Miyakogusa Predicted Gene

Lj1g3v4433150.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v4433150.1 Non Characterized Hit- tr|B9S429|B9S429_RICCO
Putative uncharacterized protein OS=Ricinus communis
G,35.55,1e-16,coiled-coil,NULL; seg,NULL,CUFF.32344.1
         (303 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr7g094840.1 | hypothetical protein | HC | chr7:37870001-3787...    77   2e-14
Medtr7g094840.2 | hypothetical protein | HC | chr7:37870001-3787...    77   2e-14
Medtr7g094840.3 | hypothetical protein | HC | chr7:37870001-3787...    66   4e-11

>Medtr7g094840.1 | hypothetical protein | HC |
           chr7:37870001-37873231 | 20130731
          Length = 347

 Score = 77.0 bits (188), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 57/139 (41%), Positives = 74/139 (53%), Gaps = 18/139 (12%)

Query: 161 NMSEKNLNEKVDHTLQXXXXXXXXXXXXXXXXXGPSTLSETPSKAINFRDLYISSQKQLE 220
           N+SEK+++ KVD+ LQ                 G + L E PS A+ +R +YI SQK+LE
Sbjct: 226 NVSEKSVDVKVDYALQKIDALYKMIELLTAKVDGNAGLYEAPSMALGYRSMYIDSQKKLE 285

Query: 221 ALAEENRLLTGKLENALGKLEVYEKDIRVPLGVLDKVKDIFDAVAVPKRAKTTEAAVKNS 280
           AL+ EN  L        G+LEVYEK       VLDK+KD+ +   +   AKT EAAV + 
Sbjct: 286 ALSNENEQLK-------GQLEVYEK-------VLDKMKDVVNQ-QLSNVAKTAEAAVISL 330

Query: 281 TPRTHNACSASAPKRKRNE 299
                N   ASA KRKR E
Sbjct: 331 NQEIDN---ASAGKRKRIE 346



 Score = 48.5 bits (114), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 57/161 (35%), Positives = 72/161 (44%), Gaps = 31/161 (19%)

Query: 1   MGRKPGSSKNNSDKTTM----------DKVEDQSIYGKVKSPRA--SEVENLKARCAPLK 48
           MGRKPG   + +    +          ++VE Q+    +       SE+ N     +PLK
Sbjct: 1   MGRKPGPKPSKTKDAVLSLPAANALPSERVEQQASNENINPMEVLESELGNPHPMSSPLK 60

Query: 49  -ILNQSANGVEAPPVKNSASGVEAHPAKISPQEQVNRADEGQKKSA----KKSKTSGVSV 103
             LN S  GVE       A G E       PQEQ     + QKK A    K SK    SV
Sbjct: 61  KHLNSSVAGVET-----GAVGKE-------PQEQTTLVSKHQKKYATLAKKMSKYRNGSV 108

Query: 104 RRSERIKSTVGP--SPASSRAPEYIEDLTASESENDEQDHQ 142
           RRSERI+S V    S  S +  E + D+T S+SE DE D Q
Sbjct: 109 RRSERIRSGVVKVKSTNSKQGVECVVDMTVSDSEKDESDAQ 149


>Medtr7g094840.2 | hypothetical protein | HC |
           chr7:37870001-37873206 | 20130731
          Length = 343

 Score = 77.0 bits (188), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 57/139 (41%), Positives = 74/139 (53%), Gaps = 18/139 (12%)

Query: 161 NMSEKNLNEKVDHTLQXXXXXXXXXXXXXXXXXGPSTLSETPSKAINFRDLYISSQKQLE 220
           N+SEK+++ KVD+ LQ                 G + L E PS A+ +R +YI SQK+LE
Sbjct: 222 NVSEKSVDVKVDYALQKIDALYKMIELLTAKVDGNAGLYEAPSMALGYRSMYIDSQKKLE 281

Query: 221 ALAEENRLLTGKLENALGKLEVYEKDIRVPLGVLDKVKDIFDAVAVPKRAKTTEAAVKNS 280
           AL+ EN  L        G+LEVYEK       VLDK+KD+ +   +   AKT EAAV + 
Sbjct: 282 ALSNENEQLK-------GQLEVYEK-------VLDKMKDVVNQ-QLSNVAKTAEAAVISL 326

Query: 281 TPRTHNACSASAPKRKRNE 299
                N   ASA KRKR E
Sbjct: 327 NQEIDN---ASAGKRKRIE 342


>Medtr7g094840.3 | hypothetical protein | HC |
           chr7:37870001-37873231 | 20130731
          Length = 317

 Score = 66.2 bits (160), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 48/106 (45%), Positives = 60/106 (56%), Gaps = 18/106 (16%)

Query: 194 GPSTLSETPSKAINFRDLYISSQKQLEALAEENRLLTGKLENALGKLEVYEKDIRVPLGV 253
           G + L E PS A+ +R +YI SQK+LEAL+ EN  L        G+LEVYEK       V
Sbjct: 229 GNAGLYEAPSMALGYRSMYIDSQKKLEALSNENEQLK-------GQLEVYEK-------V 274

Query: 254 LDKVKDIFDAVAVPKRAKTTEAAVKNSTPRTHNACSASAPKRKRNE 299
           LDK+KD+ +   +   AKT EAAV +      N   ASA KRKR E
Sbjct: 275 LDKMKDVVNQ-QLSNVAKTAEAAVISLNQEIDN---ASAGKRKRIE 316



 Score = 48.1 bits (113), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 57/161 (35%), Positives = 72/161 (44%), Gaps = 31/161 (19%)

Query: 1   MGRKPGSSKNNSDKTTM----------DKVEDQSIYGKVKSPRA--SEVENLKARCAPLK 48
           MGRKPG   + +    +          ++VE Q+    +       SE+ N     +PLK
Sbjct: 1   MGRKPGPKPSKTKDAVLSLPAANALPSERVEQQASNENINPMEVLESELGNPHPMSSPLK 60

Query: 49  -ILNQSANGVEAPPVKNSASGVEAHPAKISPQEQVNRADEGQKKSA----KKSKTSGVSV 103
             LN S  GVE       A G E       PQEQ     + QKK A    K SK    SV
Sbjct: 61  KHLNSSVAGVET-----GAVGKE-------PQEQTTLVSKHQKKYATLAKKMSKYRNGSV 108

Query: 104 RRSERIKSTVGP--SPASSRAPEYIEDLTASESENDEQDHQ 142
           RRSERI+S V    S  S +  E + D+T S+SE DE D Q
Sbjct: 109 RRSERIRSGVVKVKSTNSKQGVECVVDMTVSDSEKDESDAQ 149