Miyakogusa Predicted Gene

Lj1g3v4450290.2

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v4450290.2 tr|B9GS80|B9GS80_POPTR Predicted protein
OS=Populus trichocarpa GN=POPTRDRAFT_816116 PE=4
SV=1,65.15,6e-18,Interferon-induced guanylate-binding protein 1
(GBP1), C-terminal domain,Guanylate-binding protein, ,CUFF.32397.2
         (234 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr7g096020.1 | guanylate-binding family protein | HC | chr7:3...   410   e-115
Medtr1g070940.1 | guanylate-binding family protein | HC | chr1:3...   388   e-108
Medtr4g088220.1 | guanylate-binding family protein | HC | chr4:3...    56   2e-08

>Medtr7g096020.1 | guanylate-binding family protein | HC |
           chr7:38488910-38496293 | 20130731
          Length = 604

 Score =  410 bits (1055), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 196/232 (84%), Positives = 217/232 (93%)

Query: 3   WNRVKGQDVAFEPAKLLWLIQRDFLQGKSVQEMVDEALRRVPNSHGDKNIDMVNQIRDSL 62
           + RVKGQDVAFEPAKLLWLIQRDFLQGKSVQ+MVDEALR+VPN   D+NIDM+NQIRDSL
Sbjct: 227 YGRVKGQDVAFEPAKLLWLIQRDFLQGKSVQQMVDEALRQVPNKDRDRNIDMINQIRDSL 286

Query: 63  AIMGDNSTAFSLPQPHLQRTKLCDMKDSELDPSYVKKRDKLKELVASLIRPKIVQGKSLN 122
           AIMGDNSTAFSLPQPHLQRTKLCD+KD ELDPSYVKKR+KLKELV+S+IRPKIVQGKSLN
Sbjct: 287 AIMGDNSTAFSLPQPHLQRTKLCDLKDGELDPSYVKKREKLKELVSSIIRPKIVQGKSLN 346

Query: 123 GKEFVSFLEQILEALNKGEIPSTGSLVEIFNKNILERCLKLYSERMATVDLPLSEESLQE 182
           GKEFVSFL+QILEALNKGEIPSTGSLVEIFNK+ILERCLKLYSE+MAT+ LPL E  LQ 
Sbjct: 347 GKEFVSFLKQILEALNKGEIPSTGSLVEIFNKDILERCLKLYSEKMATLALPLPEGYLQA 406

Query: 183 SHDRSRGEAMEMFDQQHFGRHHAKKSIMQLEEEINKVYKNALFQNEYKSSKL 234
           SHD +RG+AM+ FDQQHFGRHHAKKS+ QL+EEI+KV+KN + QNEYKSSKL
Sbjct: 407 SHDMARGDAMQAFDQQHFGRHHAKKSVTQLDEEIDKVFKNVILQNEYKSSKL 458


>Medtr1g070940.1 | guanylate-binding family protein | HC |
           chr1:31412653-31405961 | 20130731
          Length = 596

 Score =  388 bits (997), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 183/232 (78%), Positives = 210/232 (90%)

Query: 3   WNRVKGQDVAFEPAKLLWLIQRDFLQGKSVQEMVDEALRRVPNSHGDKNIDMVNQIRDSL 62
           + RVKG DVAFEPAKLLWLIQRDFLQGKSVQEMV+EAL+RVPN++GDKNID+VNQIRDSL
Sbjct: 174 YGRVKGDDVAFEPAKLLWLIQRDFLQGKSVQEMVNEALQRVPNTNGDKNIDLVNQIRDSL 233

Query: 63  AIMGDNSTAFSLPQPHLQRTKLCDMKDSELDPSYVKKRDKLKELVASLIRPKIVQGKSLN 122
           A+MG+N+TAFSLPQPH+QRTKLCDM D ELD  YV +R++LKELV S+I PKIVQGK+LN
Sbjct: 234 AMMGNNNTAFSLPQPHIQRTKLCDMNDVELDQLYVTRREQLKELVTSIISPKIVQGKTLN 293

Query: 123 GKEFVSFLEQILEALNKGEIPSTGSLVEIFNKNILERCLKLYSERMATVDLPLSEESLQE 182
           GKEFVSFLEQIL+ALNKGEIPS+GSLVE+FNK I+ERCLKLY E+MAT+DLPLSEE LQ 
Sbjct: 294 GKEFVSFLEQILDALNKGEIPSSGSLVEVFNKGIIERCLKLYGEKMATLDLPLSEEYLQG 353

Query: 183 SHDRSRGEAMEMFDQQHFGRHHAKKSIMQLEEEINKVYKNALFQNEYKSSKL 234
            H+RSR E M++FDQQHFG HHAKKS MQL EEI K+YKN + QNEY+SSKL
Sbjct: 354 VHNRSRNEVMKVFDQQHFGHHHAKKSTMQLNEEIKKMYKNVILQNEYQSSKL 405


>Medtr4g088220.1 | guanylate-binding family protein | HC |
           chr4:34807836-34816151 | 20130731
          Length = 1060

 Score = 56.2 bits (134), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 59/227 (25%), Positives = 102/227 (44%), Gaps = 24/227 (10%)

Query: 13  FEPAKLLWLIQRDFL-------QGKSVQEMVDEALRRVPNSHGDKNIDMVNQIRDSLAIM 65
           F P   +WL+ RDF        +  + ++ ++ ALR V  +  D  +   N+IR+S+  +
Sbjct: 201 FSPI-FVWLL-RDFYLDLTEDNRKITPRDYLELALRSVQGNRND--VAAKNEIRESIRAL 256

Query: 66  GDNSTAFSLPQP-----HLQRTKLCDMKDSELDPSYVKKRDKLKELVASLIRPKIVQGKS 120
             +   F+L +P      LQR  L  +   +L P + +    L + V    RPK V    
Sbjct: 257 FPDRECFTLVRPLNNENDLQR--LDQISSDKLRPEFRRDIQALIKFVFERTRPKQVGATM 314

Query: 121 LNGKEFVSFLEQILEALNKGEIPSTGSLVEIFNKNILERCLKLYSE-RMATVDL--PLSE 177
           + G   +   E  L+ALN G +P+  S  +   +    R     +E  MA+ D   P  E
Sbjct: 315 MTGPVLIGITESYLDALNHGAVPTISSSWQSVEEAECRRAYDFATEVYMASFDRSKPPEE 374

Query: 178 ESLQESHDRSRGEAMEMFDQQHFGRHHAKKSIMQLEEEINKVYKNAL 224
            +L E+H+++  ++M  F+    G   A+K   + E ++ K  K A 
Sbjct: 375 VALMEAHEQAVQKSMSAFNASAVGVGAARK---KYEGQLQKFLKKAF 418