Miyakogusa Predicted Gene

Lj1g3v4452620.1
Show Alignment:  
BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v4452620.1 Non Characterized Hit- tr|I1GNH0|I1GNH0_BRADI
Uncharacterized protein OS=Brachypodium distachyon
GN=,32.78,6e-16,seg,NULL,gene.g36540.t1.1
         (269 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr7g096210.1 | E3 ubiquitin protein ligase DRIP2, putative | ...   283   2e-76
Medtr7g096210.2 | E3 ubiquitin protein ligase DRIP2, putative | ...   283   2e-76
Medtr7g115240.1 | E3 ubiquitin protein ligase DRIP2, putative | ...   161   7e-40

>Medtr7g096210.1 | E3 ubiquitin protein ligase DRIP2, putative | HC
           | chr7:38583482-38588867 | 20130731
          Length = 429

 Score =  283 bits (723), Expect = 2e-76,   Method: Compositional matrix adjust.
 Identities = 179/263 (68%), Positives = 197/263 (74%), Gaps = 9/263 (3%)

Query: 12  RPDHNLQDMRAKIFPLKGRKAKAPE---VAPSVPLPARRKERSLSSLVVITPRVSAQATM 68
           RPDH  QD+RAKIFPLKGRK KAPE   VA S PLPA+RKERSLSSLVV TPRVS Q TM
Sbjct: 72  RPDHTKQDVRAKIFPLKGRKVKAPEPEAVAASEPLPAKRKERSLSSLVVNTPRVSVQTTM 131

Query: 69  TGRRTKPTRKASGLRSSSFSIEKPIKKE-EVSGDHPESSSSRDTSNKLPQNTEQSSSPCG 127
           TGRRTKPTRKAS LRSSSFSI+K IKKE E+  D PESSSS + SNKL QN  Q S    
Sbjct: 132 TGRRTKPTRKASSLRSSSFSIDKSIKKEAELLDDCPESSSSPEASNKLRQNNGQQSE--- 188

Query: 128 GSQSKPNKESENSAEPWDAKLDLWKPLNFLVEVASRSKSFKS-NAQGSDAKLEPIPVNES 186
           GSQS PN+ +EN ++  DAK+DLWKPLN LVEVASR+KS KS N QGSDAK EP   NES
Sbjct: 189 GSQSAPNRVTENDSKTCDAKMDLWKPLNCLVEVASRTKSLKSNNIQGSDAKPEPAQANES 248

Query: 187 DSQVQXXXXXXXXXXXXXXXXRISPHLVSSDTSKPNKLRRIRKKKEPALGESGISPQAVL 246
            SQVQ                 ISP  VSSDT+KPNKLRR+R+KKEP  GESGISPQAV+
Sbjct: 249 GSQVQKIKNKEKKRKAKVEDESISPFPVSSDTAKPNKLRRVRRKKEP-FGESGISPQAVV 307

Query: 247 HSSSNKLLRDGPIWFSLVASENQ 269
            S+ +KL + GPIWFSLVASENQ
Sbjct: 308 DSTGSKLFKGGPIWFSLVASENQ 330


>Medtr7g096210.2 | E3 ubiquitin protein ligase DRIP2, putative | HC
           | chr7:38583482-38588861 | 20130731
          Length = 428

 Score =  283 bits (723), Expect = 2e-76,   Method: Compositional matrix adjust.
 Identities = 179/263 (68%), Positives = 197/263 (74%), Gaps = 10/263 (3%)

Query: 12  RPDHNLQDMRAKIFPLKGRKAKAPE---VAPSVPLPARRKERSLSSLVVITPRVSAQATM 68
           RPDH  QD+RAKIFPLKGRK KAPE   VA S PLPA+RKERSLSSLVV TPRVS Q TM
Sbjct: 72  RPDHTKQDVRAKIFPLKGRKVKAPEPEAVAASEPLPAKRKERSLSSLVVNTPRVSVQTTM 131

Query: 69  TGRRTKPTRKASGLRSSSFSIEKPIKKE-EVSGDHPESSSSRDTSNKLPQNTEQSSSPCG 127
           TGRRTKPTRKAS LRSSSFSI+K IKKE E+  D PESSSS + SNKL QN  QS     
Sbjct: 132 TGRRTKPTRKASSLRSSSFSIDKSIKKEAELLDDCPESSSSPEASNKLRQNNGQSE---- 187

Query: 128 GSQSKPNKESENSAEPWDAKLDLWKPLNFLVEVASRSKSFKS-NAQGSDAKLEPIPVNES 186
           GSQS PN+ +EN ++  DAK+DLWKPLN LVEVASR+KS KS N QGSDAK EP   NES
Sbjct: 188 GSQSAPNRVTENDSKTCDAKMDLWKPLNCLVEVASRTKSLKSNNIQGSDAKPEPAQANES 247

Query: 187 DSQVQXXXXXXXXXXXXXXXXRISPHLVSSDTSKPNKLRRIRKKKEPALGESGISPQAVL 246
            SQVQ                 ISP  VSSDT+KPNKLRR+R+KKEP  GESGISPQAV+
Sbjct: 248 GSQVQKIKNKEKKRKAKVEDESISPFPVSSDTAKPNKLRRVRRKKEP-FGESGISPQAVV 306

Query: 247 HSSSNKLLRDGPIWFSLVASENQ 269
            S+ +KL + GPIWFSLVASENQ
Sbjct: 307 DSTGSKLFKGGPIWFSLVASENQ 329


>Medtr7g115240.1 | E3 ubiquitin protein ligase DRIP2, putative | HC
           | chr7:47590926-47596695 | 20130731
          Length = 428

 Score =  161 bits (407), Expect = 7e-40,   Method: Compositional matrix adjust.
 Identities = 112/278 (40%), Positives = 153/278 (55%), Gaps = 36/278 (12%)

Query: 12  RPDHNLQDMRAKIFPLKGRKAKAPEVAPSVPLPARRKERSLSSLVVITPRVSAQATMTGR 71
           RPDHNLQD+R KIFP K +K KA EV PS PLP +RKERSLSSLVV  P+VS   T TG+
Sbjct: 69  RPDHNLQDIRTKIFPCKRQKVKAEEVVPSTPLPPKRKERSLSSLVVSAPKVSTHTTFTGK 128

Query: 72  RTK-PTRKASGLRSSSFSIEKPIKKEEVSGDHPESSSSRDTSNKLPQNTEQSSSPCGGSQ 130
           RTK  TRKA+ LR  SF  E+ IKKEE   +    SS  +TS K                
Sbjct: 129 RTKTATRKAAALRGCSFIPEETIKKEETHNEDNPDSSIAETSKK---------------- 172

Query: 131 SKPNKESENSAEPWDAKLDLWKPLNFLVEVASRSKSFKSNAQGSD-AKLEP-------IP 182
           ++PN++++N+ +  + K DLW PLN LVE A+R+KS +SN QG+   KLE        + 
Sbjct: 173 NRPNEDTDNNIDLTEGKADLWTPLNCLVEAANRTKSSRSNLQGTPLTKLESPTTPHGGLE 232

Query: 183 VNESDSQVQXXXXXXXXXXXXXXXXRISPHLVSSDTSK--------PNKLRRIR--KKKE 232
           ++E  ++ +                + + H       K        P K +R+R  K+K 
Sbjct: 233 MSEITTKSEPPTSVQGELHMPKTKNKSNGHKTKFGDDKGGNTMPSGPVKRKRMRPSKQKR 292

Query: 233 PALGESGISPQAVLHSSSNKLLR-DGPIWFSLVASENQ 269
            A  E   S Q +L ++ ++  R + PIWF+LVASE+Q
Sbjct: 293 AAAFEMSASAQLMLDATESRCNRKNNPIWFTLVASEDQ 330