCIDWAPQVYFVGETVKNLKAEVARGAKLKCTKCGKKGAALGCYVKSCRRT 405

Query: 355 YHVPCAMDVSTCRWDQEKYLLLCPVHSNAKFPHEKSRPKKQATQEHPASAHL 406
           YHVPCAMD+S CRWD   YLLLCP HSN KFP+EKS   KQATQ+HP S+HL
Sbjct: 406 YHVPCAMDISACRWDHVDYLLLCPSHSNVKFPNEKSNLDKQATQKHPVSSHL 457


>Medtr2g018880.1 | breast cancer susceptibility-like protein,
           putative | HC | chr2:6018865-6024557 | 20130731
          Length = 1006

 Score =  163 bits (413), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 69/127 (54%), Positives = 90/127 (70%)

Query: 264 CSFCQSSETSEATGPMLHYANGKSVIGDAAMQPNVIHVHRCCVDWAPQVYFVDETCKNLK 323
           C+FC SSE SEA+GPM+HY + K V  D    P VIH HR C +WAP VYF D+   NL+
Sbjct: 620 CAFCLSSEESEASGPMVHYFDEKPVTADFEGGPKVIHCHRNCTEWAPNVYFEDDNAINLE 679

Query: 324 AEVARGAKLKCSTCGLKGAALGCYVKSCKRTYHVPCAMDVSTCRWDQEKYLLLCPVHSNA 383
           AE++R  ++KC  CGLKGAALGC+ KSC+R++HVPCA     CRWD E +++LCP+H+ +
Sbjct: 680 AEISRSRRIKCGFCGLKGAALGCFEKSCRRSFHVPCAKWTPECRWDMENFVMLCPLHAPS 739

Query: 384 KFPHEKS 390
             P E S
Sbjct: 740 LLPCESS 746


>Medtr2g078630.1 | P-loop nucleoside triphosphate hydrolase
           superfamily protein, putative | HC |
           chr2:32829577-32820356 | 20130731
          Length = 1828

 Score = 82.0 bits (201), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 37/83 (44%), Positives = 52/83 (62%), Gaps = 2/83 (2%)

Query: 299 IHVHRCCVDWAPQVYFVDETC-KNLKAEVARGAKLKCSTCGLKGAALGCYVKSCKRTYHV 357
           I VH+ C  W+P+VYF    C KN++A + RG  LKC+ CG +GA +GC V  C +TYH+
Sbjct: 425 IWVHQNCAVWSPEVYFAGLGCLKNVRAALCRGRALKCTRCGRRGATIGCRVDRCPKTYHL 484

Query: 358 PCAMDVSTCRWDQEKYLLLCPVH 380
            CA   + C +D  K+L+ C  H
Sbjct: 485 ACAR-ANGCIFDHRKFLIACTDH 506