Miyakogusa Predicted Gene
- Lj1g3v4480290.2
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj1g3v4480290.2 tr|Q25BJ5|Q25BJ5_BRAOL Basic helix-loop-helix
(BHLH) family transcription factor OS=Brassica
olerace,31.3,1e-18,seg,NULL; bHLH-MYC_N,Transcription factor MYC/MYB
N-terminal; EGL3 (ENHANCER OF GLABRA3), DNA BINDIN,CUFF.32504.2
(235 letters)
Database: Medicago_aa4.0v1
62,319 sequences; 21,947,249 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Medtr7g096350.2 | ABA-inducible bHLH-type transcription factor |... 365 e-101
Medtr7g096350.1 | ABA-inducible bHLH-type transcription factor |... 365 e-101
Medtr7g117670.1 | ABA-inducible bHLH-type transcription factor |... 88 5e-18
Medtr8g027495.1 | ABA-inducible bHLH-type transcription factor |... 66 3e-11
Medtr5g030430.1 | basic helix loop helix (bHLH) family transcrip... 52 3e-07
Medtr8g067280.1 | basic helix loop helix (bHLH) family transcrip... 52 7e-07
>Medtr7g096350.2 | ABA-inducible bHLH-type transcription factor | HC
| chr7:38659023-38661790 | 20130731
Length = 503
Score = 365 bits (936), Expect = e-101, Method: Compositional matrix adjust.
Identities = 179/236 (75%), Positives = 195/236 (82%), Gaps = 1/236 (0%)
Query: 1 MHMFYLTSAYYVFGFNSQCGPGSSFKCSKSIWASEAASCLNQYESRSFLAKLAGFQTVVF 60
++M YLTS YYVFGFNSQ GPG+SFKC+K W+S+A SCLNQYESRSFLAK AGFQ+V F
Sbjct: 137 LYMLYLTSVYYVFGFNSQYGPGNSFKCAKPSWSSDAGSCLNQYESRSFLAKSAGFQSVAF 196
Query: 61 VPFKGGGVELGSKEMMPEEQGVLDMVRATFGESSSAQGKVLPKIFGHELSLGDTKSQSIT 120
VP K G +ELGS EM+PEEQG LDMV+ATFGES S Q KV PKIFGHELSLGDTKSQSIT
Sbjct: 197 VPLKAGVIELGSTEMVPEEQGFLDMVKATFGESISGQAKVAPKIFGHELSLGDTKSQSIT 256
Query: 121 ISFSPKVEDDSGFTSDSYEVQALGVNHAYGNSSNGCIGD-GEAKMFPQLNQMIPGNFNPQ 179
ISFSPKVEDDSGFTSDSYEVQALG NHAYGNSSNG +GD EAK +PQL QMIPGNF Q
Sbjct: 257 ISFSPKVEDDSGFTSDSYEVQALGANHAYGNSSNGGVGDSNEAKKYPQLGQMIPGNFTSQ 316
Query: 180 ARVSSLDLGNEDASSPHLDDXXXXXXXXXXXXXXEEPLNHVEAERQRREKLNQRFY 235
ARVSS+DLGNED+SSP ++ EEPLNHVEAERQRREKLNQRFY
Sbjct: 317 ARVSSIDLGNEDSSSPLGEERKPRKRGRKPANGREEPLNHVEAERQRREKLNQRFY 372
>Medtr7g096350.1 | ABA-inducible bHLH-type transcription factor | HC
| chr7:38659003-38661345 | 20130731
Length = 503
Score = 365 bits (936), Expect = e-101, Method: Compositional matrix adjust.
Identities = 179/236 (75%), Positives = 195/236 (82%), Gaps = 1/236 (0%)
Query: 1 MHMFYLTSAYYVFGFNSQCGPGSSFKCSKSIWASEAASCLNQYESRSFLAKLAGFQTVVF 60
++M YLTS YYVFGFNSQ GPG+SFKC+K W+S+A SCLNQYESRSFLAK AGFQ+V F
Sbjct: 137 LYMLYLTSVYYVFGFNSQYGPGNSFKCAKPSWSSDAGSCLNQYESRSFLAKSAGFQSVAF 196
Query: 61 VPFKGGGVELGSKEMMPEEQGVLDMVRATFGESSSAQGKVLPKIFGHELSLGDTKSQSIT 120
VP K G +ELGS EM+PEEQG LDMV+ATFGES S Q KV PKIFGHELSLGDTKSQSIT
Sbjct: 197 VPLKAGVIELGSTEMVPEEQGFLDMVKATFGESISGQAKVAPKIFGHELSLGDTKSQSIT 256
Query: 121 ISFSPKVEDDSGFTSDSYEVQALGVNHAYGNSSNGCIGD-GEAKMFPQLNQMIPGNFNPQ 179
ISFSPKVEDDSGFTSDSYEVQALG NHAYGNSSNG +GD EAK +PQL QMIPGNF Q
Sbjct: 257 ISFSPKVEDDSGFTSDSYEVQALGANHAYGNSSNGGVGDSNEAKKYPQLGQMIPGNFTSQ 316
Query: 180 ARVSSLDLGNEDASSPHLDDXXXXXXXXXXXXXXEEPLNHVEAERQRREKLNQRFY 235
ARVSS+DLGNED+SSP ++ EEPLNHVEAERQRREKLNQRFY
Sbjct: 317 ARVSSIDLGNEDSSSPLGEERKPRKRGRKPANGREEPLNHVEAERQRREKLNQRFY 372
>Medtr7g117670.1 | ABA-inducible bHLH-type transcription factor | HC
| chr7:48837262-48834876 | 20130731
Length = 574
Score = 88.2 bits (217), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 86/273 (31%), Positives = 124/273 (45%), Gaps = 54/273 (19%)
Query: 2 HMFYLTSAYYVF--GFNSQCGPGSSFKCSKSIWASEAASCLNQYESRSFLAKLAGFQTVV 59
MF+L S Y+ F G+ GPG F K +W ++ Y RSFLAK AG QTVV
Sbjct: 162 EMFFLASMYFFFPKGYG---GPGKCFASGKHLWFKS----VSDYCFRSFLAKSAGIQTVV 214
Query: 60 FVPFKGGGVELGSKEMMPEEQGVLDMVRATFGESSSAQGKV--------LPKI------- 104
VP G VELGS ++PE +L+ +++ F S KV +PK+
Sbjct: 215 LVPTDFGVVELGSVRLLPEIFDLLNKIKSLFSISKPLYPKVVNEESSVSIPKLVLNLNNG 274
Query: 105 ---FGHELSLGDTKSQSITISFS---PKVEDDSGFTSDSYEVQALGVNHAYGN--SSNGC 156
F +L++ S ++ + S P + G S+ GVN G +SNG
Sbjct: 275 RTHFREKLAIRKMDSNNVNNNNSINFPSARN--GICGSSW-----GVNQGQGEIFASNGV 327
Query: 157 -----IGDGEAKMFPQLNQMIPGNFN-PQARVSSLD--------LGNEDASSPHLDDXXX 202
+ + + PQ + +F+ +R +S+ + + +A P D+
Sbjct: 328 RKDFRLNNNNSNYQPQRQMPMQIDFSGANSRANSVRPVIAESELVADVEADQPS-DERRP 386
Query: 203 XXXXXXXXXXXEEPLNHVEAERQRREKLNQRFY 235
+EPLNHVEAERQRREKLNQRFY
Sbjct: 387 RKRGRKPANGRDEPLNHVEAERQRREKLNQRFY 419
>Medtr8g027495.1 | ABA-inducible bHLH-type transcription factor | HC
| chr8:9802803-9805726 | 20130731
Length = 623
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 41/107 (38%), Positives = 57/107 (53%), Gaps = 3/107 (2%)
Query: 2 HMFYLTSAYYVFGFNSQCGPGSSFKCSKSIWASEA-ASCLNQYESRSFLAKLAGFQTVVF 60
MF+L S Y+ F N GPG F K +W +A S + Y R+FLAK GF+T+V
Sbjct: 153 EMFFLASMYFSFP-NGHGGPGKCFASGKHLWLCDALKSSSSDYCVRAFLAKSVGFKTIVL 211
Query: 61 VPFKGGGVELGSKEMMPEEQGVLDMVRATFGESSS-AQGKVLPKIFG 106
VP G VELGS + E +L +++ F SS A+ K + + G
Sbjct: 212 VPTDLGVVELGSVRTVGESVELLQTIKSVFSTQSSFARAKSISSLDG 258
>Medtr5g030430.1 | basic helix loop helix (bHLH) family
transcription factor | HC | chr5:12884262-12887061 |
20130731
Length = 677
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 22/22 (100%), Positives = 22/22 (100%)
Query: 214 EEPLNHVEAERQRREKLNQRFY 235
EEPLNHVEAERQRREKLNQRFY
Sbjct: 489 EEPLNHVEAERQRREKLNQRFY 510
>Medtr8g067280.1 | basic helix loop helix (bHLH) family
transcription factor | HC | chr8:28079487-28082002 |
20130731
Length = 648
Score = 51.6 bits (122), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 21/22 (95%), Positives = 22/22 (100%)
Query: 214 EEPLNHVEAERQRREKLNQRFY 235
EEPLNHVEAERQRREKLNQ+FY
Sbjct: 458 EEPLNHVEAERQRREKLNQKFY 479