Miyakogusa Predicted Gene

Lj1g3v4446870.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v4446870.1 Non Characterized Hit- tr|I1L6M7|I1L6M7_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.55824
PE,65.45,0,BIFUNCTIONAL PROTEIN FOLD,NULL; TETRAHYDROFOLATE
DEHYDROGENASE/CYCLOHYDROLASE FAMILY MEMBER,NULL; NA,gene.g36494.t1.1
         (301 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr7g076680.3 | methylenetetrahydrofolate dehydrogenase | HC |...   385   e-107
Medtr7g076680.1 | methylenetetrahydrofolate dehydrogenase | HC |...   385   e-107
Medtr7g076680.2 | methylenetetrahydrofolate dehydrogenase | HC |...   384   e-107
Medtr7g108580.1 | cytoplasmic C-1-tetrahydrofolate synthase | HC...   288   5e-78
Medtr1g030450.1 | methylenetetrahydrofolate dehydrogenase | HC |...   282   3e-76
Medtr3g007490.1 | methylenetetrahydrofolate dehydrogenase | HC |...   264   9e-71
Medtr3g007580.1 | methylenetetrahydrofolate dehydrogenase | HC |...    81   1e-15

>Medtr7g076680.3 | methylenetetrahydrofolate dehydrogenase | HC |
           chr7:28900731-28896287 | 20130731
          Length = 368

 Score =  385 bits (990), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 193/294 (65%), Positives = 229/294 (77%), Gaps = 3/294 (1%)

Query: 8   KVIDVKAVAMQIRQDIKAEIYRMKEAVGVTPGLAVILVGDRNPIENYIVRDKKRACETVG 67
           KVID K VA QIR +I  E+ RM+EA GV PGLAVILVGDR     Y VR+KK+ACETVG
Sbjct: 78  KVIDGKTVAKQIRDEIAVEVSRMREAAGVIPGLAVILVGDRKDSATY-VRNKKKACETVG 136

Query: 68  INFLEVRLPEDSTENEILKHISLLNDDPSVHGNVFQIPLSRHMKKENLWKGVRIDKDVEG 127
           IN LEV LPEDSTE E+L HI+  NDDPSVHG + Q+PL  HM ++N+   VRI+KDV+G
Sbjct: 137 INSLEVNLPEDSTEEEVLNHIAGYNDDPSVHGILVQLPLPSHMNEQNVLNAVRIEKDVDG 196

Query: 128 FHPFNIARLGTPIGEEPRFVPCTPLGCIELLHIYNVPISGKRAVVIGRRNDFVGLPAAHL 187
           FHP NI RL    G EP FVPCTP GCIELLH Y V I GKRAVVIGR N  VG+PAA L
Sbjct: 197 FHPLNIGRLAMR-GREPLFVPCTPKGCIELLHRYGVSIKGKRAVVIGRSN-IVGMPAALL 254

Query: 188 LQREGARVSVVDSKTSNPEELTRQADIVISFAGRPNLVRRSWIKDGAVIIDAGASLAKDP 247
           LQRE A VS+V S+T+NPEE+ RQADI+I+  G+PN+V+ SWIK GAVIID G +   DP
Sbjct: 255 LQREDATVSIVHSRTTNPEEIIRQADIIIAAVGQPNMVKGSWIKPGAVIIDVGINPVDDP 314

Query: 248 NRPGGFRWVGDVCYEEAIKLASAMTPIHGGVGPMAMAMLLQNTLLSAKRMHNFE 301
           +   G++ VGDVCYEEA+K+ASA+TP+ GGVGPM +AMLLQNTL+SAKR+H+FE
Sbjct: 315 SSSRGYKLVGDVCYEEAVKVASAITPVPGGVGPMTIAMLLQNTLISAKRIHSFE 368


>Medtr7g076680.1 | methylenetetrahydrofolate dehydrogenase | HC |
           chr7:28900731-28896287 | 20130731
          Length = 351

 Score =  385 bits (990), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 193/294 (65%), Positives = 229/294 (77%), Gaps = 3/294 (1%)

Query: 8   KVIDVKAVAMQIRQDIKAEIYRMKEAVGVTPGLAVILVGDRNPIENYIVRDKKRACETVG 67
           KVID K VA QIR +I  E+ RM+EA GV PGLAVILVGDR     Y VR+KK+ACETVG
Sbjct: 61  KVIDGKTVAKQIRDEIAVEVSRMREAAGVIPGLAVILVGDRKDSATY-VRNKKKACETVG 119

Query: 68  INFLEVRLPEDSTENEILKHISLLNDDPSVHGNVFQIPLSRHMKKENLWKGVRIDKDVEG 127
           IN LEV LPEDSTE E+L HI+  NDDPSVHG + Q+PL  HM ++N+   VRI+KDV+G
Sbjct: 120 INSLEVNLPEDSTEEEVLNHIAGYNDDPSVHGILVQLPLPSHMNEQNVLNAVRIEKDVDG 179

Query: 128 FHPFNIARLGTPIGEEPRFVPCTPLGCIELLHIYNVPISGKRAVVIGRRNDFVGLPAAHL 187
           FHP NI RL    G EP FVPCTP GCIELLH Y V I GKRAVVIGR N  VG+PAA L
Sbjct: 180 FHPLNIGRLAMR-GREPLFVPCTPKGCIELLHRYGVSIKGKRAVVIGRSN-IVGMPAALL 237

Query: 188 LQREGARVSVVDSKTSNPEELTRQADIVISFAGRPNLVRRSWIKDGAVIIDAGASLAKDP 247
           LQRE A VS+V S+T+NPEE+ RQADI+I+  G+PN+V+ SWIK GAVIID G +   DP
Sbjct: 238 LQREDATVSIVHSRTTNPEEIIRQADIIIAAVGQPNMVKGSWIKPGAVIIDVGINPVDDP 297

Query: 248 NRPGGFRWVGDVCYEEAIKLASAMTPIHGGVGPMAMAMLLQNTLLSAKRMHNFE 301
           +   G++ VGDVCYEEA+K+ASA+TP+ GGVGPM +AMLLQNTL+SAKR+H+FE
Sbjct: 298 SSSRGYKLVGDVCYEEAVKVASAITPVPGGVGPMTIAMLLQNTLISAKRIHSFE 351


>Medtr7g076680.2 | methylenetetrahydrofolate dehydrogenase | HC |
           chr7:28900731-28896314 | 20130731
          Length = 347

 Score =  384 bits (987), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 193/294 (65%), Positives = 229/294 (77%), Gaps = 3/294 (1%)

Query: 8   KVIDVKAVAMQIRQDIKAEIYRMKEAVGVTPGLAVILVGDRNPIENYIVRDKKRACETVG 67
           KVID K VA QIR +I  E+ RM+EA GV PGLAVILVGDR     Y VR+KK+ACETVG
Sbjct: 57  KVIDGKTVAKQIRDEIAVEVSRMREAAGVIPGLAVILVGDRKDSATY-VRNKKKACETVG 115

Query: 68  INFLEVRLPEDSTENEILKHISLLNDDPSVHGNVFQIPLSRHMKKENLWKGVRIDKDVEG 127
           IN LEV LPEDSTE E+L HI+  NDDPSVHG + Q+PL  HM ++N+   VRI+KDV+G
Sbjct: 116 INSLEVNLPEDSTEEEVLNHIAGYNDDPSVHGILVQLPLPSHMNEQNVLNAVRIEKDVDG 175

Query: 128 FHPFNIARLGTPIGEEPRFVPCTPLGCIELLHIYNVPISGKRAVVIGRRNDFVGLPAAHL 187
           FHP NI RL    G EP FVPCTP GCIELLH Y V I GKRAVVIGR N  VG+PAA L
Sbjct: 176 FHPLNIGRLAMR-GREPLFVPCTPKGCIELLHRYGVSIKGKRAVVIGRSN-IVGMPAALL 233

Query: 188 LQREGARVSVVDSKTSNPEELTRQADIVISFAGRPNLVRRSWIKDGAVIIDAGASLAKDP 247
           LQRE A VS+V S+T+NPEE+ RQADI+I+  G+PN+V+ SWIK GAVIID G +   DP
Sbjct: 234 LQREDATVSIVHSRTTNPEEIIRQADIIIAAVGQPNMVKGSWIKPGAVIIDVGINPVDDP 293

Query: 248 NRPGGFRWVGDVCYEEAIKLASAMTPIHGGVGPMAMAMLLQNTLLSAKRMHNFE 301
           +   G++ VGDVCYEEA+K+ASA+TP+ GGVGPM +AMLLQNTL+SAKR+H+FE
Sbjct: 294 SSSRGYKLVGDVCYEEAVKVASAITPVPGGVGPMTIAMLLQNTLISAKRIHSFE 347


>Medtr7g108580.1 | cytoplasmic C-1-tetrahydrofolate synthase | HC |
           chr7:44234483-44237478 | 20130731
          Length = 293

 Score =  288 bits (737), Expect = 5e-78,   Method: Compositional matrix adjust.
 Identities = 145/290 (50%), Positives = 197/290 (67%), Gaps = 3/290 (1%)

Query: 7   AKVIDVKAVAMQIRQDIKAEIYRMKEAVGVTPGLAVILVGDRNPIENYIVRDKKRACETV 66
           A VID KAVA  IR +I  E+  + E  G  PGLAV++VG+R   E+Y VR K++AC  +
Sbjct: 2   ATVIDGKAVAQTIRSEITDEVRLLSEKYGKVPGLAVVIVGNRQDSESY-VRTKRKACADL 60

Query: 67  GINFLEVRLPEDSTENEILKHISLLNDDPSVHGNVFQIPLSRHMKKENLWKGVRIDKDVE 126
           GI   ++ LPE  +E E++KH+  LN DP+VHG + Q+PL +H+ +E +   + ++KDV+
Sbjct: 61  GIKNFDIDLPEQISEAEVIKHVHQLNADPNVHGILVQLPLPKHINEEKVLTEISLEKDVD 120

Query: 127 GFHPFNIARLGTPIGEEPRFVPCTPLGCIELLHIYNVPISGKRAVVIGRRNDFVGLPAAH 186
           GFHP NI +L    G +P FVPCTP  C+ELL    V I GKRAVV+GR N  VGLP + 
Sbjct: 121 GFHPLNIGKLAMK-GRDPLFVPCTPKACLELLSRSGVSIKGKRAVVVGRSN-IVGLPVSL 178

Query: 187 LLQREGARVSVVDSKTSNPEELTRQADIVISFAGRPNLVRRSWIKDGAVIIDAGASLAKD 246
           LL +  A V++  S TS PE++ R+ADIVI+ AG+  +++ SWIK GA +ID G +   D
Sbjct: 179 LLLKADATVTIAHSHTSQPEDIIREADIVIAAAGQAKMIKGSWIKPGAAVIDVGTNSVDD 238

Query: 247 PNRPGGFRWVGDVCYEEAIKLASAMTPIHGGVGPMAMAMLLQNTLLSAKR 296
           P R  G+R VGDV +EEA K+A  +TP+ GGVGPM + MLL+NTL SAKR
Sbjct: 239 PTRKAGYRLVGDVDFEEASKVAGWITPVPGGVGPMTVTMLLKNTLESAKR 288


>Medtr1g030450.1 | methylenetetrahydrofolate dehydrogenase | HC |
           chr1:10595287-10589370 | 20130731
          Length = 361

 Score =  282 bits (721), Expect = 3e-76,   Method: Compositional matrix adjust.
 Identities = 150/294 (51%), Positives = 194/294 (65%), Gaps = 3/294 (1%)

Query: 7   AKVIDVKAVAMQIRQDIKAEIYRMKEAVGVTPGLAVILVGDRNPIENYIVRDKKRACETV 66
           A VID K +A +IR  I  ++ +MK+ +G  PGLAVILVG R     Y VR+K  ACE V
Sbjct: 70  ATVIDGKLMATEIRSKIADQVRQMKKGLGKVPGLAVILVGQRRDSLTY-VRNKIIACEEV 128

Query: 67  GINFLEVRLPEDSTENEILKHISLLNDDPSVHGNVFQIPLSRHMKKENLWKGVRIDKDVE 126
           G+  +   LP D  + ++   I   N DPS+HG + Q+PL +H+ +E +   V ++KDV+
Sbjct: 129 GMKSVVTELPTDCADADVQNAIMRFNKDPSIHGILVQLPLPQHLDEEKILDAVCLEKDVD 188

Query: 127 GFHPFNIARLGTPIGEEPRFVPCTPLGCIELLHIYNVPISGKRAVVIGRRNDFVGLPAAH 186
           GFHP N+  L    G EP F+PCT   CIELL    V I GK+AVVIGR N  VGLP + 
Sbjct: 189 GFHPVNMGNLALR-GREPLFIPCTTKACIELLIRSGVEIMGKKAVVIGRSN-IVGLPTSL 246

Query: 187 LLQREGARVSVVDSKTSNPEELTRQADIVISFAGRPNLVRRSWIKDGAVIIDAGASLAKD 246
           LLQR  A V+VV + T NPE++T +ADIV+S AG PNLV  +WIK GA +ID G    +D
Sbjct: 247 LLQRHHATVTVVHAFTENPEQITSEADIVVSAAGVPNLVCGNWIKSGATVIDVGTIPVED 306

Query: 247 PNRPGGFRWVGDVCYEEAIKLASAMTPIHGGVGPMAMAMLLQNTLLSAKRMHNF 300
           P+   G+R VGDVC+EE IK+AS +TP+ GGVGPM + MLL NTL SAKR+ NF
Sbjct: 307 PSCEDGYRLVGDVCFEEVIKVASVITPVPGGVGPMTVTMLLVNTLDSAKRLFNF 360


>Medtr3g007490.1 | methylenetetrahydrofolate dehydrogenase | HC |
           chr3:1040089-1043268 | 20130731
          Length = 363

 Score =  264 bits (674), Expect = 9e-71,   Method: Compositional matrix adjust.
 Identities = 140/290 (48%), Positives = 189/290 (65%), Gaps = 4/290 (1%)

Query: 7   AKVIDVKAVAMQIRQDIKAEIYRMKEAVGVTPGLAVILVGDRNPIENYIVRDKKRACETV 66
           A +++ K +A  I+  +  EI RMK  +G  P LA +LVGDR     +I   K +ACE V
Sbjct: 73  AAILEGKPIANHIKLKVADEIRRMKSDIGKFPKLAFVLVGDRRDSHTFI-HLKSKACEKV 131

Query: 67  GINFLEVRLPEDSTENEILKHISLLNDDPSVHGNVFQIPLSRHMKKENLWKGVRIDKDVE 126
           GI  +  +LPE+ TENE+L  +S LNDD  VHG + Q+PL +H+ +E +   V  +KDV+
Sbjct: 132 GIETVVSQLPENCTENELLDVVSGLNDDQDVHGIIVQLPLPQHLDEERIMNIVSPEKDVD 191

Query: 127 GFHPFNIARLGTPIGEEPRFVPCTPLGCIELLHIYNVPISGKRAVVIGRRNDFVGLPAAH 186
           GFHP NI  L    G +P F+PC    CIELL  + + I GKR  +IG R    GLP + 
Sbjct: 192 GFHPLNIGNLARS-GRKPFFIPCASRSCIELLLNHGIEIRGKRVAIIG-RGKIAGLPTSL 249

Query: 187 LLQREGARVSVVDSKTSNPEELTRQADIVISFAGRPNLVRRSWIKDGAVIIDAGASLAKD 246
           LLQR  A VS++ + T NPE +T +ADIV++  G PN+VR  WIK GAV+ID G +  KD
Sbjct: 250 LLQRHHATVSLLHAYTKNPERITSEADIVVTDVGIPNIVRGDWIKKGAVVIDMGTNQVKD 309

Query: 247 PNRPGGFRWVGDVCYEEAIKLASAMTPIHGGVGPMAMAMLLQNTLLSAKR 296
           P+    FR  GDVC+EEA+K+ASA+TP+ GG+GP+ ++MLL NTL SAKR
Sbjct: 310 PSS-QVFRVTGDVCFEEAVKVASAITPVPGGIGPVTVSMLLSNTLDSAKR 358


>Medtr3g007580.1 | methylenetetrahydrofolate dehydrogenase | HC |
           chr3:1065282-1067045 | 20130731
          Length = 134

 Score = 81.3 bits (199), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 43/103 (41%), Positives = 63/103 (61%), Gaps = 8/103 (7%)

Query: 141 GEEPRFVPCTPLGCIELLHI-YNVPISGKRAVVIGRRNDFVGLPAAHLLQREGARVSVVD 199
           G +P F+PC    CIELL + + + I GK+  +IGR +  VGLPA+ L+Q      S   
Sbjct: 20  GRKPFFIPCASKSCIELLLLNHGIEIRGKKVAIIGR-DKIVGLPASLLMQ------SASY 72

Query: 200 SKTSNPEELTRQADIVISFAGRPNLVRRSWIKDGAVIIDAGAS 242
               N E++T +A+IV+++ G  N+VR  WIK GAV+ID G +
Sbjct: 73  MHKQNSEQITSEANIVVTYIGIRNIVRGDWIKKGAVVIDTGTN 115