Miyakogusa Predicted Gene

Lj1g3v4450310.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v4450310.1 tr|I0YVK3|I0YVK3_9CHLO Vacuolar ATP synthase
(Fragment) OS=Coccomyxa subellipsoidea C-169 PE=4 SV=1,71.43,4e-19,no
description,NULL; ATP-synt_F,ATPase, V1/A1 complex, subunit F;
SUBFAMILY NOT NAMED,NULL; VACUOLAR,CUFF.32414.1
         (77 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr4g023480.1 | metal-dependent phosphohydrolase | HC | chr4:7...    49   1e-06

>Medtr4g023480.1 | metal-dependent phosphohydrolase | HC |
          chr4:7937071-7933563 | 20130731
          Length = 286

 Score = 48.5 bits (114), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 22/50 (44%), Positives = 34/50 (68%)

Query: 21 EDTVVGFLLAGVGNVDLRRKTNYLIVDSKTTVKQIEDAFKEFTTREDIAI 70
          +DT V FLLAGVGN+D+ RKTN  +V+S+  +   ED+ + + +R   A+
Sbjct: 6  KDTKVAFLLAGVGNIDIHRKTNCFVVNSRCKLLFCEDSRRSYISRARCAV 55