Miyakogusa Predicted Gene

Lj1g3v4483850.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v4483850.1 Non Characterized Hit- tr|D8QNN5|D8QNN5_SELML
Putative uncharacterized protein OS=Selaginella
moelle,39.77,0.00000001,seg,NULL,CUFF.32479.1
         (156 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr7g096960.1 | pollen Ole e I family allergens | HC | chr7:38...   220   3e-58
Medtr3g117760.1 | pollen Ole e I family allergens | HC | chr3:55...    56   1e-08
Medtr3g089570.1 | pollen Ole e I family allergens | HC | chr3:16...    50   8e-07

>Medtr7g096960.1 | pollen Ole e I family allergens | HC |
           chr7:38929027-38928456 | 20130731
          Length = 151

 Score =  220 bits (561), Expect = 3e-58,   Method: Compositional matrix adjust.
 Identities = 100/124 (80%), Positives = 112/124 (90%)

Query: 33  NIPGFIYTRSRGRCTPQFWSGRREAWPRMVPETSTVTNVFGSRVYERYRSDLTLLEATER 92
           ++PGF+YTR+RG CTPQFWSGR+E WPRMVPETSTV+NVFG RVY+RYRSDLTLLEAT R
Sbjct: 28  HLPGFLYTRNRGTCTPQFWSGRKETWPRMVPETSTVSNVFGWRVYKRYRSDLTLLEATTR 87

Query: 93  NDEEGNPFRALLKEGTAALLNSYAREGFPYKPWQVKTLLIQALVSEASATSQAKHFSLAN 152
           NDE  NPF ALLKEGT AL+NSYAR+GFPYKPWQVKTL++Q  VSE +A SQAKHFSLAN
Sbjct: 88  NDEVDNPFGALLKEGTTALINSYARQGFPYKPWQVKTLVMQGFVSEVAAASQAKHFSLAN 147

Query: 153 HACS 156
           HACS
Sbjct: 148 HACS 151


>Medtr3g117760.1 | pollen Ole e I family allergens | HC |
           chr3:55143434-55145943 | 20130731
          Length = 298

 Score = 56.2 bits (134), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 43/122 (35%), Positives = 57/122 (46%), Gaps = 6/122 (4%)

Query: 33  NIPGFIYTRSRGRCTPQFWSG-RREAWPRMVPETSTVTNVFGSRVYERYRSDLTLLEATE 91
           N+P  I+  +   C  Q W+    E + R V   + V   FG     RY +D+TL    +
Sbjct: 167 NLPPMIFPEASA-CPSQKWTMPEYECYWRGVNRDTKVGVAFGMVAARRYGTDMTLWYGLK 225

Query: 92  RNDEEGNPFRALLKEGTAALLNSYAREGFPYKPWQVKTLLIQALV-SEASATSQAKHFSL 150
                G+P+R LL+EG  ALLNSY    F Y P  V T +  AL+ S       A HF  
Sbjct: 226 ---GRGDPYRTLLREGITALLNSYNSIQFSYHPLGVITHMNYALMGSTRDVLVTAYHFMR 282

Query: 151 AN 152
           AN
Sbjct: 283 AN 284


>Medtr3g089570.1 | pollen Ole e I family allergens | HC |
           chr3:16299572-16301945 | 20130731
          Length = 272

 Score = 50.1 bits (118), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 31/85 (36%), Positives = 40/85 (47%), Gaps = 2/85 (2%)

Query: 70  NVFGSRVYERYRSDLTLLEATERNDEEGNPFRALLKEGTAALLNSYAREGFPYKPWQVKT 129
           N FG      +   LTL +A      +G    AL +EGTA+ LNS     FPY   QVK 
Sbjct: 184 NAFGVTNIPGFSPGLTLPQALSNTRTDG--LGALYREGTASFLNSLVNNKFPYTTDQVKD 241

Query: 130 LLIQALVSEASATSQAKHFSLANHA 154
               +L S  +A +QA  F +AN  
Sbjct: 242 RFASSLHSNKAAATQAHLFKMANEG 266