Miyakogusa Predicted Gene

Lj1g3v4483600.2
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v4483600.2 Non Characterized Hit- tr|K4CUQ3|K4CUQ3_SOLLC
Uncharacterized protein OS=Solanum lycopersicum GN=Sol,38.65,2e-16,
,CUFF.32476.2
         (405 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr1g070180.1 | bHLH transcription factor-like protein | HC | ...   280   2e-75
Medtr7g096650.3 | bHLH transcription factor-like protein | HC | ...   214   2e-55
Medtr7g096650.2 | bHLH transcription factor-like protein | HC | ...   213   2e-55
Medtr7g096650.1 | bHLH transcription factor-like protein | HC | ...   213   2e-55

>Medtr1g070180.1 | bHLH transcription factor-like protein | HC |
           chr1:30860903-30866937 | 20130731
          Length = 666

 Score =  280 bits (715), Expect = 2e-75,   Method: Compositional matrix adjust.
 Identities = 181/421 (42%), Positives = 236/421 (56%), Gaps = 97/421 (23%)

Query: 1   MGTVTHIRNQFLSTQDYSVGHVPSQMHTSLKSSSSQPEVLKENLSSDIMHVCLHDTEKTT 60
           MG VTHIR+ FLST+D+++G++PSQ+  S+K                      H+T+KT 
Sbjct: 142 MGFVTHIRSLFLSTRDHTLGYLPSQIQ-SVK----------------------HNTQKTM 178

Query: 61  NSEKVDVLTPLQSSERNYAPHSAYEKLT-DMATLEGPEFRSDE-TFLLPTISNMINVEHQ 118
             E +D++TP Q   +NY+P + Y+K+T D+A  EG E  +D  + LL ++SNM+  E+ 
Sbjct: 179 TGETLDMVTPFQCPGKNYSPPTVYQKMTIDVAKHEGLEIDNDRGSILLQSLSNMMTAENT 238

Query: 119 EFEEMRHLNERRCRGDSSGCKNMSLE-SENATSVLNNSVINNTSFNALIHSSEKVSADSA 177
           +   M+  NER C G ++GCK+ SL+  +N +S L NSV+N  S   L   SE V A   
Sbjct: 239 KQVGMKPSNERMCEGSNNGCKDTSLKPDKNVSSFLRNSVMNYNSTKDLTSPSENVEA--- 295

Query: 178 CFPSVFLDTVVCESDKLLRVDAGHNEMLSFTALSDVNSQKHTKKSECQTEPCDKDTSYFQ 237
                  DTV+                                             S FQ
Sbjct: 296 -------DTVM---------------------------------------------SKFQ 303

Query: 238 PEPCCKDTSYMMSKFPAGCELHEALGPAFLKGSKCFDWLAQVNQDMKTVDMPDEISTSQL 297
            E   +DTSY + KFPAG ELHEALGP FLK S+ FDW  Q NQD K  +M DEIS SQL
Sbjct: 304 TESFYEDTSYTL-KFPAGYELHEALGPGFLKESRYFDWAVQGNQDSKASEMSDEISCSQL 362

Query: 298 TSESRPEHLLEAMVANISHSNND-NNGELSFCTSMQSAMTSGKNPEASLHNVHSVNSKAY 356
           T ESRPEHLLEA+V  + HSNN+  + E SF TS Q  + SG+ PEAS+ NV ++NS+ Y
Sbjct: 363 TFESRPEHLLEAVVTRVCHSNNNIVDNEASFSTSGQDTIVSGRKPEASIQNVRTINSEGY 422

Query: 357 SIDHPSLLREDKHH-SLS-------------SSTCPGSYSEQFERSSEPSKNSKNKARPR 402
           SID  S+++ED+HH SLS             SSTCP S S QFERSSEPSKNSK +ARP 
Sbjct: 423 SIDQSSIIKEDRHHRSLSLSGICGVISPKSFSSTCPSSCSNQFERSSEPSKNSKKRARPG 482

Query: 403 E 403
           E
Sbjct: 483 E 483


>Medtr7g096650.3 | bHLH transcription factor-like protein | HC |
           chr7:38772710-38769985 | 20130731
          Length = 469

 Score =  214 bits (544), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 115/168 (68%), Positives = 130/168 (77%), Gaps = 14/168 (8%)

Query: 243 KDTSYMMSKFPAGCELHEALGPAFLKGSKCFDWLAQVNQDMKTVDMPDEISTSQLTSESR 302
           K++SY   KFPAGCEL EALGP+ LKGSK FDWLAQVNQDMK VD+PD  +TSQLTSES 
Sbjct: 127 KNSSYTPLKFPAGCELLEALGPSSLKGSKYFDWLAQVNQDMKIVDVPDVFNTSQLTSESH 186

Query: 303 PEHLLEAMVANISH-SNNDNNGELSFCTSMQSAMTSGKNPEASLHNVHSVNSKAYSIDHP 361
           PEHLLEAMVANI H SNND N ELSFC SMQSA++SGK  +AS+ +VH       +IDH 
Sbjct: 187 PEHLLEAMVANICHSSNNDVNSELSFCRSMQSALSSGKTIDASIQDVH-------TIDHT 239

Query: 362 SLLREDKHHSL------SSSTCPGSYSEQFERSSEPSKNSKNKARPRE 403
           SL+REDK+H L       SSTCP + SEQFERSSEPSKNSK +ARP E
Sbjct: 240 SLVREDKNHCLSSSSKVVSSTCPSACSEQFERSSEPSKNSKKRARPGE 287



 Score =  118 bits (296), Expect = 8e-27,   Method: Compositional matrix adjust.
 Identities = 72/136 (52%), Positives = 86/136 (63%), Gaps = 10/136 (7%)

Query: 42  ENLSSDIMHVCLHDTEKTTNSEKVDVLTPLQSSERNYAPHSAYEKLTD-MATLEGPEFRS 100
           E  SSD M  C+ +       + VDVLTPLQ S RN   HSAY ++ D M   EG E  S
Sbjct: 2   EKSSSDFMPACMRN-------KTVDVLTPLQCSGRNNTTHSAYWEMGDNMVKHEGAELYS 54

Query: 101 DET-FLLPTISNMINVEHQEFEEMRHLNERRCRGDSSGCKNMSLESE-NATSVLNNSVIN 158
           D +  LL ++S+MINVEHQEF E+R +N R C G SSGCKNM L+SE N +S LNNS IN
Sbjct: 55  DVSPILLQSMSDMINVEHQEFGEIRPINSRECEGGSSGCKNMILDSEQNRSSFLNNSAIN 114

Query: 159 NTSFNALIHSSEKVSA 174
           N     LIH SEK S+
Sbjct: 115 NAGVYDLIHQSEKNSS 130


>Medtr7g096650.2 | bHLH transcription factor-like protein | HC |
           chr7:38776810-38769985 | 20130731
          Length = 645

 Score =  213 bits (543), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 115/168 (68%), Positives = 130/168 (77%), Gaps = 14/168 (8%)

Query: 243 KDTSYMMSKFPAGCELHEALGPAFLKGSKCFDWLAQVNQDMKTVDMPDEISTSQLTSESR 302
           K++SY   KFPAGCEL EALGP+ LKGSK FDWLAQVNQDMK VD+PD  +TSQLTSES 
Sbjct: 303 KNSSYTPLKFPAGCELLEALGPSSLKGSKYFDWLAQVNQDMKIVDVPDVFNTSQLTSESH 362

Query: 303 PEHLLEAMVANISH-SNNDNNGELSFCTSMQSAMTSGKNPEASLHNVHSVNSKAYSIDHP 361
           PEHLLEAMVANI H SNND N ELSFC SMQSA++SGK  +AS+ +VH       +IDH 
Sbjct: 363 PEHLLEAMVANICHSSNNDVNSELSFCRSMQSALSSGKTIDASIQDVH-------TIDHT 415

Query: 362 SLLREDKHHSL------SSSTCPGSYSEQFERSSEPSKNSKNKARPRE 403
           SL+REDK+H L       SSTCP + SEQFERSSEPSKNSK +ARP E
Sbjct: 416 SLVREDKNHCLSSSSKVVSSTCPSACSEQFERSSEPSKNSKKRARPGE 463



 Score =  159 bits (401), Expect = 6e-39,   Method: Compositional matrix adjust.
 Identities = 102/184 (55%), Positives = 123/184 (66%), Gaps = 11/184 (5%)

Query: 2   GTVTHIRNQFLSTQDYSVGHVPSQMHTSLKSSSSQPEVLKENLSSDIMHVCLHDTEKTTN 61
           G V HIRN FLSTQDYS+ H+PSQ+ +S KSSSSQP+VL E  SSD M  C+ +      
Sbjct: 138 GVVNHIRNLFLSTQDYSIDHIPSQIQSSSKSSSSQPDVLMEKSSSDFMPACMRN------ 191

Query: 62  SEKVDVLTPLQSSERNYAPHSAYEKLTD-MATLEGPEFRSDET-FLLPTISNMINVEHQE 119
            + VDVLTPLQ S RN   HSAY ++ D M   EG E  SD +  LL ++S+MINVEHQE
Sbjct: 192 -KTVDVLTPLQCSGRNNTTHSAYWEMGDNMVKHEGAELYSDVSPILLQSMSDMINVEHQE 250

Query: 120 FEEMRHLNERRCRGDSSGCKNMSLESE-NATSVLNNSVINNTSFNALIHSSEKVSADSAC 178
           F E+R +N R C G SSGCKNM L+SE N +S LNNS INN     LIH SEK S+ +  
Sbjct: 251 FGEIRPINSRECEGGSSGCKNMILDSEQNRSSFLNNSAINNAGVYDLIHQSEKNSSYTPL 310

Query: 179 -FPS 181
            FP+
Sbjct: 311 KFPA 314


>Medtr7g096650.1 | bHLH transcription factor-like protein | HC |
           chr7:38776810-38769985 | 20130731
          Length = 665

 Score =  213 bits (543), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 115/168 (68%), Positives = 130/168 (77%), Gaps = 14/168 (8%)

Query: 243 KDTSYMMSKFPAGCELHEALGPAFLKGSKCFDWLAQVNQDMKTVDMPDEISTSQLTSESR 302
           K++SY   KFPAGCEL EALGP+ LKGSK FDWLAQVNQDMK VD+PD  +TSQLTSES 
Sbjct: 323 KNSSYTPLKFPAGCELLEALGPSSLKGSKYFDWLAQVNQDMKIVDVPDVFNTSQLTSESH 382

Query: 303 PEHLLEAMVANISH-SNNDNNGELSFCTSMQSAMTSGKNPEASLHNVHSVNSKAYSIDHP 361
           PEHLLEAMVANI H SNND N ELSFC SMQSA++SGK  +AS+ +VH       +IDH 
Sbjct: 383 PEHLLEAMVANICHSSNNDVNSELSFCRSMQSALSSGKTIDASIQDVH-------TIDHT 435

Query: 362 SLLREDKHHSL------SSSTCPGSYSEQFERSSEPSKNSKNKARPRE 403
           SL+REDK+H L       SSTCP + SEQFERSSEPSKNSK +ARP E
Sbjct: 436 SLVREDKNHCLSSSSKVVSSTCPSACSEQFERSSEPSKNSKKRARPGE 483



 Score =  159 bits (401), Expect = 6e-39,   Method: Compositional matrix adjust.
 Identities = 102/184 (55%), Positives = 123/184 (66%), Gaps = 11/184 (5%)

Query: 2   GTVTHIRNQFLSTQDYSVGHVPSQMHTSLKSSSSQPEVLKENLSSDIMHVCLHDTEKTTN 61
           G V HIRN FLSTQDYS+ H+PSQ+ +S KSSSSQP+VL E  SSD M  C+ +      
Sbjct: 158 GVVNHIRNLFLSTQDYSIDHIPSQIQSSSKSSSSQPDVLMEKSSSDFMPACMRN------ 211

Query: 62  SEKVDVLTPLQSSERNYAPHSAYEKLTD-MATLEGPEFRSDET-FLLPTISNMINVEHQE 119
            + VDVLTPLQ S RN   HSAY ++ D M   EG E  SD +  LL ++S+MINVEHQE
Sbjct: 212 -KTVDVLTPLQCSGRNNTTHSAYWEMGDNMVKHEGAELYSDVSPILLQSMSDMINVEHQE 270

Query: 120 FEEMRHLNERRCRGDSSGCKNMSLESE-NATSVLNNSVINNTSFNALIHSSEKVSADSAC 178
           F E+R +N R C G SSGCKNM L+SE N +S LNNS INN     LIH SEK S+ +  
Sbjct: 271 FGEIRPINSRECEGGSSGCKNMILDSEQNRSSFLNNSAINNAGVYDLIHQSEKNSSYTPL 330

Query: 179 -FPS 181
            FP+
Sbjct: 331 KFPA 334