Miyakogusa Predicted Gene

Lj1g3v4447020.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v4447020.1 Non Characterized Hit- tr|D7TYT2|D7TYT2_VITVI
Putative uncharacterized protein OS=Vitis vinifera GN=,50.55,5e-19,
,CUFF.32444.1
         (91 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr8g099900.1 | tRNA nucleotidyltransferase/poly(A) polymerase...   125   1e-29
Medtr8g099900.3 | tRNA nucleotidyltransferase/poly(A) polymerase...   124   2e-29
Medtr8g099900.2 | tRNA nucleotidyltransferase/poly(A) polymerase...   124   2e-29
Medtr3g498785.2 | tRNA nucleotidyltransferase/poly(A) polymerase...   118   2e-27
Medtr3g498785.1 | tRNA nucleotidyltransferase/poly(A) polymerase...   117   3e-27

>Medtr8g099900.1 | tRNA nucleotidyltransferase/poly(A) polymerase |
           HC | chr8:40297677-40291464 | 20130731
          Length = 516

 Score =  125 bits (313), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 58/86 (67%), Positives = 68/86 (79%)

Query: 1   MTTRHMVSQAMADYPQAPHPDMVFISLGMYLKAISIFYCLRARAGRNFLSKQVIKTDYES 60
           MT+RH V++AM DYPQAPH DMVFI LGMYLKA+SIF CL+  + + FLSK+  K DYES
Sbjct: 428 MTSRHSVARAMVDYPQAPHSDMVFIPLGMYLKALSIFDCLKVSSCKKFLSKKSRKIDYES 487

Query: 61  LAHGDLQEVWHMLAMVVFDIVYPLHL 86
           LA GDL E+ H+ A VVFD VYPLHL
Sbjct: 488 LARGDLPEIRHLFARVVFDTVYPLHL 513


>Medtr8g099900.3 | tRNA nucleotidyltransferase/poly(A) polymerase |
           HC | chr8:40295437-40291464 | 20130731
          Length = 323

 Score =  124 bits (311), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 58/86 (67%), Positives = 68/86 (79%)

Query: 1   MTTRHMVSQAMADYPQAPHPDMVFISLGMYLKAISIFYCLRARAGRNFLSKQVIKTDYES 60
           MT+RH V++AM DYPQAPH DMVFI LGMYLKA+SIF CL+  + + FLSK+  K DYES
Sbjct: 235 MTSRHSVARAMVDYPQAPHSDMVFIPLGMYLKALSIFDCLKVSSCKKFLSKKSRKIDYES 294

Query: 61  LAHGDLQEVWHMLAMVVFDIVYPLHL 86
           LA GDL E+ H+ A VVFD VYPLHL
Sbjct: 295 LARGDLPEIRHLFARVVFDTVYPLHL 320


>Medtr8g099900.2 | tRNA nucleotidyltransferase/poly(A) polymerase |
           HC | chr8:40297676-40291578 | 20130731
          Length = 457

 Score =  124 bits (311), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 58/86 (67%), Positives = 68/86 (79%)

Query: 1   MTTRHMVSQAMADYPQAPHPDMVFISLGMYLKAISIFYCLRARAGRNFLSKQVIKTDYES 60
           MT+RH V++AM DYPQAPH DMVFI LGMYLKA+SIF CL+  + + FLSK+  K DYES
Sbjct: 369 MTSRHSVARAMVDYPQAPHSDMVFIPLGMYLKALSIFDCLKVSSCKKFLSKKSRKIDYES 428

Query: 61  LAHGDLQEVWHMLAMVVFDIVYPLHL 86
           LA GDL E+ H+ A VVFD VYPLHL
Sbjct: 429 LARGDLPEIRHLFARVVFDTVYPLHL 454


>Medtr3g498785.2 | tRNA nucleotidyltransferase/poly(A) polymerase |
           HC | chr3:45158441-45152448 | 20130731
          Length = 530

 Score =  118 bits (295), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 53/91 (58%), Positives = 69/91 (75%)

Query: 1   MTTRHMVSQAMADYPQAPHPDMVFISLGMYLKAISIFYCLRARAGRNFLSKQVIKTDYES 60
           MT  H VSQAMADYPQAPH D+VFI L +Y+K  +IF C++  A +  LSKQ +K DYES
Sbjct: 430 MTDEHFVSQAMADYPQAPHSDLVFIPLELYVKVFNIFECVKRSAVKRSLSKQGMKIDYES 489

Query: 61  LAHGDLQEVWHMLAMVVFDIVYPLHLDRDQS 91
           LA+GD+QE+ H+ A +VFD V+PLH  +DQ+
Sbjct: 490 LANGDIQEIRHVFARIVFDTVFPLHQYQDQA 520


>Medtr3g498785.1 | tRNA nucleotidyltransferase/poly(A) polymerase |
           HC | chr3:45158396-45153028 | 20130731
          Length = 552

 Score =  117 bits (292), Expect = 3e-27,   Method: Composition-based stats.
 Identities = 53/91 (58%), Positives = 69/91 (75%)

Query: 1   MTTRHMVSQAMADYPQAPHPDMVFISLGMYLKAISIFYCLRARAGRNFLSKQVIKTDYES 60
           MT  H VSQAMADYPQAPH D+VFI L +Y+K  +IF C++  A +  LSKQ +K DYES
Sbjct: 452 MTDEHFVSQAMADYPQAPHSDLVFIPLELYVKVFNIFECVKRSAVKRSLSKQGMKIDYES 511

Query: 61  LAHGDLQEVWHMLAMVVFDIVYPLHLDRDQS 91
           LA+GD+QE+ H+ A +VFD V+PLH  +DQ+
Sbjct: 512 LANGDIQEIRHVFARIVFDTVFPLHQYQDQA 542