Miyakogusa Predicted Gene

Lj1g3v4449220.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v4449220.1 Non Characterized Hit- tr|I1JF58|I1JF58_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.13613
PE,65.15,0,DUF4033,Domain of unknown function DUF4033,CUFF.32393.1
         (264 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr1g471050.1 | beta-carotene isomerase D27 | HC | chr1:314561...   360   e-100
Medtr7g095920.1 | beta-carotene isomerase D27 | LC | chr7:384656...   338   3e-93
Medtr3g080840.1 | D27 family protein, putative | HC | chr3:36588...   165   4e-41
Medtr1g086840.1 | D27 family protein, putative | HC | chr1:38882...   134   1e-31
Medtr1g086840.2 | D27 family protein, putative | HC | chr1:38882...    87   2e-17

>Medtr1g471050.1 | beta-carotene isomerase D27 | HC |
           chr1:31456119-31465321 | 20130731
          Length = 252

 Score =  360 bits (925), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 170/262 (64%), Positives = 204/262 (77%), Gaps = 12/262 (4%)

Query: 1   METSVVRQNMISISTPTSPLWKLIKHKPQHRPCVVAVLRNPLSDIAGAARKTIGESDSPM 60
           M++ ++  NM    TPT   WK ++ KP+H   VV VL  P  DI+          ++  
Sbjct: 1   MDSKMIAHNMSL--TPTLAQWKKLRLKPKHT-FVVGVLARPTDDIS---------EETLR 48

Query: 61  KTNIYKDNWFDRLAINHLSKSVQEATGVINHKSGYEGLVEAANVAKHKFSPVQQQEVVIQ 120
           KTN+YKDNWFD+LAINHLSKSVQ ATG+ N+KSG++ LVEAA VA  KF+  QQQ +++ 
Sbjct: 49  KTNVYKDNWFDKLAINHLSKSVQAATGISNNKSGFDSLVEAATVASQKFNTTQQQGIILD 108

Query: 121 ALDKAFPKPILDLIKTLLPPSKFAREYYAVFTTLFFAWLVGPSEVRESEVNGRREKNVVY 180
           ALD+AFPKPIL +I+ ++PPSK AREY+AVFTT+FFAWL+GPSEVRESE+NGRREKN+V+
Sbjct: 109 ALDRAFPKPILSVIRRVMPPSKLAREYFAVFTTIFFAWLLGPSEVRESEINGRREKNIVH 168

Query: 181 VKKCRFLEATNCVGMCTNICKMPSQSFIKDSLGMSFNMVPNFDDMSCEMIFGQDPPALAD 240
           +KKCRFLE TNCVGMC N+CKMPSQ FIKDS GM  NMVPNFDDMSCEMIFGQ+PPA  D
Sbjct: 169 IKKCRFLEETNCVGMCINLCKMPSQLFIKDSFGMPVNMVPNFDDMSCEMIFGQEPPASTD 228

Query: 241 DPALKQPCYKLCKAYKQHGPSC 262
           DPALKQPCYKLCKA K H   C
Sbjct: 229 DPALKQPCYKLCKAKKNHATQC 250


>Medtr7g095920.1 | beta-carotene isomerase D27 | LC |
           chr7:38465640-38462597 | 20130731
          Length = 248

 Score =  338 bits (867), Expect = 3e-93,   Method: Compositional matrix adjust.
 Identities = 165/263 (62%), Positives = 197/263 (74%), Gaps = 17/263 (6%)

Query: 1   METSVVRQNMISISTPTSPLWKLIKHKPQHRPCVVAVLRNPLS-DIAGAARKTIGESDSP 59
           MET+V RQN IS  T T+  + LIKH P     +V+VLR P + DI     K++      
Sbjct: 1   METNVFRQNRISTLTSTTH-YNLIKHPPS----IVSVLRKPSNHDITEETAKSV------ 49

Query: 60  MKTNIYKDNWFDRLAINHLSKSVQEATGVINHKSGYEGLVEAANVAKHKFSPVQQQEVVI 119
                YKDNWFD +AINHLSK+VQ ATG+ N+KSGYE LVEAA +AK KF+ +QQQEV I
Sbjct: 50  -----YKDNWFDLIAINHLSKTVQAATGLRNNKSGYESLVEAATMAKQKFNAIQQQEVTI 104

Query: 120 QALDKAFPKPILDLIKTLLPPSKFAREYYAVFTTLFFAWLVGPSEVRESEVNGRREKNVV 179
           QALDK FP+ +  LIK    P KF RE++A+ TT+FF WL+GPSEVRESE+NGR E+N V
Sbjct: 105 QALDKLFPQFVFALIKKQPLPPKFTREFFALITTMFFTWLLGPSEVRESEINGRIERNAV 164

Query: 180 YVKKCRFLEATNCVGMCTNICKMPSQSFIKDSLGMSFNMVPNFDDMSCEMIFGQDPPALA 239
           Y+KKCRFLE TNCVGMC N+CK+P+QSFIK++LGM  NMVPNFDDMSCEMIFGQDPPA  
Sbjct: 165 YIKKCRFLEETNCVGMCVNMCKLPTQSFIKNTLGMPVNMVPNFDDMSCEMIFGQDPPASI 224

Query: 240 DDPALKQPCYKLCKAYKQHGPSC 262
           DDP+LKQPCYK CK Y+ HG  C
Sbjct: 225 DDPSLKQPCYKQCKVYRSHGADC 247


>Medtr3g080840.1 | D27 family protein, putative | HC |
           chr3:36588592-36585417 | 20130731
          Length = 266

 Score =  165 bits (418), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 87/243 (35%), Positives = 133/243 (54%), Gaps = 21/243 (8%)

Query: 22  KLIKHKPQHRPCVVAVLRNPLSDIAGAARKTIGESDSPMKTNIYKDNWFDRLAINHLSKS 81
           +LI   PQ+ P      R   + I     +  GE     +   Y D+ F+++ +   ++ 
Sbjct: 11  QLIITPPQYAP------RASGATIRCGIAEPSGEPAPLGQKTRYNDSIFEKVFMTLFARK 64

Query: 82  VQE-ATGVINH--------------KSGYEGLVEAANVAKHKFSPVQQQEVVIQALDKAF 126
           ++  A  VI +              +  YE  V+ +     + S +QQQ+VV + L    
Sbjct: 65  MEPFAEPVIGNAKKKKEKKGLLDVWEYDYESFVDVSKRVMLRRSRLQQQQVVREVLLSML 124

Query: 127 PKPILDLIKTLLPPSKFAREYYAVFTTLFFAWLVGPSEVRESEVNGRREKNVVYVKKCRF 186
           P       + L PP+++A E+ A  T  FF WLVGPSEV E E+NG ++K+ V++KKCR+
Sbjct: 125 PPGAPAQFRKLFPPTRWAAEFNAALTVPFFHWLVGPSEVIEVEINGVKQKSGVHIKKCRY 184

Query: 187 LEATNCVGMCTNICKMPSQSFIKDSLGMSFNMVPNFDDMSCEMIFGQDPPALADDPALKQ 246
           LE + CVG C N+CK+P+Q F  +  G+   M+PNF+DMSC+M++GQ PP+  DDP  KQ
Sbjct: 185 LENSGCVGQCVNMCKIPTQDFFTNEFGLPLTMIPNFEDMSCDMVYGQTPPSFEDDPVSKQ 244

Query: 247 PCY 249
           PCY
Sbjct: 245 PCY 247


>Medtr1g086840.1 | D27 family protein, putative | HC |
           chr1:38882140-38884971 | 20130731
          Length = 260

 Score =  134 bits (337), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 78/216 (36%), Positives = 114/216 (52%), Gaps = 7/216 (3%)

Query: 42  LSDIAGAARKTIGESDSPMKTNIYKDNWFDRLAINHLSKSVQEATGVINHKSGYEGLVEA 101
           +S  + +  KT+G + +P     YK    D L +N     + +  G  + K GY+GL+E 
Sbjct: 26  VSASSSSGPKTVGVAAAPKSE--YKPGVIDDLFLNLFRTKLVQEVGWESKKPGYDGLIEV 83

Query: 102 ANVAKHKFSPVQQQ-EVVIQALDKAFPKPILDLIKTLLPP---SKFAREYYAVFTTLFFA 157
           AN    K +      E  ++ L   FP  +L+L K L+ P    K A    A  T L   
Sbjct: 84  ANRLMMKGTTNSDTIEATVRILRSLFPPFLLELYKMLIAPIGGGKVAAIMVARVTALTCQ 143

Query: 158 WLVGPSEVRESEV-NGRREKNVVYVKKCRFLEATNCVGMCTNICKMPSQSFIKDSLGMSF 216
           WL+GP +V   E+ NG    + V+V++C++LE + CVG+C N CK P+Q+F KD +G+  
Sbjct: 144 WLMGPCKVNSVELPNGTSWNSGVHVERCKYLEESKCVGICLNTCKFPTQTFFKDHMGVPL 203

Query: 217 NMVPNFDDMSCEMIFGQDPPALADDPALKQPCYKLC 252
            M PNF D SC+  FG  PP   DD  LK+PC + C
Sbjct: 204 LMKPNFADYSCQFKFGVLPPLPEDDTVLKEPCLEAC 239


>Medtr1g086840.2 | D27 family protein, putative | HC |
           chr1:38882140-38884357 | 20130731
          Length = 222

 Score = 87.0 bits (214), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 55/160 (34%), Positives = 82/160 (51%), Gaps = 7/160 (4%)

Query: 51  KTIGESDSPMKTNIYKDNWFDRLAINHLSKSVQEATGVINHKSGYEGLVEAANVAKHKFS 110
           KT+G + +P     YK    D L +N     + +  G  + K GY+GL+E AN    K +
Sbjct: 35  KTVGVAAAPKSE--YKPGVIDDLFLNLFRTKLVQEVGWESKKPGYDGLIEVANRLMMKGT 92

Query: 111 PVQQQ-EVVIQALDKAFPKPILDLIKTLLPP---SKFAREYYAVFTTLFFAWLVGPSEVR 166
                 E  ++ L   FP  +L+L K L+ P    K A    A  T L   WL+GP +V 
Sbjct: 93  TNSDTIEATVRILRSLFPPFLLELYKMLIAPIGGGKVAAIMVARVTALTCQWLMGPCKVN 152

Query: 167 ESEV-NGRREKNVVYVKKCRFLEATNCVGMCTNICKMPSQ 205
             E+ NG    + V+V++C++LE + CVG+C N CK P+Q
Sbjct: 153 SVELPNGTSWNSGVHVERCKYLEESKCVGICLNTCKFPTQ 192