Miyakogusa Predicted Gene

Lj1g3v4327760.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v4327760.1 tr|Q9SL28|Q9SL28_ARATH Cysteine/histidine-rich C1
domain-containing protein OS=Arabidopsis thaliana
,32.24,3e-18,NUCLEOREDOXIN,NULL; THIOREDOXIN,NULL; Cysteine-rich
domain,NULL; PHD zinc finger,Zinc finger, PHD-ty,CUFF.32266.1
         (418 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr7g093330.1 | cysteine/histidine-rich C1 domain protein | LC...   337   1e-92
Medtr3g034110.1 | hypothetical protein | LC | chr3:11003159-1100...    69   7e-12
Medtr1g034960.1 | cysteine/histidine-rich C1 domain protein | HC...    52   1e-06

>Medtr7g093330.1 | cysteine/histidine-rich C1 domain protein | LC |
           chr7:37082348-37083768 | 20130731
          Length = 408

 Score =  337 bits (865), Expect = 1e-92,   Method: Compositional matrix adjust.
 Identities = 207/438 (47%), Positives = 252/438 (57%), Gaps = 52/438 (11%)

Query: 1   MASAQKNQSSVSHFSHPHPLEHXXXXXXXXXXXXCSGCKLRVT-TNDNDYYRCSKTKTCN 59
           M  + + +S VSHFSHPH LE             C GC LR+T  +D DYY     KTC 
Sbjct: 1   MELSTQKESLVSHFSHPHLLERTTTPSTTNIK--CFGCNLRITHEHDEDYYY--MCKTCP 56

Query: 60  FSLHSVCYNMPFITNHPSHPTHDXXXXXXXXXXXXXNT---CFACKNHATGLTYHCAECT 116
           F LH+VCY  P ITNHPSHP HD              T   C ACK    G  YHCAEC 
Sbjct: 57  FYLHNVCYKTPLITNHPSHPNHDLFLLAIPSSSHATKTTFNCMACKKQCIGFCYHCAECN 116

Query: 117 IFFHXXXXXXXXXXAIKHHPHKIKLEFLPPYDFYCDFC--NKPSFSGWLYRCSMCEFDIH 174
           IFF           ++ HHPHKIKLEF PPYDF+CD C  NKPS+ GWLYRC++CEFDIH
Sbjct: 117 IFFDSLCITLPLSISVTHHPHKIKLEFSPPYDFFCDLCNNNKPSYKGWLYRCNICEFDIH 176

Query: 175 IACAVDNLEHHMD-------NYKIMRLVAEQVGGGISRTQFDNGITGAWDKKFYNQRKNR 227
           IACAV N+E H+        NYK+M LVA+++GGGI   + D+ ++G W+KK ++  K  
Sbjct: 177 IACAVKNIEPHLLREKGCDYNYKMMNLVAQKIGGGI---RIDSAVSG-WNKKLFSPLKKH 232

Query: 228 NMSSGNIMKVVELELQETEQSSVFQETEESPVFALANFEEKTPLRDKLVPLSDFASPPTP 287
           + S+G  M ++ELELQETE  S                E  TPLRDK+ PLSD  SPP P
Sbjct: 233 SSSNGKTM-ILELELQETEHVSS------------EILEGITPLRDKMTPLSDDTSPP-P 278

Query: 288 SQSNQFGESYFSIDLTKSYSNSTYDHRSQVPKEGTEFVVPESIV-------ERAEESYDV 340
           S S+QF +SYFSIDL KSYS + +D RS + KE     +  S+V       E  EE   V
Sbjct: 279 S-SHQFSDSYFSIDLNKSYS-TNHDLRSHIRKEVNSDYINRSVVSSNSGQGEEEEERIGV 336

Query: 341 VK-WSSNSSCNSHQHLNKLHEAFFKGGLVSDYGESRHMEVMKNSKESLAKWSHEDHIITK 399
           V  W  N     H H +K + AFFKGG  SD+ ESR   V+KNSKE  AKW  +D   + 
Sbjct: 337 VNYWLKN-----HPHKDKANAAFFKGG--SDFEESRTNVVVKNSKERSAKWHVKDQTTST 389

Query: 400 PESERCSRSCWRKFLTCC 417
            ESE+ + S WRK LTCC
Sbjct: 390 VESEKANSSGWRKLLTCC 407


>Medtr3g034110.1 | hypothetical protein | LC |
           chr3:11003159-11002178 | 20130731
          Length = 228

 Score = 69.3 bits (168), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 72/248 (29%), Positives = 105/248 (42%), Gaps = 71/248 (28%)

Query: 166 CSMCEFDIHIAC----AVDNLEHHMD-----NYKIMRLVAEQVGGGISRTQFDNGITGAW 216
           C  C F +   C     V+NLE H+      +YK M   A+++GGGI     D+ ++G W
Sbjct: 2   CKTCPFYLQNVCYKTPLVENLEPHLLREKGCDYKTMNSAAQKIGGGII---IDSAVSG-W 57

Query: 217 DKKFYNQRKNRNMSSGNIMKVVELELQETEQSSVFQETEESPVFALANFEEKTPLRDKLV 276
           +KK +   K  + S+G  M ++ELELQETE   V        +  L  F ++   +   V
Sbjct: 58  NKKLFIPLKKHSTSNGKTM-ILELELQETENLEVL-------ILFLQKFWKE---KHNFV 106

Query: 277 PLSDFASPPTPSQSNQFGESYFSIDLTKSYSNSTYDHRSQVPKEGTEFVVPESIVERAEE 336
              D+ +    S ++  GE                                       EE
Sbjct: 107 IKCDYNNRSVASSNSGQGEE--------------------------------------EE 128

Query: 337 SYDVVK-WSSNSSCNSHQHLNKLHEAFFKGGLVSDYGESRHME-VMKNSKESLAKWSHED 394
              VV  W  N     H H +K++ AFF GG  SD+ ESR  + V+KN KE +AKW   D
Sbjct: 129 RIGVVNYWLKN-----HPHKDKVNAAFFNGG--SDFEESRRQKVVVKNPKERMAKWPVND 181

Query: 395 HIITKPES 402
              ++ ES
Sbjct: 182 QTTSRLES 189


>Medtr1g034960.1 | cysteine/histidine-rich C1 domain protein | HC |
           chr1:12723234-12719361 | 20130731
          Length = 313

 Score = 51.6 bits (122), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 45/185 (24%), Positives = 64/185 (34%), Gaps = 23/185 (12%)

Query: 11  VSHFSHPHPLEHXXXXXXXXXXXXCSGCKLRVTTNDNDYYRCSKTKTCNFSLHSVC-YNM 69
           + HFSHP   +H            C GCK          + C +   CN+ LH  C    
Sbjct: 67  IIHFSHP---QHPLSMVDLPDLFICVGCK---EYGSGKRFVCQQ---CNYQLHDFCALAP 117

Query: 70  PFITNHPSHPTHDXXXXXXXXXXXXXNT-CFACKNHATGLTYHCAECTIFFHXXXXXXXX 128
           P +  HP H  H               + C  C     G T+ C  C    H        
Sbjct: 118 PALKAHPFHSQHAMLFHSKPVKSGMTKSKCDVCGKPTKGYTFLCTACAFQMHPCCAMLNT 177

Query: 129 XXAIKHHPHKIKLEFLPPY-----------DFYCDFCNKPSFSGWLYRCSMCEFDIHIAC 177
                +HPH +KL                    C+ C K   SG +YRC++C +++H  C
Sbjct: 178 EIEFPNHPHTLKLTHSSTTTGTATNTDLSNTIVCNECKK-RRSGKVYRCTVCNYNLHAFC 236

Query: 178 AVDNL 182
           A + +
Sbjct: 237 AKNKV 241