Miyakogusa Predicted Gene

Lj1g3v4446660.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v4446660.1 tr|A9SV66|A9SV66_PHYPA Predicted protein
OS=Physcomitrella patens subsp. patens
GN=PHYPADRAFT_188742,34.62,5e-18,SUBFAMILY NOT NAMED,NULL; FAMILY NOT
NAMED,NULL; Kelch motif,NULL; no description,Galactose
oxidase,,NODE_60282_length_971_cov_46.759010.path1.1
         (166 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr7g095220.1 | kelch repeat F-box protein | HC | chr7:3810494...   280   4e-76
Medtr7g095220.2 | kelch repeat F-box protein | HC | chr7:3810459...   280   4e-76

>Medtr7g095220.1 | kelch repeat F-box protein | HC |
           chr7:38104949-38100131 | 20130731
          Length = 345

 Score =  280 bits (716), Expect = 4e-76,   Method: Compositional matrix adjust.
 Identities = 131/166 (78%), Positives = 149/166 (89%)

Query: 1   MYDPEKDVWIPMPDLHRTHNSACSGVMIGGKVHVLHKDMSTVQVLDNAGAGWIVEDCGWF 60
           MYDPEKDVW PMPDLHRT NSACSG++IGGK+HVLHKDMSTVQVLDNAGA WIVE+C W 
Sbjct: 180 MYDPEKDVWTPMPDLHRTQNSACSGIVIGGKMHVLHKDMSTVQVLDNAGARWIVEECEWL 239

Query: 61  QSPMAVVQDALYVMSHGLIHKQEKDVRKVVGSASEFRRRIGFGMIGLGNELYVIGGFIGP 120
           Q PMAVVQDAL VMS+G I KQ+K+ RK+V SA++F++RIGF MIGLG++LY+IGG IGP
Sbjct: 240 QGPMAVVQDALCVMSNGSIIKQDKEGRKIVSSATDFKKRIGFAMIGLGDDLYMIGGVIGP 299

Query: 121 DRLNWDLKPLSDVDVLTLGNERPTWRQAAPMTRCRGTIFGCTLLRI 166
           DR NWD+KPLSDVDVL LG+ERPTWRQ APMTRCRGTI GCTL+RI
Sbjct: 300 DRWNWDIKPLSDVDVLGLGSERPTWRQIAPMTRCRGTIVGCTLMRI 345


>Medtr7g095220.2 | kelch repeat F-box protein | HC |
           chr7:38104594-38100131 | 20130731
          Length = 345

 Score =  280 bits (716), Expect = 4e-76,   Method: Compositional matrix adjust.
 Identities = 131/166 (78%), Positives = 149/166 (89%)

Query: 1   MYDPEKDVWIPMPDLHRTHNSACSGVMIGGKVHVLHKDMSTVQVLDNAGAGWIVEDCGWF 60
           MYDPEKDVW PMPDLHRT NSACSG++IGGK+HVLHKDMSTVQVLDNAGA WIVE+C W 
Sbjct: 180 MYDPEKDVWTPMPDLHRTQNSACSGIVIGGKMHVLHKDMSTVQVLDNAGARWIVEECEWL 239

Query: 61  QSPMAVVQDALYVMSHGLIHKQEKDVRKVVGSASEFRRRIGFGMIGLGNELYVIGGFIGP 120
           Q PMAVVQDAL VMS+G I KQ+K+ RK+V SA++F++RIGF MIGLG++LY+IGG IGP
Sbjct: 240 QGPMAVVQDALCVMSNGSIIKQDKEGRKIVSSATDFKKRIGFAMIGLGDDLYMIGGVIGP 299

Query: 121 DRLNWDLKPLSDVDVLTLGNERPTWRQAAPMTRCRGTIFGCTLLRI 166
           DR NWD+KPLSDVDVL LG+ERPTWRQ APMTRCRGTI GCTL+RI
Sbjct: 300 DRWNWDIKPLSDVDVLGLGSERPTWRQIAPMTRCRGTIVGCTLMRI 345