Miyakogusa Predicted Gene
- Lj1g3v4450490.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj1g3v4450490.1 Non Characterized Hit- tr|I3SQD1|I3SQD1_LOTJA
Uncharacterized protein OS=Lotus japonicus PE=2
SV=1,99.49,0,IAA_ARF,Aux/IAA-ARF-dimerisation; AUX_IAA,AUX/IAA
protein; CAD & PB1 domains,NULL; FAMILY NOT NAMED,,CUFF.32401.1
(196 letters)
Database: Medicago_aa4.0v1
62,319 sequences; 21,947,249 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Medtr1g070830.1 | auxin-responsive AUX/IAA family protein | HC |... 266 9e-72
Medtr1g040675.1 | auxin response factor | HC | chr1:15063378-150... 225 2e-59
Medtr1g076270.1 | auxin response factor | HC | chr1:33944737-339... 218 3e-57
Medtr1g093350.1 | auxin response factor | HC | chr1:33849453-338... 218 3e-57
Medtr1g040675.2 | auxin response factor | HC | chr1:15063472-150... 188 2e-48
Medtr1g093240.1 | auxin-responsive AUX/IAA family protein | HC |... 166 1e-41
Medtr1g093240.2 | auxin-responsive AUX/IAA family protein | HC |... 165 2e-41
Medtr2g101500.1 | auxin-responsive AUX/IAA family protein | HC |... 160 5e-40
Medtr6g488150.1 | auxin response factor | HC | chr6:33216291-332... 160 9e-40
Medtr1g080860.1 | auxin-responsive AUX/IAA family protein | HC |... 158 3e-39
Medtr1g080860.2 | auxin-responsive AUX/IAA family protein | HC |... 158 4e-39
Medtr5g067350.1 | auxin response factor | HC | chr5:28450190-284... 156 1e-38
Medtr1g070520.1 | auxin-responsive AUX/IAA family protein | HC |... 156 1e-38
Medtr8g067530.1 | auxin-responsive AUX/IAA family protein | HC |... 154 4e-38
Medtr5g030710.2 | auxin-responsive AUX/IAA family protein | HC |... 149 1e-36
Medtr5g030710.1 | auxin-responsive AUX/IAA family protein | HC |... 149 1e-36
Medtr7g096090.1 | auxin-responsive AUX/IAA family protein | HC |... 145 3e-35
Medtr8g103030.1 | auxin-responsive AUX/IAA family protein | HC |... 143 1e-34
Medtr4g011880.1 | auxin-responsive AUX/IAA family protein | HC |... 137 8e-33
Medtr1g093240.3 | auxin-responsive AUX/IAA family protein | HC |... 134 6e-32
Medtr1g069495.1 | auxin response factor | HC | chr1:30104004-300... 110 7e-25
Medtr8g014520.1 | auxin response factor | HC | chr8:4572622-4568... 102 3e-22
Medtr8g014520.2 | auxin response factor | HC | chr8:4572622-4568... 102 3e-22
Medtr2g100780.1 | auxin-responsive AUX/IAA family protein | HC |... 99 2e-21
Medtr2g100780.4 | auxin-responsive AUX/IAA family protein | HC |... 99 2e-21
Medtr2g100780.2 | auxin-responsive AUX/IAA family protein | HC |... 99 2e-21
Medtr2g100780.3 | auxin-responsive AUX/IAA family protein | HC |... 99 3e-21
Medtr2g102490.1 | auxin-responsive AUX/IAA family protein | HC |... 97 7e-21
Medtr6g488150.2 | auxin response factor | HC | chr6:33216341-332... 97 1e-20
Medtr4g124300.1 | auxin-responsive AUX/IAA family protein | HC |... 94 1e-19
Medtr5g067350.2 | auxin response factor | HC | chr5:28450190-284... 92 3e-19
Medtr1g085750.1 | auxin-responsive AUX/IAA family protein | HC |... 87 1e-17
Medtr7g110790.1 | auxin-responsive AUX/IAA family protein | HC |... 84 6e-17
Medtr3g106850.1 | auxin-responsive AUX/IAA family protein | HC |... 76 2e-14
Medtr1g085750.2 | auxin-responsive AUX/IAA family protein | HC |... 68 5e-12
Medtr4g115075.1 | auxin-responsive AUX/IAA family protein | HC |... 66 2e-11
Medtr1g109510.1 | auxin-responsive AUX/IAA family protein | HC |... 58 4e-09
Medtr1g024025.1 | auxin response factor 2 | LC | chr1:7778460-77... 57 1e-08
Medtr4g128070.1 | auxin-responsive AUX/IAA family protein | HC |... 53 2e-07
Medtr8g027440.1 | auxin response factor 2 | HC | chr8:9733998-97... 50 1e-06
Medtr4g021580.1 | auxin response factor 2 | HC | chr4:7078271-70... 50 2e-06
Medtr2g005240.1 | auxin response factor 2 | HC | chr2:92911-1033... 48 7e-06
Medtr7g062540.1 | auxin response factor 2 | HC | chr7:22756278-2... 47 9e-06
>Medtr1g070830.1 | auxin-responsive AUX/IAA family protein | HC |
chr1:31369872-31371491 | 20130731
Length = 204
Score = 266 bits (680), Expect = 9e-72, Method: Compositional matrix adjust.
Identities = 137/204 (67%), Positives = 149/204 (73%), Gaps = 12/204 (5%)
Query: 1 MGSYETELNLKDTELRLGLPGCDELEKRSC--------KRSSMELEDSKCKXXXXXXXXX 52
+G+++TE+NLK TELRLGLPG DE+EK C KRSS E E S
Sbjct: 5 LGNHQTEMNLKATELRLGLPGSDEVEKLPCNFSVLRNNKRSSPE-EASDVDSISKSKLNS 63
Query: 53 XXXXXXXXEHDSDSVQPAKVQVVGWPPIRSYRKNSLQQKKTEQGDGAGMYVKVSMAGAPY 112
D D+ P+K QVVGWPPIRSYRKNSLQQKK E+ GMY+KVSMAGAPY
Sbjct: 64 SNGSSHTTNDDQDNAPPSKAQVVGWPPIRSYRKNSLQQKKGEE---VGMYLKVSMAGAPY 120
Query: 113 LRKIDLKVYNNYPELLKALENMFKCTFGEYSEREGYNGSEHAPTYEDKDGDWMLVGDVPW 172
LRKIDLKVY +Y ELLK LENMFKCT GEYSEREGYNGSE PTYEDKDGDWMLVGDVPW
Sbjct: 121 LRKIDLKVYKSYSELLKVLENMFKCTIGEYSEREGYNGSEFVPTYEDKDGDWMLVGDVPW 180
Query: 173 NMFMSSCKRLRIVKGSEAKGLSCL 196
MFMSSCKRLRI+KGSEAKGL C
Sbjct: 181 EMFMSSCKRLRIMKGSEAKGLGCF 204
>Medtr1g040675.1 | auxin response factor | HC |
chr1:15063378-15065770 | 20130731
Length = 186
Score = 225 bits (574), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 110/189 (58%), Positives = 133/189 (70%), Gaps = 6/189 (3%)
Query: 8 LNLKDTELRLGLPGCDELEKRSCKRSSMELEDSKCKXXXXXXXXXXXXXXXXXEHDSDSV 67
+ K TELRLGLPG DE + ++ S ++ + +S S
Sbjct: 1 MEFKATELRLGLPGTDEKDMKTIHGSVVKNNKRQLPQTSEESVSISKVSNDDQHVESSSA 60
Query: 68 QP-AKVQVVGWPPIRSYRKNSLQQKKTEQGDGAGMYVKVSMAGAPYLRKIDLKVYNNYPE 126
P AK ++VGWPPIRSYRKN+LQ+ + G+YVKVSM GAPYLRKIDL++Y YPE
Sbjct: 61 APPAKAKIVGWPPIRSYRKNTLQEAEV-----GGIYVKVSMDGAPYLRKIDLRIYGGYPE 115
Query: 127 LLKALENMFKCTFGEYSEREGYNGSEHAPTYEDKDGDWMLVGDVPWNMFMSSCKRLRIVK 186
LLKALE MFK T GEYSEREGY GSE+APTYEDKDGDWMLVGDVPW+MF++SCKRLRI+K
Sbjct: 116 LLKALETMFKLTIGEYSEREGYKGSEYAPTYEDKDGDWMLVGDVPWDMFVTSCKRLRIMK 175
Query: 187 GSEAKGLSC 195
G+EA+GL C
Sbjct: 176 GTEARGLGC 184
>Medtr1g076270.1 | auxin response factor | HC |
chr1:33944737-33945503 | 20130731
Length = 178
Score = 218 bits (555), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 107/191 (56%), Positives = 136/191 (71%), Gaps = 18/191 (9%)
Query: 3 SYETELNLKDTELRLGLPGCDELEKRSCKRSSMELEDSKCKXXXXXXXXXXXXXXXXXEH 62
+YE +LN+K TELRLGLPG ++ E++ K S+ K +
Sbjct: 6 AYENDLNMKATELRLGLPGTEQNEEQKAKISNKRPLTETSKDSGS-------------KT 52
Query: 63 DSDSVQPAKVQVVGWPPIRSYRKNSLQQKKTEQGDGAGMYVKVSMAGAPYLRKIDLKVYN 122
D+ P+K ++VGWPPIRSYRKNSLQ+ + +G+YVKVS+ GAPYLRKIDL+VY
Sbjct: 53 SDDAAPPSKAKIVGWPPIRSYRKNSLQE-----AEASGIYVKVSLDGAPYLRKIDLRVYG 107
Query: 123 NYPELLKALENMFKCTFGEYSEREGYNGSEHAPTYEDKDGDWMLVGDVPWNMFMSSCKRL 182
Y +LLKALE+MFK T G YSE+EGY GSE+ PTYEDKDGDWMLVGDVPW MF++SCKRL
Sbjct: 108 GYAQLLKALESMFKLTIGNYSEKEGYKGSEYEPTYEDKDGDWMLVGDVPWEMFVTSCKRL 167
Query: 183 RIVKGSEAKGL 193
RI+KG+EA+G+
Sbjct: 168 RIMKGTEARGV 178
>Medtr1g093350.1 | auxin response factor | HC |
chr1:33849453-33847986 | 20130731
Length = 178
Score = 218 bits (555), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 107/191 (56%), Positives = 136/191 (71%), Gaps = 18/191 (9%)
Query: 3 SYETELNLKDTELRLGLPGCDELEKRSCKRSSMELEDSKCKXXXXXXXXXXXXXXXXXEH 62
+YE +LN+K TELRLGLPG ++ E++ K S+ K +
Sbjct: 6 AYENDLNMKATELRLGLPGTEQNEEQKAKISNKRPLTETSKDSGS-------------KT 52
Query: 63 DSDSVQPAKVQVVGWPPIRSYRKNSLQQKKTEQGDGAGMYVKVSMAGAPYLRKIDLKVYN 122
D+ P+K ++VGWPPIRSYRKNSLQ+ + +G+YVKVS+ GAPYLRKIDL+VY
Sbjct: 53 SDDAAPPSKAKIVGWPPIRSYRKNSLQE-----AEASGIYVKVSLDGAPYLRKIDLRVYG 107
Query: 123 NYPELLKALENMFKCTFGEYSEREGYNGSEHAPTYEDKDGDWMLVGDVPWNMFMSSCKRL 182
Y +LLKALE+MFK T G YSE+EGY GSE+ PTYEDKDGDWMLVGDVPW MF++SCKRL
Sbjct: 108 GYAQLLKALESMFKLTIGNYSEKEGYKGSEYEPTYEDKDGDWMLVGDVPWEMFVTSCKRL 167
Query: 183 RIVKGSEAKGL 193
RI+KG+EA+G+
Sbjct: 168 RIMKGTEARGV 178
>Medtr1g040675.2 | auxin response factor | HC |
chr1:15063472-15065737 | 20130731
Length = 162
Score = 188 bits (478), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 94/166 (56%), Positives = 111/166 (66%), Gaps = 6/166 (3%)
Query: 8 LNLKDTELRLGLPGCDELEKRSCKRSSMELEDSKCKXXXXXXXXXXXXXXXXXEHDSDSV 67
+ K TELRLGLPG DE + ++ S ++ + +S S
Sbjct: 1 MEFKATELRLGLPGTDEKDMKTIHGSVVKNNKRQLPQTSEESVSISKVSNDDQHVESSSA 60
Query: 68 QP-AKVQVVGWPPIRSYRKNSLQQKKTEQGDGAGMYVKVSMAGAPYLRKIDLKVYNNYPE 126
P AK ++VGWPPIRSYRKN+LQ+ + G+YVKVSM GAPYLRKIDL++Y YPE
Sbjct: 61 APPAKAKIVGWPPIRSYRKNTLQEAEV-----GGIYVKVSMDGAPYLRKIDLRIYGGYPE 115
Query: 127 LLKALENMFKCTFGEYSEREGYNGSEHAPTYEDKDGDWMLVGDVPW 172
LLKALE MFK T GEYSEREGY GSE+APTYEDKDGDWMLVGDVPW
Sbjct: 116 LLKALETMFKLTIGEYSEREGYKGSEYAPTYEDKDGDWMLVGDVPW 161
>Medtr1g093240.1 | auxin-responsive AUX/IAA family protein | HC |
chr1:33903552-33900363 | 20130731
Length = 236
Score = 166 bits (420), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 101/218 (46%), Positives = 116/218 (53%), Gaps = 31/218 (14%)
Query: 8 LNLKDTELRLGLPGCD----------ELEKRSCKRSSMELEDSKCKXXXXXXXXXXXXXX 57
LNLK+TEL LGLPG E + S KR E D K
Sbjct: 8 LNLKETELCLGLPGGGGGGGGGGSEVETPRASGKRGFSETVDLKLNLQTKEDLNEKSASK 67
Query: 58 XXXEHDSDSVQPAKVQVVGWPPIRSYRKNSLQQK--------KTEQGDGAGMYVKVSMAG 109
+ PAK QVVGWPP+RSYRKN + QK KT A +VKVSM G
Sbjct: 68 EKTLLKDPAKPPAKAQVVGWPPVRSYRKNMMAQKVNNTEDTEKTTSNTTAAAFVKVSMDG 127
Query: 110 APYLRKIDLKVYNNYPELLKALENMFKC-TFGEYSER------------EGYNGSEHAPT 156
APYLRK+DL +Y Y +L AL MF T G Y + + N SE+ PT
Sbjct: 128 APYLRKVDLTMYKTYKDLSDALAKMFSSFTTGNYGAQGMIDFMNESKLMDLLNSSEYVPT 187
Query: 157 YEDKDGDWMLVGDVPWNMFMSSCKRLRIVKGSEAKGLS 194
YEDKDGDWMLVGDVPW MF+ SCKRLRI+KGSEA GL+
Sbjct: 188 YEDKDGDWMLVGDVPWEMFVGSCKRLRIMKGSEAIGLA 225
>Medtr1g093240.2 | auxin-responsive AUX/IAA family protein | HC |
chr1:33903552-33900946 | 20130731
Length = 239
Score = 165 bits (418), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 101/217 (46%), Positives = 115/217 (52%), Gaps = 31/217 (14%)
Query: 8 LNLKDTELRLGLPGCD----------ELEKRSCKRSSMELEDSKCKXXXXXXXXXXXXXX 57
LNLK+TEL LGLPG E + S KR E D K
Sbjct: 8 LNLKETELCLGLPGGGGGGGGGGSEVETPRASGKRGFSETVDLKLNLQTKEDLNEKSASK 67
Query: 58 XXXEHDSDSVQPAKVQVVGWPPIRSYRKNSLQQK--------KTEQGDGAGMYVKVSMAG 109
+ PAK QVVGWPP+RSYRKN + QK KT A +VKVSM G
Sbjct: 68 EKTLLKDPAKPPAKAQVVGWPPVRSYRKNMMAQKVNNTEDTEKTTSNTTAAAFVKVSMDG 127
Query: 110 APYLRKIDLKVYNNYPELLKALENMFKC-TFGEYSER------------EGYNGSEHAPT 156
APYLRK+DL +Y Y +L AL MF T G Y + + N SE+ PT
Sbjct: 128 APYLRKVDLTMYKTYKDLSDALAKMFSSFTTGNYGAQGMIDFMNESKLMDLLNSSEYVPT 187
Query: 157 YEDKDGDWMLVGDVPWNMFMSSCKRLRIVKGSEAKGL 193
YEDKDGDWMLVGDVPW MF+ SCKRLRI+KGSEA GL
Sbjct: 188 YEDKDGDWMLVGDVPWEMFVGSCKRLRIMKGSEAIGL 224
>Medtr2g101500.1 | auxin-responsive AUX/IAA family protein | HC |
chr2:43637105-43634220 | 20130731
Length = 326
Score = 160 bits (406), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 85/147 (57%), Positives = 98/147 (66%), Gaps = 22/147 (14%)
Query: 70 AKVQVVGWPPIRSYRKNSLQQKKTEQGDGAG-------MYVKVSMAGAPYLRKIDLKVYN 122
AK QVVGWPPIRS+RKN++ T+ D A +YVKVSM GAPYLRK+DLK YN
Sbjct: 169 AKAQVVGWPPIRSFRKNTMASNLTKNNDEAEGKPEFDCLYVKVSMDGAPYLRKVDLKTYN 228
Query: 123 NYPELLKALENMFKC-TFG--------------EYSEREGYNGSEHAPTYEDKDGDWMLV 167
NY EL ALE MF C T G E S R+ +GSE+ TYEDKDGDWMLV
Sbjct: 229 NYMELSSALEKMFTCFTIGQCNSPGLPGKDGLSESSLRDLLHGSEYVLTYEDKDGDWMLV 288
Query: 168 GDVPWNMFMSSCKRLRIVKGSEAKGLS 194
GDVPW MF SC+RLRI+KGS+A GL+
Sbjct: 289 GDVPWGMFADSCRRLRIMKGSDAIGLA 315
>Medtr6g488150.1 | auxin response factor | HC |
chr6:33216291-33219398 | 20130731
Length = 254
Score = 160 bits (404), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 102/229 (44%), Positives = 125/229 (54%), Gaps = 42/229 (18%)
Query: 8 LNLKDTELRLGLPGC-------DELEKRS----CKRSSM----------ELEDSKCKXXX 46
LNLK TELRLGLPG D LE+++ C +S+ ++ K
Sbjct: 15 LNLKATELRLGLPGSESPERDNDLLEEKNAYSLCMLNSLFSGAKRGFSDAIDMRKSSNQQ 74
Query: 47 XXXXXXXXXXXXXXEHDSDSVQPAKVQVVGWPPIRSYRKNSL--QQKKTEQGD----GAG 100
+ S AK QVVGWPPIRS+RKNS+ Q +K + D
Sbjct: 75 GSVAKDQTNPLNEKKKSQISGSAAKEQVVGWPPIRSFRKNSMATQSQKNDNDDVEAKSGC 134
Query: 101 MYVKVSMAGAPYLRKIDLKVYNNYPELLKALENMFKC----------TFGEYSEREG--- 147
+YVKVSM GAPYLRK+DLK++ Y EL ALE MF C FG+ + E
Sbjct: 135 LYVKVSMDGAPYLRKVDLKIFGTYKELSSALEKMFSCFTISQFGSHGVFGQGNVCESRLM 194
Query: 148 --YNGSEHAPTYEDKDGDWMLVGDVPWNMFMSSCKRLRIVKGSEAKGLS 194
+GSE+ TYEDKDGDWMLVGDVPW MF+ SCKRLRI+K SEA GL+
Sbjct: 195 DLLHGSEYVLTYEDKDGDWMLVGDVPWKMFIDSCKRLRIMKSSEAIGLA 243
>Medtr1g080860.1 | auxin-responsive AUX/IAA family protein | HC |
chr1:35977175-35973245 | 20130731
Length = 253
Score = 158 bits (399), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 103/228 (45%), Positives = 123/228 (53%), Gaps = 41/228 (17%)
Query: 8 LNLKDTELRLGLPGC-DELE---KRSC-KRSSMELEDSKCKXXXX---------XXXXXX 53
+N ++TELRLGLPG D E K SC KR E + K
Sbjct: 15 INFEETELRLGLPGAGDHGESPVKNSCGKRGFSETANVDLKLNLSPINDSASSSSTIASV 74
Query: 54 XXXXXXXEHDSDSVQP---AKVQVVGWPPIRSYRKN--SLQQKKTEQ---------GDGA 99
S +V P AK QVVGWPP+RS+RKN ++ QK + G G
Sbjct: 75 AENKGKDTTTSATVSPPPRAKAQVVGWPPVRSFRKNIVNVHQKSNSETEVDKSISGGGGN 134
Query: 100 GMYVKVSMAGAPYLRKIDLKVYNNYPELLKALENMF-------------KCTFGEYSERE 146
G +VKVSM GAPYLRK+DLK+Y +Y EL AL MF K E +
Sbjct: 135 GAFVKVSMDGAPYLRKVDLKLYKSYQELSDALAKMFSSFTIDNCGSQVTKDFMNESKLID 194
Query: 147 GYNGSEHAPTYEDKDGDWMLVGDVPWNMFMSSCKRLRIVKGSEAKGLS 194
NGS++ PTYEDKDGDWMLVGDVPW MF+ SCKRLRI+KGSEA GL+
Sbjct: 195 LLNGSDYVPTYEDKDGDWMLVGDVPWEMFVQSCKRLRIMKGSEAIGLA 242
>Medtr1g080860.2 | auxin-responsive AUX/IAA family protein | HC |
chr1:35977175-35973245 | 20130731
Length = 243
Score = 158 bits (399), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 103/227 (45%), Positives = 122/227 (53%), Gaps = 41/227 (18%)
Query: 8 LNLKDTELRLGLPGC-DELE---KRSC-KRSSMELEDSKCKXXXX---------XXXXXX 53
+N ++TELRLGLPG D E K SC KR E + K
Sbjct: 15 INFEETELRLGLPGAGDHGESPVKNSCGKRGFSETANVDLKLNLSPINDSASSSSTIASV 74
Query: 54 XXXXXXXEHDSDSVQP---AKVQVVGWPPIRSYRKN--SLQQKKTEQ---------GDGA 99
S +V P AK QVVGWPP+RS+RKN ++ QK + G G
Sbjct: 75 AENKGKDTTTSATVSPPPRAKAQVVGWPPVRSFRKNIVNVHQKSNSETEVDKSISGGGGN 134
Query: 100 GMYVKVSMAGAPYLRKIDLKVYNNYPELLKALENMF-------------KCTFGEYSERE 146
G +VKVSM GAPYLRK+DLK+Y +Y EL AL MF K E +
Sbjct: 135 GAFVKVSMDGAPYLRKVDLKLYKSYQELSDALAKMFSSFTIDNCGSQVTKDFMNESKLID 194
Query: 147 GYNGSEHAPTYEDKDGDWMLVGDVPWNMFMSSCKRLRIVKGSEAKGL 193
NGS++ PTYEDKDGDWMLVGDVPW MF+ SCKRLRI+KGSEA GL
Sbjct: 195 LLNGSDYVPTYEDKDGDWMLVGDVPWEMFVQSCKRLRIMKGSEAIGL 241
>Medtr5g067350.1 | auxin response factor | HC |
chr5:28450190-28454050 | 20130731
Length = 347
Score = 156 bits (395), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 84/153 (54%), Positives = 102/153 (66%), Gaps = 20/153 (13%)
Query: 62 HDSDSVQPA-KVQVVGWPPIRSYRKNSLQ--QKKTEQ-----GDGAGMYVKVSMAGAPYL 113
++ +S PA K QVVGWPPIRS+RKNSL K TE+ G G ++VKVSM GAPYL
Sbjct: 184 NNGNSTAPASKAQVVGWPPIRSFRKNSLTTASKNTEEVDGKLGSGGAVFVKVSMDGAPYL 243
Query: 114 RKIDLKVYNNYPELLKALENMFKC-TFG-----------EYSEREGYNGSEHAPTYEDKD 161
RK+DLK Y Y EL +LE MF C T G E R+ +GSE+ TYEDKD
Sbjct: 244 RKVDLKNYTAYSELSSSLEKMFSCFTIGQCESHGNQMLNETKLRDLLHGSEYVITYEDKD 303
Query: 162 GDWMLVGDVPWNMFMSSCKRLRIVKGSEAKGLS 194
GDWMLVGDVPW MF+ +C+RLRI+K S+A GL+
Sbjct: 304 GDWMLVGDVPWEMFIDTCRRLRIMKSSDAIGLA 336
>Medtr1g070520.1 | auxin-responsive AUX/IAA family protein | HC |
chr1:31340838-31337022 | 20130731
Length = 245
Score = 156 bits (394), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 80/157 (50%), Positives = 97/157 (61%), Gaps = 24/157 (15%)
Query: 62 HDSDSVQPAKVQVVGWPPIRSYRKNSLQQKKTEQG----------DGAGMYVKVSMAGAP 111
DS + PAK QVVGWPP+RS+RKN +K+ +G + +VKVSM GAP
Sbjct: 78 SDSGAKPPAKAQVVGWPPVRSFRKNMFAAQKSNEGSEESEKKNSNNNPISFVKVSMDGAP 137
Query: 112 YLRKIDLKVYNNYPELLKALENMFKCTFGEYSEREGY--------------NGSEHAPTY 157
YLRK+DLK+Y +YPEL AL MF E +G N S++ PTY
Sbjct: 138 YLRKVDLKMYKSYPELSDALAKMFNSFTTGNCESQGIKDFMNESNKLMDLLNSSDYVPTY 197
Query: 158 EDKDGDWMLVGDVPWNMFMSSCKRLRIVKGSEAKGLS 194
EDKDGDWMLVGDVPW MF+ SCKRLRI+KG EA GL+
Sbjct: 198 EDKDGDWMLVGDVPWEMFIDSCKRLRIMKGKEAIGLA 234
>Medtr8g067530.1 | auxin-responsive AUX/IAA family protein | HC |
chr8:28204029-28199991 | 20130731
Length = 356
Score = 154 bits (390), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 82/152 (53%), Positives = 99/152 (65%), Gaps = 21/152 (13%)
Query: 64 SDSVQPAKVQVVGWPPIRSYRKNSL--QQKKTEQGDG----AGMYVKVSMAGAPYLRKID 117
S S AK QVVGWPPIRS+RKNSL K ++ DG A ++VKVSM GAPYLRK+D
Sbjct: 194 SGSAPAAKAQVVGWPPIRSFRKNSLATTSKNNDEVDGKPGAAALFVKVSMDGAPYLRKVD 253
Query: 118 LKVYNNYPELLKALENMFKC-TFGEYSEREG--------------YNGSEHAPTYEDKDG 162
L+ Y Y EL LE MF C T G+ G +GSE+ TYEDKDG
Sbjct: 254 LRNYTTYQELSSDLEKMFSCFTLGQCGSHGGPGKEMLSESKLKDFLHGSEYVVTYEDKDG 313
Query: 163 DWMLVGDVPWNMFMSSCKRLRIVKGSEAKGLS 194
DWMLVGDVPW+MF+ +CKRL+I+KGS+A GL+
Sbjct: 314 DWMLVGDVPWDMFIDTCKRLKIMKGSDAIGLA 345
>Medtr5g030710.2 | auxin-responsive AUX/IAA family protein | HC |
chr5:13126019-13120497 | 20130731
Length = 335
Score = 149 bits (377), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 77/147 (52%), Positives = 98/147 (66%), Gaps = 22/147 (14%)
Query: 70 AKVQVVGWPPIRSYRKNSL---QQKKTEQGDG----AGMYVKVSMAGAPYLRKIDLKVYN 122
+K QVVGWPPIRS+RKNS+ + ++ DG A ++VKVSM GAPYLRK+DL+ Y
Sbjct: 178 SKAQVVGWPPIRSFRKNSMATASKNNNDEVDGKPGPAALFVKVSMDGAPYLRKVDLRTYA 237
Query: 123 NYPELLKALENMFKC-TFG--------------EYSEREGYNGSEHAPTYEDKDGDWMLV 167
Y +L ALE MF C T G E R+ +GSE+ TYEDKDGDWMLV
Sbjct: 238 TYQQLSSALEKMFSCFTLGQCGSHGAPGKEMMSESKLRDLLHGSEYVLTYEDKDGDWMLV 297
Query: 168 GDVPWNMFMSSCKRLRIVKGSEAKGLS 194
GDVPW MF+ +C+RL+I+KGS+A GL+
Sbjct: 298 GDVPWEMFIDTCRRLKIMKGSDAIGLA 324
>Medtr5g030710.1 | auxin-responsive AUX/IAA family protein | HC |
chr5:13126144-13120365 | 20130731
Length = 335
Score = 149 bits (377), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 77/147 (52%), Positives = 98/147 (66%), Gaps = 22/147 (14%)
Query: 70 AKVQVVGWPPIRSYRKNSL---QQKKTEQGDG----AGMYVKVSMAGAPYLRKIDLKVYN 122
+K QVVGWPPIRS+RKNS+ + ++ DG A ++VKVSM GAPYLRK+DL+ Y
Sbjct: 178 SKAQVVGWPPIRSFRKNSMATASKNNNDEVDGKPGPAALFVKVSMDGAPYLRKVDLRTYA 237
Query: 123 NYPELLKALENMFKC-TFG--------------EYSEREGYNGSEHAPTYEDKDGDWMLV 167
Y +L ALE MF C T G E R+ +GSE+ TYEDKDGDWMLV
Sbjct: 238 TYQQLSSALEKMFSCFTLGQCGSHGAPGKEMMSESKLRDLLHGSEYVLTYEDKDGDWMLV 297
Query: 168 GDVPWNMFMSSCKRLRIVKGSEAKGLS 194
GDVPW MF+ +C+RL+I+KGS+A GL+
Sbjct: 298 GDVPWEMFIDTCRRLKIMKGSDAIGLA 324
>Medtr7g096090.1 | auxin-responsive AUX/IAA family protein | HC |
chr7:38527122-38532646 | 20130731
Length = 250
Score = 145 bits (366), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 77/145 (53%), Positives = 93/145 (64%), Gaps = 19/145 (13%)
Query: 69 PAKVQVVGWPPIRSYRKNSLQQKKTEQGD------GAGMYVKVSMAGAPYLRKIDLKVYN 122
PAK QVVGWPP+RSYRKN L +K+E A +VKVSM GAPYLRK+DLK+Y
Sbjct: 95 PAKAQVVGWPPVRSYRKNMLAMQKSESEKNSSSNFNAITFVKVSMDGAPYLRKVDLKMYT 154
Query: 123 NYPELLKALENMFKCTFGEYSEREG-------------YNGSEHAPTYEDKDGDWMLVGD 169
+Y +L +L MF E +G N S++ PTYEDKDGDWMLVGD
Sbjct: 155 SYSQLSDSLGKMFSSFTIGNCESQGMKDFMNESKLMDLLNNSDYVPTYEDKDGDWMLVGD 214
Query: 170 VPWNMFMSSCKRLRIVKGSEAKGLS 194
VPW MF+ SCKRLRI+KG EA G++
Sbjct: 215 VPWEMFVESCKRLRIMKGKEAIGIA 239
>Medtr8g103030.1 | auxin-responsive AUX/IAA family protein | HC |
chr8:43394828-43391289 | 20130731
Length = 293
Score = 143 bits (360), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 81/146 (55%), Positives = 94/146 (64%), Gaps = 21/146 (14%)
Query: 70 AKVQVVGWPPIRSYRKNSL-QQKKTEQGDGAG----MYVKVSMAGAPYLRKIDLKVYNNY 124
+K QVVGWPPIRS+RKNS+ Q + D +YVKVSM GAPYLRK+DL +++Y
Sbjct: 137 SKAQVVGWPPIRSFRKNSMVSQPQKNDADAEAKSECLYVKVSMEGAPYLRKVDLNGFSSY 196
Query: 125 PELLKALENMFKC----TFGEY--SEREG----------YNGSEHAPTYEDKDGDWMLVG 168
EL ALE MF C G Y S RE +GSE+ TYEDKDGDWMLVG
Sbjct: 197 RELSSALEKMFSCFTISQCGSYGVSCREKNLSESRLVDLLHGSEYVLTYEDKDGDWMLVG 256
Query: 169 DVPWNMFMSSCKRLRIVKGSEAKGLS 194
DVPW MF SCKRLRI+K SEA GL+
Sbjct: 257 DVPWEMFTESCKRLRIMKSSEAIGLA 282
>Medtr4g011880.1 | auxin-responsive AUX/IAA family protein | HC |
chr4:3041610-3037433 | 20130731
Length = 178
Score = 137 bits (344), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 88/187 (47%), Positives = 108/187 (57%), Gaps = 25/187 (13%)
Query: 8 LNLKDTELRLGLPGCDELEKRSCKRSSMELEDSKCKXXXXXXXXXXXXXXXXXEHDSDSV 67
L+ TELRLGLP C E +K KR E++ + D
Sbjct: 6 FGLEITELRLGLP-CGEPQKNEKKRMFSEIDGGE----------------EENGGSGDQK 48
Query: 68 QPAKVQVVGWPPIRSYRKNSLQQKKTEQGDGAGMYVKVSMAGAPYLRKIDLKVYNNYPEL 127
K QVVGWPP+ SYRK ++ + G+ MY+KVSM GAPYLRKIDL ++ Y EL
Sbjct: 49 IEKKNQVVGWPPVCSYRKKNMNE-------GSKMYMKVSMDGAPYLRKIDLGLHKGYLEL 101
Query: 128 LKALENMFKCTFGEYSEREGYNGSEHAPTYEDKDGDWMLVGDVPWNMFMSSCKRLRIVKG 187
ALE +F C E + ++ N EH P YEDKDGDWMLVGDVPW MF+ SCKRLRI+K
Sbjct: 102 ALALEKLFGCCGIEEALKDADN-CEHVPIYEDKDGDWMLVGDVPWEMFIESCKRLRIMKR 160
Query: 188 SEAKGLS 194
S+AKG
Sbjct: 161 SDAKGFG 167
>Medtr1g093240.3 | auxin-responsive AUX/IAA family protein | HC |
chr1:33903407-33900363 | 20130731
Length = 204
Score = 134 bits (336), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 85/196 (43%), Positives = 97/196 (49%), Gaps = 31/196 (15%)
Query: 8 LNLKDTELRLGLPGCD----------ELEKRSCKRSSMELEDSKCKXXXXXXXXXXXXXX 57
LNLK+TEL LGLPG E + S KR E D K
Sbjct: 8 LNLKETELCLGLPGGGGGGGGGGSEVETPRASGKRGFSETVDLKLNLQTKEDLNEKSASK 67
Query: 58 XXXEHDSDSVQPAKVQVVGWPPIRSYRKNSLQQK--------KTEQGDGAGMYVKVSMAG 109
+ PAK QVVGWPP+RSYRKN + QK KT A +VKVSM G
Sbjct: 68 EKTLLKDPAKPPAKAQVVGWPPVRSYRKNMMAQKVNNTEDTEKTTSNTTAAAFVKVSMDG 127
Query: 110 APYLRKIDLKVYNNYPELLKALENMFKC-TFGEYSER------------EGYNGSEHAPT 156
APYLRK+DL +Y Y +L AL MF T G Y + + N SE+ PT
Sbjct: 128 APYLRKVDLTMYKTYKDLSDALAKMFSSFTTGNYGAQGMIDFMNESKLMDLLNSSEYVPT 187
Query: 157 YEDKDGDWMLVGDVPW 172
YEDKDGDWMLVGDVPW
Sbjct: 188 YEDKDGDWMLVGDVPW 203
>Medtr1g069495.1 | auxin response factor | HC |
chr1:30104004-30099851 | 20130731
Length = 272
Score = 110 bits (276), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 65/177 (36%), Positives = 87/177 (49%), Gaps = 56/177 (31%)
Query: 73 QVVGWPPIRSYRKNSLQ-----------------------QKKTEQGDGAGM-------- 101
QVVGWPP+RSYR NS +K T+ G+
Sbjct: 82 QVVGWPPLRSYRVNSFNANAKSTEAFNSVAEKSKNNNIVVRKSTDNGNDDNHINIKEKRN 141
Query: 102 -----YVKVSMAGAPYLRKIDLKVYNNYPELLKALENMFKCTFGEYSEREGYNGSEH--- 153
+VKV+M G P RK+DL +++Y L + LE+MF + + + G NG +H
Sbjct: 142 LRKSPFVKVNMDGIPIGRKVDLSAHSSYETLAQTLEDMFDESTTSVTSK-GSNGEDHNMT 200
Query: 154 ----------------APTYEDKDGDWMLVGDVPWNMFMSSCKRLRIVKGSEAKGLS 194
TYEDK+GDWMLVGDVPW MF+SS +RLRI++ SEA GL+
Sbjct: 201 TRGERHSILLDGSSKFVLTYEDKEGDWMLVGDVPWGMFLSSVRRLRIMRTSEANGLA 257
>Medtr8g014520.1 | auxin response factor | HC | chr8:4572622-4568904
| 20130731
Length = 271
Score = 102 bits (253), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 58/157 (36%), Positives = 81/157 (51%), Gaps = 37/157 (23%)
Query: 70 AKVQVVGWPPIRSYRKN----SLQQKKTEQ-----------------GDGAGMYVKVSMA 108
A VVGWPPIRS+RKN S + TE G G++VK++M
Sbjct: 104 AASPVVGWPPIRSFRKNIASGSSSKPPTESRPMVQDKVIVDSNKPISNSGKGLFVKINMD 163
Query: 109 GAPYLRKIDLKVYNNYPELLKALENMFKCTFGEYSEREGYN----------------GSE 152
G P RKID+ Y++Y +L A++++F+ E + G N E
Sbjct: 164 GVPIGRKIDINAYDSYEKLSSAVDDLFRGLLEEINLSHGINKKQEEEDTGMKGSLTGSGE 223
Query: 153 HAPTYEDKDGDWMLVGDVPWNMFMSSCKRLRIVKGSE 189
+ YED +GD MLVGDVPW+MF+S+ KRLR+ K S+
Sbjct: 224 YTLVYEDNEGDKMLVGDVPWHMFVSTVKRLRVSKSSD 260
>Medtr8g014520.2 | auxin response factor | HC | chr8:4572622-4568904
| 20130731
Length = 268
Score = 102 bits (253), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 58/157 (36%), Positives = 81/157 (51%), Gaps = 37/157 (23%)
Query: 70 AKVQVVGWPPIRSYRKN----SLQQKKTEQ-----------------GDGAGMYVKVSMA 108
A VVGWPPIRS+RKN S + TE G G++VK++M
Sbjct: 104 AASPVVGWPPIRSFRKNIASGSSSKPPTESRPMVQDKVIVDSNKPISNSGKGLFVKINMD 163
Query: 109 GAPYLRKIDLKVYNNYPELLKALENMFKCTFGEYSEREGYN----------------GSE 152
G P RKID+ Y++Y +L A++++F+ E + G N E
Sbjct: 164 GVPIGRKIDINAYDSYEKLSSAVDDLFRGLLEEINLSHGINKKQEEEDTGMKGSLTGSGE 223
Query: 153 HAPTYEDKDGDWMLVGDVPWNMFMSSCKRLRIVKGSE 189
+ YED +GD MLVGDVPW+MF+S+ KRLR+ K S+
Sbjct: 224 YTLVYEDNEGDKMLVGDVPWHMFVSTVKRLRVSKSSD 260
>Medtr2g100780.1 | auxin-responsive AUX/IAA family protein | HC |
chr2:43340473-43336605 | 20130731
Length = 269
Score = 99.0 bits (245), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 54/163 (33%), Positives = 80/163 (49%), Gaps = 42/163 (25%)
Query: 74 VVGWPPIRSYRKN------------------------SLQQKKTEQGDGAGMYVKVSMAG 109
VVGWPPIRS+RKN S +K + G G++VK++M G
Sbjct: 97 VVGWPPIRSFRKNLATSSSSKPSPPESQTQQDMHNNVSAGKKPIDNNYGKGLFVKINMDG 156
Query: 110 APYLRKIDLKVYNNYPELLKALENMFKCTFGEYSEREGYNGS------------------ 151
P RK+DL Y++Y L A++++F+ + G+
Sbjct: 157 VPIGRKVDLNAYHSYDNLSSAVDDLFRGLLKAQRDSSACGGNNKKEEEEKVITGLLDGSG 216
Query: 152 EHAPTYEDKDGDWMLVGDVPWNMFMSSCKRLRIVKGSEAKGLS 194
E+ YED +GD MLVGDVPW+MF+S+ KRLR++K +E +
Sbjct: 217 EYTLVYEDNEGDRMLVGDVPWHMFVSTVKRLRVLKSTELSAFT 259
>Medtr2g100780.4 | auxin-responsive AUX/IAA family protein | HC |
chr2:43340807-43336605 | 20130731
Length = 269
Score = 99.0 bits (245), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 54/163 (33%), Positives = 80/163 (49%), Gaps = 42/163 (25%)
Query: 74 VVGWPPIRSYRKN------------------------SLQQKKTEQGDGAGMYVKVSMAG 109
VVGWPPIRS+RKN S +K + G G++VK++M G
Sbjct: 97 VVGWPPIRSFRKNLATSSSSKPSPPESQTQQDMHNNVSAGKKPIDNNYGKGLFVKINMDG 156
Query: 110 APYLRKIDLKVYNNYPELLKALENMFKCTFGEYSEREGYNGS------------------ 151
P RK+DL Y++Y L A++++F+ + G+
Sbjct: 157 VPIGRKVDLNAYHSYDNLSSAVDDLFRGLLKAQRDSSACGGNNKKEEEEKVITGLLDGSG 216
Query: 152 EHAPTYEDKDGDWMLVGDVPWNMFMSSCKRLRIVKGSEAKGLS 194
E+ YED +GD MLVGDVPW+MF+S+ KRLR++K +E +
Sbjct: 217 EYTLVYEDNEGDRMLVGDVPWHMFVSTVKRLRVLKSTELSAFT 259
>Medtr2g100780.2 | auxin-responsive AUX/IAA family protein | HC |
chr2:43340473-43336605 | 20130731
Length = 269
Score = 99.0 bits (245), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 54/163 (33%), Positives = 80/163 (49%), Gaps = 42/163 (25%)
Query: 74 VVGWPPIRSYRKN------------------------SLQQKKTEQGDGAGMYVKVSMAG 109
VVGWPPIRS+RKN S +K + G G++VK++M G
Sbjct: 97 VVGWPPIRSFRKNLATSSSSKPSPPESQTQQDMHNNVSAGKKPIDNNYGKGLFVKINMDG 156
Query: 110 APYLRKIDLKVYNNYPELLKALENMFKCTFGEYSEREGYNGS------------------ 151
P RK+DL Y++Y L A++++F+ + G+
Sbjct: 157 VPIGRKVDLNAYHSYDNLSSAVDDLFRGLLKAQRDSSACGGNNKKEEEEKVITGLLDGSG 216
Query: 152 EHAPTYEDKDGDWMLVGDVPWNMFMSSCKRLRIVKGSEAKGLS 194
E+ YED +GD MLVGDVPW+MF+S+ KRLR++K +E +
Sbjct: 217 EYTLVYEDNEGDRMLVGDVPWHMFVSTVKRLRVLKSTELSAFT 259
>Medtr2g100780.3 | auxin-responsive AUX/IAA family protein | HC |
chr2:43340462-43336605 | 20130731
Length = 268
Score = 98.6 bits (244), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 54/163 (33%), Positives = 80/163 (49%), Gaps = 42/163 (25%)
Query: 74 VVGWPPIRSYRKN------------------------SLQQKKTEQGDGAGMYVKVSMAG 109
VVGWPPIRS+RKN S +K + G G++VK++M G
Sbjct: 97 VVGWPPIRSFRKNLATSSSSKPSPPESQTQQDMHNNVSAGKKPIDNNYGKGLFVKINMDG 156
Query: 110 APYLRKIDLKVYNNYPELLKALENMFKCTFGEYSEREGYNGS------------------ 151
P RK+DL Y++Y L A++++F+ + G+
Sbjct: 157 VPIGRKVDLNAYHSYDNLSSAVDDLFRGLLKAQRDSSACGGNNKKEEEEKVITGLLDGSG 216
Query: 152 EHAPTYEDKDGDWMLVGDVPWNMFMSSCKRLRIVKGSEAKGLS 194
E+ YED +GD MLVGDVPW+MF+S+ KRLR++K +E +
Sbjct: 217 EYTLVYEDNEGDRMLVGDVPWHMFVSTVKRLRVLKSTELSAFT 259
>Medtr2g102490.1 | auxin-responsive AUX/IAA family protein | HC |
chr2:44155116-44156253 | 20130731
Length = 198
Score = 97.4 bits (241), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 49/98 (50%), Positives = 62/98 (63%), Gaps = 13/98 (13%)
Query: 102 YVKVSMAGAPYLRKIDLKVYNNYPELLKALENMFKCTFGEYSEREGY-----------NG 150
YVKV++ GAPYLRK+DL+VY Y LL AL MF ++ R N
Sbjct: 88 YVKVAVDGAPYLRKVDLEVYECYDNLLTALNTMFSTNC--FTIRNDLMNEKKFMDSRKNT 145
Query: 151 SEHAPTYEDKDGDWMLVGDVPWNMFMSSCKRLRIVKGS 188
+E+ TYEDKDGDWML+GDVPW MF+ SCKR+R++ S
Sbjct: 146 NEYLATYEDKDGDWMLLGDVPWKMFVESCKRIRLMISS 183
>Medtr6g488150.2 | auxin response factor | HC |
chr6:33216341-33219347 | 20130731
Length = 193
Score = 96.7 bits (239), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 66/163 (40%), Positives = 83/163 (50%), Gaps = 28/163 (17%)
Query: 8 LNLKDTELRLGLPGC-------DELEKRS----CKRSSM----------ELEDSKCKXXX 46
LNLK TELRLGLPG D LE+++ C +S+ ++ K
Sbjct: 15 LNLKATELRLGLPGSESPERDNDLLEEKNAYSLCMLNSLFSGAKRGFSDAIDMRKSSNQQ 74
Query: 47 XXXXXXXXXXXXXXEHDSDSVQPAKVQVVGWPPIRSYRKNSL--QQKKTEQGD----GAG 100
+ S AK QVVGWPPIRS+RKNS+ Q +K + D
Sbjct: 75 GSVAKDQTNPLNEKKKSQISGSAAKEQVVGWPPIRSFRKNSMATQSQKNDNDDVEAKSGC 134
Query: 101 MYVKVSMAGAPYLRKIDLKVYNNYPELLKALENMFKC-TFGEY 142
+YVKVSM GAPYLRK+DLK++ Y EL ALE MF C T E+
Sbjct: 135 LYVKVSMDGAPYLRKVDLKIFGTYKELSSALEKMFSCFTISEF 177
>Medtr4g124300.1 | auxin-responsive AUX/IAA family protein | HC |
chr4:51327848-51326632 | 20130731
Length = 184
Score = 93.6 bits (231), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 49/126 (38%), Positives = 78/126 (61%), Gaps = 6/126 (4%)
Query: 64 SDSVQPAKVQVVGWPPI-RSYRKNSLQQKKTEQGDGAGMYVKVSMAGAPYLRKIDLKVYN 122
S Q + + WPPI +S +++L +K+ ++VKV M G P RK++L ++
Sbjct: 62 SSQSQLPREETCDWPPINKSILRSTLAEKQR-----PSLFVKVYMEGIPIGRKLNLLEHH 116
Query: 123 NYPELLKALENMFKCTFGEYSEREGYNGSEHAPTYEDKDGDWMLVGDVPWNMFMSSCKRL 182
+Y L+KAL +MF+ T + + + + H TYED++GDWM+VGDVPW MF+SS KRL
Sbjct: 117 SYDGLIKALCHMFRTTILCPNSQPLNSWNFHVLTYEDQEGDWMMVGDVPWEMFLSSVKRL 176
Query: 183 RIVKGS 188
+I + +
Sbjct: 177 KITRAN 182
>Medtr5g067350.2 | auxin response factor | HC |
chr5:28450190-28454050 | 20130731
Length = 272
Score = 92.4 bits (228), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 48/84 (57%), Positives = 57/84 (67%), Gaps = 8/84 (9%)
Query: 62 HDSDSVQPA-KVQVVGWPPIRSYRKNSLQ--QKKTEQ-----GDGAGMYVKVSMAGAPYL 113
++ +S PA K QVVGWPPIRS+RKNSL K TE+ G G ++VKVSM GAPYL
Sbjct: 184 NNGNSTAPASKAQVVGWPPIRSFRKNSLTTASKNTEEVDGKLGSGGAVFVKVSMDGAPYL 243
Query: 114 RKIDLKVYNNYPELLKALENMFKC 137
RK+DLK Y Y EL +LE MF C
Sbjct: 244 RKVDLKNYTAYSELSSSLEKMFSC 267
>Medtr1g085750.1 | auxin-responsive AUX/IAA family protein | HC |
chr1:38333347-38334717 | 20130731
Length = 176
Score = 86.7 bits (213), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 48/115 (41%), Positives = 63/115 (54%), Gaps = 13/115 (11%)
Query: 77 WPPIRSYRKNSLQQKKTEQGD----GAGMYVKVSMAGAPYLRKIDLKVYNNYPELLKALE 132
W PI QQ+ E D + +VKV M G P RK++L +N Y EL+ LE
Sbjct: 64 WQPI--------QQQGGEVNDCSDYNSAFFVKVYMEGIPIGRKLNLLAHNGYHELVNTLE 115
Query: 133 NMFKCTFGEYSEREGYNGSE-HAPTYEDKDGDWMLVGDVPWNMFMSSCKRLRIVK 186
MF T +E +G H TYED +GD ++VGDVPW MF+SS KRL+I +
Sbjct: 116 QMFDTTILWGTEMDGVQSERCHVLTYEDGEGDLIMVGDVPWEMFLSSVKRLKITR 170
>Medtr7g110790.1 | auxin-responsive AUX/IAA family protein | HC |
chr7:45409781-45408778 | 20130731
Length = 161
Score = 84.3 bits (207), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 41/91 (45%), Positives = 59/91 (64%), Gaps = 1/91 (1%)
Query: 97 DGAGMYVKVSMAGAPYLRKIDLKVYNNYPELLKALENMFKCTFGEYSEREGYNGSE-HAP 155
D +YVKV M G P RK+++ + +Y EL+K LE+MF T +E +G H
Sbjct: 65 DYNSLYVKVYMEGIPIGRKLNILAHQSYHELVKTLEHMFDTTILWGNEMDGVQPERCHVL 124
Query: 156 TYEDKDGDWMLVGDVPWNMFMSSCKRLRIVK 186
TYED++GD ++VGDVPW MF+S+ KRL+I +
Sbjct: 125 TYEDEEGDLVMVGDVPWEMFLSTVKRLKITR 155
>Medtr3g106850.1 | auxin-responsive AUX/IAA family protein | HC |
chr3:49381656-49382979 | 20130731
Length = 213
Score = 75.9 bits (185), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 40/132 (30%), Positives = 70/132 (53%), Gaps = 17/132 (12%)
Query: 73 QVVGWPPIRSYRKNSLQQKK----------TEQGDGAGMYVKVSMAGAPYLRKIDLKVYN 122
+VGWPPI+S+RK ++ + +YVKV+M G R+I+L++YN
Sbjct: 88 HLVGWPPIKSWRKKEFHDQQLPEHIRKANENQNRRSKPLYVKVNMEGVGMGRQINLRLYN 147
Query: 123 NYPELLKALENMF-KCTFGEYSEREGYNGSEHAPTYEDKDGDWMLVGDVPWNMFMSSCKR 181
+Y L +L +MF KC E + G+ + T+++K G+W L + W F+ + +R
Sbjct: 148 SYQTLKDSLISMFVKCQNFEET------GANYTLTFQNKQGEWKLTSHITWQSFIGTVRR 201
Query: 182 LRIVKGSEAKGL 193
L I++ E + +
Sbjct: 202 LAILRNGECETI 213
>Medtr1g085750.2 | auxin-responsive AUX/IAA family protein | HC |
chr1:38333347-38334717 | 20130731
Length = 157
Score = 68.2 bits (165), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 40/101 (39%), Positives = 52/101 (51%), Gaps = 13/101 (12%)
Query: 77 WPPIRSYRKNSLQQKKTEQGD----GAGMYVKVSMAGAPYLRKIDLKVYNNYPELLKALE 132
W PI QQ+ E D + +VKV M G P RK++L +N Y EL+ LE
Sbjct: 64 WQPI--------QQQGGEVNDCSDYNSAFFVKVYMEGIPIGRKLNLLAHNGYHELVNTLE 115
Query: 133 NMFKCTFGEYSEREGYNGSE-HAPTYEDKDGDWMLVGDVPW 172
MF T +E +G H TYED +GD ++VGDVPW
Sbjct: 116 QMFDTTILWGTEMDGVQSERCHVLTYEDGEGDLIMVGDVPW 156
>Medtr4g115075.1 | auxin-responsive AUX/IAA family protein | HC |
chr4:47460828-47458972 | 20130731
Length = 208
Score = 65.9 bits (159), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 35/122 (28%), Positives = 63/122 (51%), Gaps = 16/122 (13%)
Query: 74 VVGWPPIRSYRK------NSLQQKKT--EQGDGAGMYVKVSMAGAPYLRKIDLKVYNNYP 125
+VGWPP+ RK N ++ + YVKV M G RK++L +++++
Sbjct: 93 LVGWPPVNCRRKKLRCNENDVEDHVVPIDGSHNHRNYVKVKMEGVGIARKVNLGMHHSFH 152
Query: 126 ELLKALENMFKCTFGEYSEREGYNGSEHAPTYEDKDGDWMLVGDVPWNMFMSSCKRLRIV 185
L + L +MF E+ ++ ++ Y+DK+GDW+L D+ W F+ +RL+++
Sbjct: 153 TLNQTLMDMF--------EKCDHDQQQYELVYQDKEGDWLLAQDISWRSFIECAQRLKLL 204
Query: 186 KG 187
K
Sbjct: 205 KS 206
>Medtr1g109510.1 | auxin-responsive AUX/IAA family protein | HC |
chr1:49537832-49539058 | 20130731
Length = 178
Score = 58.2 bits (139), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 39/116 (33%), Positives = 59/116 (50%), Gaps = 4/116 (3%)
Query: 74 VVGWPPI---RSYRKNSLQQKKTEQGDGAGMYVKVSMAGAPYLRKIDLKVYNNYPELLKA 130
++ WP + RS +N ++ + Q + YVKV+M G RKI + + Y L
Sbjct: 54 LMDWPNMKNSRSVHENFDEEIEGVQSNERWAYVKVNMDGVSIGRKICILDHGGYSSLAIQ 113
Query: 131 LENMFKCTFGEYSEREGYNGSEHAPTYEDKDGDWMLVGDVPWNMFMSSCKRLRIVK 186
LE+MF R +GSE++ Y+D + +W VGDV W F+ KRLRI +
Sbjct: 114 LEDMFGSQ-SVSGIRLFESGSEYSLFYKDSEDNWRTVGDVLWKEFVECVKRLRIAR 168
>Medtr1g024025.1 | auxin response factor 2 | LC |
chr1:7778460-7771119 | 20130731
Length = 1265
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 35/93 (37%), Positives = 48/93 (51%), Gaps = 5/93 (5%)
Query: 102 YVKVSMAGAPYLRKIDLKVYNNYPELLKALENMFKCTFGEYSEREGYNGSEHAPTYEDKD 161
Y KV AG+ R ID+ + NY EL++A+E C FG GS Y D +
Sbjct: 756 YTKVQKAGS-VGRSIDVTTFKNYEELIRAIE----CMFGLDGLLNDTKGSGWKLVYVDYE 810
Query: 162 GDWMLVGDVPWNMFMSSCKRLRIVKGSEAKGLS 194
D +LVGD PW F+ + +RI+ SE K +S
Sbjct: 811 SDVLLVGDDPWEEFVGCVRCIRILSPSEVKEMS 843
>Medtr4g128070.1 | auxin-responsive AUX/IAA family protein | HC |
chr4:53308708-53310353 | 20130731
Length = 173
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/97 (32%), Positives = 46/97 (47%), Gaps = 7/97 (7%)
Query: 103 VKVSMAGAPYLRKIDLKVYNNYPELLKALENMF-----KCTFGEYSEREGYNGSEHAPTY 157
V V + G ++I L + +Y L KAL MF C G++ H Y
Sbjct: 70 VTVVLEGRSICQRISLHNHGSYQSLAKALRQMFVDCTDDCDAGDHHLDLSNAIPGHVIAY 129
Query: 158 EDKDGDWMLVGDVPWNMFMSSCKRLRIV--KGSEAKG 192
ED + D +L GD+ W F+ KR+RI+ KG+ KG
Sbjct: 130 EDMENDLLLAGDLTWKDFVRVAKRIRILPAKGNSRKG 166
>Medtr8g027440.1 | auxin response factor 2 | HC |
chr8:9733998-9728759 | 20130731
Length = 677
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 44/93 (47%), Gaps = 6/93 (6%)
Query: 103 VKVSMAGAPYLRKIDLKVYNNYPELLKALENMFKCTFGEYSEREGYNGSEHAPTYEDKDG 162
KV M G R +DL + + Y EL+ +E +F GE + + T+ D +
Sbjct: 561 TKVQMEGVAVGRALDLTMLSGYDELIDEVEKLFDIK-GELRSQNKWRV-----TFTDNEN 614
Query: 163 DWMLVGDVPWNMFMSSCKRLRIVKGSEAKGLSC 195
D MLVGD PW F + K++ I E K + C
Sbjct: 615 DMMLVGDDPWPEFCNMVKKIFICSNEELKKMKC 647
>Medtr4g021580.1 | auxin response factor 2 | HC |
chr4:7078271-7072794 | 20130731
Length = 667
Score = 50.1 bits (118), Expect = 2e-06, Method: Composition-based stats.
Identities = 29/90 (32%), Positives = 42/90 (46%), Gaps = 6/90 (6%)
Query: 104 KVSMAGAPYLRKIDLKVYNNYPELLKALENMFKCTFGEYSEREGYNGSEHAPTYEDKDGD 163
KV M G R +DL N Y +L+ LE +F G+ R + + D +GD
Sbjct: 559 KVQMQGVAVGRAVDLATLNGYDQLIGELEELFDIK-GQLQHRNTWE-----IVFTDDEGD 612
Query: 164 WMLVGDVPWNMFMSSCKRLRIVKGSEAKGL 193
MLVGD PW F + +R+ I + K +
Sbjct: 613 MMLVGDDPWPEFCNMVRRIFICSSQDVKKM 642
>Medtr2g005240.1 | auxin response factor 2 | HC | chr2:92911-103331
| 20130731
Length = 671
Score = 47.8 bits (112), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 35/111 (31%), Positives = 50/111 (45%), Gaps = 7/111 (6%)
Query: 85 KNSLQQKKTEQGDGAGMYVKVSMAGAPYLRKIDLKVYNNYPELLKALENMFKCTFGEYSE 144
K+ L+ + Q KV M G R +DL ++ Y +LL+ LE MF E
Sbjct: 532 KSCLRSPQESQSRQIRSCTKVHMQGMAVGRAVDLTRFDGYEDLLRKLEEMFDI------E 585
Query: 145 REGYNGSEH-APTYEDKDGDWMLVGDVPWNMFMSSCKRLRIVKGSEAKGLS 194
E ++ Y D + D M+VGD PW F S +++ I E K LS
Sbjct: 586 GELCGATKKWLVVYTDNEDDMMMVGDDPWLEFCSVVRKMFIYTPEEVKKLS 636
>Medtr7g062540.1 | auxin response factor 2 | HC |
chr7:22756278-22761697 | 20130731
Length = 680
Score = 47.4 bits (111), Expect = 9e-06, Method: Composition-based stats.
Identities = 32/109 (29%), Positives = 47/109 (43%), Gaps = 10/109 (9%)
Query: 86 NSLQQKKTEQGDGAGMYVKVSMAGAPYLRKIDLKVYNNYPELLKALENMFKCTFGEYSER 145
N Q K+T KV M G R +DL + Y +L+ LE +F G+ R
Sbjct: 560 NETQSKQTNSRS----CTKVQMQGVAVGRAVDLTALDGYDQLIDELEKLFDIK-GQIQPR 614
Query: 146 EGYNGSEHAPTYEDKDGDWMLVGDVPWNMFMSSCKRLRIVKGSEAKGLS 194
+ + D +GD MLVGD PW F + +R+ I + +S
Sbjct: 615 NKWE-----IVFTDDEGDMMLVGDDPWPEFCNMVRRIFICSSQDVHKMS 658