Miyakogusa Predicted Gene

Lj1g3v4431080.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v4431080.1 Non Characterized Hit- tr|I1JNT8|I1JNT8_SOYBN
Uncharacterized protein OS=Glycine max PE=3 SV=1,84.09,0,PROTEIN
TRANSLOCASE SECY SUBUNIT,NULL; SECY/SEC61-ALPHA FAMILY
MEMBER,SecY/SEC61-alpha family; SECYT,CUFF.32337.1
         (563 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr7g094800.1 | preprotein translocase subunit SecY | HC | chr...   896   0.0  
Medtr2g460600.1 | preprotein translocase subunit SecY | HC | chr...   122   9e-28

>Medtr7g094800.1 | preprotein translocase subunit SecY | HC |
           chr7:37833621-37826563 | 20130731
          Length = 547

 Score =  896 bits (2315), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 458/568 (80%), Positives = 484/568 (85%), Gaps = 26/568 (4%)

Query: 1   MEA-ATRFSP-NHFLPHHHTFQTKPNALPRRTPPHRITFHRIGTPRVSLLN-NFPSLNRS 57
           MEA ATRFS   HF  H H FQ KPN +  +T             R+S+   N PSL   
Sbjct: 1   MEATATRFSSFYHF--HPHNFQPKPNTILHKT-------------RISIFTRNSPSL--- 42

Query: 58  LSHRRTLSVNFFDRLRSDSV-EAESPNEEVVLLP-SRGGDGGEAVVPTGDLQLKPRMFRN 115
              +R +SVNF DRLR++     ++P     L+P +RGGDG   V   G L+ KPRMF+N
Sbjct: 43  ---QRRISVNFSDRLRTNHTPHIQTPILSEQLVPETRGGDGEAIVASPGTLEFKPRMFKN 99

Query: 116 RFLNFVRFGSVINGAAESFFKSEIRRRLFVTAVLIVISRVGYFIPLPGFDRRLIPQDYMS 175
           RFLNFVRFGSVINGAAE+FFKSEIRRRLFVTAVLIVISRVGYFIPLPGFDRRLIP+DYMS
Sbjct: 100 RFLNFVRFGSVINGAAETFFKSEIRRRLFVTAVLIVISRVGYFIPLPGFDRRLIPKDYMS 159

Query: 176 FVSGSSVDELGDFSSELKLSLFQLGISPQIIASIIMQVLCHVVPSLVKLRKEGLDGQEKI 235
           FVSGSSVDELGDFSSELKLSLFQLG SPQIIASIIMQV CHVVPSLVKLRKEGLDG EKI
Sbjct: 160 FVSGSSVDELGDFSSELKLSLFQLGNSPQIIASIIMQVFCHVVPSLVKLRKEGLDGHEKI 219

Query: 236 KSYIWWMSFGFAILEALIVSCYSLQYSIYAASHRVKHVMVTSSLLVCGAMTTTWICDTIS 295
           KSYIWWMS GFAI+EALIVSCYSL YSIYAAS+R KHVMVT+ LLVCGAMT TWICDTIS
Sbjct: 220 KSYIWWMSLGFAIMEALIVSCYSLPYSIYAASYRFKHVMVTTLLLVCGAMTITWICDTIS 279

Query: 296 ESGFGQGSSLIICVGILTGYMETLHKMLTQLSVSSVSWLPYVLAVLGIFTTVTMWAVVVT 355
           ESGFGQGSSL ICVGIL GYM+TLHKM+TQLSVS+VSW PYVLAVLG+FT VTMWAVVVT
Sbjct: 280 ESGFGQGSSLFICVGILIGYMDTLHKMVTQLSVSAVSWWPYVLAVLGLFTIVTMWAVVVT 339

Query: 356 EGCRKVKLQYYGFKLASAAREQSPITEVEPYIPFNINPAGMQPVLTTSYLLAFPSIVAGL 415
           EGCRKVKLQYYGFKLASAAREQSPITEVEPYIPFNINPAGMQPVLTTSYLLAFPSIVAGL
Sbjct: 340 EGCRKVKLQYYGFKLASAAREQSPITEVEPYIPFNINPAGMQPVLTTSYLLAFPSIVAGL 399

Query: 416 LQSPFWEHVKEMLNPETSIGAEPWVYYSIYAFFVFLFNIFDIANLPKEIADYLNKMGARI 475
           L SPFWEHVKEMLNP+TS+GAEPWVYYSIYAFFVFLFNIFDIANLPKEIADYLNKMGARI
Sbjct: 400 LGSPFWEHVKEMLNPDTSVGAEPWVYYSIYAFFVFLFNIFDIANLPKEIADYLNKMGARI 459

Query: 476 PNIKPGKATIEYLSKVQASTRFWGGXXXXXXXXXXXXXDHYLRRINAGFAIGFTSVLIIV 535
           PNIKPGKATIEYLSKVQASTRFWGG             DHYLRR NAGFAIGFTSVLIIV
Sbjct: 460 PNIKPGKATIEYLSKVQASTRFWGGLLLSVLATTSSVLDHYLRRTNAGFAIGFTSVLIIV 519

Query: 536 GSIIELRRSYQAYNVMPSLSNALRRYGV 563
           GSIIELRRSYQAYNVMP LSNAL+RYGV
Sbjct: 520 GSIIELRRSYQAYNVMPGLSNALKRYGV 547


>Medtr2g460600.1 | preprotein translocase subunit SecY | HC |
           chr2:24985197-24980945 | 20130731
          Length = 546

 Score =  122 bits (306), Expect = 9e-28,   Method: Compositional matrix adjust.
 Identities = 109/420 (25%), Positives = 191/420 (45%), Gaps = 25/420 (5%)

Query: 133 SFFKSEIRRRLFVTAVLIVISRVGYFIPLPGFDRRLIPQDYMSFVSGSSVDELGDFSSEL 192
            FFK  +  +       + +SR+G +IPL G +R     +       S +  L  FS   
Sbjct: 129 DFFKGPLPGKFLKLLGFLALSRLGVYIPLGGVNREAFLGN---LDQNSLLSTLDSFSGGG 185

Query: 193 --KLSLFQLGISPQIIASIIMQVLCHVVPSLVKLRK-EGLDGQEKIKSYIWWMSFGFAIL 249
             +L +  LGI P I A I+ Q+L  V P L  L+K EG  G++KI  Y  + S GFAI+
Sbjct: 186 IGRLGICSLGIVPFINAQIVFQLLAQVYPKLQDLQKREGEAGRKKILQYTRYASVGFAIV 245

Query: 250 EALIVSCYSLQYSIYAASHRVKHVMVTSSLLVCGAMTTTWICDTISESGFGQGSSLIICV 309
           +A+      L    Y      +  + +  LL  G++ TT+I + I++   G G+SL+I  
Sbjct: 246 QAI---GQVLFLRPYVNDFTTEWALTSVILLTLGSVITTYIGEQITDLKLGNGTSLLIFT 302

Query: 310 GILTGYMETLHKMLTQLSVSSVSWLPYVLAVLGIFTTVTMWAVVVTEGCRKVKLQYYGFK 369
            I++    +  +   Q + +  +++  V  ++  F  V +  V V E  RK+ + Y    
Sbjct: 303 NIISYLPASFGRTFAQ-AFNDANYVGLVTIIVSFFLLV-VGIVYVQEAERKIPINY---- 356

Query: 370 LASAAREQSPITEVEPYIPFNINPAGMQPVLTTSYLLAFPSIVAGLLQSPFWEHVKEMLN 429
            AS    +S   E   Y+PF +N +G+ P++ ++  LA P  +A        ++    LN
Sbjct: 357 -ASRFTSKSGGLEKSAYLPFKVNSSGVMPIIFSTSSLALPGTLARFTGLSALKNAAVALN 415

Query: 430 PETSIGAEPWVYYSIY--AFFVFLFNIFDIANLPKEIADYLNKMGARIPNIKPGKATIEY 487
           P    G   ++ ++I   AFF + +    +   P ++++ L + GA IP ++PG++T  +
Sbjct: 416 P----GGSFYLPFNILLIAFFNYYYTFLQLD--PDDVSEQLKRQGASIPLVRPGRSTATF 469

Query: 488 LSKVQASTRFWGGXXXXXXXXXXXXXDHYLRRINAGFAIGFTSVLIIVGSIIELRRSYQA 547
           +  V +     G              +     + A      TS+LI+VG   +  R  +A
Sbjct: 470 IKTVLSRISVLGSTFLAILAAGPAIVEQ-TAHLTAFRGFAGTSILILVGCATDTARKVRA 528