Miyakogusa Predicted Gene

Lj1g3v4485290.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v4485290.1 tr|F1NAJ8|F1NAJ8_CHICK Tudor domain-containing
protein 3 OS=Gallus gallus GN=TDRD3 PE=4 SV=1,38.56,1e-18,GB DEF:
HYPOTHETICAL PROTEIN AT5G19950,NULL; FAMILY NOT NAMED,NULL;
DUF1767,Domain of unknown functi,CUFF.32494.1
         (376 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr2g050180.1 | tudor domain protein | HC | chr2:23059036-2305...   465   e-131

>Medtr2g050180.1 | tudor domain protein | HC |
           chr2:23059036-23051012 | 20130731
          Length = 437

 Score =  465 bits (1197), Expect = e-131,   Method: Compositional matrix adjust.
 Identities = 257/397 (64%), Positives = 299/397 (75%), Gaps = 23/397 (5%)

Query: 1   MEENSRSVSEAGTVVLETLRGRGWCLEDTDQLKAIIVIQSALADDRSKVVDFVESELLNS 60
           M+E+SR  SE+  +V+ETLR +GW LE+TD LKAIIVIQ+ALADD SKV + VESELLNS
Sbjct: 1   MQESSRD-SESAAMVIETLRRKGWYLEETDDLKAIIVIQTALADDPSKVFESVESELLNS 59

Query: 61  DLRSIGAKSLPHPSLLRNPSSHLLGPKVLQISSVRDISKXXXXXXXXXXX---XXXXXXT 117
           DL+SIGAKSLP PSLLR  +S+L GPKVLQISSVRDIS                     T
Sbjct: 60  DLKSIGAKSLPEPSLLRT-TSYLHGPKVLQISSVRDISMSSVDNISRNSSGRRLLRLCLT 118

Query: 118 DGHSEITAVEYSHIPVIPDDVVPGTKIRLENKVAVHSGIACLNPKVLTVLGGVVESLYEE 177
           DGHSEITAVEY+HIP +PD+VVPGTKIRLENKV VHSGIACLNPK LTVLGGVV+SLYEE
Sbjct: 119 DGHSEITAVEYTHIPFLPDNVVPGTKIRLENKVPVHSGIACLNPKALTVLGGVVQSLYEE 178

Query: 178 WQMNKKYSVFSRSSVRQLEDRDTGGPPSFVKLQVGSSSG---YNSRSDKPIAVVGETEMR 234
           WQMN+KYS FSRSS+R+LEDRD+GGPP FVKLQVGS++G   YNSRS KPIA     EMR
Sbjct: 179 WQMNQKYSGFSRSSIRKLEDRDSGGPPPFVKLQVGSTTGYADYNSRSGKPIAGASRAEMR 238

Query: 235 TTGIEQNTKQKAEVLDVNLKSKLPP---------------GRSDDKPSSSGTRPKEVVES 279
            T I+Q+  +K ++LD NLKSK PP                R++DKPSSSGTRPKEVVES
Sbjct: 239 PTDIQQDRNRKEDLLDANLKSKPPPERAEGKLSSSELRPKERAEDKPSSSGTRPKEVVES 298

Query: 280 VPVXXXXXXXXXXXXXXXPYQDGRNPKGWKHRGRGRQEDPVVFTLDEYEKRKSQAKPSIK 339
           VPV               PYQ GR+P+G   RG+G++ED VVFTL+EYEKRK+Q KPS  
Sbjct: 299 VPVQNQAAAQKLLQKLNQPYQRGRHPRGRGRRGKGQEEDEVVFTLEEYEKRKAQVKPSNN 358

Query: 340 DDVVDVSRDEDLAWQLQNQFNLEDSGVQRGSQETKAQ 376
           D+V+D+SRDEDLAWQLQNQFNLE S VQRG QE++A+
Sbjct: 359 DEVLDISRDEDLAWQLQNQFNLEHSQVQRGPQESEAE 395