Miyakogusa Predicted Gene

Lj1g3v4434330.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v4434330.1 Non Characterized Hit- tr|A5BG99|A5BG99_VITVI
Putative uncharacterized protein OS=Vitis vinifera
GN=,55.81,4e-18,seg,NULL; no description,NULL; RNI-like,NULL;
F-BOX/LRR  PROTEIN-RELATED, ARATH,NULL; F-BOX/LEUCINE ,CUFF.35686.1
         (494 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr7g095030.1 | F-box protein SKIP2 | HC | chr7:37984180-37989...   662   0.0  
Medtr7g095030.2 | F-box protein SKIP2 | HC | chr7:37984180-37989...   656   0.0  
Medtr7g095030.3 | F-box protein SKIP2 | HC | chr7:37984180-37989...   656   0.0  
Medtr4g095000.1 | F-box protein, putative | HC | chr4:39476733-3...   489   e-138
Medtr7g094400.1 | hypothetical protein | LC | chr7:37580210-3757...    55   2e-07

>Medtr7g095030.1 | F-box protein SKIP2 | HC | chr7:37984180-37989655
           | 20130731
          Length = 510

 Score =  662 bits (1707), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 347/498 (69%), Positives = 375/498 (75%), Gaps = 24/498 (4%)

Query: 1   MAKRQCPSENPRPEQVENLLNAFXXXXXXXXXXXXXXFENLLQSMPAPHDSSDLIDRALK 60
           MAKR CP++NPR E VE++L  F               ENLLQSMPA    +DLIDRALK
Sbjct: 21  MAKRPCPAQNPRME-VEHVLEEFLSLSDCPSLSIDLSLENLLQSMPA---DTDLIDRALK 76

Query: 61  MGSLLLHAANHSSRKRASHHNSLSWPLSHDLTIKVFSMLDTQSLCYXXXXXXXXXXXXXD 120
           MGSLLL AA HSSRKRA +HNS+ WPL  DLT K+FSMLDTQSLC+             D
Sbjct: 77  MGSLLLDAAKHSSRKRAYNHNSIVWPLPPDLTFKIFSMLDTQSLCFVSAACSFFSKCAKD 136

Query: 121 PMCYANLDLTTPVPKVNNAVVATMIQRAGKALRSLKLGVVPGATTSPGCCQPLICAVRNA 180
           P+CY NLDL T VPKVNNAVVATMIQRAGKALRS+KLGVVP      G CQP +  VR A
Sbjct: 137 PLCYENLDLRTLVPKVNNAVVATMIQRAGKALRSIKLGVVPVTACPLGFCQPSVSTVRKA 196

Query: 181 IVDVSNISWIDKRSRQGRDPSSILTRCCLSPLSGDGGAPGALLRKLHLYNIERMDNASLG 240
           IV+  N SW DKRSRQGR+ SSILTRCCLSPLSGDGGAPGALLRKLHLYNIERMDN SL 
Sbjct: 197 IVEAPNYSWNDKRSRQGRE-SSILTRCCLSPLSGDGGAPGALLRKLHLYNIERMDNTSLC 255

Query: 241 GALLACPSLLDLEIVGLHVELRQTLMSVSANCHLIERLCFESSKAGRDDSLKAQTCSELV 300
            AL ACPSLLDLEIVG+HVELRQTLMSVSANCHLIERL FESS+ GRDDSLK QTCSELV
Sbjct: 256 CALSACPSLLDLEIVGIHVELRQTLMSVSANCHLIERLFFESSRTGRDDSLKTQTCSELV 315

Query: 301 NNCPHLASLSLRGFKLHDCKVRILVKGFRKLKYVDFSTSYSITGNFLRNLGSCNGGNLLE 360
           NNCPHL SLSLRGFKLHDCKVRILVKGFRKL+YVDFS+SYSITG+FLRNLG CNGGN LE
Sbjct: 316 NNCPHLTSLSLRGFKLHDCKVRILVKGFRKLQYVDFSSSYSITGSFLRNLGGCNGGNFLE 375

Query: 361 VLILRDCMHLKETEATRLLTAILAGDFKLLVHLDISNREGLASEVDWYRRCYNPSTMPIK 420
           VLILRDCMHLKE E  RLL A+L G+FKLL HLDISNREGLA E DWY RCYN S MPIK
Sbjct: 376 VLILRDCMHLKEIEVARLLIAVLEGEFKLLKHLDISNREGLACEADWYHRCYNSSIMPIK 435

Query: 421 QVLEARPDMHLVAEYPSEGSYM----EFDADDSDPSVPLXXXXXXXXXXXXXXXXXXXYN 476
           QVLEARP M +VAEYPSEGS +    +F    SD S+ +                   Y 
Sbjct: 436 QVLEARPGMRVVAEYPSEGSDISLLSQFSNHTSDGSIFM-------------STSESSYY 482

Query: 477 SDQGSGNEDAPDANYVVY 494
           SD  SGNE+  DA  V+Y
Sbjct: 483 SDHVSGNEEGQDA--VIY 498


>Medtr7g095030.2 | F-box protein SKIP2 | HC | chr7:37984180-37989463
           | 20130731
          Length = 457

 Score =  656 bits (1692), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 333/442 (75%), Positives = 356/442 (80%), Gaps = 5/442 (1%)

Query: 1   MAKRQCPSENPRPEQVENLLNAFXXXXXXXXXXXXXXFENLLQSMPAPHDSSDLIDRALK 60
           MAKR CP++NPR E VE++L  F               ENLLQSMPA    +DLIDRALK
Sbjct: 21  MAKRPCPAQNPRME-VEHVLEEFLSLSDCPSLSIDLSLENLLQSMPA---DTDLIDRALK 76

Query: 61  MGSLLLHAANHSSRKRASHHNSLSWPLSHDLTIKVFSMLDTQSLCYXXXXXXXXXXXXXD 120
           MGSLLL AA HSSRKRA +HNS+ WPL  DLT K+FSMLDTQSLC+             D
Sbjct: 77  MGSLLLDAAKHSSRKRAYNHNSIVWPLPPDLTFKIFSMLDTQSLCFVSAACSFFSKCAKD 136

Query: 121 PMCYANLDLTTPVPKVNNAVVATMIQRAGKALRSLKLGVVPGATTSPGCCQPLICAVRNA 180
           P+CY NLDL T VPKVNNAVVATMIQRAGKALRS+KLGVVP      G CQP +  VR A
Sbjct: 137 PLCYENLDLRTLVPKVNNAVVATMIQRAGKALRSIKLGVVPVTACPLGFCQPSVSTVRKA 196

Query: 181 IVDVSNISWIDKRSRQGRDPSSILTRCCLSPLSGDGGAPGALLRKLHLYNIERMDNASLG 240
           IV+  N SW DKRSRQGR+ SSILTRCCLSPLSGDGGAPGALLRKLHLYNIERMDN SL 
Sbjct: 197 IVEAPNYSWNDKRSRQGRE-SSILTRCCLSPLSGDGGAPGALLRKLHLYNIERMDNTSLC 255

Query: 241 GALLACPSLLDLEIVGLHVELRQTLMSVSANCHLIERLCFESSKAGRDDSLKAQTCSELV 300
            AL ACPSLLDLEIVG+HVELRQTLMSVSANCHLIERL FESS+ GRDDSLK QTCSELV
Sbjct: 256 CALSACPSLLDLEIVGIHVELRQTLMSVSANCHLIERLFFESSRTGRDDSLKTQTCSELV 315

Query: 301 NNCPHLASLSLRGFKLHDCKVRILVKGFRKLKYVDFSTSYSITGNFLRNLGSCNGGNLLE 360
           NNCPHL SLSLRGFKLHDCKVRILVKGFRKL+YVDFS+SYSITG+FLRNLG CNGGN LE
Sbjct: 316 NNCPHLTSLSLRGFKLHDCKVRILVKGFRKLQYVDFSSSYSITGSFLRNLGGCNGGNFLE 375

Query: 361 VLILRDCMHLKETEATRLLTAILAGDFKLLVHLDISNREGLASEVDWYRRCYNPSTMPIK 420
           VLILRDCMHLKE E  RLL A+L G+FKLL HLDISNREGLA E DWY RCYN S MPIK
Sbjct: 376 VLILRDCMHLKEIEVARLLIAVLEGEFKLLKHLDISNREGLACEADWYHRCYNSSIMPIK 435

Query: 421 QVLEARPDMHLVAEYPSEGSYM 442
           QVLEARP M +VAEYPSEGSY+
Sbjct: 436 QVLEARPGMRVVAEYPSEGSYV 457


>Medtr7g095030.3 | F-box protein SKIP2 | HC | chr7:37984180-37989463
           | 20130731
          Length = 457

 Score =  656 bits (1692), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 333/442 (75%), Positives = 356/442 (80%), Gaps = 5/442 (1%)

Query: 1   MAKRQCPSENPRPEQVENLLNAFXXXXXXXXXXXXXXFENLLQSMPAPHDSSDLIDRALK 60
           MAKR CP++NPR E VE++L  F               ENLLQSMPA    +DLIDRALK
Sbjct: 21  MAKRPCPAQNPRME-VEHVLEEFLSLSDCPSLSIDLSLENLLQSMPA---DTDLIDRALK 76

Query: 61  MGSLLLHAANHSSRKRASHHNSLSWPLSHDLTIKVFSMLDTQSLCYXXXXXXXXXXXXXD 120
           MGSLLL AA HSSRKRA +HNS+ WPL  DLT K+FSMLDTQSLC+             D
Sbjct: 77  MGSLLLDAAKHSSRKRAYNHNSIVWPLPPDLTFKIFSMLDTQSLCFVSAACSFFSKCAKD 136

Query: 121 PMCYANLDLTTPVPKVNNAVVATMIQRAGKALRSLKLGVVPGATTSPGCCQPLICAVRNA 180
           P+CY NLDL T VPKVNNAVVATMIQRAGKALRS+KLGVVP      G CQP +  VR A
Sbjct: 137 PLCYENLDLRTLVPKVNNAVVATMIQRAGKALRSIKLGVVPVTACPLGFCQPSVSTVRKA 196

Query: 181 IVDVSNISWIDKRSRQGRDPSSILTRCCLSPLSGDGGAPGALLRKLHLYNIERMDNASLG 240
           IV+  N SW DKRSRQGR+ SSILTRCCLSPLSGDGGAPGALLRKLHLYNIERMDN SL 
Sbjct: 197 IVEAPNYSWNDKRSRQGRE-SSILTRCCLSPLSGDGGAPGALLRKLHLYNIERMDNTSLC 255

Query: 241 GALLACPSLLDLEIVGLHVELRQTLMSVSANCHLIERLCFESSKAGRDDSLKAQTCSELV 300
            AL ACPSLLDLEIVG+HVELRQTLMSVSANCHLIERL FESS+ GRDDSLK QTCSELV
Sbjct: 256 CALSACPSLLDLEIVGIHVELRQTLMSVSANCHLIERLFFESSRTGRDDSLKTQTCSELV 315

Query: 301 NNCPHLASLSLRGFKLHDCKVRILVKGFRKLKYVDFSTSYSITGNFLRNLGSCNGGNLLE 360
           NNCPHL SLSLRGFKLHDCKVRILVKGFRKL+YVDFS+SYSITG+FLRNLG CNGGN LE
Sbjct: 316 NNCPHLTSLSLRGFKLHDCKVRILVKGFRKLQYVDFSSSYSITGSFLRNLGGCNGGNFLE 375

Query: 361 VLILRDCMHLKETEATRLLTAILAGDFKLLVHLDISNREGLASEVDWYRRCYNPSTMPIK 420
           VLILRDCMHLKE E  RLL A+L G+FKLL HLDISNREGLA E DWY RCYN S MPIK
Sbjct: 376 VLILRDCMHLKEIEVARLLIAVLEGEFKLLKHLDISNREGLACEADWYHRCYNSSIMPIK 435

Query: 421 QVLEARPDMHLVAEYPSEGSYM 442
           QVLEARP M +VAEYPSEGSY+
Sbjct: 436 QVLEARPGMRVVAEYPSEGSYV 457


>Medtr4g095000.1 | F-box protein, putative | HC |
           chr4:39476733-39472979 | 20130731
          Length = 429

 Score =  489 bits (1260), Expect = e-138,   Method: Compositional matrix adjust.
 Identities = 251/343 (73%), Positives = 271/343 (79%), Gaps = 5/343 (1%)

Query: 154 SLKLGVVPGATTSPGCCQPLICAVRNAIVDVSNISWIDKRSRQGRDPSSILTRCCLSPLS 213
           S+KLGVVP      G CQP +  VR AIV+  N SW DKRSRQGR+ SSILTRCCLSPLS
Sbjct: 78  SIKLGVVPVTACPLGFCQPSVSTVRKAIVEAPNYSWNDKRSRQGRE-SSILTRCCLSPLS 136

Query: 214 GDGGAPGALLRKLHLYNIERMDNASLGGALLACPSLLDLEIVGLHVELRQTLMSVSANCH 273
           GDGGAPGALLRKLHLYNIERMDN SL  AL ACPSLLDLEIVG+HVELRQTLMSVSANCH
Sbjct: 137 GDGGAPGALLRKLHLYNIERMDNTSLCCALSACPSLLDLEIVGIHVELRQTLMSVSANCH 196

Query: 274 LIERLCFESSKAGRDDSLKAQTCSELVNNCPHLASLSLRGFKLHDCKVRILVKGFRKLKY 333
           LIERL FESS+ GRDDSLK QTCSELVNNCPHL SLSLRGFKLHDCKVRILVKGFRKL+Y
Sbjct: 197 LIERLFFESSRTGRDDSLKTQTCSELVNNCPHLTSLSLRGFKLHDCKVRILVKGFRKLQY 256

Query: 334 VDFSTSYSITGNFLRNLGSCNGGNLLEVLILRDCMHLKETEATRLLTAILAGDFKLLVHL 393
           VDFS+SYSITG+FL+NLG CNGGN LEVLILRDCMHLKE E  RLL A+L G+FKLL HL
Sbjct: 257 VDFSSSYSITGSFLKNLGGCNGGNFLEVLILRDCMHLKEIEVARLLIAVLEGEFKLLKHL 316

Query: 394 DISNREGLASEVDWYRRCYNPSTMPIKQVLEARPDMHLVAEYPSEGSYMEF-DAD-DSDP 451
           DISNREGLA E DWYRRCYN + MPIKQVLEARP M +VAEYPSEGSY++  D D +SD 
Sbjct: 317 DISNREGLACEADWYRRCYNSTIMPIKQVLEARPGMRVVAEYPSEGSYVKTCDTDMNSDI 376

Query: 452 SVPLXXXXXXXXXXXXXXXXXXXYNSDQGSGNEDAPDANYVVY 494
           S+                     Y SD  SG E+  DA  V+Y
Sbjct: 377 SLLSQFSNHTSDGSIFMSTSESSYYSDHVSGKEEGQDA--VIY 417


>Medtr7g094400.1 | hypothetical protein | LC |
           chr7:37580210-37578283 | 20130731
          Length = 116

 Score = 55.1 bits (131), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 25/33 (75%), Positives = 28/33 (84%)

Query: 121 PMCYANLDLTTPVPKVNNAVVATMIQRAGKALR 153
           P+CY NL L T +P+VNNAVVATMIQR GKALR
Sbjct: 38  PLCYENLHLRTLLPRVNNAVVATMIQRVGKALR 70