Miyakogusa Predicted Gene
- Lj1g3v4419940.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj1g3v4419940.1 tr|A9TAZ3|A9TAZ3_PHYPA Predicted protein
OS=Physcomitrella patens subsp. patens
GN=PHYPADRAFT_142792,44.29,3e-19,seg,NULL; UNCHARACTERIZED,NULL;
ANCIENT CONSERVED DOMAIN
PROTEIN-RELATED,NULL,NODE_35927_length_843_cov_30.507711.path2.1
(162 letters)
Database: Medicago_aa4.0v1
62,319 sequences; 21,947,249 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Medtr7g094620.1 | DUF21 domain plant protein | HC | chr7:3772156... 152 1e-37
Medtr4g117360.1 | DUF21 domain plant protein | HC | chr4:4866695... 117 6e-27
Medtr6g045467.6 | DUF21 domain plant protein | HC | chr6:1638763... 116 9e-27
Medtr6g045467.3 | DUF21 domain plant protein | HC | chr6:1638763... 116 1e-26
Medtr6g045467.4 | DUF21 domain plant protein | HC | chr6:1638763... 116 1e-26
Medtr6g045467.2 | DUF21 domain plant protein | HC | chr6:1638763... 115 1e-26
Medtr6g045467.1 | DUF21 domain plant protein | HC | chr6:1638763... 115 1e-26
Medtr7g010900.1 | DUF21 domain plant protein | HC | chr7:2792470... 106 9e-24
Medtr6g045467.5 | DUF21 domain plant protein | HC | chr6:1638763... 87 5e-18
Medtr3g111830.1 | CBS domain protein | HC | chr3:52324915-523197... 82 2e-16
Medtr6g052300.1 | CBS domain protein | HC | chr6:18250241-182568... 73 1e-13
Medtr4g092610.1 | CBS domain protein | HC | chr4:36721936-367273... 70 1e-12
Medtr2g010520.1 | magnesium and cobalt efflux protein CorC, puta... 57 7e-09
Medtr6g051840.1 | DUF21 domain plant protein, putative | HC | ch... 47 9e-06
>Medtr7g094620.1 | DUF21 domain plant protein | HC |
chr7:37721563-37716843 | 20130731
Length = 478
Score = 152 bits (384), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 91/165 (55%), Positives = 106/165 (64%), Gaps = 12/165 (7%)
Query: 1 MPLYDILNEFQKGSSHMAAVVKVARESKNPQEACYMGKSKNEKFTKHSSKLTVPLLARSS 60
MPLY+ILNEFQKG+SHMA VVKV RE N QEA SK+E KH S+LTVPLLA +
Sbjct: 308 MPLYNILNEFQKGNSHMAVVVKVIREKNNLQEAGDFNNSKDEVGIKHRSQLTVPLLAGTY 367
Query: 61 EKSDNVADIGKAPPNH---------DADKQCQKNSTATNGDHRFHDYDEDGEVIGIITLE 111
EK DNV +I K +H +AD+QC+++ T+ N H F YD+DGEVIGIITLE
Sbjct: 368 EKPDNVINIDKLSRHHNPRGYNDPNNADEQCEESDTSPNSVHDF-PYDKDGEVIGIITLE 426
Query: 112 DVFEELLQEEIVDETDEYIDVHXXXXXXXXXXXXXXXXXPLVQKL 156
DVFEELLQEEI DETD IDVH PL QK+
Sbjct: 427 DVFEELLQEEIWDETD--IDVHRRIRVAAVAAASSVARVPLGQKV 469
>Medtr4g117360.1 | DUF21 domain plant protein | HC |
chr4:48666950-48672872 | 20130731
Length = 492
Score = 117 bits (292), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 74/136 (54%), Positives = 86/136 (63%), Gaps = 6/136 (4%)
Query: 1 MPLYDILNEFQKGSSHMAAVVKVARESKNPQEACYMGKSKNEKFTKHSSKLTVPLLARSS 60
MPLYDILNEFQKGSSHMAAVVK + K + K +K S+LT PLL +
Sbjct: 308 MPLYDILNEFQKGSSHMAAVVKAKGKGKETPQIIDEEKFDAKKSAGGESQLTTPLLQKQD 367
Query: 61 EKSDNVA-DIGKAPPNHDADKQ--CQKNSTATNGDHRFHDYDEDGEVIGIITLEDVFEEL 117
KS+NV DI + +KQ Q++ N + EDGEVIGIITLEDVFEEL
Sbjct: 368 VKSENVVVDIDEPSKLPIINKQTGLQRSDGMLNTPS---ENFEDGEVIGIITLEDVFEEL 424
Query: 118 LQEEIVDETDEYIDVH 133
LQEEIVDETDEY+DVH
Sbjct: 425 LQEEIVDETDEYVDVH 440
>Medtr6g045467.6 | DUF21 domain plant protein | HC |
chr6:16387634-16392911 | 20130731
Length = 366
Score = 116 bits (290), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 71/133 (53%), Positives = 80/133 (60%), Gaps = 16/133 (12%)
Query: 1 MPLYDILNEFQKGSSHMAAVVKVARESKNPQEACYMGKSKNEKFTKHSSKLTVPLLARSS 60
MPLYDILNEFQKGSSHMAAVVK + K + K +K S+LT PLL
Sbjct: 202 MPLYDILNEFQKGSSHMAAVVKTRGKGKETPQLIDEEKFDAKKSVGGDSQLTTPLLQELD 261
Query: 61 EKSDNVADIGKAPPNHDADKQCQKNSTATNGDHRFHDYDEDGEVIGIITLEDVFEELLQE 120
KS+NV D DK + S + + DGEVIGIITLEDVFEELLQE
Sbjct: 262 SKSENVV--------VDIDKPSKLTSAPSE--------NIDGEVIGIITLEDVFEELLQE 305
Query: 121 EIVDETDEYIDVH 133
EIVDETDEY+DVH
Sbjct: 306 EIVDETDEYVDVH 318
>Medtr6g045467.3 | DUF21 domain plant protein | HC |
chr6:16387634-16392933 | 20130731
Length = 363
Score = 116 bits (290), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 71/133 (53%), Positives = 80/133 (60%), Gaps = 16/133 (12%)
Query: 1 MPLYDILNEFQKGSSHMAAVVKVARESKNPQEACYMGKSKNEKFTKHSSKLTVPLLARSS 60
MPLYDILNEFQKGSSHMAAVVK + K + K +K S+LT PLL
Sbjct: 205 MPLYDILNEFQKGSSHMAAVVKTRGKGKETPQLIDEEKFDAKKSVGGDSQLTTPLLQELD 264
Query: 61 EKSDNVADIGKAPPNHDADKQCQKNSTATNGDHRFHDYDEDGEVIGIITLEDVFEELLQE 120
KS+NV D DK + S + + DGEVIGIITLEDVFEELLQE
Sbjct: 265 SKSENVV--------VDIDKPSKLTSAPSE--------NIDGEVIGIITLEDVFEELLQE 308
Query: 121 EIVDETDEYIDVH 133
EIVDETDEY+DVH
Sbjct: 309 EIVDETDEYVDVH 321
>Medtr6g045467.4 | DUF21 domain plant protein | HC |
chr6:16387634-16392911 | 20130731
Length = 369
Score = 116 bits (290), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 71/133 (53%), Positives = 80/133 (60%), Gaps = 16/133 (12%)
Query: 1 MPLYDILNEFQKGSSHMAAVVKVARESKNPQEACYMGKSKNEKFTKHSSKLTVPLLARSS 60
MPLYDILNEFQKGSSHMAAVVK + K + K +K S+LT PLL
Sbjct: 205 MPLYDILNEFQKGSSHMAAVVKTRGKGKETPQLIDEEKFDAKKSVGGDSQLTTPLLQELD 264
Query: 61 EKSDNVADIGKAPPNHDADKQCQKNSTATNGDHRFHDYDEDGEVIGIITLEDVFEELLQE 120
KS+NV D DK + S + + DGEVIGIITLEDVFEELLQE
Sbjct: 265 SKSENVV--------VDIDKPSKLTSAPSE--------NIDGEVIGIITLEDVFEELLQE 308
Query: 121 EIVDETDEYIDVH 133
EIVDETDEY+DVH
Sbjct: 309 EIVDETDEYVDVH 321
>Medtr6g045467.2 | DUF21 domain plant protein | HC |
chr6:16387634-16392933 | 20130731
Length = 462
Score = 115 bits (289), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 71/133 (53%), Positives = 80/133 (60%), Gaps = 16/133 (12%)
Query: 1 MPLYDILNEFQKGSSHMAAVVKVARESKNPQEACYMGKSKNEKFTKHSSKLTVPLLARSS 60
MPLYDILNEFQKGSSHMAAVVK + K + K +K S+LT PLL
Sbjct: 304 MPLYDILNEFQKGSSHMAAVVKTRGKGKETPQLIDEEKFDAKKSVGGDSQLTTPLLQELD 363
Query: 61 EKSDNVADIGKAPPNHDADKQCQKNSTATNGDHRFHDYDEDGEVIGIITLEDVFEELLQE 120
KS+NV D DK + S + + DGEVIGIITLEDVFEELLQE
Sbjct: 364 SKSENVV--------VDIDKPSKLTSAPSE--------NIDGEVIGIITLEDVFEELLQE 407
Query: 121 EIVDETDEYIDVH 133
EIVDETDEY+DVH
Sbjct: 408 EIVDETDEYVDVH 420
>Medtr6g045467.1 | DUF21 domain plant protein | HC |
chr6:16387634-16392931 | 20130731
Length = 468
Score = 115 bits (289), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 71/133 (53%), Positives = 80/133 (60%), Gaps = 16/133 (12%)
Query: 1 MPLYDILNEFQKGSSHMAAVVKVARESKNPQEACYMGKSKNEKFTKHSSKLTVPLLARSS 60
MPLYDILNEFQKGSSHMAAVVK + K + K +K S+LT PLL
Sbjct: 304 MPLYDILNEFQKGSSHMAAVVKTRGKGKETPQLIDEEKFDAKKSVGGDSQLTTPLLQELD 363
Query: 61 EKSDNVADIGKAPPNHDADKQCQKNSTATNGDHRFHDYDEDGEVIGIITLEDVFEELLQE 120
KS+NV D DK + S + + DGEVIGIITLEDVFEELLQE
Sbjct: 364 SKSENVV--------VDIDKPSKLTSAPSE--------NIDGEVIGIITLEDVFEELLQE 407
Query: 121 EIVDETDEYIDVH 133
EIVDETDEY+DVH
Sbjct: 408 EIVDETDEYVDVH 420
>Medtr7g010900.1 | DUF21 domain plant protein | HC |
chr7:2792470-2796635 | 20130731
Length = 494
Score = 106 bits (265), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 67/136 (49%), Positives = 81/136 (59%), Gaps = 11/136 (8%)
Query: 1 MPLYDILNEFQKGSSHMAAVVKVARESKNPQEACYMGKSKNEKFTKHSSKLTVPLLARSS 60
MPLY+ILN+FQKGSSHMAAV+K + K E K +K S++T PLL +
Sbjct: 308 MPLYEILNQFQKGSSHMAAVIKTKGKGKETLEIIDEEKFDAKKSVGGDSQITTPLLEKMY 367
Query: 61 EKSDNVA-DIGKAP--PNHDADKQCQKNSTATNGDHRFHDYDEDGEVIGIITLEDVFEEL 117
KS NV DI P+ D Q N+ + N +H EVIGIITLEDV EEL
Sbjct: 368 AKSKNVVIDIDNPSNLPSIDEQTGSQLNAPSENVEH--------AEVIGIITLEDVLEEL 419
Query: 118 LQEEIVDETDEYIDVH 133
LQ EIVDETDE++DVH
Sbjct: 420 LQVEIVDETDEFVDVH 435
>Medtr6g045467.5 | DUF21 domain plant protein | HC |
chr6:16387634-16392933 | 20130731
Length = 423
Score = 87.4 bits (215), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 58/119 (48%), Positives = 66/119 (55%), Gaps = 16/119 (13%)
Query: 1 MPLYDILNEFQKGSSHMAAVVKVARESKNPQEACYMGKSKNEKFTKHSSKLTVPLLARSS 60
MPLYDILNEFQKGSSHMAAVVK + K + K +K S+LT PLL
Sbjct: 304 MPLYDILNEFQKGSSHMAAVVKTRGKGKETPQLIDEEKFDAKKSVGGDSQLTTPLLQELD 363
Query: 61 EKSDNVADIGKAPPNHDADKQCQKNSTATNGDHRFHDYDEDGEVIGIITLEDVFEELLQ 119
KS+NV D DK + S + + DGEVIGIITLEDVFEELLQ
Sbjct: 364 SKSENVV--------VDIDKPSKLTSAPSE--------NIDGEVIGIITLEDVFEELLQ 406
>Medtr3g111830.1 | CBS domain protein | HC | chr3:52324915-52319771
| 20130731
Length = 492
Score = 82.0 bits (201), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 53/148 (35%), Positives = 82/148 (55%), Gaps = 17/148 (11%)
Query: 1 MPLYDILNEFQKGSSHMAAVVK-------VARESKNPQEACYMGKSKNEKFTKHSSKLTV 53
MPLYDILNEFQKG SH+A V + ++++ KN ++ + +N+ + K TV
Sbjct: 286 MPLYDILNEFQKGHSHIAVVYRDLNDKKEISKKIKNEEQLEFKDSCRNKGKSAPLDKGTV 345
Query: 54 PLL-----ARSSEKSDNVADIGKAPPNHDADKQCQKNSTATNGD---HRFHDYDEDGEVI 105
L + K+D + K+PP A K+ + + D + + V+
Sbjct: 346 --LDSHDTVTAGSKTDGGPQVKKSPPATPAFKKRHRGCSYCILDLDNAPLPVFPPNEVVV 403
Query: 106 GIITLEDVFEELLQEEIVDETDEYIDVH 133
G+I++EDV EELLQEEI+DETDEY+++H
Sbjct: 404 GVISMEDVIEELLQEEILDETDEYVNIH 431
>Medtr6g052300.1 | CBS domain protein | HC | chr6:18250241-18256861
| 20130731
Length = 476
Score = 73.2 bits (178), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 54/148 (36%), Positives = 71/148 (47%), Gaps = 31/148 (20%)
Query: 2 PLYDILNEFQKGSSHMAAVVKVARESKNPQEACYMGKSKNEKFTKHSSKLTVPLL----A 57
PLYDILN+F+KG SHMA V+K +E + E F P L
Sbjct: 293 PLYDILNQFKKGQSHMAVVLK-------SKENIRTAATNTEGFG--------PFLPHDYI 337
Query: 58 RSSEKSDNVADIGKAPPNHDADKQCQKNSTATNGDHRFHDYDE------------DGEVI 105
S ++ N G + + S ++ HR +D + EV+
Sbjct: 338 SISTEASNWQSEGSEYYSATLKNAMLQESKDSDPLHRSKQHDTSISLENMESLLGEEEVV 397
Query: 106 GIITLEDVFEELLQEEIVDETDEYIDVH 133
GIITLEDV EELLQE+I+DETD+YIDVH
Sbjct: 398 GIITLEDVMEELLQEDILDETDQYIDVH 425
>Medtr4g092610.1 | CBS domain protein | HC | chr4:36721936-36727374
| 20130731
Length = 425
Score = 69.7 bits (169), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 51/140 (36%), Positives = 70/140 (50%), Gaps = 11/140 (7%)
Query: 1 MPLYDILNEFQKGSSHMAAVVKVARESKNPQEACYMGKSKNE---------KFTKHSSKL 51
MPLYDILNEFQKG SHMA VV+ ++K P S E + K
Sbjct: 286 MPLYDILNEFQKGHSHMAVVVRQCDKTKQPSSKNDSNDSVKEVKVDIDGEKPLQEKVLKP 345
Query: 52 TVPLLARSSEKSDNVADIGKAPPNHDADKQCQKNSTATNGDHRFHDYDEDGEVIGIITLE 111
+P+ S + N ++ G + + K + +G + E+ E +GIIT+E
Sbjct: 346 KIPIQKWKSFPNTNKSNRGGSR-SRKWSKNMYSDILEIDGSP-LPNIPEEEEAVGIITME 403
Query: 112 DVFEELLQEEIVDETDEYID 131
DV EELLQEEI DETD + +
Sbjct: 404 DVIEELLQEEIFDETDHHFE 423
>Medtr2g010520.1 | magnesium and cobalt efflux protein CorC,
putative | HC | chr2:2426201-2422876 | 20130731
Length = 429
Score = 57.0 bits (136), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 47/143 (32%), Positives = 70/143 (48%), Gaps = 13/143 (9%)
Query: 1 MPLYDILNEFQKGSSHMAAVV----KVARESKNPQ--------EACYMGKSKNEKFTKHS 48
+PLYDILNEFQKG SHMA VV K ++S N G+ N +
Sbjct: 286 IPLYDILNEFQKGHSHMAVVVRHFDKTGQQSSNNNCTDSVRDVRVTIDGEKNNPQEKVLK 345
Query: 49 SKLTVPLLARSSEKSDNVADIGKAPPNHDADKQCQKNSTATNGDHRFHDYDEDGEVIGII 108
+K+ + S +++ ++ + + + + +G+ E E +GII
Sbjct: 346 NKMQLHKKKSSPNSNNSNSNSSASSRSKKWSQNIYSDILEIDGN-SIPKLPEKEEAVGII 404
Query: 109 TLEDVFEELLQEEIVDETDEYID 131
T+EDV EELLQEEI DETD + +
Sbjct: 405 TMEDVIEELLQEEIFDETDHHFE 427
>Medtr6g051840.1 | DUF21 domain plant protein, putative | HC |
chr6:18050464-18049156 | 20130731
Length = 135
Score = 46.6 bits (109), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 22/31 (70%), Positives = 26/31 (83%)
Query: 103 EVIGIITLEDVFEELLQEEIVDETDEYIDVH 133
E IGIIT+EDV EELLQ +I+DETDEY+ V
Sbjct: 78 EAIGIITMEDVMEELLQGDILDETDEYVHVQ 108