Miyakogusa Predicted Gene

Lj1g3v4433190.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v4433190.1 Non Characterized Hit- tr|I1N9H7|I1N9H7_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.18667
PE,82.23,0,GTP1OBG,GTP binding domain; GTP-BINDING
PROTEIN-RELATED,NULL; MMR_HSR1,GTP binding domain; no
descri,CUFF.32351.1
         (374 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr7g094890.1 | ribosome biogenesis GTPase A | HC | chr7:37900...   590   e-169
Medtr7g091320.2 | P-loop nucleoside triphosphate hydrolase super...    99   8e-21
Medtr7g091320.1 | P-loop nucleoside triphosphate hydrolase super...    99   8e-21
Medtr7g091320.3 | P-loop nucleoside triphosphate hydrolase super...    99   8e-21
Medtr4g081850.1 | nucleolar GTP-binding-like protein | HC | chr4...    79   5e-15
Medtr2g079510.1 | nucleolar GTP-binding-like protein | HC | chr2...    79   6e-15
Medtr1g048030.1 | guanine nucleotide-binding-like protein | HC |...    77   4e-14
Medtr2g061470.1 | P-loop nucleoside triphosphate hydrolase super...    70   2e-12

>Medtr7g094890.1 | ribosome biogenesis GTPase A | HC |
           chr7:37900080-37894545 | 20130731
          Length = 373

 Score =  590 bits (1521), Expect = e-169,   Method: Compositional matrix adjust.
 Identities = 305/389 (78%), Positives = 329/389 (84%), Gaps = 31/389 (7%)

Query: 1   MAMSVQLS-----SSSGLWVPNSP--------HRVPSRGKPGSPSALAATPPTLSSQPPT 47
           M MSVQ       SSS LW+PNSP          +P+R    S S LAATP TL SQ PT
Sbjct: 1   MVMSVQFQLSSSPSSSRLWLPNSPSPPISISPQFIPTRCSRFSTSPLAATP-TLQSQYPT 59

Query: 48  IQIVGLRGPSWSENGIANPNSNTFDGCEGEN--NLWSELDTDLYHWTKALRPVQWFPGHI 105
           IQI+G               +NTFDG EG    +LW+ LDTDLYHWTK LRPVQWFPGHI
Sbjct: 60  IQIIG---------------NNTFDGSEGGTGTDLWTGLDTDLYHWTKVLRPVQWFPGHI 104

Query: 106 AKAEKELKEQLRLMDVVIEVRDGRIPMSTTHPQMDLWLGNRKRILVLNREDMISTEDRNA 165
           AKAEKELKEQL+LMDVVIEVRDGRIP+ST+HPQMDLWLGN+KRILVLNREDMIST DRNA
Sbjct: 105 AKAEKELKEQLKLMDVVIEVRDGRIPLSTSHPQMDLWLGNKKRILVLNREDMISTADRNA 164

Query: 166 WAEYFTRNGTKVVFSNGQLGMGTMKLGRLAKELAANVNVKRRAKGLLPRAVRAGIVGYPN 225
           WAEYFTR+GTKVVFSNGQLGMGT+KL RLAKELAA+VNVKRRAKGLLPR VRAGIVGYPN
Sbjct: 165 WAEYFTRHGTKVVFSNGQLGMGTLKLCRLAKELAADVNVKRRAKGLLPRPVRAGIVGYPN 224

Query: 226 VGKSSLINRLLKRRMCPAAPRPGVTRELRWIRFGKDLELLDSPGILPMRISDQSSAIKLA 285
           VGKSSLINRLLKRRMCPAAPRPGVTR+LRW+RFGKDLELLDSPGILPMRISDQS+AIKLA
Sbjct: 225 VGKSSLINRLLKRRMCPAAPRPGVTRDLRWVRFGKDLELLDSPGILPMRISDQSAAIKLA 284

Query: 286 ICDDIGERSYDVTDVAAVLVQMLTKLPAVGGDALRKRYKINVDSQCGKTFVEKLALQLFN 345
           ICDDIGERSYDV DVAA+LVQMLTKLPAVG DAL KRYK  VDS+CGK F+EKLAL LFN
Sbjct: 285 ICDDIGERSYDVADVAAILVQMLTKLPAVGRDALCKRYKFRVDSECGKIFIEKLALHLFN 344

Query: 346 GDVHQASFRVLSDFRKGKFGWTALERPPR 374
           GDVHQA++RVLSDFRKG+FGWT+LERPPR
Sbjct: 345 GDVHQAAYRVLSDFRKGRFGWTSLERPPR 373


>Medtr7g091320.2 | P-loop nucleoside triphosphate hydrolase
           superfamily protein | HC | chr7:36058204-36063524 |
           20130731
          Length = 299

 Score = 98.6 bits (244), Expect = 8e-21,   Method: Compositional matrix adjust.
 Identities = 65/225 (28%), Positives = 113/225 (50%), Gaps = 20/225 (8%)

Query: 98  VQWFPGHIAKAEKELKEQLRLMDVVIEVRDGRIPMSTTHPQMDLWLGNRKRILVLNREDM 157
           + WFPGH+A A + ++ +L+L D+VIEVRD RIP+S+ +  +   L  ++R++ LN++D+
Sbjct: 24  INWFPGHMAAATRAIRNRLKLADLVIEVRDARIPISSINSDLQPHLSLKRRVVALNKKDL 83

Query: 158 ISTEDRNAWAEYFTRNGTKVVFSNGQLGMGTMKLGRLAKELAANVNVKRRAKGLLPRAVR 217
            +    + W  YF       +  N      ++       EL     + +    L+     
Sbjct: 84  ANPNIMHKWVNYFESCKQDCIPINAH-SKSSVTKLLELVELKLKEAISKEPTLLV----- 137

Query: 218 AGIVGYPNVGKSSLINRL---------LKRRMCPAA--PRPGVTRELRWIRFGK--DLEL 264
             +VG PNVGKS LIN +         ++ +M  AA  P PGVT+++   +      + +
Sbjct: 138 -MVVGVPNVGKSCLINSIHQIAHSRFPVQEKMKRAAVGPLPGVTQDIAGFKIANKPSIYV 196

Query: 265 LDSPGILPMRISDQSSAIKLAICDDIGERSYDVTDVAAVLVQMLT 309
           LD+PG+L   ISD  + +KLA+   + +       +A  L+ +L 
Sbjct: 197 LDTPGVLVPSISDIETGLKLALAGSVKDSVVGEERIAQYLLAVLN 241


>Medtr7g091320.1 | P-loop nucleoside triphosphate hydrolase
           superfamily protein | HC | chr7:36058142-36064108 |
           20130731
          Length = 373

 Score = 98.6 bits (244), Expect = 8e-21,   Method: Compositional matrix adjust.
 Identities = 65/225 (28%), Positives = 113/225 (50%), Gaps = 20/225 (8%)

Query: 98  VQWFPGHIAKAEKELKEQLRLMDVVIEVRDGRIPMSTTHPQMDLWLGNRKRILVLNREDM 157
           + WFPGH+A A + ++ +L+L D+VIEVRD RIP+S+ +  +   L  ++R++ LN++D+
Sbjct: 24  INWFPGHMAAATRAIRNRLKLADLVIEVRDARIPISSINSDLQPHLSLKRRVVALNKKDL 83

Query: 158 ISTEDRNAWAEYFTRNGTKVVFSNGQLGMGTMKLGRLAKELAANVNVKRRAKGLLPRAVR 217
            +    + W  YF       +  N      ++       EL     + +    L+     
Sbjct: 84  ANPNIMHKWVNYFESCKQDCIPINAH-SKSSVTKLLELVELKLKEAISKEPTLLV----- 137

Query: 218 AGIVGYPNVGKSSLINRL---------LKRRMCPAA--PRPGVTRELRWIRFGK--DLEL 264
             +VG PNVGKS LIN +         ++ +M  AA  P PGVT+++   +      + +
Sbjct: 138 -MVVGVPNVGKSCLINSIHQIAHSRFPVQEKMKRAAVGPLPGVTQDIAGFKIANKPSIYV 196

Query: 265 LDSPGILPMRISDQSSAIKLAICDDIGERSYDVTDVAAVLVQMLT 309
           LD+PG+L   ISD  + +KLA+   + +       +A  L+ +L 
Sbjct: 197 LDTPGVLVPSISDIETGLKLALAGSVKDSVVGEERIAQYLLAVLN 241


>Medtr7g091320.3 | P-loop nucleoside triphosphate hydrolase
           superfamily protein | HC | chr7:36058214-36064108 |
           20130731
          Length = 373

 Score = 98.6 bits (244), Expect = 8e-21,   Method: Compositional matrix adjust.
 Identities = 65/225 (28%), Positives = 113/225 (50%), Gaps = 20/225 (8%)

Query: 98  VQWFPGHIAKAEKELKEQLRLMDVVIEVRDGRIPMSTTHPQMDLWLGNRKRILVLNREDM 157
           + WFPGH+A A + ++ +L+L D+VIEVRD RIP+S+ +  +   L  ++R++ LN++D+
Sbjct: 24  INWFPGHMAAATRAIRNRLKLADLVIEVRDARIPISSINSDLQPHLSLKRRVVALNKKDL 83

Query: 158 ISTEDRNAWAEYFTRNGTKVVFSNGQLGMGTMKLGRLAKELAANVNVKRRAKGLLPRAVR 217
            +    + W  YF       +  N      ++       EL     + +    L+     
Sbjct: 84  ANPNIMHKWVNYFESCKQDCIPINAH-SKSSVTKLLELVELKLKEAISKEPTLLV----- 137

Query: 218 AGIVGYPNVGKSSLINRL---------LKRRMCPAA--PRPGVTRELRWIRFGK--DLEL 264
             +VG PNVGKS LIN +         ++ +M  AA  P PGVT+++   +      + +
Sbjct: 138 -MVVGVPNVGKSCLINSIHQIAHSRFPVQEKMKRAAVGPLPGVTQDIAGFKIANKPSIYV 196

Query: 265 LDSPGILPMRISDQSSAIKLAICDDIGERSYDVTDVAAVLVQMLT 309
           LD+PG+L   ISD  + +KLA+   + +       +A  L+ +L 
Sbjct: 197 LDTPGVLVPSISDIETGLKLALAGSVKDSVVGEERIAQYLLAVLN 241


>Medtr4g081850.1 | nucleolar GTP-binding-like protein | HC |
           chr4:31881653-31883769 | 20130731
          Length = 563

 Score = 79.3 bits (194), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 73/281 (25%), Positives = 126/281 (44%), Gaps = 42/281 (14%)

Query: 111 ELKEQLRLMDVVIEVRDGRIPMSTTHPQMDLWLG----NRKRILVLNREDMISTEDRNAW 166
           EL + +   DVV++V D R P  T    ++  L     ++  +L+LN+ D+I       W
Sbjct: 198 ELYKVIDSSDVVVQVIDARDPQGTRCYHLEKHLKENCKHKHMVLLLNKCDLIPAWATKGW 257

Query: 167 AEYFTRNGTKVVFS---NGQLGMGTM-----KLGRLAKELAANVNVKRRAKGLLPRAVRA 218
               ++    + F    N   G G++     +  RL  +                +A+  
Sbjct: 258 LRVLSKEYPTLAFHASINKSFGKGSLLSILRQFARLKSD---------------KQAISV 302

Query: 219 GIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRELRWIRFGKDLELLDSPGILPMRISDQ 278
           G VGYPNVGKSS+IN L  + +C  AP PG T+  ++I   K + L+D PG++      +
Sbjct: 303 GFVGYPNVGKSSVINTLRTKNVCKVAPIPGETKVWQYITLTKRIFLIDCPGVVYHNNDSE 362

Query: 279 SSAIKLAICDDIGERSYDVTDVAAVLVQMLTKLPAVGGDALRKRYKIN--VDSQCGKTFV 336
           +  +   +      R  ++ D A  + ++L +   V  + L + YKI   VD       +
Sbjct: 363 TDVVLKGVV-----RVTNLKDAADHIGEVLKR---VKKEHLTRAYKIKEWVDENDFLLQL 414

Query: 337 EKLALQLFNG---DVHQASFRVLSDFRKGKFGWTALERPPR 374
            K + +L  G   D+  A+  +L D+++GK  +     PPR
Sbjct: 415 CKSSGKLLKGGEPDLMTAAKMILHDWQRGKIPFFV--PPPR 453


>Medtr2g079510.1 | nucleolar GTP-binding-like protein | HC |
           chr2:33482137-33476593 | 20130731
          Length = 574

 Score = 79.0 bits (193), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 73/281 (25%), Positives = 126/281 (44%), Gaps = 42/281 (14%)

Query: 111 ELKEQLRLMDVVIEVRDGRIPMSTTHPQMDLWLG----NRKRILVLNREDMISTEDRNAW 166
           EL + +   DVV++V D R P  T    ++  L     ++  +L+LN+ D+I       W
Sbjct: 206 ELYKVIDSSDVVVQVIDARDPQGTRCYHLEKHLKENCKHKHMVLLLNKCDLIPAWATKGW 265

Query: 167 AEYFTRNGTKVVFS---NGQLGMGTM-----KLGRLAKELAANVNVKRRAKGLLPRAVRA 218
               ++    + F    N   G G++     +  RL  +                +A+  
Sbjct: 266 LRVLSKEYPTLAFHASINKSFGKGSLLSVLRQFARLKSD---------------KQAISV 310

Query: 219 GIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRELRWIRFGKDLELLDSPGILPMRISDQ 278
           G VGYPNVGKSS+IN L  + +C  AP PG T+  ++I   K + L+D PG++      +
Sbjct: 311 GFVGYPNVGKSSVINTLRTKNVCKVAPIPGETKVWQYITLTKRIFLIDCPGVVYHNNDSE 370

Query: 279 SSAIKLAICDDIGERSYDVTDVAAVLVQMLTKLPAVGGDALRKRYKIN--VDSQCGKTFV 336
           +  +   +      R  ++ D A  + ++L +   V  + L + YKI   VD       +
Sbjct: 371 TDVVLKGVV-----RVTNLKDAADHIGEVLKR---VKKEHLTRAYKIKEWVDENDFLLQL 422

Query: 337 EKLALQLFNG---DVHQASFRVLSDFRKGKFGWTALERPPR 374
            K + +L  G   D+  A+  +L D+++GK  +     PPR
Sbjct: 423 CKSSGKLLKGGEPDLMTAAKMILHDWQRGKIPF--FVPPPR 461


>Medtr1g048030.1 | guanine nucleotide-binding-like protein | HC |
           chr1:18178595-18172713 | 20130731
          Length = 599

 Score = 76.6 bits (187), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 61/206 (29%), Positives = 94/206 (45%), Gaps = 24/206 (11%)

Query: 120 DVVIEVRDGRIPMSTTHPQMDLWL---GNRKR-ILVLNREDMISTEDRNAWAEYFTRNGT 175
           DV++EV D R P+ T    ++  +   G  KR +L+LN+ D++  E    W +Y      
Sbjct: 144 DVILEVLDARDPLGTRCVNIEKRVRDSGTYKRHVLLLNKIDLVPRESVEKWLKYLREEFP 203

Query: 176 KVVFSNGQLGMGTMKLGRLAKELAANV-----------------NVKRRAKGLLPRAVRA 218
            V F        +  LGR  K   +N                  N  R  K  L  ++  
Sbjct: 204 TVAFKCSTQQQKS-NLGRSKKIKTSNTLQLSDCLGAETLLKLLKNYARSDK--LKTSITV 260

Query: 219 GIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRELRWIRFGKDLELLDSPGILPMRISDQ 278
           G+VG PNVGKSSLIN L++      +   G TR  + IR  K+++LLD PG++ +   + 
Sbjct: 261 GLVGLPNVGKSSLINSLMRSHAVHVSASAGSTRSKQEIRLDKNVKLLDCPGVVMLDSREN 320

Query: 279 SSAIKLAICDDIGERSYDVTDVAAVL 304
            + I L  C  I + +  V+ V  +L
Sbjct: 321 DATIALKNCKRIEKLADPVSPVKEIL 346


>Medtr2g061470.1 | P-loop nucleoside triphosphate hydrolase
           superfamily protein | HC | chr2:26052534-26057259 |
           20130731
          Length = 375

 Score = 70.5 bits (171), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 54/214 (25%), Positives = 91/214 (42%), Gaps = 21/214 (9%)

Query: 92  TKALRPVQWFPGHIAKAEKELKEQLRLMDVVIEVRDGRIPMSTTHPQMDLWLGNRKRILV 151
           +  +R   W    +  + + + E++ L+D+++ V D RIP S+   Q  L   N   I+V
Sbjct: 23  SSVIREGLWNDPFMVASTRAIAERIPLVDLIVHVTDARIPFSS---QCHLLTHN--HIIV 77

Query: 152 LNREDMISTEDRNAWAEYFTRNGTKVVFSNGQLGMGTMKLGRLAKELAANVNVKRRAKGL 211
           LN+ D+ S      W +YF         S G        + +    +   V   RR    
Sbjct: 78  LNKADLASRSSLQVWMDYFRETN---CVSCGVDAHNKESIRQFLSLIQRQVGKLRRTDQA 134

Query: 212 LPRAVRAGIVGYPNVGKSSLINRLL-----------KRRMCPAAPRPGVTRELRWIRFGK 260
                   ++G PNVGKS+L N L            K +    +P PG T+++R  +   
Sbjct: 135 NKYTATVMLIGLPNVGKSALTNALHHVGRISAAEKGKLKHATVSPEPGETKDIRSYKIAS 194

Query: 261 --DLELLDSPGILPMRISDQSSAIKLAICDDIGE 292
             ++ +LD+P +LP  + D     KL +   IG+
Sbjct: 195 HPNIYVLDTPAVLPPEVPDVDVLSKLLLTGAIGD 228