Miyakogusa Predicted Gene

Lj1g3v4450430.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v4450430.1 Non Characterized Hit- tr|I3S0A7|I3S0A7_LOTJA
Uncharacterized protein OS=Lotus japonicus PE=2 SV=1,99.68,0,trpA:
tryptophan synthase, alpha subunit,Tryptophan synthase, alpha chain;
Ribulose-phoshate binding,CUFF.32402.1
         (311 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr7g102980.1 | indole-3-glycerol phosphate lyase IGL1 | HC | ...   512   e-145
Medtr7g096080.1 | indole-3-glycerol phosphate lyase IGL1 | HC | ...   497   e-141
Medtr7g102980.2 | indole-3-glycerol phosphate lyase IGL1 | HC | ...   438   e-123
Medtr7g102980.3 | indole-3-glycerol phosphate lyase IGL1 | HC | ...   400   e-112

>Medtr7g102980.1 | indole-3-glycerol phosphate lyase IGL1 | HC |
           chr7:41386131-41391764 | 20130731
          Length = 312

 Score =  512 bits (1319), Expect = e-145,   Method: Compositional matrix adjust.
 Identities = 261/311 (83%), Positives = 286/311 (91%), Gaps = 1/311 (0%)

Query: 1   MAIALKSSCFFQVKKPEAGFPVYFSSKK-AIISVKRNTPVAAIRTMETVGLSETFSRLKK 59
           MAIA KSSCF Q  KP  GF + FSS+K  IISVKR T VAAI+TMETVG+SETF+RLKK
Sbjct: 1   MAIAFKSSCFLQFNKPNTGFGLSFSSRKPVIISVKRYTSVAAIKTMETVGISETFNRLKK 60

Query: 60  QGKVAFIPYITAGDPDLSTTAEALKVLDSCGSDIIELGVPYSDPLADGPVIQAAATRSLA 119
           QGKVA IP+ITAGDPDLSTTAEALKVLDSCGSDIIELGVPYSDPLADGPVIQAAATR+LA
Sbjct: 61  QGKVALIPFITAGDPDLSTTAEALKVLDSCGSDIIELGVPYSDPLADGPVIQAAATRALA 120

Query: 120 RGTNFNAIISMLKEVTPQLSCPVALFSYYNPILKRGTDKFMSTIRDSGVHGLVVPDVPLE 179
           RG+NF++IISML EV PQ+S P+ALF+YYNPILKRGT KFMS +RD+GVHGLVVPDVPLE
Sbjct: 121 RGSNFDSIISMLNEVIPQISTPIALFTYYNPILKRGTGKFMSIVRDTGVHGLVVPDVPLE 180

Query: 180 ETEILRTEAKKNGIELVLLTTPTTPIDRMKAIVDAAEGFVYLVSSVGVTGARASVSDKVQ 239
           ET+ LR EAKK+GIELVLLTTPTTP DRMKAIVDAAEGFVYLVSSVGVTGARASVS KVQ
Sbjct: 181 ETKTLREEAKKHGIELVLLTTPTTPTDRMKAIVDAAEGFVYLVSSVGVTGARASVSGKVQ 240

Query: 240 ALLQEIKEATSKPVAVGFGISKPEHVEQVAGWGADGVIVGSAMVKILGDAKSPQEGLKEL 299
           ALLQ+IKEAT+KPVAVGFGIS PEHV+Q+ GWGADGVIVGSAMV++LG+AKSP+EGLKEL
Sbjct: 241 ALLQDIKEATTKPVAVGFGISTPEHVKQIVGWGADGVIVGSAMVRLLGEAKSPEEGLKEL 300

Query: 300 ENFTRSLKSAL 310
           E FTRSLKSAL
Sbjct: 301 EKFTRSLKSAL 311


>Medtr7g096080.1 | indole-3-glycerol phosphate lyase IGL1 | HC |
           chr7:38524065-38521103 | 20130731
          Length = 314

 Score =  497 bits (1280), Expect = e-141,   Method: Compositional matrix adjust.
 Identities = 256/313 (81%), Positives = 283/313 (90%), Gaps = 3/313 (0%)

Query: 1   MAIALKSSCFFQVKKPEAGFPVYFSSKKA-IISVKRNTPVAA--IRTMETVGLSETFSRL 57
           MAIALKS C  Q+KKPE GF V  SSK A IIS+KR T V+A   R++E + +SETF+ L
Sbjct: 1   MAIALKSHCLLQLKKPETGFRVGVSSKNATIISIKRYTSVSASATRSIEAISISETFNNL 60

Query: 58  KKQGKVAFIPYITAGDPDLSTTAEALKVLDSCGSDIIELGVPYSDPLADGPVIQAAATRS 117
           KKQGKVA IPYITAGDPDLSTTAEALKVLDSCGSDIIELGVPYSDPLADGPVIQAA+TRS
Sbjct: 61  KKQGKVALIPYITAGDPDLSTTAEALKVLDSCGSDIIELGVPYSDPLADGPVIQAASTRS 120

Query: 118 LARGTNFNAIISMLKEVTPQLSCPVALFSYYNPILKRGTDKFMSTIRDSGVHGLVVPDVP 177
           LARGT+F++II MLKEV P+LS PVALF+YYNPILKRGT++FMS IRD+GVHGLVVPDVP
Sbjct: 121 LARGTDFDSIIYMLKEVVPELSTPVALFTYYNPILKRGTERFMSIIRDTGVHGLVVPDVP 180

Query: 178 LEETEILRTEAKKNGIELVLLTTPTTPIDRMKAIVDAAEGFVYLVSSVGVTGARASVSDK 237
           LEE+E LRTEAKKNGIELVLLTTPTTP +RMK IVD AEGFVYLVSS+GVTG RASVSDK
Sbjct: 181 LEESEFLRTEAKKNGIELVLLTTPTTPTNRMKDIVDGAEGFVYLVSSLGVTGTRASVSDK 240

Query: 238 VQALLQEIKEATSKPVAVGFGISKPEHVEQVAGWGADGVIVGSAMVKILGDAKSPQEGLK 297
           VQALL+EIKEAT+KPVAVGFGIS  E V+QVAGWGADGVIVGSAMV++LG+AKSPQEGLK
Sbjct: 241 VQALLREIKEATTKPVAVGFGISTAEQVKQVAGWGADGVIVGSAMVRLLGEAKSPQEGLK 300

Query: 298 ELENFTRSLKSAL 310
           ELENFTRSL+SAL
Sbjct: 301 ELENFTRSLRSAL 313


>Medtr7g102980.2 | indole-3-glycerol phosphate lyase IGL1 | HC |
           chr7:41386163-41391764 | 20130731
          Length = 275

 Score =  438 bits (1126), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 227/275 (82%), Positives = 249/275 (90%), Gaps = 2/275 (0%)

Query: 1   MAIALKSSCFFQVKKPEAGFPVYFSSKK-AIISVKRNTPVAAIRTMETVGLSETFSRLKK 59
           MAIA KSSCF Q  KP  GF + FSS+K  IISVKR T VAAI+TMETVG+SETF+RLKK
Sbjct: 1   MAIAFKSSCFLQFNKPNTGFGLSFSSRKPVIISVKRYTSVAAIKTMETVGISETFNRLKK 60

Query: 60  QGKVAFIPYITAGDPDLSTTAEALKVLDSCGSDIIELGVPYSDPLADGPVIQAAATRSLA 119
           QGKVA IP+ITAGDPDLSTTAEALKVLDSCGSDIIELGVPYSDPLADGPVIQAAATR+LA
Sbjct: 61  QGKVALIPFITAGDPDLSTTAEALKVLDSCGSDIIELGVPYSDPLADGPVIQAAATRALA 120

Query: 120 RGTNFNAIISMLKEVTPQLSCPVALFSYYNPILKRGTDKFMSTIRDSGVHGLVVPDVPLE 179
           RG+NF++IISML EV PQ+S P+ALF+YYNPILKRGT KFMS +RD+GVHGLVVPDVPLE
Sbjct: 121 RGSNFDSIISMLNEVIPQISTPIALFTYYNPILKRGTGKFMSIVRDTGVHGLVVPDVPLE 180

Query: 180 ETEILRTEAKKNGIELVLLTTPTTPIDRMKAIVDAAEGFVYLVSSVGVTGARASVSDKVQ 239
           ET+ LR EAKK+GIELVLLTTPTTP DRMKAIVDAAEGFVYLVSSVGVTGARASVS KVQ
Sbjct: 181 ETKTLREEAKKHGIELVLLTTPTTPTDRMKAIVDAAEGFVYLVSSVGVTGARASVSGKVQ 240

Query: 240 ALLQEIKEATSKPVAVGFGISKPEHVEQV-AGWGA 273
           ALLQ+IKEAT+KPVAVGFGIS PEHV+Q  +G G+
Sbjct: 241 ALLQDIKEATTKPVAVGFGISTPEHVKQANSGMGS 275


>Medtr7g102980.3 | indole-3-glycerol phosphate lyase IGL1 | HC |
           chr7:41386163-41391764 | 20130731
          Length = 256

 Score =  400 bits (1029), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 208/248 (83%), Positives = 226/248 (91%), Gaps = 1/248 (0%)

Query: 1   MAIALKSSCFFQVKKPEAGFPVYFSSKK-AIISVKRNTPVAAIRTMETVGLSETFSRLKK 59
           MAIA KSSCF Q  KP  GF + FSS+K  IISVKR T VAAI+TMETVG+SETF+RLKK
Sbjct: 1   MAIAFKSSCFLQFNKPNTGFGLSFSSRKPVIISVKRYTSVAAIKTMETVGISETFNRLKK 60

Query: 60  QGKVAFIPYITAGDPDLSTTAEALKVLDSCGSDIIELGVPYSDPLADGPVIQAAATRSLA 119
           QGKVA IP+ITAGDPDLSTTAEALKVLDSCGSDIIELGVPYSDPLADGPVIQAAATR+LA
Sbjct: 61  QGKVALIPFITAGDPDLSTTAEALKVLDSCGSDIIELGVPYSDPLADGPVIQAAATRALA 120

Query: 120 RGTNFNAIISMLKEVTPQLSCPVALFSYYNPILKRGTDKFMSTIRDSGVHGLVVPDVPLE 179
           RG+NF++IISML EV PQ+S P+ALF+YYNPILKRGT KFMS +RD+GVHGLVVPDVPLE
Sbjct: 121 RGSNFDSIISMLNEVIPQISTPIALFTYYNPILKRGTGKFMSIVRDTGVHGLVVPDVPLE 180

Query: 180 ETEILRTEAKKNGIELVLLTTPTTPIDRMKAIVDAAEGFVYLVSSVGVTGARASVSDKVQ 239
           ET+ LR EAKK+GIELVLLTTPTTP DRMKAIVDAAEGFVYLVSSVGVTGARASVS KVQ
Sbjct: 181 ETKTLREEAKKHGIELVLLTTPTTPTDRMKAIVDAAEGFVYLVSSVGVTGARASVSGKVQ 240

Query: 240 ALLQEIKE 247
           ALLQ+IKE
Sbjct: 241 ALLQDIKE 248