Miyakogusa Predicted Gene

Lj1g3v4372200.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v4372200.1 Non Characterized Hit- tr|I0Z7C8|I0Z7C8_9CHLO
Uncharacterized protein OS=Coccomyxa subellipsoidea
C-,31.67,3e-17,seg,NULL,CUFF.32330.1
         (489 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr1g054355.1 | hypothetical protein | HC | chr1:23423188-2343...   742   0.0  
Medtr7g093630.1 | hypothetical protein | HC | chr7:37221163-3722...   721   0.0  

>Medtr1g054355.1 | hypothetical protein | HC |
           chr1:23423188-23430285 | 20130731
          Length = 1242

 Score =  742 bits (1915), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 356/464 (76%), Positives = 377/464 (81%), Gaps = 8/464 (1%)

Query: 3   MPGLATSPSSCSLSANGFWAKN-SDYVSYNQLEKFWSELPPQARQELLRIDKQSLFEQAR 61
           MPGL          +NGFW+KN  D V YNQL KFWSEL PQARQELLRIDKQ LFEQAR
Sbjct: 1   MPGLPQF-------SNGFWSKNRDDVVGYNQLHKFWSELSPQARQELLRIDKQMLFEQAR 53

Query: 62  KNMYCSRCNGLLLEGFLQIVMYGKSLQQEGVGSHSPCNAPXXXXXXXXXXXXIMKGCEDG 121
           KNMYCSRCNGLLLEGFLQIVMYGKSLQ EG G   PC  P               G  + 
Sbjct: 54  KNMYCSRCNGLLLEGFLQIVMYGKSLQPEGAGVQFPCGRPGGFKNQNNGGSSTSNGVRNE 113

Query: 122 VQDPSAHPWGGLTIARDGSLTLVNCYLFSKSLKGLQIVFDGXXXXXXXXXLLYPDACGGA 181
           +QDPS HPWGGLT  R+GSLTL++CYL+SKSLKGLQIVFDG         LLYPDACGG 
Sbjct: 114 IQDPSVHPWGGLTTTREGSLTLMDCYLYSKSLKGLQIVFDGARARERERELLYPDACGGG 173

Query: 182 GRGWISQGIVSYGRGHGTRESCALHTARLSCDTLVDFWSALGEETRLSLLRMKEEDFIER 241
           GRGWISQGIVSYGRGHGTRE+CALHTARLSCDTLVDFWSALGEETR SLLRMKEEDFIER
Sbjct: 174 GRGWISQGIVSYGRGHGTRETCALHTARLSCDTLVDFWSALGEETRQSLLRMKEEDFIER 233

Query: 242 LMYRFDSKRFCRDCRRNVIREFKELKELKRMRREPRCSSWFCVADSAFQYEVSDDSIQAD 301
           LMYRFDSKRFCRDCRRNVIREFKELKELKRMRREPRC+SWFCVAD+AFQYEVSDDSIQAD
Sbjct: 234 LMYRFDSKRFCRDCRRNVIREFKELKELKRMRREPRCTSWFCVADTAFQYEVSDDSIQAD 293

Query: 302 WRQTFADTSGVYHHFEWAVGTSEGKADILEFENVGLNGCVKASGLDLGDLNACFITLRAW 361
           WRQTFADT G+YHHFEWAVGT+EGK+DILEFENVG NGCV+ SGLDLG L+ACFITLRAW
Sbjct: 294 WRQTFADTVGLYHHFEWAVGTNEGKSDILEFENVGTNGCVQVSGLDLGGLSACFITLRAW 353

Query: 362 RLDGRCSELCVKAHSLKGQQCVHCRLIVGDGYVTITKGESISRFFXXXXXXXXXXXXXXX 421
           +LDGRC+E CVKAH+LKGQ+CVHCRLIVGDGYVTITKGESI RFF               
Sbjct: 354 KLDGRCTEFCVKAHALKGQECVHCRLIVGDGYVTITKGESIKRFFEHAEEAEEEEDDDLM 413

Query: 422 XXXXXXIDGECTRPQKHAKSPELAREFLLDAATVIFKEQASLAL 465
                 +DGECTRPQKHAKSPELAREFLLDAATVIFKEQ   A 
Sbjct: 414 DKDGNELDGECTRPQKHAKSPELAREFLLDAATVIFKEQVEKAF 457


>Medtr7g093630.1 | hypothetical protein | HC |
           chr7:37221163-37228485 | 20130731
          Length = 1261

 Score =  721 bits (1861), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 350/465 (75%), Positives = 374/465 (80%), Gaps = 2/465 (0%)

Query: 3   MPGLATSPSSCS--LSANGFWAKNSDYVSYNQLEKFWSELPPQARQELLRIDKQSLFEQA 60
           MP +A      +  +S N FW+ N   VS+NQL+KFWSEL  QARQELLRIDKQS FEQA
Sbjct: 1   MPSVANRNEQFTNLMSVNQFWSNNCGDVSFNQLQKFWSELSLQARQELLRIDKQSFFEQA 60

Query: 61  RKNMYCSRCNGLLLEGFLQIVMYGKSLQQEGVGSHSPCNAPXXXXXXXXXXXXIMKGCED 120
           RKNMYCSRCNGLLL+GFLQIVMYGKSLQQ  V +  P N              I KGC+D
Sbjct: 61  RKNMYCSRCNGLLLDGFLQIVMYGKSLQQGVVVAQFPGNTLRGLKKQNNGGSSITKGCQD 120

Query: 121 GVQDPSAHPWGGLTIARDGSLTLVNCYLFSKSLKGLQIVFDGXXXXXXXXXLLYPDACGG 180
            +QDP+  PWGGLT  R+GSLTL+NCYL SKSLKGLQIVFDG         LLYPDACGG
Sbjct: 121 EIQDPTGLPWGGLTTTREGSLTLMNCYLHSKSLKGLQIVFDGARDRERERELLYPDACGG 180

Query: 181 AGRGWISQGIVSYGRGHGTRESCALHTARLSCDTLVDFWSALGEETRLSLLRMKEEDFIE 240
           +GRGWISQGIVSYGRGHGTRE+CALHTARLSCDTLVDFWSALGEETR SLLRMKEEDFIE
Sbjct: 181 SGRGWISQGIVSYGRGHGTRETCALHTARLSCDTLVDFWSALGEETRFSLLRMKEEDFIE 240

Query: 241 RLMYRFDSKRFCRDCRRNVIREFKELKELKRMRREPRCSSWFCVADSAFQYEVSDDSIQA 300
           RLM+RFDSKRFCRDCRRNVIREFKELKELKRMRREPRCSSWFCVADSAFQYEVSDDS+QA
Sbjct: 241 RLMHRFDSKRFCRDCRRNVIREFKELKELKRMRREPRCSSWFCVADSAFQYEVSDDSVQA 300

Query: 301 DWRQTFADTSGVYHHFEWAVGTSEGKADILEFENVGLNGCVKASGLDLGDLNACFITLRA 360
           DWRQTF D  G YHHFEWAVGTSEGK+DILEF++VGLNGC KA  LDL  L+ACFITLRA
Sbjct: 301 DWRQTFPDALGTYHHFEWAVGTSEGKSDILEFKSVGLNGCAKAGNLDLDGLSACFITLRA 360

Query: 361 WRLDGRCSELCVKAHSLKGQQCVHCRLIVGDGYVTITKGESISRFFXXXXXXXXXXXXXX 420
           WRLDGRC+ELCVKAHSLKGQQCVHCRLIVGDGYV ITKGESI RFF              
Sbjct: 361 WRLDGRCTELCVKAHSLKGQQCVHCRLIVGDGYVRITKGESIRRFFEHAEEAEEDEDDDS 420

Query: 421 XXXXXXXIDGECTRPQKHAKSPELAREFLLDAATVIFKEQASLAL 465
                  +DGEC+RPQKHAKSPELAREFLLDAATVIFKEQ   A 
Sbjct: 421 VDKDGNELDGECSRPQKHAKSPELAREFLLDAATVIFKEQVEKAF 465