Miyakogusa Predicted Gene

Lj1g3v4483360.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v4483360.1 Non Characterized Hit- tr|B9S4W1|B9S4W1_RICCO
Nucleic acid binding protein, putative OS=Ricinus comm,41.94,2e-19,no
description,Zinc finger C2H2-type/integrase DNA-binding domain;
seg,NULL; ZINC_FINGER_C2H2_2,Zinc,CUFF.32451.1
         (149 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr1g070250.1 | transcriptional regulator superman protein | H...   119   1e-27
Medtr4g064873.1 | transcriptional regulator superman protein | H...    68   3e-12
Medtr1g075430.1 | transcriptional regulator superman protein | H...    68   4e-12
Medtr1g044225.1 | transcriptional regulator superman protein | H...    65   3e-11
Medtr7g063220.1 | C2H2 and C2HC zinc finger protein | HC | chr7:...    62   2e-10
Medtr3g068095.1 | transcriptional regulator superman protein | H...    59   1e-09
Medtr5g014400.1 | palmate-like pentafoliata 1 transcription fact...    57   5e-09
Medtr5g080660.1 | transcriptional regulator superman protein | L...    55   3e-08
Medtr1g070265.1 | C2H2-type zinc finger protein | LC | chr1:3097...    54   4e-08
Medtr4g021270.1 | transcriptional regulator superman protein | H...    54   5e-08
Medtr2g076060.1 | C2H2 type zinc finger transcription factor fam...    53   1e-07
Medtr7g026977.1 | zinc finger-like protein | LC | chr7:9012595-9...    51   3e-07
Medtr5g008280.1 | zinc finger-like protein | LC | chr5:1724313-1...    49   2e-06
Medtr5g008390.1 | C2H2 and C2HC zinc finger protein | HC | chr5:...    49   2e-06
Medtr3g011990.1 | zinc finger-like protein | LC | chr3:3157305-3...    48   4e-06
Medtr8g466760.1 | zinc finger-like protein | LC | chr8:23851851-...    47   4e-06

>Medtr1g070250.1 | transcriptional regulator superman protein | HC |
           chr1:30957093-30955961 | 20130731
          Length = 191

 Score =  119 bits (297), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 76/159 (47%), Positives = 93/159 (58%), Gaps = 37/159 (23%)

Query: 26  GAGRSYECIFCKRGFTTAQALGGHMNIHRKDKVNKSK--------PSFPNK--VDDSNYA 75
           G GRSYEC+FCKRGFTTAQALGGHMNIHRKD+ N +K        P   +K  VD  NY 
Sbjct: 35  GIGRSYECVFCKRGFTTAQALGGHMNIHRKDRANNNKSATKTNFAPPSSSKLVVDHDNYG 94

Query: 76  ELGFYSEVSNHPQGGNNYYAN-------------NYHQVYFPA----TRASNIENQ---- 114
           +LGFYS ++        YY++             NYHQ+YFP+    +    +ENQ    
Sbjct: 95  DLGFYSTINPSHLARGGYYSSISSTTTTPEVDSLNYHQIYFPSHVQYSEMLCVENQRMFG 154

Query: 115 QDWRQRNLSLYGNPFS---VRDNAEDG-LDLELRLGRHP 149
           QDW  R LSLY NP +   + +N E G LDLELRLG +P
Sbjct: 155 QDW--RGLSLYTNPLNKDKIENNNEVGELDLELRLGHYP 191


>Medtr4g064873.1 | transcriptional regulator superman protein | HC |
           chr4:24223803-24223252 | 20130731
          Length = 173

 Score = 68.2 bits (165), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 53/142 (37%), Positives = 66/142 (46%), Gaps = 23/142 (16%)

Query: 29  RSYECIFCKRGFTTAQALGGHMNIHRKDKVNKSKPS-------FPNKVDDSNYAELGFYS 81
           RSYEC FCKRGF+ AQALGGHMNIHRKDK    + S        P+ ++ S+  +L    
Sbjct: 21  RSYECNFCKRGFSNAQALGGHMNIHRKDKAKLKQQSSTNYQTQLPSNLEGSSSEDLNKLL 80

Query: 82  E------VSNH-PQGGNNYYANNYHQVYFP-----ATRASNIENQQDWRQRNLSLYGNPF 129
                  VS   P  G+        Q   P      TR     N Q   QR +       
Sbjct: 81  PNLNTNIVSQQAPSRGDEILVTQVRQ-QLPLFAESPTRNETQINPQGQVQREIITTQEAL 139

Query: 130 --SVRDNAEDGLDLELRLGRHP 149
             S +D++ + LDLELRLG  P
Sbjct: 140 LLSAQDSSSE-LDLELRLGPEP 160


>Medtr1g075430.1 | transcriptional regulator superman protein | HC
          | chr1:33406305-33406881 | 20130731
          Length = 191

 Score = 67.8 bits (164), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 29/37 (78%), Positives = 30/37 (81%)

Query: 26 GAGRSYECIFCKRGFTTAQALGGHMNIHRKDKVNKSK 62
          G  RSYEC FCKRGFT AQALGGHMNIHRKD+   SK
Sbjct: 15 GKRRSYECTFCKRGFTNAQALGGHMNIHRKDRAKASK 51


>Medtr1g044225.1 | transcriptional regulator superman protein | HC |
           chr1:16708226-16707542 | 20130731
          Length = 165

 Score = 64.7 bits (156), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 52/145 (35%), Positives = 70/145 (48%), Gaps = 25/145 (17%)

Query: 22  DDTAGAGRSYECIFCKRGFTTAQALGGHMNIHRKDKVN-KSKPSFPNK---VDDSNYAEL 77
           D+     RSY+C FCKRGFT A+ALGGHMNIHRK++   K+K   PN    V     ++ 
Sbjct: 19  DECIVTKRSYDCTFCKRGFTNARALGGHMNIHRKERTTYKAKQGTPNSSPFVPAVVSSQP 78

Query: 78  GFYSEVSNHPQGGNNYYANNYHQVYFPATRASNIENQQDW-RQRNLSLYGNPFSVRDNAE 136
             Y  +   P+   NY  + YHQ      R S    Q D+    + SL G   S++  + 
Sbjct: 79  STYYCILEPPR---NY--DMYHQTSKTNPRNSPPTFQYDFLNTSSQSLLGTNLSLQIGSS 133

Query: 137 ---------------DGLDLELRLG 146
                          +G+DLELRLG
Sbjct: 134 HKGNDQVWRGIEKDGEGVDLELRLG 158


>Medtr7g063220.1 | C2H2 and C2HC zinc finger protein | HC |
          chr7:23011049-23010633 | 20130731
          Length = 138

 Score = 61.6 bits (148), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 26/42 (61%), Positives = 30/42 (71%)

Query: 23 DTAGAGRSYECIFCKRGFTTAQALGGHMNIHRKDKVNKSKPS 64
          D  G  RSY C FCKRGF+ AQALGGHMNIHR+D+    + S
Sbjct: 18 DDPGQVRSYSCTFCKRGFSNAQALGGHMNIHRRDRAKLKQQS 59


>Medtr3g068095.1 | transcriptional regulator superman protein | HC |
           chr3:30727183-30725842 | 20130731
          Length = 260

 Score = 59.3 bits (142), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 38/114 (33%), Positives = 60/114 (52%), Gaps = 17/114 (14%)

Query: 29  RSYECIFCKRGFTTAQALGGHMNIHRKDKVNKSKPSFPNKVDDSNYAELGFYSEVSNHPQ 88
           RSY C FCKR F +AQALGGHMN+HR+D+          K+  S    L  ++E+  H  
Sbjct: 55  RSYSCHFCKREFRSAQALGGHMNVHRRDRA---------KLKQS----LNHHNELELHSH 101

Query: 89  GGNNYYANNYHQVYFPATRASNIENQQDWRQRNLSLYGNPFSVRDNAEDGLDLE 142
             N++  +  +   +P+T  +    Q++  Q N+S Y +     +N ++ LD E
Sbjct: 102 HKNHFTTSRDNSSTWPSTTYT----QENCFQPNMSSYSSSIKWGNNHKESLDSE 151


>Medtr5g014400.1 | palmate-like pentafoliata 1 transcription factor
           | HC | chr5:4830733-4831488 | 20130731
          Length = 251

 Score = 57.4 bits (137), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 26/53 (49%), Positives = 33/53 (62%), Gaps = 9/53 (16%)

Query: 23  DTAGAGRSYECIFCKRGFTTAQALGGHMNIHRKDK---------VNKSKPSFP 66
           +T    RSY C FC+R F +AQALGGHMN+HR+D+         +N S PS P
Sbjct: 74  NTTWPPRSYTCTFCRREFRSAQALGGHMNVHRRDRARLHQTQPPLNSSHPSSP 126


>Medtr5g080660.1 | transcriptional regulator superman protein | LC |
           chr5:34522376-34523245 | 20130731
          Length = 234

 Score = 54.7 bits (130), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 32/76 (42%), Positives = 43/76 (56%), Gaps = 10/76 (13%)

Query: 29  RSYECIFCKRGFTTAQALGGHMNIHRKDKVNKSKPSFPNKVDDSNYAELG---FYSEVSN 85
           R Y C FCKR F +AQALGGHMNIHR+D+    +   P K +D   + LG   F +++S+
Sbjct: 47  RFYSCNFCKREFRSAQALGGHMNIHRRDRARLKQNLSPQKNNDLINSSLGNHYFSAKMSS 106

Query: 86  HPQGGNNYYANNYHQV 101
                      NYHQ+
Sbjct: 107 KIDC-------NYHQL 115


>Medtr1g070265.1 | C2H2-type zinc finger protein | LC |
          chr1:30978693-30978130 | 20130731
          Length = 187

 Score = 54.3 bits (129), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 21/35 (60%), Positives = 27/35 (77%)

Query: 24 TAGAGRSYECIFCKRGFTTAQALGGHMNIHRKDKV 58
          T+   R+Y C FCKR F +AQALGGHMN+HR+D+ 
Sbjct: 30 TSWPARNYSCSFCKREFRSAQALGGHMNVHRRDRA 64


>Medtr4g021270.1 | transcriptional regulator superman protein | HC
          | chr4:6890129-6888889 | 20130731
          Length = 336

 Score = 54.3 bits (129), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 21/30 (70%), Positives = 25/30 (83%)

Query: 29 RSYECIFCKRGFTTAQALGGHMNIHRKDKV 58
          RSY C FC+R F +AQALGGHMN+HRKD+ 
Sbjct: 59 RSYSCSFCRREFRSAQALGGHMNVHRKDRA 88


>Medtr2g076060.1 | C2H2 type zinc finger transcription factor
          family protein | HC | chr2:31844759-31844082 | 20130731
          Length = 225

 Score = 53.1 bits (126), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 21/38 (55%), Positives = 28/38 (73%)

Query: 29 RSYECIFCKRGFTTAQALGGHMNIHRKDKVNKSKPSFP 66
          RSY C FC++ F +AQALGGHMN+HR+D+    + S P
Sbjct: 50 RSYTCSFCRKEFKSAQALGGHMNVHRRDRARLRQSSPP 87


>Medtr7g026977.1 | zinc finger-like protein | LC |
           chr7:9012595-9011525 | 20130731
          Length = 356

 Score = 51.2 bits (121), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 20/38 (52%), Positives = 27/38 (71%)

Query: 21  NDDTAGAGRSYECIFCKRGFTTAQALGGHMNIHRKDKV 58
           N++  G  RS+ C +CK  F+TAQALGGH N HRK++ 
Sbjct: 140 NNEGKGDSRSFSCTYCKAKFSTAQALGGHQNAHRKERA 177


>Medtr5g008280.1 | zinc finger-like protein | LC |
          chr5:1724313-1725476 | 20130731
          Length = 387

 Score = 48.9 bits (115), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 20/40 (50%), Positives = 28/40 (70%)

Query: 21 NDDTAGAGRSYECIFCKRGFTTAQALGGHMNIHRKDKVNK 60
          ND+     RS+ C+FCKR F+T+QALGGH N H+ ++  K
Sbjct: 38 NDEKNLNLRSFSCLFCKRKFSTSQALGGHQNAHKAERALK 77


>Medtr5g008390.1 | C2H2 and C2HC zinc finger protein | HC |
          chr5:1759920-1760372 | 20130731
          Length = 92

 Score = 48.5 bits (114), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 24/54 (44%), Positives = 34/54 (62%), Gaps = 3/54 (5%)

Query: 28 GRSYECIFCKRGFTTAQALGGHMNIHRKDKV--NKSKPSFPNK-VDDSNYAELG 78
           RS+ C+FCKR FTT+QALGGH N ++ ++    + K S+P+     S Y  LG
Sbjct: 13 SRSFSCLFCKRKFTTSQALGGHQNAYKAERALEKQRKQSYPDTFFTPSYYRALG 66


>Medtr3g011990.1 | zinc finger-like protein | LC |
           chr3:3157305-3156415 | 20130731
          Length = 296

 Score = 47.8 bits (112), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 18/38 (47%), Positives = 26/38 (68%)

Query: 21  NDDTAGAGRSYECIFCKRGFTTAQALGGHMNIHRKDKV 58
           N++     RS+ C FCKR F+T+QALGGH N H+ ++ 
Sbjct: 90  NEEKNSDSRSFSCSFCKRQFSTSQALGGHQNAHKAERA 127


>Medtr8g466760.1 | zinc finger-like protein | LC |
           chr8:23851851-23852744 | 20130731
          Length = 297

 Score = 47.4 bits (111), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 18/38 (47%), Positives = 26/38 (68%)

Query: 21  NDDTAGAGRSYECIFCKRGFTTAQALGGHMNIHRKDKV 58
           N++     RS+ C FCKR F+T+QALGGH N H+ ++ 
Sbjct: 90  NEEKNSDSRSFSCSFCKRQFSTSQALGGHQNAHKAERT 127